RchiOBHm_Chr2g0167601

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000084
Physical Location & Seq
Forward (+)
82055499 .. 82057540
2042 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53538

Sequence Viewer

Length: 1317 bp
ATGGATGATCAATCTCAAAGAGGAATAATATCTACAGCTGAGGGCGAGAGTAAAGATTGGATAAATGAGCTTCCGGATTGCATTCTGTCATCCATACTTTCATTGTTAACAATAAAAGATGCAGCGGTGACTAGCATTGTATCTCGCCAGTGGAGGAACCTTTGGAAGACAAGGCCTCCCAATCTTGAATTAGACATTGTAAATATTTTTGGGTCCGTGTATGCTCCTCTCATTGAACCATATCGGTCCATCTTGAGTGTTACATCTTGTAGTCTTCAATTCGACAGACAGTGCTATATAAAACGAGTGAATGAAGTTTTGGAGCTCTACTCTGGCAACAAGCTAGACTCATTCAAAGTGGCATTCTTTTTAATCGAGAATTTACTGAAGATCTTGATAAATGGATTCATTCAGCTAGAAACTCTTTCTCTGAATGACGTTGAAGTCGATCCAGAATTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGGTTCACCTTGAACACATGTGACGTGCGCTCAAATCTGATTATTGGTCCATCCCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTTTACTCCCTGGAATATGATGGATATAATACGGAGATTTCTTTCATGAGAACTCCACGGCTAGCAAGATGTTTTTTTAAGGGATGGTCTATAGGTCCGGTACCTCATGTGCTAACCCAACTCCCCCTGTATTCTGAGCTTGCGACTCTTCATCTGCAGATCAGAAATAATTTCGAACATATACCCCAAACTTTTCCAACATTGAAAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCACTTTTGGAAGAACTTATAATAACAACACGAGCTCCAGACTATCACGGAGAGATGAGGAATCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTCAAGATAGAGTTGGCCATTTGCCTTCTTAAAATTGCTACAAAGCTTGAGGTAATGGTGATTGATCCACTTGGATCATACTATGTCGGTGATGGAAGGTGGGTCAAAATGACCTGTTGTTATCAGGATGGGAATGAAGATGAGAACCCAGAGGAATATGATGACCCAGGAGATGAAAATGTGGACAATGTGCCTTATGAACTTTTACGTTGGCAAAATAGAGGCAGGGCAGCAGTCCAAGAAAGGCTGAAAGATGTAAAGACTGATGCTCAAGTCTTCATCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

438

Amino Acids

50.35

Weight (kDa)

