Prupe.3G259300_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000084
Physical Location & Seq
Reverse (-)
24591944 .. 24594576
2633 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G259300.1

Sequence Viewer

Length: 1365 bp
ATGAAGCTAAGGGAGGAGGCTTTTGGAGATGATAAGCCAATTAGATTCCAAGTTCTTAGATCAGTCTTAGCTGAAACTTACTTAGCCATCGTGGAAAACATTGAGGCTGAAAATGCAAGTTCCGGAAGGAGTGATTTCATCAGATATCCCCAAAATCCACCCTACGATCCTCCTCCGGTGGTTATAACTCGAAACTTCGAGGAATTTAAAGATGCACTCAAAACACATGGGACGTATATGGAGATAAACGTTCCTGTTGATGTGCATCCATACATACATACGTCAACGTGTATTCCTGTAACGGAGATTGAGAGCAAGAATTGGATTAATGAACTTCCTGAAAGCGTTCTTTCATTCATACTTTCATTCTTAACCATAAAAGAAGCAGCCGGTACAAGCATGATCTGCCGCCGGTGGAGGCACCGGCAGCTCTGGTTGGATCACATACTAACAAGACGAGACCTCGAATTCAATATTCCAAACATTTTTGGAAGCAATTATTTGAAGTGCAGATCTTCACTTATTTCGGACTTCGAGGATGAACGACTATTATTTTTTCCAATCATAATTGGCCACATCATCAACTCTAAAGCATTTGAGGTTGAGCAGATAACTCTTTATCTGGAAAGGGTCACTGTGGATGAAGTTTTTATGGCAAGTATGTTCTCTATTTGTTTGTTCCTTGAAAGCTTGAGCTTACTTGGCTGCAGCATTGACTCATCTCTGATTGTTGATGGCCCATCACTTCGTTTAGATGATTTAAAAGTGCTCAACTGTTTTAATGATCCAGCAAATATCAAGATTTCTGCAGTAAATCTTGCATCCTTTGAATACAGTGGAAATATTCATCACATCTCTTCCATCAAAACTCCAAGATTATCAAGAATATATTTTAATAACCACAAGGTACAAAATGCATTCCCTCATGCACTGACCCGATTGGCATCCTTTCCTCAGCTCGTAAAGGAACTACCAGAAAGCTTACCAACATTTAGAAACCTCAAGCAACTGGAATTGGTTGTCCATGGGCCTGAAAAAAGTAGCAAGGACAATGAACTCGTGTGGGTTCTAAAGTTTCTCAAGGCAACACCTCTTCTGCAAGAACCTGCGATAACGTTGAAAAGAGTTACTATCAACATGGTTCAAGGTAACTGGTACGAGGTAGAGCTTGCTATCTGTGTTCTGATACTGGTGACGAAGCTGGAGAAGATGGTAATCGATCCATTTGGGAAACTCTATTATGATGGTGAGTGGAGTTGGACCAATGACGATGCTTCAGATTCACCTTGGGTTGAAAAACGTTGCCCTTTTGTCTGTCAACAGCTAAAGGAAGTGAAGATTGATGCTCAAGTTATAATTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FBD

Protein Analysis

455

Amino Acids

52.18

Weight (kDa)

