RchiOBHm_Chr2g0168251

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000084
Physical Location & Seq
Reverse (-)
82686593 .. 82689913
3321 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53593

Sequence Viewer

Length: 1656 bp
ATGGACCGCAATGAAATAATAGCTGTGGTTGAGGAAGACAGTAAGGATCGGGTTAATAAAATTCCGGATTGCATTCTGTCATACATACTTTCTAGTTTAAGAATAAAAGATGCAGTGGATACCTGCTTGATATCCCGGGGATGGAGGGACCTTTGGAAGGGTCCAAGGCCCAATCTGGAATTTGACATTCCAAACATTTTTGGAAGCAAGTATGCCAGGCTCATTGAGAAACATGAAGAAAAGGATAGACTTCCTTTTTTGGTTGATAGATTCGACAGACAATGCTTTGTAAGACGTGTGAATAAACTTTTGGAGCTCTACTCTGGAAACAAGGTAGAGTCTCTCAGAGTGGCATTCTTTTTTGATGTAGAATCTACGGCCATACTTGATAAGTGGATTCGTTTTGCAATTGCGAAGGGAGCTAAAGTTCTCGACCTTCACTTATTGAATAGCACACATTGGGACTATGCAGAATTTTACGTTTTTCCCCACTGGATCTTTTCAGAGTTGAATAATGCAGCAGCCCTAAAGCATTTGTCACTGCACAGATGTGTTCTAAAACCGCCTACTGATTTTAACAGATTGGCTCAGCTAACAGCTCTTTGTCTAAACAAGGTCTTCGTTGATCCAGGATTTTTGGAACATCTGTTCTCGATTTGTGTGCTCCTTGAAGGCTTGACGTTGATAAAATGCAGGGTGCGACTCTCAAATCTGATTATTGGTCCATCGTGTCATCTCAGGGATCTGAAGGTGCTCGAGTGCGATGAATTACTGAAAATAGAAATTGACGCAGTAAATCTTTCCTTCTTTGAATATGATGGAATTATTTTTGACATTTCTTGCATGAAAACTCCACAGCTTGTAAGATTCTTTTTTAGGGGATTTAGTGGTATCCATGGATTACCTTATGCGTTCACCCTACTCGCCTTGTGTCCTTCCCTTGAGACTCTTCATCTGCAGTCGTTTACTGAACTGGAAAATATACCAGAAACACTTCCAACATTTTCAAAGCTCAAGCATGTGAGCTTGGATCTCTTTAATTCAGATTTTGACCTTGGGAGTGTAGTGAGTTTTCTCAAGGCTGCACCTCTTTTGGAAGAACTCGTACTAACGACACGAGCTTATAGCTATCAAGGAGAGATCGGGAATCTTTCCGGATTCTCACATAATCATTTAAGAAAAGTGAAAATGCAGGGGTTCCAAGGCAAGCGGCTAGAGATAGAGTTGGCCATTTGCATTCTTAAATTTGCAACAAAGCTTGAGGTAATGGTGATAGATACACTAGGAAAACACTACCACGGCTGTGGAAGGTGGACCAATTACGATTGTTCTTATTATCAGGAGGGGAATGAGGACGAGAATGAGGATGTGGACTCTGAGGAAGGGAGAGAGGATGAGAACAAGAACGAAGAAGGGACACAGCATGAAAACGAGGAGGACAATGAGGTTGAGGAAGGGAGTGAGCATGAGAACAAGAACGAGGATGAGAATGAGGATGACGATGAAGGGGTGGAGGCTCGGGAATTAAGCAAGGATGAAGACGAGGACAAAGATGAAGACAAGCCTTGGATTTTCCATTGGGAAAGAAGAGGTAGGGCAGTTGTCCAACAAAAGCTGAAAGAAGTAAAGACTGATGCTCAAGTCATCATCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

551

Amino Acids

63.74

Weight (kDa)

5.0

Isoelectric Point (pI)

42.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 107 - 447 2.9e-52 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 129 - 255 2.1e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 131