5.28

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 60 6.6e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 134 - 370 2.9e-26 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 923
AarI CACCTGC 1 cut(s) 564
AasI GACNNNNNNGTC 1 cut(s) 443
Acc36I ACCTGC 1 cut(s) 564
Acc65I GGTACC 1 cut(s) 718
AccB1I GGYRCC 1 cut(s) 718
AccIII TCCGGA 1 cut(s) 73
AciI CCGC 1 cut(s) 125
AclWI GGATC 4 cut(s) 443, 855, 1088, 1111
AcoI YGGCCR 1 cut(s) 1044
AcsI RAATTY 2 cut(s) 379, 455
AcuI CTGAAG 1 cut(s) 407
AcvI CACGTG 1 cut(s) 579
AfaI GTAC 1 cut(s) 720
AflIII ACRYGT 2 cut(s) 512, 578
AgsI TTSAA 9 cut(s) 188, 236, 278, 355, 443, 508, 823, 869, 1033
AjiI CACGTC 2 cut(s) 467, 520
AjnI CCWGG 2 cut(s) 627, 1195
AjuI GAANNNNNNNTTGG 2 cut(s) 302, 334
AluBI AGCT 8 cut(s) 38, 70, 325, 343, 415, 757, 938, 1075
AluI AGCT 8 cut(s) 38, 70, 325, 343, 415, 757, 938, 1075
Alw21I GWGCWC 3 cut(s) 327, 576, 940
AlwI GGATC 4 cut(s) 443, 855, 1088, 1111
Aor13HI TCCGGA 1 cut(s) 73
AoxI GGCC 2 cut(s) 173, 1044
ApeKI GCWGC 3 cut(s) 122, 899, 1259
ApoI RAATTY 2 cut(s) 379, 455
Asp718I GGTACC 1 cut(s) 718
AspLEI GCGC 1 cut(s) 525
AspS9I GGNCC 4 cut(s) 213, 246, 542, 713
AsuHPI GGTGA 5 cut(s) 139, 493, 545, 1099, 1130
AsuII TTCGAA 1 cut(s) 792
AsuNHI GCTAGC 1 cut(s) 679
AvaII GGWCC 4 cut(s) 213, 246, 542, 713
BalI TGGCCA 1 cut(s) 1046
BanI GGYRCC 1 cut(s) 718
BanII GRGCYC 2 cut(s) 327, 940
BauI CACGAG 1 cut(s) 933
BbrPI CACGTG 1 cut(s) 579
BbsI GAAGAC 3 cut(s) 173, 266, 1297
Bbv12I GWGCWC 3 cut(s) 327, 576, 940
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 134, 886, 1271
BccI CCATC 6 cut(s) 257, 553, 632, 696, 1115, 1151
BceAI ACGGC 1 cut(s) 692
BciT130I CCWGG 2 cut(s) 629, 1197
BclI TGATCA 1 cut(s) 7
BfaI CTAG 4 cut(s) 132, 344, 416, 680
BfmI CTRYAG 3 cut(s) 33, 708, 773
BfuAI ACCTGC 1 cut(s) 564
BglII AGATCT 1 cut(s) 390
BisI GCNGC 3 cut(s) 123, 900, 1260
BlsI GCNGC 3 cut(s) 124, 901, 1261
Bme1390I CCNGG 2 cut(s) 629, 1197
Bme18I GGWCC 4 cut(s) 213, 246, 542, 713
BmgBI CACGTC 2 cut(s) 467, 520
BmgT120I GGNCC 4 cut(s) 213, 246, 542, 713
BmiI GGNNCC 4 cut(s) 158, 214, 720, 1016
BmrFI CCNGG 2 cut(s) 629, 1197
BmsI GCATC 4 cut(s) 109, 598, 996, 1285
BmtI GCTAGC 1 cut(s) 683
BpiI GAAGAC 3 cut(s) 173, 266, 1297
BplI GAGNNNNNCTC 2 cut(s) 314, 346
BpmI CTGGAG 1 cut(s) 924
Bpu10I CCTNAGC 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 792
BpuEI CTTGAG 4 cut(s) 274, 878, 1097, 1284
BsaAI YACGTR 1 cut(s) 579
BsaJI CCNNGG 4 cut(s) 627, 674, 1018, 1195
BsaWI WCCGGW 2 cut(s) 73, 715
BsaXI ACNNNNNCTCC 4 cut(s) 160, 190, 922, 952
Bse1I ACTGG 1 cut(s) 148
BseAI TCCGGA 1 cut(s) 73
BseBI CCWGG 2 cut(s) 629, 1197
BseDI CCNNGG 4 cut(s) 627, 674, 1018, 1195