5.57

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 185, 1355
Acc36I ACCTGC 1 cut(s) 1114
AccB1I GGYRCC 1 cut(s) 420
AccIII TCCGGA 1 cut(s) 122
AciI CCGC 1 cut(s) 409
AclI AACGTT 3 cut(s) 249, 1115, 1300
AclWI GGATC 4 cut(s) 161, 447, 779, 1214
AcoI YGGCCR 1 cut(s) 571
AcsI RAATTY 2 cut(s) 203, 467
AcuI CTGAAG 1 cut(s) 1260
AfaI GTAC 3 cut(s) 394, 909, 1157
AflIII ACRYGT 1 cut(s) 287
AgsI TTSAA 7 cut(s) 472, 505, 686, 830, 1120, 1145, 1295
Alw21I GWGCWC 1 cut(s) 771
Alw26I GTCTC 1 cut(s) 453
AlwI GGATC 4 cut(s) 161, 447, 779, 1214
Aor13HI TCCGGA 1 cut(s) 122
AoxI GGCC 3 cut(s) 571, 736, 1028
ApeKI GCWGC 4 cut(s) 386, 427, 705, 708
ApoI RAATTY 2 cut(s) 203, 467
AseI ATTAAT 1 cut(s) 327
Asp700I GAANNNNTTC 1 cut(s) 345
AspS9I GGNCC 3 cut(s) 737, 1028, 1260
AsuHPI GGTGA 3 cut(s) 1204, 1259, 1275
AvaII GGWCC 1 cut(s) 1260
BalI TGGCCA 1 cut(s) 573
BanI GGYRCC 1 cut(s) 420
BauI CACGAG 1 cut(s) 1058
Bbv12I GWGCWC 1 cut(s) 771
BbvCI CCTCAGC 1 cut(s) 954
BbvI GCAGC 4 cut(s) 398, 439, 692, 720
BccI CCATC 6 cut(s) 95, 728, 748, 869, 1204, 1238
BcoDI GTCTC 1 cut(s) 453
BfmI CTRYAG 2 cut(s) 706, 807
BfuAI ACCTGC 1 cut(s) 1114
BglII AGATCT 1 cut(s) 512
BisI GCNGC 5 cut(s) 387, 409, 428, 706, 709
BlsI GCNGC 5 cut(s) 388, 410, 429, 707, 710
Bme18I GGWCC 1 cut(s) 1260
BmgT120I GGNCC 3 cut(s) 737, 1028, 1260
BmiI GGNNCC 1 cut(s) 422
BmsI GCATC 6 cut(s) 202, 274, 830, 953, 1261, 1333
BpmI CTGGAG 1 cut(s) 1223
Bpu10I CCTNAGC 2 cut(s) 8, 954
BpuEI CTTGAG 4 cut(s) 712, 986, 1064, 1332
Bsa29I ATCGAT 1 cut(s) 1218
BsaBI GATNNNNATC 3 cut(s) 264, 943, 1214
BsaI GGTCTC 1 cut(s) 453
BsaJI CCNNGG 2 cut(s) 1024, 1286
BsaWI WCCGGW 2 cut(s) 122, 175
Bse118I RCCGGY 3 cut(s) 389, 411, 423
Bse1I ACTGG 3 cut(s) 1014, 1157, 1194
Bse8I GATNNNNATC 3 cut(s) 264, 943, 1214
BseAI TCCGGA 1 cut(s) 122
BseCI ATCGAT 1 cut(s) 1218
BseDI CCNNGG 2 cut(s) 1024, 1286
BseGI GGATG 5 cut(s) 265, 544, 646, 821, 944
BseJI GATNNNNATC 3 cut(s) 264, 943, 1214
BseMII CTCAG 1 cut(s) 968
BseNI ACTGG 3 cut(s) 1014, 1157, 1194
BseRI GAGGAG 2 cut(s) 29, 162
BseXI GCAGC 4 cut(s) 398, 439, 692, 720
BsgI GTGCAG 1 cut(s) 529
BshFI GGCC 3 cut(s) 573, 738, 1030
BshNI GGYRCC 1 cut(s) 420
BshVI ATCGAT 1 cut(s) 1218
BsiHKAI GWGCWC 1 cut(s) 771