AccIII TCCGGA 2 cut(s) 64, 1154
AciI CCGC 3 cut(s) 7, 563, 1210
AclWI GGATC 5 cut(s) 54, 503, 620, 750, 1038
AcoI YGGCCR 2 cut(s) 378, 1227
AcsI RAATTY 4 cut(s) 60, 179, 473, 1244
AcuI CTGAAG 1 cut(s) 767
AfaI GTAC 1 cut(s) 1107
AfiI CCNNNNNNNGG 2 cut(s) 141, 157
AflIII ACRYGT 1 cut(s) 295
AgsI TTSAA 5 cut(s) 448, 511, 671, 812, 1008
AjiI CACGTC 1 cut(s) 296
AjnI CCWGG 2 cut(s) 215, 628
AjuI GAANNNNNNNTTGG 2 cut(s) 293, 325
AleI CACNNNNGTG 2 cut(s) 549, 1302
AloI GAACNNNNNNTCC 4 cut(s) 411, 443, 632, 664
Alw21I GWGCWC 3 cut(s) 318, 666, 756
Alw26I GTCTC 2 cut(s) 345, 938
AlwI GGATC 5 cut(s) 54, 503, 620, 750, 1038
Ama87I CYCGRG 3 cut(s) 135, 755, 1518
Aor13HI TCCGGA 2 cut(s) 64, 1154
AoxI GGCC 3 cut(s) 167, 378, 1227
ApeKI GCWGC 3 cut(s) 518, 521, 1082
ApoI RAATTY 4 cut(s) 60, 179, 473, 1244
Asp700I GAANNNNTTC 1 cut(s) 993
AspS9I GGNCC 6 cut(s) 4, 148, 161, 168, 722, 1314
AsuC2I CCSGG 2 cut(s) 136, 137
AsuHPI GGTGA 2 cut(s) 907, 1282
AvaI CYCGRG 3 cut(s) 135, 755, 1518
AvaII GGWCC 5 cut(s) 4, 148, 161, 722, 1314
BalI TGGCCA 1 cut(s) 1229
BanII GRGCYC 1 cut(s) 318
BarI GAAGNNNNNNTAC 2 cut(s) 1089, 1121
BauI CACGAG 1 cut(s) 1116
BbsI GAAGAC 4 cut(s) 42, 610, 1545, 1563
Bbv12I GWGCWC 3 cut(s) 318, 666, 756
BbvI GCAGC 3 cut(s) 530, 533, 1069
BccI CCATC 3 cut(s) 135, 733, 812
BceAI ACGGC 2 cut(s) 393, 1315
BcgI CGANNNNNNTGC 2 cut(s) 643, 677
BciT130I CCWGG 2 cut(s) 217, 630
BciVI GTATCC 2 cut(s) 112, 902
BcnI CCSGG 2 cut(s) 136, 137
BcoDI GTCTC 2 cut(s) 345, 938
BfaI CTAG 3 cut(s) 93, 1214, 1283
BfmI CTRYAG 1 cut(s) 956
BfuAI ACCTGC 1 cut(s) 131
BfuI GTATCC 2 cut(s) 112, 902
BisI GCNGC 4 cut(s) 519, 522, 1083, 1211
BlpI GCTNAGC 1 cut(s) 588
BlsI GCNGC 4 cut(s) 520, 523, 1084, 1212
Bme1390I CCNGG 4 cut(s) 136, 137, 217, 630
Bme18I GGWCC 5 cut(s) 4, 148, 161, 722, 1314
BmeT110I CYCGRG 3 cut(s) 135, 755, 1518
BmgBI CACGTC 1 cut(s) 296
BmgT120I GGNCC 6 cut(s) 4, 148, 161, 168, 722, 1314
BmiI GGNNCC 3 cut(s) 149, 162, 1199
BmrFI CCNGG 4 cut(s) 136, 137, 217, 630
BmsI GCATC 2 cut(s) 100, 1624
BpiI GAAGAC 4 cut(s) 42, 610, 1545, 1563
BplI GAGNNNNNCTC 2 cut(s) 305, 337
Bpu1102I GCTNAGC 1 cut(s) 588
BpuEI CTTGAG 5 cut(s) 962, 998, 1061, 1280, 1623
BpuMI CCSGG 2 cut(s) 136, 137