BseGI GGATG 6 cut(s) 10, 89, 545, 707, 1162, 1308
BseMII CTCAG 2 cut(s) 30, 744
BseNI ACTGG 1 cut(s) 148
BseRI GAGGAG 2 cut(s) 216, 842
BseXI GCAGC 3 cut(s) 134, 886, 1271
BsgI GTGCAG 1 cut(s) 885
BshFI GGCC 2 cut(s) 175, 1046
BshNI GGYRCC 1 cut(s) 718
BsiHKAI GWGCWC 3 cut(s) 327, 576, 940
BsiSI CCGG 2 cut(s) 74, 716
BsmI GAATGC 2 cut(s) 81, 362
BsnI GGCC 2 cut(s) 175, 1046
Bsp119I TTCGAA 1 cut(s) 792
Bsp1286I GDGCHC 3 cut(s) 327, 576, 940
Bsp13I TCCGGA 1 cut(s) 73
Bsp143I GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
BspACI CCGC 1 cut(s) 125
BspANI GGCC 2 cut(s) 175, 1046
BspCNI CTCAG 2 cut(s) 31, 745
BspEI TCCGGA 1 cut(s) 73
BspHI TCATGA 1 cut(s) 663
BspLI GGNNCC 4 cut(s) 158, 214, 720, 1016
BspMAI CTGCAG 1 cut(s) 777
BspMI ACCTGC 1 cut(s) 564
BspOI GCTAGC 1 cut(s) 683
BspPI GGATC 4 cut(s) 443, 855, 1088, 1111
BspT104I TTCGAA 1 cut(s) 792
BspT107I GGYRCC 1 cut(s) 718
BsrI ACTGG 1 cut(s) 148
BssECI CCNNGG 4 cut(s) 627, 674, 1018, 1195
BssMI GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
BssSI CACGAG 1 cut(s) 933
BssT1I CCWWGG 1 cut(s) 1018
Bst2BI CACGAG 1 cut(s) 933
Bst2UI CCWGG 2 cut(s) 629, 1197
Bst4CI ACNGT 1 cut(s) 291
Bst6I CTCTTC 1 cut(s) 771
BstBAI YACGTR 1 cut(s) 579
BstBI TTCGAA 1 cut(s) 792
BstC8I GCNNGC 2 cut(s) 681, 759
BstDEI CTNAG 2 cut(s) 39, 753
BstDSI CCRYGG 1 cut(s) 674
BstF5I GGATG 6 cut(s) 10, 89, 545, 707, 1162, 1308
BstHHI GCGC 1 cut(s) 525
BstKTI GATC 8 cut(s) 10, 393, 451, 565, 780, 850, 1096, 1106
BstMBI GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
BstNI CCWGG 2 cut(s) 629, 1197
BstNSI RCATGY 1 cut(s) 516
BstSCI CCNGG 2 cut(s) 627, 1195
BstSFI CTRYAG 3 cut(s) 33, 708, 773
BstV1I GCAGC 3 cut(s) 134, 886, 1271
BstV2I GAAGAC 3 cut(s) 173, 266, 1297
BstX2I RGATCY 2 cut(s) 390, 847
BstYI RGATCY 2 cut(s) 390, 847
BsuRI GGCC 2 cut(s) 175, 1046
BtgI CCRYGG 1 cut(s) 674
BtrI CACGTC 2 cut(s) 467, 520
BtsCI GGATG 6 cut(s) 10, 89, 545, 707, 1162, 1308
BtsIMutI CAGTG 2 cut(s) 155, 296
BveI ACCTGC 1 cut(s) 564
Cac8I GCNNGC 2 cut(s) 681, 759
CciI TCATGA 1 cut(s) 663
CfoI GCGC 1 cut(s) 525
Cfr13I GGNCC 4 cut(s) 213, 246, 542, 713
Csp6I GTAC 1 cut(s) 719
CspCI CAANNNNNGTGG 2 cut(s) 1007, 1042
CviAII CATG 5 cut(s) 513, 560, 664, 725, 856
CviQI GTAC 1 cut(s) 719
DdeI CTNAG 2 cut(s) 39, 753
DpnI GATC 8 cut(s) 9, 392, 450, 564, 779, 849, 1095, 1105
DpnII GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
DrdI GACNNNNNNGTC 1 cut(s) 443
DseDI GACNNNNNNGTC 1 cut(s) 443
EaeI YGGCCR 1 cut(s) 1044
Eam1104I CTCTTC 1 cut(s) 771
EarI CTCTTC 1 cut(s) 771
Ecl136II GAGCTC 2 cut(s) 325, 938
Eco130I CCWWGG 1 cut(s) 1018
Eco147I AGGCCT 1 cut(s) 175
Eco24I GRGCYC 2 cut(s) 327, 940