BsiSI CCGG 5 cut(s) 123, 176, 390, 412, 424
BslFI GGGAC 1 cut(s) 244
BsmAI GTCTC 1 cut(s) 453
BsmFI GGGAC 1 cut(s) 244
BsmI GAATGC 1 cut(s) 917
BsnI GGCC 3 cut(s) 573, 738, 1030
Bso31I GGTCTC 1 cut(s) 453
Bsp1286I GDGCHC 1 cut(s) 771
Bsp13I TCCGGA 1 cut(s) 122
Bsp143I GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
Bsp19I CCATGG 1 cut(s) 1024
BspACI CCGC 1 cut(s) 409
BspANI GGCC 3 cut(s) 573, 738, 1030
BspCNI CTCAG 1 cut(s) 967
BspDI ATCGAT 1 cut(s) 1218
BspEI TCCGGA 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 422
BspMAI CTGCAG 2 cut(s) 710, 811
BspMI ACCTGC 1 cut(s) 1114
BspPI GGATC 4 cut(s) 161, 447, 779, 1214
BspT107I GGYRCC 1 cut(s) 420
BspTNI GGTCTC 1 cut(s) 453
BsrFI RCCGGY 3 cut(s) 389, 411, 423
BsrI ACTGG 3 cut(s) 1014, 1157, 1194
BssAI RCCGGY 3 cut(s) 389, 411, 423
BssECI CCNNGG 2 cut(s) 1024, 1286
BssMI GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
BssSI CACGAG 1 cut(s) 1058
BssT1I CCWWGG 2 cut(s) 1024, 1286
Bst2BI CACGAG 1 cut(s) 1058
Bst4CI ACNGT 3 cut(s) 637, 776, 836
Bst6I CTCTTC 2 cut(s) 862, 1098
BstAPI GCANNNNNTGC 1 cut(s) 405
BstC8I GCNNGC 1 cut(s) 1170
BstDEI CTNAG 5 cut(s) 8, 56, 67, 82, 954
BstDSI CCRYGG 1 cut(s) 1024
BstF5I GGATG 5 cut(s) 265, 544, 646, 821, 944
BstKTI GATC 7 cut(s) 62, 169, 405, 442, 515, 787, 1222
BstMAI GTCTC 1 cut(s) 453
BstMBI GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
BstMWI GCNNNNNNNGC 4 cut(s) 113, 405, 427, 702
BstSFI CTRYAG 2 cut(s) 706, 807
BstV1I GCAGC 4 cut(s) 398, 439, 692, 720
BstX2I RGATCY 1 cut(s) 512
BstYI RGATCY 1 cut(s) 512
Bsu15I ATCGAT 1 cut(s) 1218
BsuRI GGCC 3 cut(s) 573, 738, 1030
BsuTUI ATCGAT 1 cut(s) 1218
BtgI CCRYGG 1 cut(s) 1024
BtsCI GGATG 5 cut(s) 265, 544, 646, 821, 944
BtsIMutI CAGTG 3 cut(s) 633, 841, 929
BveI ACCTGC 1 cut(s) 1114
Cac8I GCNNGC 1 cut(s) 1170
Cfr10I RCCGGY 3 cut(s) 389, 411, 423
Cfr13I GGNCC 3 cut(s) 737, 1028, 1260
ClaI ATCGAT 1 cut(s) 1218
Csp6I GTAC 3 cut(s) 393, 908, 1156
CviAII CATG 5 cut(s) 227, 400, 926, 1025, 1138
CviQI GTAC 3 cut(s) 393, 908, 1156
DdeI CTNAG 5 cut(s) 8, 56, 67, 82, 954
DpnI GATC 7 cut(s) 61, 168, 404, 441, 514, 786, 1221
DpnII GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
DraI TTTAAA 2 cut(s) 208, 762
EaeI YGGCCR 1 cut(s) 571
Eam1104I CTCTTC 2 cut(s) 862, 1098