BsaJI CCNNGG 8 cut(s) 135, 136, 164, 895, 1054, 1201, 1297, 1565
BsaWI WCCGGW 2 cut(s) 64, 1154
BsaXI ACNNNNNCTCC 2 cut(s) 411, 441
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 157
Bse1I ACTGG 2 cut(s) 497, 978
Bse3DI GCAATG 1 cut(s) 16
BseAI TCCGGA 2 cut(s) 64, 1154
BseBI CCWGG 2 cut(s) 217, 630
BseDI CCNNGG 8 cut(s) 135, 136, 164, 895, 1054, 1201, 1297, 1565
BseGI GGATG 7 cut(s) 146, 1372, 1399, 1489, 1501, 1540, 1647
BseLI CCNNNNNNNGG 2 cut(s) 141, 157
BseMI GCAATG 1 cut(s) 16
BseMII CTCAG 4 cut(s) 358, 602, 751, 1368
BseNI ACTGG 2 cut(s) 497, 978
BseRI GAGGAG 1 cut(s) 1448
BseXI GCAGC 3 cut(s) 530, 533, 1069
BsgI GTGCAG 2 cut(s) 527, 1068
BshFI GGCC 3 cut(s) 169, 380, 1229
BsiHKAI GWGCWC 3 cut(s) 318, 666, 756
BsiHKCI CYCGRG 3 cut(s) 135, 755, 1518
BsiSI CCGG 3 cut(s) 65, 136, 1155
BslFI GGGAC 3 cut(s) 161, 476, 1429
BslI CCNNNNNNNGG 2 cut(s) 141, 157
BsmAI GTCTC 2 cut(s) 345, 938
BsmFI GGGAC 3 cut(s) 161, 476, 1429
BsmI GAATGC 3 cut(s) 72, 353, 1236
BsnI GGCC 3 cut(s) 169, 380, 1229
BsoBI CYCGRG 3 cut(s) 135, 755, 1518
Bsp1286I GDGCHC 3 cut(s) 318, 666, 756
Bsp13I TCCGGA 2 cut(s) 64, 1154
Bsp143I GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
Bsp1720I GCTNAGC 1 cut(s) 588
Bsp19I CCATGG 1 cut(s) 895
BspACI CCGC 3 cut(s) 7, 563, 1210
BspANI GGCC 3 cut(s) 169, 380, 1229
BspCNI CTCAG 4 cut(s) 357, 601, 750, 1369
BspEI TCCGGA 2 cut(s) 64, 1154
BspLI GGNNCC 3 cut(s) 149, 162, 1199
BspMAI CTGCAG 1 cut(s) 960
BspMI ACCTGC 1 cut(s) 131
BspPI GGATC 5 cut(s) 54, 503, 620, 750, 1038
BsrDI GCAATG 1 cut(s) 16
BsrI ACTGG 2 cut(s) 497, 978
BssECI CCNNGG 8 cut(s) 135, 136, 164, 895, 1054, 1201, 1297, 1565
BssMI GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
BssSI CACGAG 1 cut(s) 1116
BssT1I CCWWGG 5 cut(s) 164, 895, 1054, 1201, 1565
Bst2BI CACGAG 1 cut(s) 1116
Bst2UI CCWGG 2 cut(s) 217, 630
Bst4CI ACNGT 1 cut(s) 41
Bst6I CTCTTC 2 cut(s) 954, 1582
BstC8I GCNNGC 1 cut(s) 1208
BstDEI CTNAG 4 cut(s) 344, 588, 737, 1377
BstDSI CCRYGG 2 cut(s) 895, 1297
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 7 cut(s) 146, 1372, 1399, 1489, 1501, 1540, 1647
BstKTI GATC 6 cut(s) 49, 498, 628, 745, 1033, 1143
BstMAI GTCTC 2 cut(s) 345, 938
BstMBI GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