Eco47I GGWCC 4 cut(s) 213, 246, 542, 713
Eco53kI GAGCTC 2 cut(s) 325, 938
Eco57I CTGAAG 1 cut(s) 407
Eco72I CACGTG 1 cut(s) 579
EcoICRI GAGCTC 2 cut(s) 325, 938
EcoRII CCWGG 2 cut(s) 627, 1195
EcoT14I CCWWGG 1 cut(s) 1018
EcoT38I GRGCYC 2 cut(s) 327, 940
ErhI CCWWGG 1 cut(s) 1018
FaeI CATG 5 cut(s) 516, 563, 667, 728, 859
FatI CATG 5 cut(s) 512, 559, 663, 724, 855
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 3 cut(s) 123, 900, 1260
FokI GGATG 6 cut(s) 17, 76, 532, 714, 1169, 1295
FriOI GRGCYC 2 cut(s) 327, 940
Fsp4HI GCNGC 3 cut(s) 123, 900, 1260
FspBI CTAG 4 cut(s) 132, 344, 416, 680
GlaI GCGC 1 cut(s) 524
GluI GCNGC 3 cut(s) 123, 900, 1260
GsuI CTGGAG 1 cut(s) 924
HaeIII GGCC 2 cut(s) 175, 1046
HapII CCGG 2 cut(s) 74, 716
HhaI GCGC 1 cut(s) 525
Hin1II CATG 5 cut(s) 516, 563, 667, 728, 859
Hin6I GCGC 1 cut(s) 523
HinP1I GCGC 1 cut(s) 523
HincII GTYRAC 1 cut(s) 108
HindII GTYRAC 1 cut(s) 108
HindIII AAGCTT 1 cut(s) 1073
HinfI GANTC 4 cut(s) 347, 405, 763, 964
HpaI GTTAAC 1 cut(s) 108
HpaII CCGG 2 cut(s) 74, 716
HphI GGTGA 5 cut(s) 139, 493, 545, 1099, 1130
Hpy166II GTNNAC 3 cut(s) 108, 501, 1213
Hpy188I TCNGA 5 cut(s) 432, 534, 567, 754, 782
Hpy8I GTNNAC 3 cut(s) 108, 501, 1213
HpyAV CCTTC 3 cut(s) 560, 1064, 1119
HpyCH4III ACNGT 1 cut(s) 291
HpyCH4IV ACGT 5 cut(s) 438, 466, 519, 578, 1237
HpyCH4V TGCA 7 cut(s) 81, 122, 559, 611, 775, 902, 1009
HpyF3I CTNAG 2 cut(s) 39, 753
HpySE526I ACGT 5 cut(s) 438, 466, 519, 578, 1237
Hsp92II CATG 5 cut(s) 516, 563, 667, 728, 859
HspAI GCGC 1 cut(s) 523
Kpn2I TCCGGA 1 cut(s) 73
KpnI GGTACC 1 cut(s) 722
Ksp22I TGATCA 1 cut(s) 7
KspAI GTTAAC 1 cut(s) 108
Kzo9I GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
LmnI GCTCC 3 cut(s) 229, 322, 943
Lsp1109I GCAGC 3 cut(s) 134, 886, 1271
LweI GCATC 4 cut(s) 109, 598, 996, 1285
MaeI CTAG 4 cut(s) 132, 344, 416, 680
MaeII ACGT 5 cut(s) 438, 466, 519, 578, 1237
MaeIII GTNAC 4 cut(s) 127, 259, 515, 581
MalI GATC 8 cut(s) 9, 392, 450, 564, 779, 849, 1095, 1105
MboI GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
MboII GAAGA 8 cut(s) 178, 266, 400, 606, 758, 926, 1178, 1297
MflI RGATCY 2 cut(s) 390, 847
MhlI GDGCHC 3 cut(s) 327, 576, 940
MlsI TGGCCA 1 cut(s) 1046
MluCI AATT 6 cut(s) 188, 278, 379, 455, 787, 1062
MluNI TGGCCA 1 cut(s) 1046
MlyI GAGTC 2 cut(s) 341, 757
MmeI TCCRAC 2 cut(s) 825, 839
Mox20I TGGCCA 1 cut(s) 1046
MroI TCCGGA 1 cut(s) 73
MscI TGGCCA 1 cut(s) 1046
MseI TTAA 4 cut(s) 107, 371, 696, 1059
MslI CAYNNNNRTG 1 cut(s) 558
Msp20I TGGCCA 1 cut(s) 1046
MspA1I CMGCKG 2 cut(s) 38, 125
MspI CCGG 2 cut(s) 74, 716
MspR9I CCNGG 2 cut(s) 629, 1197
Mva1269I GAATGC 2 cut(s) 81, 362
