RLG00000021745

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000084
Physical Location & Seq
Forward (+)
77890579 .. 77893422
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021745

Sequence Viewer

Length: 1638 bp
ATGATACCAATCAAGTTTGATCCGCATAGAAAAATTGGGAGAAGAAAATATTTCGGAATCATATCACCATTAATCATCTTGAAGACTGGCCAAGGGTTTGCTGATGACTTTGATTTTATGTTTGATTGCAAGGTAGACAGAATTCAACTTTCTTATTGCTGTTCAGCTATGGACAGCTGTGGAATAATAGCTAAGGTTGAGGGCAAGAATAAGGCTTCAATTGATAAGTTACCGTCTTGTATTTTGTCACACATACTTTCATTTTTACCAATAAAAGATGCTGTGGATACTTGCATGTTATCCCAGCAGTGGAGACACCTTTGGAAGCATCCAATACTGACAACGCCCAATCTTGAGTTTGACATTCTAAACATTTTTGGACACAATTATGCTCAGCTCGTTAAAGAATGTGGAGCATACAAATTTAATATGCGTCAACTCGAGAGACAAAGCTCTGTGTTTGTGAGACGTGTGAATGAGATATTGCTGTTCTACAATCGTAAGAAGGTATACTCTTTCAAAGTGGCATGCCCTTTCGATGCAGACTCTACGGTCATCCTTGATGAATGGGTTCGTTTTGCTATTACAAAGGGAGCTGAAGTACTCGATGTTCAGTTATCAAGCCGCAGTGGCGTTTTGGATACAGAAAATGTTTATGTTTTTCCCCATTGGAGATGCATTTTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAACAACTCTCTGTCTAAATAAGGTTATTGTCGATCCAGTTTTCTTGGCACATCTGTTCTCTGTTTGTTCGCTCCTCAAAAGCTTGACCTTGAGCTATTGCAGAGGGGGCTCATATCTGATTGTTGGTCCATCACTTCGTCTGAATGATCTTAAAGTTCTTACCTGTTTTGGTTTAAAAAGAGTAGAGATAGATGCAGTAAACCTTTCTTCTTTAGAATGTCGTGGATTACATTCGGTAATTTCTTGCATGAGAACTCCACAGCTACTAGTGAGATGTTATTTTGAGGGATATTCTGAAGGAGCAATGTCTTATGCGCTCACCCAACTTGCCTTGTGTCCTGGGCTTGAGACTCTTCATCTGCAGAGCTACAATCATAATGAAGATATACCTCAAACTGTTTTGACATTGAGAAACCTGAAACAAGTGAACTTGGATCTCTTCATGGGAAACTTTAACCTTGGGAGTGTTCTGAATATTGTCAAGGCTGCACCTCTTTTGGAAGAGTTTATAATAACGGTACGAGTAACAAGCTATCAAGGAGATGTAAGGAATCTTTCTGGATTTTCACATGACCATTTGAGAAGATTTAAGATGCAGGGGTTCCAGGGTAAGTGGATCGAGATAGAGTTGGCAATTTGCATTCTTAAAATTGCAACAAACCTCGAGGTATTGGTGATTGATCCATATGGAAAATATTACAACGGTGGTGGAAGCTGGATCGAAATCAACTGTTGTTATTACAGGGAGGGGTATGAGAATGAGGGCAAGGATGACAATGAAGAGAAAATTTTCCTGCACATAGAGGACGGAGTGGATGTGGTGGATTTGCAGTATTTTTGGTGGAAACAAAGAGGTAGTGTAGTTGTCCCAAAAAGGCTGAAGGAAGTAATGACGGATGCTCAAGTTATAATCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

546

Amino Acids

62.4

Weight (kDa)

