RchiOBHm_Chr2g0167551

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000084
Physical Location & Seq
Forward (+)
82045672 .. 82048056
2385 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53533

Sequence Viewer

Length: 1500 bp
ATGGATGATCAATCTCAAAGAGGAATAATATCTACTGCTGAGGGCGAGAGTAAAGATTGGATAAATGAGCTTCCGGATTGCATTCTGTCATCCATACTTTCATTGTTAACAATAAAAGATGCAGCGGTGACTAGCATTGTATCTCGCCAGTGGAGGAACCTTTGGAAGACAAGGCCTCCCAATCTTGAATTAGACATTGTAAATATTTTTGGGTCCGTGTATGCTCCTCTCATTGAACCATATCGGTCCATCTTTAGTGTTACATCTTGTAGTCTTCAATTCGACAGACAGTGCTATATAAAACGAGTGAATGAAGTTTTGGAGCTCTACTCTGGCAACAAGCTAGACTCATTCAAGGTGGCATTCTTTTTTAATCGAGAATTTACTGAAGATCTTGACAAATGGGTTCGTTTTGCAATTACAAAGGGAGCTCAAAAGCTGGATCTTCAATTATTAAGAGGCGCTTTGGATCCACATGATAATTTTTATGTTTTTCCTCACTGGATCCTTGCAGATTTGAACACATCAACCTTAAAGCATTTGTCGTTGCATCGATGTGTTCTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAGAAACTCTTTCTCTGAATGACATTGTAGTTGATCCAGAATTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGGTTCACCTTGAACACATGTGACGTGCCCTCAAATCTGATTATTGGTCCATCCCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTTTACTCCCTGGAATATGATGGATATAATACAGAGATTTCTTTCATGAGAACTCCACGGCTAGCAAGATGTTTCTTTAAGGGATGGTCTATAGGTCCGGTACCTCATGTGCTAACCCAACTCCCCCTGTGTTCTGAGCTTGCGACTCTTCATCTGCAGATCAGAAATAATTTCGAACATATACCCCAAACTTTTCCAACATTGAAAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCACTTTTGGAAGAACTTATAATAACAACACGAGCTCCAGACTATCACGGAGAGATGAGGAGTCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTCGAGATAGAGTTGGCCATTTGCCTTCTTAAAATTGCTACAAAGCTTGAGGTAATGGTGATTGATCCACTTGGATCATACTATGACGGTGATGGAACGTGGGTCAAAATGACCTGTTATTATCAGGATGGGAATGAAGATGAGAACCCAGAGGAATATGATGACACAGGAGATGAAAATGTGGACAATGTGCCTTATGAACTTTTACGTTGGCAAAAAAGAGGCAGGGCAGCAGTCCAAGAAAGGCTGAAAGATGTAAAGACTGATGCTCAAGTCTTCATCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

499

Amino Acids

57.54

Weight (kDa)

5.34

Isoelectric Point (pI)