BstMWI GCNNNNNNNGC 1 cut(s) 419
BstNI CCWGG 2 cut(s) 217, 630
BstNSI RCATGY 1 cut(s) 1022
BstSCI CCNGG 4 cut(s) 134, 135, 215, 628
BstSFI CTRYAG 1 cut(s) 956
BstV1I GCAGC 3 cut(s) 530, 533, 1069
BstV2I GAAGAC 4 cut(s) 42, 610, 1545, 1563
BstX2I RGATCY 3 cut(s) 495, 742, 1030
BstXI CCANNNNNNTGG 1 cut(s) 1304
BstYI RGATCY 3 cut(s) 495, 742, 1030
BsuI GTATCC 2 cut(s) 112, 902
BsuRI GGCC 3 cut(s) 169, 380, 1229
BtgI CCRYGG 2 cut(s) 895, 1297
BtgZI GCGATG 1 cut(s) 777
BtrI CACGTC 1 cut(s) 296
BtsCI GGATG 7 cut(s) 146, 1372, 1399, 1489, 1501, 1540, 1647
BtsI GCAGTG 2 cut(s) 120, 539
BtsIMutI CAGTG 3 cut(s) 120, 490, 539
BveI ACCTGC 1 cut(s) 131
Cac8I GCNNGC 1 cut(s) 1208
Cfr13I GGNCC 6 cut(s) 4, 148, 161, 168, 722, 1314
Cfr9I CCCGGG 1 cut(s) 135
CseI GACGC 1 cut(s) 797
Csp6I GTAC 1 cut(s) 1106
CviAII CATG 6 cut(s) 233, 844, 896, 1019, 1424, 1466
CviQI GTAC 1 cut(s) 1106
DdeI CTNAG 4 cut(s) 344, 588, 737, 1377
DpnI GATC 6 cut(s) 48, 497, 627, 744, 1032, 1142
DpnII GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
EaeI YGGCCR 2 cut(s) 378, 1227
Eam1104I CTCTTC 2 cut(s) 954, 1582
EarI CTCTTC 2 cut(s) 954, 1582
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 5 cut(s) 164, 895, 1054, 1201, 1565
Eco24I GRGCYC 1 cut(s) 318
Eco32I GATATC 1 cut(s) 132
Eco47I GGWCC 5 cut(s) 4, 148, 161, 722, 1314
Eco53kI GAGCTC 1 cut(s) 316
Eco57I CTGAAG 1 cut(s) 767
Eco88I CYCGRG 3 cut(s) 135, 755, 1518
EcoICRI GAGCTC 1 cut(s) 316
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoO109I RGGNCCY 1 cut(s) 148
EcoRII CCWGG 2 cut(s) 215, 628
EcoRV GATATC 1 cut(s) 132
EcoT14I CCWWGG 5 cut(s) 164, 895, 1054, 1201, 1565
EcoT38I GRGCYC 1 cut(s) 318
ErhI CCWWGG 5 cut(s) 164, 895, 1054, 1201, 1565
FaeI CATG 6 cut(s) 236, 847, 899, 1022, 1427, 1469
FaqI GGGAC 3 cut(s) 161, 476, 1429
FatI CATG 6 cut(s) 232, 843, 895, 1018, 1423, 1465
Fnu4HI GCNGC 4 cut(s) 519, 522, 1083, 1211
FokI GGATG 7 cut(s) 153, 1379, 1406, 1496, 1508, 1547, 1634
FriOI GRGCYC 1 cut(s) 318
Fsp4HI GCNGC 4 cut(s) 519, 522, 1083, 1211
FspBI CTAG 3 cut(s) 93, 1214, 1283
GluI GCNGC 4 cut(s) 519, 522, 1083, 1211
HaeIII GGCC 3 cut(s) 169, 380, 1229
HapII CCGG 3 cut(s) 65, 136, 1155
HgaI GACGC 1 cut(s) 797