7.76

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 74 - 113 9.7e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 178 - 472 3.4e-35 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1229, 1628
AasI GACNNNNNNGTC 1 cut(s) 551
AbsI CCTCGAGG 1 cut(s) 1382
AccI GTMKAC 2 cut(s) 135, 510
AciI CCGC 2 cut(s) 23, 625
AclWI GGATC 6 cut(s) 14, 746, 1161, 1343, 1394, 1445
AcoI YGGCCR 1 cut(s) 88
AcsI RAATTY 3 cut(s) 141, 422, 1506
AcuI CTGAAG 3 cut(s) 618, 1035, 1619
AfaI GTAC 2 cut(s) 603, 1239
AfiI CCNNNNNNNGG 1 cut(s) 309
AflIII ACRYGT 1 cut(s) 469
AgsI TTSAA 4 cut(s) 82, 146, 219, 520
AhlI ACTAGT 1 cut(s) 985
AjiI CACGTC 1 cut(s) 470
AjnI CCWGG 2 cut(s) 1057, 1323
Alw26I GTCTC 4 cut(s) 307, 439, 460, 1061
AlwI GGATC 6 cut(s) 14, 746, 1161, 1343, 1394, 1445
Ama87I CYCGRG 2 cut(s) 440, 1382
AoxI GGCC 1 cut(s) 88
ApeKI GCWGC 1 cut(s) 1205
ApoI RAATTY 3 cut(s) 141, 422, 1506
AseI ATTAAT 1 cut(s) 71
Asp700I GAANNNNTTC 2 cut(s) 570, 1508
AspLEI GCGC 1 cut(s) 1036
AspS9I GGNCC 1 cut(s) 845
AsuHPI GGTGA 3 cut(s) 57, 1030, 1405
AvaI CYCGRG 2 cut(s) 440, 1382
AvaII GGWCC 1 cut(s) 845
BalI TGGCCA 1 cut(s) 90
BanII GRGCYC 1 cut(s) 830
BbsI GAAGAC 1 cut(s) 89
BbvI GCAGC 1 cut(s) 1192
BccI CCATC 1 cut(s) 856
BciT130I CCWGG 2 cut(s) 1059, 1325
BciVI GTATCC 2 cut(s) 280, 634
BcoDI GTCTC 4 cut(s) 307, 439, 460, 1061
BcuI ACTAGT 1 cut(s) 985
BfaI CTAG 1 cut(s) 986
BfmI CTRYAG 1 cut(s) 1079
BfuI GTATCC 2 cut(s) 280, 634
BglI GCCNNNNNGGC 1 cut(s) 630
BisI GCNGC 2 cut(s) 625, 1206
BlpI GCTNAGC 1 cut(s) 393
BlsI GCNGC 2 cut(s) 626, 1207
BmcAI AGTACT 1 cut(s) 603
Bme1390I CCNGG 2 cut(s) 1059, 1325
Bme18I GGWCC 1 cut(s) 845
BmeT110I CYCGRG 2 cut(s) 440, 1382
BmgBI CACGTC 1 cut(s) 470
BmgT120I GGNCC 1 cut(s) 845
BmiI GGNNCC 1 cut(s) 1322
BmrFI CCNGG 2 cut(s) 1059, 1325
BmsI GCATC 7 cut(s) 268, 337, 529, 665, 901, 1302, 1606
BpiI GAAGAC 1 cut(s) 89
Bpu10I CCTNAGC 1 cut(s) 192
Bpu1102I GCTNAGC 1 cut(s) 393
BpuEI CTTGAG 4 cut(s) 374, 829, 1085, 1605
BsaBI GATNNNNATC 2 cut(s) 8, 1442
BsaJI CCNNGG 4 cut(s) 91, 1058, 1177, 1324
BsaXI ACNNNNNCTCC 4 cut(s) 585, 615, 1521, 1551
Bsc4I CCNNNNNNNGG 1 cut(s) 309
Bse1I ACTGG 2 cut(s) 91, 755
Bse3DI GCAATG 1 cut(s) 1029
Bse8I GATNNNNATC 2 cut(s) 8, 1442
BseBI CCWGG 2 cut(s) 1059, 1325
BseDI CCNNGG 4 cut(s) 91, 1058, 1177, 1324
BseGI GGATG 5 cut(s) 328, 555, 1495, 1540, 1621
BseJI GATNNNNATC 2 cut(s) 8, 1442
BseLI CCNNNNNNNGG 1 cut(s) 309
BseMI GCAATG 1 cut(s) 1029
BseMII CTCAG 1 cut(s) 407
BseNI ACTGG 2 cut(s) 91, 755
BseRI GAGGAG 1 cut(s) 782
BseXI GCAGC 1 cut(s) 1192
BseYI CCCAGC 1 cut(s) 303
BsgI GTGCAG 2 cut(s) 1191, 1499