36.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 60 7.9e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 107 - 429 3.6e-41 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 132 - 288 1.7e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1106
AarI CACCTGC 1 cut(s) 747
Acc36I ACCTGC 1 cut(s) 747
Acc65I GGTACC 1 cut(s) 901
AccB1I GGYRCC 1 cut(s) 901
AccIII TCCGGA 1 cut(s) 73
AciI CCGC 1 cut(s) 125
AclWI GGATC 9 cut(s) 450, 464, 477, 499, 512, 626, 1038, 1271, 1294
AcoI YGGCCR 1 cut(s) 1227
AcsI RAATTY 2 cut(s) 380, 638
AcuI CTGAAG 1 cut(s) 408
AcvI CACGTG 1 cut(s) 762
AfaI GTAC 1 cut(s) 903
AflIII ACRYGT 2 cut(s) 695, 761
AgsI TTSAA 9 cut(s) 188, 236, 278, 355, 449, 520, 691, 1006, 1052
AjiI CACGTC 2 cut(s) 650, 703
AjnI CCWGG 1 cut(s) 810
AjuI GAANNNNNNNTTGG 2 cut(s) 302, 334
AluBI AGCT 9 cut(s) 70, 325, 343, 431, 439, 598, 940, 1121, 1258
AluI AGCT 9 cut(s) 70, 325, 343, 431, 439, 598, 940, 1121, 1258
Alw21I GWGCWC 4 cut(s) 327, 433, 759, 1123
AlwI GGATC 9 cut(s) 450, 464, 477, 499, 512, 626, 1038, 1271, 1294
Aor13HI TCCGGA 1 cut(s) 73
AoxI GGCC 2 cut(s) 173, 1227
ApeKI GCWGC 3 cut(s) 122, 1082, 1442
ApoI RAATTY 2 cut(s) 380, 638
Asp718I GGTACC 1 cut(s) 901
AspLEI GCGC 1 cut(s) 464
AspS9I GGNCC 4 cut(s) 213, 246, 725, 896
AsuHPI GGTGA 5 cut(s) 139, 676, 728, 1282, 1313
AsuII TTCGAA 1 cut(s) 975
AsuNHI GCTAGC 1 cut(s) 862
AvaII GGWCC 4 cut(s) 213, 246, 725, 896
BaeGI GKGCMC 1 cut(s) 708
BalI TGGCCA 1 cut(s) 1229
BamHI GGATCC 2 cut(s) 469, 504
BanI GGYRCC 1 cut(s) 901
BanII GRGCYC 3 cut(s) 327, 433, 1123
BauI CACGAG 1 cut(s) 1116
BbrPI CACGTG 1 cut(s) 762
BbsI GAAGAC 3 cut(s) 173, 266, 1480
Bbv12I GWGCWC 4 cut(s) 327, 433, 759, 1123
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 134, 1069, 1454
BccI CCATC 6 cut(s) 257, 736, 815, 879, 1298, 1334
BceAI ACGGC 1 cut(s) 875
BciT130I CCWGG 1 cut(s) 812
BclI TGATCA 1 cut(s) 7
BfaI CTAG 4 cut(s) 132, 344, 599, 863
BfmI CTRYAG 2 cut(s) 891, 956
BfoI RGCGCY 1 cut(s) 465
BfuAI ACCTGC 1 cut(s) 747
BglII AGATCT 1 cut(s) 391
BisI GCNGC 3 cut(s) 123, 1083, 1443
BlsI GCNGC 3 cut(s) 124, 1084, 1444
Bme1390I CCNGG 1 cut(s) 812
Bme18I GGWCC 4 cut(s) 213, 246, 725, 896
BmgBI CACGTC 2 cut(s) 650, 703
BmgT120I GGNCC 4 cut(s) 213, 246, 725, 896
BmiI GGNNCC 6 cut(s) 158, 214, 471, 506, 903, 1199
BmrFI CCNGG 1 cut(s) 812
BmsI GCATC 5 cut(s) 109, 559, 781, 1179, 1468
BmtI GCTAGC 1 cut(s) 866
BpiI GAAGAC 3 cut(s) 173, 266, 1480
BplI GAGNNNNNCTC 2 cut(s) 314, 346
BpmI CTGGAG 1 cut(s) 1107
Bpu10I CCTNAGC 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 975
BpuEI CTTGAG 3 cut(s) 1061, 1280, 1467
Bsa29I ATCGAT 1 cut(s) 553
BsaAI YACGTR 1 cut(s) 762