Hin1II CATG 6 cut(s) 236, 847, 899, 1022, 1427, 1469
HindIII AAGCTT 1 cut(s) 1256
HpaII CCGG 3 cut(s) 65, 136, 1155
HphI GGTGA 2 cut(s) 907, 1282
Hpy166II GTNNAC 4 cut(s) 915, 966, 1314, 1372
Hpy188I TCNGA 6 cut(s) 347, 505, 714, 747, 1045, 1378
Hpy188III TCNNGA 9 cut(s) 65, 176, 324, 431, 652, 1144, 1155, 1340, 1520
Hpy8I GTNNAC 4 cut(s) 915, 966, 1314, 1372
HpyCH4III ACNGT 1 cut(s) 41
HpyCH4IV ACGT 3 cut(s) 295, 480, 680
HpyF10VI GCNNNNNNNGC 1 cut(s) 419
HpyF3I CTNAG 4 cut(s) 344, 588, 737, 1377
HpySE526I ACGT 3 cut(s) 295, 480, 680
Hsp92II CATG 6 cut(s) 236, 847, 899, 1022, 1427, 1469
Kpn2I TCCGGA 2 cut(s) 64, 1154
Kzo9I GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
LmnI GCTCC 3 cut(s) 313, 419, 669
Lsp1109I GCAGC 3 cut(s) 530, 533, 1069
LweI GCATC 2 cut(s) 100, 1624
MaeI CTAG 3 cut(s) 93, 1214, 1283
MaeII ACGT 3 cut(s) 295, 480, 680
MaeIII GTNAC 1 cut(s) 537
MalI GATC 6 cut(s) 48, 497, 627, 744, 1032, 1142
MboI GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
MboII GAAGA 9 cut(s) 47, 248, 610, 941, 1109, 1421, 1550, 1568, 1599
MfeI CAATTG 1 cut(s) 408
MflI RGATCY 3 cut(s) 495, 742, 1030
MhlI GDGCHC 3 cut(s) 318, 666, 756
MlsI TGGCCA 1 cut(s) 1229
MluNI TGGCCA 1 cut(s) 1229
MlyI GAGTC 4 cut(s) 347, 696, 940, 1367
MmeI TCCRAC 2 cut(s) 1022, 1630
Mox20I TGGCCA 1 cut(s) 1229
MroI TCCGGA 2 cut(s) 64, 1154
MroXI GAANNNNTTC 1 cut(s) 993
MscI TGGCCA 1 cut(s) 1229
MseI TTAA 7 cut(s) 54, 98, 576, 1038, 1175, 1242, 1526
MslI CAYNNNNRTG 2 cut(s) 549, 1302
Msp20I TGGCCA 1 cut(s) 1229
MspI CCGG 3 cut(s) 65, 136, 1155
MspR9I CCNGG 4 cut(s) 136, 137, 217, 630
MunI CAATTG 1 cut(s) 408
Mva1269I GAATGC 3 cut(s) 72, 353, 1236
MvaI CCWGG 2 cut(s) 217, 630
MwoI GCNNNNNNNGC 1 cut(s) 419
NciI CCSGG 2 cut(s) 136, 137
NcoI CCATGG 1 cut(s) 895
NdeII GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
NlaIII CATG 6 cut(s) 236, 847, 899, 1022, 1427, 1469
NlaIV GGNNCC 3 cut(s) 149, 162, 1199
NmuCI GTSAC 1 cut(s) 537
NspI RCATGY 1 cut(s) 1022
OliI CACNNNNGTG 2 cut(s) 549, 1302
PaeR7I CTCGAG 1 cut(s) 755
PctI GAATGC 3 cut(s) 72, 353, 1236
PdmI GAANNNNTTC 1 cut(s) 993
PfeI GAWTC 6 cut(s) 270, 371, 397, 867, 1147, 1158
PfoI TCCNGGA 1 cut(s) 628
PkrI GCNGC 4 cut(s) 520, 523, 1084, 1212