BshFI GGCC 1 cut(s) 90
BsiHKCI CYCGRG 2 cut(s) 440, 1382
BslFI GGGAC 1 cut(s) 1571
BslI CCNNNNNNNGG 1 cut(s) 309
BsmAI GTCTC 4 cut(s) 307, 439, 460, 1061
BsmBI CGTCTC 1 cut(s) 460
BsmFI GGGAC 1 cut(s) 1571
BsmI GAATGC 1 cut(s) 1359
BsnI GGCC 1 cut(s) 90
BsoBI CYCGRG 2 cut(s) 440, 1382
Bsp1286I GDGCHC 1 cut(s) 830
Bsp143I GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
Bsp1720I GCTNAGC 1 cut(s) 393
BspACI CCGC 2 cut(s) 23, 625
BspANI GGCC 1 cut(s) 90
BspCNI CTCAG 1 cut(s) 406
BspLI GGNNCC 1 cut(s) 1322
BspMAI CTGCAG 1 cut(s) 1083
BspPI GGATC 6 cut(s) 14, 746, 1161, 1343, 1394, 1445
BsrDI GCAATG 1 cut(s) 1029
BsrI ACTGG 2 cut(s) 91, 755
BssECI CCNNGG 4 cut(s) 91, 1058, 1177, 1324
BssMI GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
BssNAI GTATAC 1 cut(s) 511
BssT1I CCWWGG 2 cut(s) 91, 1177
Bst1107I GTATAC 1 cut(s) 511
Bst2UI CCWGG 2 cut(s) 1059, 1325
Bst4CI ACNGT 6 cut(s) 234, 553, 1117, 1237, 1424, 1451
Bst6I CTCTTC 4 cut(s) 1077, 1163, 1215, 1494
BstC8I GCNNGC 1 cut(s) 529
BstDEI CTNAG 2 cut(s) 192, 393
BstF5I GGATG 5 cut(s) 328, 555, 1495, 1540, 1621
BstHHI GCGC 1 cut(s) 1036
BstKTI GATC 7 cut(s) 22, 754, 868, 1156, 1338, 1402, 1440
BstMAI GTCTC 4 cut(s) 307, 439, 460, 1061
BstMBI GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
BstMWI GCNNNNNNNGC 2 cut(s) 630, 825
BstNI CCWGG 2 cut(s) 1059, 1325
BstNSI RCATGY 2 cut(s) 298, 531
BstSCI CCNGG 2 cut(s) 1057, 1323
BstSFI CTRYAG 1 cut(s) 1079
BstV1I GCAGC 1 cut(s) 1192
BstV2I GAAGAC 1 cut(s) 89
BstX2I RGATCY 1 cut(s) 1153
BstYI RGATCY 1 cut(s) 1153
BstZ17I GTATAC 1 cut(s) 511
BsuI GTATCC 2 cut(s) 280, 634
BsuRI GGCC 1 cut(s) 90
BtrI CACGTC 1 cut(s) 470
BtsCI GGATG 5 cut(s) 328, 555, 1495, 1540, 1621
BtsI GCAGTG 2 cut(s) 314, 634
BtsIMutI CAGTG 2 cut(s) 314, 634
Cac8I GCNNGC 1 cut(s) 529
CfoI GCGC 1 cut(s) 1036
Cfr13I GGNCC 1 cut(s) 845
CseI GACGC 1 cut(s) 422
Csp6I GTAC 2 cut(s) 602, 1238
CspCI CAANNNNNGTGG 2 cut(s) 1408, 1443
CviAII CATG 5 cut(s) 295, 528, 967, 1162, 1289
CviQI GTAC 2 cut(s) 602, 1238
DdeI CTNAG 2 cut(s) 192, 393
DpnI GATC 7 cut(s) 21, 753, 867, 1155, 1337, 1401, 1439
DpnII GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
DraI TTTAAA 2 cut(s) 684, 894
DrdI GACNNNNNNGTC 1 cut(s) 551
DseDI GACNNNNNNGTC 1 cut(s) 551
EaeI YGGCCR 1 cut(s) 88
Eam1104I CTCTTC 4 cut(s) 1077, 1163, 1215, 1494
EarI CTCTTC 4 cut(s) 1077, 1163, 1215, 1494
Eco130I CCWWGG 2 cut(s) 91, 1177
Eco24I GRGCYC 1 cut(s) 830
Eco47I GGWCC 1 cut(s) 845
Eco57I CTGAAG 3 cut(s) 618, 1035, 1619
Eco88I CYCGRG 2 cut(s) 440, 1382
EcoRI GAATTC 1 cut(s) 141
EcoRII CCWGG 2 cut(s) 1057, 1323
EcoT14I CCWWGG 2 cut(s) 91, 1177