BsaJI CCNNGG 3 cut(s) 810, 857, 1201
BsaWI WCCGGW 2 cut(s) 73, 898
BsaXI ACNNNNNCTCC 4 cut(s) 160, 190, 1105, 1135
Bse1I ACTGG 2 cut(s) 148, 506
BseAI TCCGGA 1 cut(s) 73
BseBI CCWGG 1 cut(s) 812
BseCI ATCGAT 1 cut(s) 553
BseDI CCNNGG 3 cut(s) 810, 857, 1201
BseGI GGATG 6 cut(s) 10, 89, 728, 890, 1345, 1491
BseMII CTCAG 2 cut(s) 30, 927
BseNI ACTGG 2 cut(s) 148, 506
BseRI GAGGAG 3 cut(s) 216, 1025, 1159
BseSI GKGCMC 1 cut(s) 708
BseXI GCAGC 3 cut(s) 134, 1069, 1454
BsgI GTGCAG 1 cut(s) 1068
BshFI GGCC 2 cut(s) 175, 1229
BshNI GGYRCC 1 cut(s) 901
BshVI ATCGAT 1 cut(s) 553
BsiHKAI GWGCWC 4 cut(s) 327, 433, 759, 1123
BsiSI CCGG 2 cut(s) 74, 899
BsmI GAATGC 2 cut(s) 81, 362
BsnI GGCC 2 cut(s) 175, 1229
Bsp119I TTCGAA 1 cut(s) 975
Bsp1286I GDGCHC 5 cut(s) 327, 433, 708, 759, 1123
Bsp13I TCCGGA 1 cut(s) 73
BspACI CCGC 1 cut(s) 125
BspANI GGCC 2 cut(s) 175, 1229
BspCNI CTCAG 2 cut(s) 31, 928
BspDI ATCGAT 1 cut(s) 553
BspEI TCCGGA 1 cut(s) 73
BspHI TCATGA 1 cut(s) 846
BspLI GGNNCC 6 cut(s) 158, 214, 471, 506, 903, 1199
BspMAI CTGCAG 1 cut(s) 960
BspMI ACCTGC 1 cut(s) 747
BspOI GCTAGC 1 cut(s) 866
BspPI GGATC 9 cut(s) 450, 464, 477, 499, 512, 626, 1038, 1271, 1294
BspT104I TTCGAA 1 cut(s) 975
BspT107I GGYRCC 1 cut(s) 901
BsrI ACTGG 2 cut(s) 148, 506
BssECI CCNNGG 3 cut(s) 810, 857, 1201
BssSI CACGAG 1 cut(s) 1116
BssT1I CCWWGG 1 cut(s) 1201
Bst2BI CACGAG 1 cut(s) 1116
Bst2UI CCWGG 1 cut(s) 812
Bst4CI ACNGT 2 cut(s) 291, 1301
Bst6I CTCTTC 1 cut(s) 954
BstBAI YACGTR 1 cut(s) 762
BstBI TTCGAA 1 cut(s) 975
BstC8I GCNNGC 2 cut(s) 864, 942
BstDEI CTNAG 2 cut(s) 39, 936
BstDSI CCRYGG 1 cut(s) 857
BstF5I GGATG 6 cut(s) 10, 89, 728, 890, 1345, 1491
BstH2I RGCGCY 1 cut(s) 465
BstHHI GCGC 1 cut(s) 464
BstNI CCWGG 1 cut(s) 812
BstNSI RCATGY 1 cut(s) 699
BstSCI CCNGG 1 cut(s) 810
BstSFI CTRYAG 2 cut(s) 891, 956
BstSLI GKGCMC 1 cut(s) 708
BstV1I GCAGC 3 cut(s) 134, 1069, 1454
BstV2I GAAGAC 3 cut(s) 173, 266, 1480
BstX2I RGATCY 5 cut(s) 391, 442, 469, 504, 1030
BstYI RGATCY 5 cut(s) 391, 442, 469, 504, 1030
Bsu15I ATCGAT 1 cut(s) 553
BsuRI GGCC 2 cut(s) 175, 1229
BsuTUI ATCGAT 1 cut(s) 553
BtgI CCRYGG 1 cut(s) 857
BtrI CACGTC 2 cut(s) 650, 703
BtsCI GGATG 6 cut(s) 10, 89, 728, 890, 1345, 1491
BtsIMutI CAGTG 3 cut(s) 155, 296, 499
BveI ACCTGC 1 cut(s) 747
Cac8I GCNNGC 2 cut(s) 864, 942
CciI TCATGA 1 cut(s) 846
CfoI GCGC 1 cut(s) 464
Cfr13I GGNCC 4 cut(s) 213, 246, 725, 896
ClaI ATCGAT 1 cut(s) 553
Csp6I GTAC 1 cut(s) 902
CspCI CAANNNNNGTGG 2 cut(s) 1190, 1225
CviAII CATG 6 cut(s) 476, 696, 743, 847, 908, 1039
CviQI GTAC 1 cut(s) 902
DdeI CTNAG 2 cut(s) 39, 936
EaeI YGGCCR 1 cut(s) 1227
Eam1104I CTCTTC 1 cut(s) 954
EarI CTCTTC 1 cut(s) 954