MvaI CCWGG 2 cut(s) 629, 1197
NdeII GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
NheI GCTAGC 1 cut(s) 679
NlaIII CATG 5 cut(s) 516, 563, 667, 728, 859
NlaIV GGNNCC 4 cut(s) 158, 214, 720, 1016
NmuCI GTSAC 2 cut(s) 127, 515
NspI RCATGY 1 cut(s) 516
NspV TTCGAA 1 cut(s) 792
PagI TCATGA 1 cut(s) 663
PaqCI CACCTGC 1 cut(s) 564
PceI AGGCCT 1 cut(s) 175
PciI ACATGT 1 cut(s) 512
PcsI WCGNNNNNNNCGW 1 cut(s) 444
PctI GAATGC 2 cut(s) 81, 362
PfeI GAWTC 2 cut(s) 405, 964
PkrI GCNGC 3 cut(s) 124, 901, 1261
PleI GAGTC 2 cut(s) 341, 757
PmaCI CACGTG 1 cut(s) 579
PmlI CACGTG 1 cut(s) 579
PpsI GAGTC 2 cut(s) 341, 757
Ppu21I YACGTR 1 cut(s) 579
PscI ACATGT 1 cut(s) 512
PsiI TTATAA 1 cut(s) 923
Psp124BI GAGCTC 2 cut(s) 327, 940
Psp6I CCWGG 2 cut(s) 627, 1195
PspCI CACGTG 1 cut(s) 579
PspGI CCWGG 2 cut(s) 627, 1195
PspN4I GGNNCC 4 cut(s) 158, 214, 720, 1016
PspPI GGNCC 4 cut(s) 213, 246, 542, 713
PstI CTGCAG 1 cut(s) 777
PsuI RGATCY 2 cut(s) 390, 847
PvuII CAGCTG 1 cut(s) 38
RsaI GTAC 1 cut(s) 720
RsaNI GTAC 1 cut(s) 719
RseI CAYNNNNRTG 1 cut(s) 558
SacI GAGCTC 2 cut(s) 327, 940
SaqAI TTAA 4 cut(s) 107, 371, 696, 1059
SatI GCNGC 3 cut(s) 123, 900, 1260
Sau3AI GATC 8 cut(s) 7, 390, 448, 562, 777, 847, 1093, 1103
Sau96I GGNCC 4 cut(s) 213, 246, 542, 713
SchI GAGTC 2 cut(s) 341, 757
ScrFI CCNGG 2 cut(s) 629, 1197
SduI GDGCHC 3 cut(s) 327, 576, 940
SfaNI GCATC 4 cut(s) 109, 598, 996, 1285
SfcI CTRYAG 3 cut(s) 33, 708, 773
SfuI TTCGAA 1 cut(s) 792
SinI GGWCC 4 cut(s) 213, 246, 542, 713
SmiMI CAYNNNNRTG 1 cut(s) 558
SmlI CTYRAG 4 cut(s) 253, 893, 1076, 1299
SmoI CTYRAG 4 cut(s) 253, 893, 1076, 1299
Sse9I AATT 6 cut(s) 188, 278, 379, 455, 787, 1062
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 1 cut(s) 125
SspI AATATT 2 cut(s) 205, 889
SspMI CTAG 4 cut(s) 132, 344, 416, 680
SstI GAGCTC 2 cut(s) 327, 940
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 2 cut(s) 627, 1195
StyI CCWWGG 1 cut(s) 1018
TaaI ACNGT 1 cut(s) 291
TaiI ACGT 5 cut(s) 441, 469, 522, 581, 1240
TaqI TCGA 5 cut(s) 282, 375, 447, 492, 792
TaqII GACCGA 1 cut(s) 234
TasI AATT 6 cut(s) 188, 278, 379, 455, 787, 1062
TfiI GAWTC 2 cut(s) 405, 964
Tru1I TTAA 4 cut(s) 107, 371, 696, 1059
Tru9I TTAA 4 cut(s) 107, 371, 696, 1059
TscAI CASTG 2 cut(s) 155, 296
TseFI GTSAC 2 cut(s) 127, 515
TseI GCWGC 3 cut(s) 122, 899, 1259
Tsp45I GTSAC 2 cut(s) 127, 515
TspDTI ATGAA 9 cut(s) 90, 327, 397, 652, 758, 1179, 1218, 1242, 1297
TspGWI ACGGA 3 cut(s) 205, 665, 966
TspRI CASTG 2 cut(s) 155, 296
VpaK11BI GGWCC 4 cut(s) 213, 246, 542, 713
XapI RAATTY 2 cut(s) 379, 455
XceI RCATGY 1 cut(s) 516
XspI CTAG 4 cut(s) 132, 344, 416, 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.