EcoT22I ATGCAT 1 cut(s) 680
EcoT38I GRGCYC 1 cut(s) 830
ErhI CCWWGG 2 cut(s) 91, 1177
Esp3I CGTCTC 1 cut(s) 460
FaeI CATG 5 cut(s) 298, 531, 970, 1165, 1292
FaqI GGGAC 1 cut(s) 1571
FatI CATG 5 cut(s) 294, 527, 966, 1161, 1288
FauNDI CATATG 1 cut(s) 1405
FblI GTMKAC 2 cut(s) 135, 510
Fnu4HI GCNGC 2 cut(s) 625, 1206
FokI GGATG 5 cut(s) 315, 542, 1502, 1547, 1628
FriOI GRGCYC 1 cut(s) 830
Fsp4HI GCNGC 2 cut(s) 625, 1206
FspBI CTAG 1 cut(s) 986
GlaI GCGC 1 cut(s) 1035
GluI GCNGC 2 cut(s) 625, 1206
GsaI CCCAGC 1 cut(s) 307
HaeIII GGCC 1 cut(s) 90
HgaI GACGC 1 cut(s) 422
HhaI GCGC 1 cut(s) 1036
Hin1II CATG 5 cut(s) 298, 531, 970, 1165, 1292
Hin6I GCGC 1 cut(s) 1034
HinP1I GCGC 1 cut(s) 1034
HincII GTYRAC 1 cut(s) 437
HindII GTYRAC 1 cut(s) 437
HindIII AAGCTT 1 cut(s) 799
HinfI GANTC 5 cut(s) 57, 545, 708, 1069, 1270
HphI GGTGA 3 cut(s) 57, 1030, 1405
Hpy166II GTNNAC 5 cut(s) 136, 437, 511, 919, 1147
Hpy188I TCNGA 5 cut(s) 56, 837, 861, 1015, 1191
Hpy188III TCNNGA 5 cut(s) 79, 353, 442, 1278, 1339
Hpy8I GTNNAC 5 cut(s) 136, 437, 511, 919, 1147
HpyAV CCTTC 3 cut(s) 499, 1010, 1594
HpyCH4III ACNGT 6 cut(s) 234, 553, 1117, 1237, 1424, 1451
HpyCH4IV ACGT 1 cut(s) 469
HpyF10VI GCNNNNNNNGC 2 cut(s) 630, 825
HpyF3I CTNAG 2 cut(s) 192, 393
HpySE526I ACGT 1 cut(s) 469
Hsp92II CATG 5 cut(s) 298, 531, 970, 1165, 1292
HspAI GCGC 1 cut(s) 1034
Kzo9I GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
LmnI GCTCC 4 cut(s) 413, 593, 795, 1019
Lsp1109I GCAGC 1 cut(s) 1192
LweI GCATC 7 cut(s) 268, 337, 529, 665, 901, 1302, 1606
MaeI CTAG 1 cut(s) 986
MaeII ACGT 1 cut(s) 469
MaeIII GTNAC 3 cut(s) 228, 246, 1243
MalI GATC 7 cut(s) 21, 753, 867, 1155, 1337, 1401, 1439
MboI GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
MboII GAAGA 9 cut(s) 54, 94, 918, 1064, 1112, 1150, 1232, 1314, 1511
MfeI CAATTG 1 cut(s) 219
MflI RGATCY 1 cut(s) 1153
MhlI GDGCHC 1 cut(s) 830
MlsI TGGCCA 1 cut(s) 90
MluCI AATT 9 cut(s) 33, 141, 219, 385, 422, 957, 1353, 1368, 1506
MluNI TGGCCA 1 cut(s) 90
MlyI GAGTC 2 cut(s) 539, 1063
Mox20I TGGCCA 1 cut(s) 90
Mph1103I ATGCAT 1 cut(s) 680
MroXI GAANNNNTTC 2 cut(s) 570, 1508
MscI TGGCCA 1 cut(s) 90
MseI TTAA 9 cut(s) 71, 402, 426, 683, 870, 893, 1173, 1308, 1365
MslI CAYNNNNRTG 1 cut(s) 387
Msp20I TGGCCA 1 cut(s) 90
MspA1I CMGCKG 1 cut(s) 177
MspR9I CCNGG 2 cut(s) 1059, 1325
MunI CAATTG 1 cut(s) 219
Mva1269I GAATGC 1 cut(s) 1359
MvaI CCWGG 2 cut(s) 1059, 1325
MwoI GCNNNNNNNGC 2 cut(s) 630, 825
NdeI CATATG 1 cut(s) 1405
NdeII GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
NlaIII CATG 5 cut(s) 298, 531, 970, 1165, 1292
NlaIV GGNNCC 1 cut(s) 1322