Ecl136II GAGCTC 3 cut(s) 325, 431, 1121
Eco130I CCWWGG 1 cut(s) 1201
Eco147I AGGCCT 1 cut(s) 175
Eco24I GRGCYC 3 cut(s) 327, 433, 1123
Eco47I GGWCC 4 cut(s) 213, 246, 725, 896
Eco53kI GAGCTC 3 cut(s) 325, 431, 1121
Eco57I CTGAAG 1 cut(s) 408
Eco72I CACGTG 1 cut(s) 762
EcoICRI GAGCTC 3 cut(s) 325, 431, 1121
EcoRII CCWGG 1 cut(s) 810
EcoT14I CCWWGG 1 cut(s) 1201
EcoT38I GRGCYC 3 cut(s) 327, 433, 1123
ErhI CCWWGG 1 cut(s) 1201
FaeI CATG 6 cut(s) 479, 699, 746, 850, 911, 1042
FalI AAGNNNNNCTT 2 cut(s) 448, 480
FatI CATG 6 cut(s) 475, 695, 742, 846, 907, 1038
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 3 cut(s) 123, 1083, 1443
FokI GGATG 6 cut(s) 17, 76, 715, 897, 1352, 1478
FriOI GRGCYC 3 cut(s) 327, 433, 1123
Fsp4HI GCNGC 3 cut(s) 123, 1083, 1443
FspBI CTAG 4 cut(s) 132, 344, 599, 863
GlaI GCGC 1 cut(s) 463
GluI GCNGC 3 cut(s) 123, 1083, 1443
GsuI CTGGAG 1 cut(s) 1107
HaeII RGCGCY 1 cut(s) 465
HaeIII GGCC 2 cut(s) 175, 1229
HapII CCGG 2 cut(s) 74, 899
HhaI GCGC 1 cut(s) 464
Hin1II CATG 6 cut(s) 479, 699, 746, 850, 911, 1042
Hin6I GCGC 1 cut(s) 462
HinP1I GCGC 1 cut(s) 462
HincII GTYRAC 1 cut(s) 108
HindII GTYRAC 1 cut(s) 108
HindIII AAGCTT 1 cut(s) 1256
HinfI GANTC 4 cut(s) 347, 588, 946, 1147
HpaI GTTAAC 1 cut(s) 108
HpaII CCGG 2 cut(s) 74, 899
HphI GGTGA 5 cut(s) 139, 676, 728, 1282, 1313
Hpy166II GTNNAC 3 cut(s) 108, 684, 1396
Hpy188I TCNGA 5 cut(s) 615, 717, 750, 937, 965
Hpy8I GTNNAC 3 cut(s) 108, 684, 1396
HpyAV CCTTC 2 cut(s) 743, 1247
HpyCH4III ACNGT 2 cut(s) 291, 1301
HpyCH4IV ACGT 5 cut(s) 649, 702, 761, 1310, 1420
HpyF3I CTNAG 2 cut(s) 39, 936
HpySE526I ACGT 5 cut(s) 649, 702, 761, 1310, 1420
Hsp92II CATG 6 cut(s) 479, 699, 746, 850, 911, 1042
HspAI GCGC 1 cut(s) 462
Kpn2I TCCGGA 1 cut(s) 73
KpnI GGTACC 1 cut(s) 905
Ksp22I TGATCA 1 cut(s) 7
KspAI GTTAAC 1 cut(s) 108
LmnI GCTCC 4 cut(s) 229, 322, 428, 1126
Lsp1109I GCAGC 3 cut(s) 134, 1069, 1454
LweI GCATC 5 cut(s) 109, 559, 781, 1179, 1468
MaeI CTAG 4 cut(s) 132, 344, 599, 863
MaeII ACGT 5 cut(s) 649, 702, 761, 1310, 1420
MaeIII GTNAC 4 cut(s) 127, 259, 698, 764
MboII GAAGA 9 cut(s) 178, 266, 401, 437, 789, 941, 1109, 1361, 1480
MflI RGATCY 5 cut(s) 391, 442, 469, 504, 1030
MhlI GDGCHC 5 cut(s) 327, 433, 708, 759, 1123
MlsI TGGCCA 1 cut(s) 1229
MluCI AATT 9 cut(s) 188, 278, 380, 417, 449, 481, 638, 970, 1245
MluNI TGGCCA 1 cut(s) 1229
MlyI GAGTC 3 cut(s) 341, 940, 1156
MmeI TCCRAC 2 cut(s) 1008, 1022
Mox20I TGGCCA 1 cut(s) 1229
MroI TCCGGA 1 cut(s) 73
MscI TGGCCA 1 cut(s) 1229
MseI TTAA 6 cut(s) 107, 372, 455, 533, 879, 1242
MslI CAYNNNNRTG 2 cut(s) 555, 741
Msp20I TGGCCA 1 cut(s) 1229
MspA1I CMGCKG 1 cut(s) 125
MspI CCGG 2 cut(s) 74, 899
MspR9I CCNGG 1 cut(s) 812