EarI CTCTTC 2 cut(s) 862, 1098
Eco130I CCWWGG 2 cut(s) 1024, 1286
Eco31I GGTCTC 1 cut(s) 453
Eco32I GATATC 1 cut(s) 146
Eco47I GGWCC 1 cut(s) 1260
Eco57I CTGAAG 1 cut(s) 1260
EcoRI GAATTC 1 cut(s) 467
EcoRV GATATC 1 cut(s) 146
EcoT14I CCWWGG 2 cut(s) 1024, 1286
EcoT22I ATGCAT 1 cut(s) 919
ErhI CCWWGG 2 cut(s) 1024, 1286
FaeI CATG 5 cut(s) 230, 403, 929, 1028, 1141
FaqI GGGAC 1 cut(s) 244
FatI CATG 5 cut(s) 226, 399, 925, 1024, 1137
Fnu4HI GCNGC 5 cut(s) 387, 409, 428, 706, 709
FokI GGATG 5 cut(s) 252, 551, 653, 808, 931
Fsp4HI GCNGC 5 cut(s) 387, 409, 428, 706, 709
GluI GCNGC 5 cut(s) 387, 409, 428, 706, 709
GsuI CTGGAG 1 cut(s) 1223
HaeIII GGCC 3 cut(s) 573, 738, 1030
HapII CCGG 5 cut(s) 123, 176, 390, 412, 424
Hin1II CATG 5 cut(s) 230, 403, 929, 1028, 1141
HincII GTYRAC 2 cut(s) 285, 1319
HindII GTYRAC 2 cut(s) 285, 1319
HindIII AAGCTT 2 cut(s) 688, 979
HinfI GANTC 3 cut(s) 45, 716, 1280
HpaII CCGG 5 cut(s) 123, 176, 390, 412, 424
HphI GGTGA 3 cut(s) 1204, 1259, 1275
Hpy166II GTNNAC 2 cut(s) 285, 1319
Hpy188I TCNGA 5 cut(s) 143, 529, 726, 1185, 1279
Hpy188III TCNNGA 5 cut(s) 123, 338, 623, 799, 882
Hpy8I GTNNAC 2 cut(s) 285, 1319
HpyAV CCTTC 1 cut(s) 120
HpyCH4III ACNGT 3 cut(s) 637, 776, 836
HpyCH4IV ACGT 6 cut(s) 233, 249, 281, 287, 1115, 1300
HpyF10VI GCNNNNNNNGC 4 cut(s) 113, 405, 427, 702
HpyF3I CTNAG 5 cut(s) 8, 56, 67, 82, 954
HpySE526I ACGT 6 cut(s) 233, 249, 281, 287, 1115, 1300
Hsp92II CATG 5 cut(s) 230, 403, 929, 1028, 1141
Kpn2I TCCGGA 1 cut(s) 122
Kzo9I GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
Lsp1109I GCAGC 4 cut(s) 398, 439, 692, 720
LweI GCATC 6 cut(s) 202, 274, 830, 953, 1261, 1333
MaeII ACGT 6 cut(s) 233, 249, 281, 287, 1115, 1300
MaeIII GTNAC 5 cut(s) 298, 631, 1126, 1148, 1192
MalI GATC 7 cut(s) 61, 168, 404, 441, 514, 786, 1221
MboI GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
MboII GAAGA 5 cut(s) 507, 849, 1085, 1219, 1348
MflI RGATCY 1 cut(s) 512
MhlI GDGCHC 1 cut(s) 771
MlsI TGGCCA 1 cut(s) 573
MluCI AATT 8 cut(s) 39, 203, 319, 467, 496, 567, 1013, 1356
MluNI TGGCCA 1 cut(s) 573
MlyI GAGTC 1 cut(s) 710
MmeI TCCRAC 2 cut(s) 417, 1238
Mox20I TGGCCA 1 cut(s) 573
Mph1103I ATGCAT 1 cut(s) 919
MroI TCCGGA 1 cut(s) 122
MroXI GAANNNNTTC 1 cut(s) 345