PleI GAGTC 4 cut(s) 346, 696, 940, 1367
PpsI GAGTC 4 cut(s) 346, 696, 940, 1367
PpuMI RGGWCCY 1 cut(s) 148
Psp124BI GAGCTC 1 cut(s) 318
Psp5II RGGWCCY 1 cut(s) 148
Psp6I CCWGG 2 cut(s) 215, 628
PspGI CCWGG 2 cut(s) 215, 628
PspN4I GGNNCC 3 cut(s) 149, 162, 1199
PspPI GGNCC 6 cut(s) 4, 148, 161, 168, 722, 1314
PspPPI RGGWCCY 1 cut(s) 148
PspXI VCTCGAGB 1 cut(s) 755
PstI CTGCAG 1 cut(s) 960
PsuI RGATCY 3 cut(s) 495, 742, 1030
RsaI GTAC 1 cut(s) 1107
RsaNI GTAC 1 cut(s) 1106
RseI CAYNNNNRTG 2 cut(s) 549, 1302
SacI GAGCTC 1 cut(s) 318
SaqAI TTAA 7 cut(s) 54, 98, 576, 1038, 1175, 1242, 1526
SatI GCNGC 4 cut(s) 519, 522, 1083, 1211
Sau3AI GATC 6 cut(s) 46, 495, 625, 742, 1030, 1140
Sau96I GGNCC 6 cut(s) 4, 148, 161, 168, 722, 1314
SchI GAGTC 4 cut(s) 347, 696, 940, 1367
ScrFI CCNGG 4 cut(s) 136, 137, 217, 630
SduI GDGCHC 3 cut(s) 318, 666, 756
SfaNI GCATC 2 cut(s) 100, 1624
SfcI CTRYAG 1 cut(s) 956
Sfr274I CTCGAG 1 cut(s) 755
SinI GGWCC 5 cut(s) 4, 148, 161, 722, 1314
SlaI CTCGAG 1 cut(s) 755
SmaI CCCGGG 1 cut(s) 137
SmiMI CAYNNNNRTG 2 cut(s) 549, 1302
SmlI CTYRAG 6 cut(s) 755, 941, 1013, 1076, 1259, 1638
SmoI CTYRAG 6 cut(s) 755, 941, 1013, 1076, 1259, 1638
SsiI CCGC 3 cut(s) 7, 563, 1210
SspMI CTAG 3 cut(s) 93, 1214, 1283
SstI GAGCTC 1 cut(s) 318
StyD4I CCNGG 4 cut(s) 134, 135, 215, 628
StyI CCWWGG 5 cut(s) 164, 895, 1054, 1201, 1565
TaaI ACNGT 1 cut(s) 41
TaiI ACGT 3 cut(s) 298, 483, 683
TaqI TCGA 4 cut(s) 273, 432, 653, 756
TauI GCSGC 1 cut(s) 1213
TfiI GAWTC 6 cut(s) 270, 371, 397, 867, 1147, 1158
Tru1I TTAA 7 cut(s) 54, 98, 576, 1038, 1175, 1242, 1526
Tru9I TTAA 7 cut(s) 54, 98, 576, 1038, 1175, 1242, 1526
TscAI CASTG 3 cut(s) 120, 497, 546
TseFI GTSAC 1 cut(s) 537
TseI GCWGC 3 cut(s) 518, 521, 1082
Tsp45I GTSAC 1 cut(s) 537
TspDTI ATGAA 9 cut(s) 27, 249, 780, 860, 941, 1440, 1518, 1551, 1569
TspMI CCCGGG 1 cut(s) 135
TspRI CASTG 3 cut(s) 120, 497, 546
VpaK11BI GGWCC 5 cut(s) 4, 148, 161, 722, 1314
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 4 cut(s) 60, 179, 473, 1244
XceI RCATGY 1 cut(s) 1022
XhoI CTCGAG 1 cut(s) 755
XmaI CCCGGG 1 cut(s) 135
XmnI GAANNNNTTC 1 cut(s) 993
XspI CTAG 3 cut(s) 93, 1214, 1283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.