Mva1269I GAATGC 2 cut(s) 81, 362
MvaI CCWGG 1 cut(s) 812
NheI GCTAGC 1 cut(s) 862
NlaIII CATG 6 cut(s) 479, 699, 746, 850, 911, 1042
NlaIV GGNNCC 6 cut(s) 158, 214, 471, 506, 903, 1199
NmuCI GTSAC 2 cut(s) 127, 698
NspI RCATGY 1 cut(s) 699
NspV TTCGAA 1 cut(s) 975
PagI TCATGA 1 cut(s) 846
PaqCI CACCTGC 1 cut(s) 747
PceI AGGCCT 1 cut(s) 175
PciI ACATGT 1 cut(s) 695
PctI GAATGC 2 cut(s) 81, 362
PfeI GAWTC 1 cut(s) 588
PkrI GCNGC 3 cut(s) 124, 1084, 1444
PleI GAGTC 3 cut(s) 341, 940, 1155
PmaCI CACGTG 1 cut(s) 762
PmlI CACGTG 1 cut(s) 762
PpsI GAGTC 3 cut(s) 341, 940, 1155
Ppu21I YACGTR 1 cut(s) 762
PscI ACATGT 1 cut(s) 695
PsiI TTATAA 1 cut(s) 1106
Psp124BI GAGCTC 3 cut(s) 327, 433, 1123
Psp6I CCWGG 1 cut(s) 810
PspCI CACGTG 1 cut(s) 762
PspGI CCWGG 1 cut(s) 810
PspN4I GGNNCC 6 cut(s) 158, 214, 471, 506, 903, 1199
PspPI GGNCC 4 cut(s) 213, 246, 725, 896
PstI CTGCAG 1 cut(s) 960
PsuI RGATCY 5 cut(s) 391, 442, 469, 504, 1030
RsaI GTAC 1 cut(s) 903
RsaNI GTAC 1 cut(s) 902
RseI CAYNNNNRTG 2 cut(s) 555, 741
SacI GAGCTC 3 cut(s) 327, 433, 1123
SaqAI TTAA 6 cut(s) 107, 372, 455, 533, 879, 1242
SatI GCNGC 3 cut(s) 123, 1083, 1443
Sau96I GGNCC 4 cut(s) 213, 246, 725, 896
SchI GAGTC 3 cut(s) 341, 940, 1156
ScrFI CCNGG 1 cut(s) 812
SduI GDGCHC 5 cut(s) 327, 433, 708, 759, 1123
SfaNI GCATC 5 cut(s) 109, 559, 781, 1179, 1468
SfcI CTRYAG 2 cut(s) 891, 956
SfuI TTCGAA 1 cut(s) 975
SinI GGWCC 4 cut(s) 213, 246, 725, 896
SmiMI CAYNNNNRTG 2 cut(s) 555, 741
SmlI CTYRAG 3 cut(s) 1076, 1259, 1482
SmoI CTYRAG 3 cut(s) 1076, 1259, 1482
Sse9I AATT 9 cut(s) 188, 278, 380, 417, 449, 481, 638, 970, 1245
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 1 cut(s) 125
SspI AATATT 2 cut(s) 205, 1072
SspMI CTAG 4 cut(s) 132, 344, 599, 863
SstI GAGCTC 3 cut(s) 327, 433, 1123
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 1 cut(s) 810
StyI CCWWGG 1 cut(s) 1201
TaaI ACNGT 2 cut(s) 291, 1301
TaiI ACGT 5 cut(s) 652, 705, 764, 1313, 1423
TaqI TCGA 6 cut(s) 282, 376, 553, 675, 975, 1215
TaqII GACCGA 1 cut(s) 234
TasI AATT 9 cut(s) 188, 278, 380, 417, 449, 481, 638, 970, 1245
TfiI GAWTC 1 cut(s) 588
Tru1I TTAA 6 cut(s) 107, 372, 455, 533, 879, 1242
Tru9I TTAA 6 cut(s) 107, 372, 455, 533, 879, 1242
TscAI CASTG 3 cut(s) 155, 296, 506
TseFI GTSAC 2 cut(s) 127, 698
TseI GCWGC 3 cut(s) 122, 1082, 1442
Tsp45I GTSAC 2 cut(s) 127, 698
TspDTI ATGAA 9 cut(s) 90, 327, 580, 835, 941, 1362, 1401, 1425, 1480
TspGWI ACGGA 2 cut(s) 205, 1149
TspRI CASTG 3 cut(s) 155, 296, 506
VpaK11BI GGWCC 4 cut(s) 213, 246, 725, 896
XapI RAATTY 2 cut(s) 380, 638
XceI RCATGY 1 cut(s) 699
XspI CTAG 4 cut(s) 132, 344, 599, 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.