MscI TGGCCA 1 cut(s) 573
MseI TTAA 6 cut(s) 207, 327, 371, 761, 780, 894
Msp20I TGGCCA 1 cut(s) 573
MspI CCGG 5 cut(s) 123, 176, 390, 412, 424
Mva1269I GAATGC 1 cut(s) 917
MwoI GCNNNNNNNGC 4 cut(s) 113, 405, 427, 702
NcoI CCATGG 1 cut(s) 1024
NdeII GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
NlaIII CATG 5 cut(s) 230, 403, 929, 1028, 1141
NlaIV GGNNCC 1 cut(s) 422
NmuCI GTSAC 2 cut(s) 631, 1192
NsiI ATGCAT 1 cut(s) 919
PctI GAATGC 1 cut(s) 917
PdmI GAANNNNTTC 1 cut(s) 345
PfeI GAWTC 2 cut(s) 45, 1280
PkrI GCNGC 5 cut(s) 388, 410, 429, 707, 710
PleI GAGTC 1 cut(s) 710
PpsI GAGTC 1 cut(s) 710
PshBI ATTAAT 1 cut(s) 327
PsiI TTATAA 2 cut(s) 185, 1355
Psp1406I AACGTT 3 cut(s) 249, 1115, 1300
PspN4I GGNNCC 1 cut(s) 422
PspPI GGNCC 3 cut(s) 737, 1028, 1260
PstI CTGCAG 2 cut(s) 710, 811
PsuI RGATCY 1 cut(s) 512
RsaI GTAC 3 cut(s) 394, 909, 1157
RsaNI GTAC 3 cut(s) 393, 908, 1156
SaqAI TTAA 6 cut(s) 207, 327, 371, 761, 780, 894
SatI GCNGC 5 cut(s) 387, 409, 428, 706, 709
Sau3AI GATC 7 cut(s) 59, 166, 402, 439, 512, 784, 1219
Sau96I GGNCC 3 cut(s) 737, 1028, 1260
SchI GAGTC 1 cut(s) 710
SduI GDGCHC 1 cut(s) 771
SfaNI GCATC 6 cut(s) 202, 274, 830, 953, 1261, 1333
SfcI CTRYAG 2 cut(s) 706, 807
SgrAI CRCCGGYG 1 cut(s) 411
SinI GGWCC 1 cut(s) 1260
SmlI CTYRAG 4 cut(s) 691, 1001, 1079, 1347
SmoI CTYRAG 4 cut(s) 691, 1001, 1079, 1347
Sse9I AATT 8 cut(s) 39, 203, 319, 467, 496, 567, 1013, 1356
SsiI CCGC 1 cut(s) 409
SspI AATATT 2 cut(s) 475, 844
StyI CCWWGG 2 cut(s) 1024, 1286
TaaI ACNGT 3 cut(s) 637, 776, 836
TaiI ACGT 6 cut(s) 236, 252, 284, 290, 1118, 1303
TaqI TCGA 5 cut(s) 190, 198, 465, 534, 1218
TasI AATT 8 cut(s) 39, 203, 319, 467, 496, 567, 1013, 1356
TauI GCSGC 1 cut(s) 411
TfiI GAWTC 2 cut(s) 45, 1280
Tru1I TTAA 6 cut(s) 207, 327, 371, 761, 780, 894
Tru9I TTAA 6 cut(s) 207, 327, 371, 761, 780, 894
TscAI CASTG 3 cut(s) 640, 841, 936
TseFI GTSAC 2 cut(s) 631, 1192
TseI GCWGC 4 cut(s) 386, 427, 705, 708
Tsp45I GTSAC 2 cut(s) 631, 1192
TspGWI ACGGA 1 cut(s) 317
TspRI CASTG 3 cut(s) 640, 841, 936
VpaK11BI GGWCC 1 cut(s) 1260
VspI ATTAAT 1 cut(s) 327
XapI RAATTY 2 cut(s) 203, 467
XmnI GAANNNNTTC 1 cut(s) 345
Zsp2I ATGCAT 1 cut(s) 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.