NmuCI GTSAC 1 cut(s) 246
NsiI ATGCAT 1 cut(s) 680
NspI RCATGY 2 cut(s) 298, 531
PaeI GCATGC 1 cut(s) 531
PaeR7I CTCGAG 2 cut(s) 440, 1382
PctI GAATGC 1 cut(s) 1359
PdmI GAANNNNTTC 2 cut(s) 570, 1508
PfeI GAWTC 3 cut(s) 57, 708, 1270
PkrI GCNGC 2 cut(s) 626, 1207
PleI GAGTC 2 cut(s) 539, 1063
PpsI GAGTC 2 cut(s) 539, 1063
PshBI ATTAAT 1 cut(s) 71
PsiI TTATAA 2 cut(s) 1229, 1628
Psp6I CCWGG 2 cut(s) 1057, 1323
PspFI CCCAGC 1 cut(s) 303
PspGI CCWGG 2 cut(s) 1057, 1323
PspN4I GGNNCC 1 cut(s) 1322
PspPI GGNCC 1 cut(s) 845
PspXI VCTCGAGB 1 cut(s) 1382
PsrI GAACNNNNNNTAC 2 cut(s) 594, 626
PstI CTGCAG 1 cut(s) 1083
PsuI RGATCY 1 cut(s) 1153
PvuII CAGCTG 1 cut(s) 177
RsaI GTAC 2 cut(s) 603, 1239
RsaNI GTAC 2 cut(s) 602, 1238
RseI CAYNNNNRTG 1 cut(s) 387
SaqAI TTAA 9 cut(s) 71, 402, 426, 683, 870, 893, 1173, 1308, 1365
SatI GCNGC 2 cut(s) 625, 1206
Sau3AI GATC 7 cut(s) 19, 751, 865, 1153, 1335, 1399, 1437
Sau96I GGNCC 1 cut(s) 845
ScaI AGTACT 1 cut(s) 603
SchI GAGTC 2 cut(s) 539, 1063
ScrFI CCNGG 2 cut(s) 1059, 1325
SduI GDGCHC 1 cut(s) 830
SfaNI GCATC 7 cut(s) 268, 337, 529, 665, 901, 1302, 1606
SfcI CTRYAG 1 cut(s) 1079
Sfr274I CTCGAG 2 cut(s) 440, 1382
SinI GGWCC 1 cut(s) 845
SlaI CTCGAG 2 cut(s) 440, 1382
SmiMI CAYNNNNRTG 1 cut(s) 387
SmlI CTYRAG 6 cut(s) 353, 440, 808, 1064, 1382, 1620
SmoI CTYRAG 6 cut(s) 353, 440, 808, 1064, 1382, 1620
SpeI ACTAGT 1 cut(s) 985
SphI GCATGC 1 cut(s) 531
Sse9I AATT 9 cut(s) 33, 141, 219, 385, 422, 957, 1353, 1368, 1506
SsiI CCGC 2 cut(s) 23, 625
SspI AATATT 3 cut(s) 50, 1195, 1415
SspMI CTAG 1 cut(s) 986
StyD4I CCNGG 2 cut(s) 1057, 1323
StyI CCWWGG 2 cut(s) 91, 1177
TaaI ACNGT 6 cut(s) 234, 553, 1117, 1237, 1424, 1451
TaiI ACGT 1 cut(s) 472
TaqI TCGA 7 cut(s) 441, 537, 606, 750, 1338, 1383, 1440
TasI AATT 9 cut(s) 33, 141, 219, 385, 422, 957, 1353, 1368, 1506
TatI WGTACW 1 cut(s) 601
TauI GCSGC 1 cut(s) 627
TfiI GAWTC 3 cut(s) 57, 708, 1270
Tru1I TTAA 9 cut(s) 71, 402, 426, 683, 870, 893, 1173, 1308, 1365
Tru9I TTAA 9 cut(s) 71, 402, 426, 683, 870, 893, 1173, 1308, 1365
TscAI CASTG 2 cut(s) 314, 634
TseFI GTSAC 1 cut(s) 246
TseI GCWGC 1 cut(s) 1205
Tsp45I GTSAC 1 cut(s) 246
TspDTI ATGAA 7 cut(s) 249, 579, 700, 1064, 1113, 1150, 1512
TspGWI ACGGA 2 cut(s) 1542, 1628
TspRI CASTG 2 cut(s) 314, 634
VpaK11BI GGWCC 1 cut(s) 845
VspI ATTAAT 1 cut(s) 71
XapI RAATTY 3 cut(s) 141, 422, 1506
XceI RCATGY 2 cut(s) 298, 531
XhoI CTCGAG 2 cut(s) 440, 1382
XmiI GTMKAC 2 cut(s) 135, 510
XmnI GAANNNNTTC 2 cut(s) 570, 1508
XspI CTAG 1 cut(s) 986
ZrmI AGTACT 1 cut(s) 603
Zsp2I ATGCAT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.