Rh5CG074800

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000084
Physical Location & Seq
Reverse (-)
5602073 .. 5608395
6323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG074800.1

Sequence Viewer

Length: 1248 bp
ATGGTTATTAAGCCATTTGCAGAATACTATTCCAATGATGTTGATGCAAAGATCAGCTACTCCGGCAGCAAGAATTATCTAGCAAGACCTAGGGCAGTTATCCAAGACAAACTCAAGGAACTGTATAAAGGTGACAAGGTCGACTCTTTCACAGTGGAGTTCACTGATCAAGAAGGTGGCGACGTCCTTGACCGATGGATCCGTTTCGCAATTACCAAGGGAGTTGAAGAACTTCATCTTCGACATCACGTTTTTGATTATGTTTTCCCTCACTGGTTACTTTCTGAACAAGTAAACGCAGGCTCAAGAGTTAATCTAAAAGTTCTGTCAATATGTAGCATTGATGGTATTTTACGACCTCCTCCTGATTTTAGCGGATTCAATCAGCTAAAGACTCTTCATCTAATTCATGCTATCATCGATCCAAGTTTTACGTCAAATCTCTTTTCTGTCTTTGTGTCCCTCGAAAGCTTGACCTTATATCGCTGCAGGCTTGGTCGATATCTTGCTAATACTAGAACTGATCTGAATATTGTTGCCGGTGATCGTCTAACTGAACTGATAGTCATGGATTGCGGCCCAGCCAAAATCAAAATTTCTGCACAAAATCTCGCCTCCTTGGAATATATTAATAATCATTGGACCTCTCTTTCTATCAAAACTCCGCGTTTAGCAAGAATTTATTTGCCAGACACTGTTCACGATCCATTGTTACCTCATGTTCTAACACAATTTGCGACGTGTTCTGAGCTCGACTCTCTTTTTCTGCGGATGTACCCGGAAACCCTAATCAATTTCAGCATGCCAGCTTTTGGAAATTTGAGGAAATTGAAGGTGGATATCTGCATCGAATATGGTCGTCCATACAATGATGACAATCTTCTTCGCTTTCTGGATTTTCTCAAGGCTGCACCCGTTTTGGAAGAGCTTGTAACAGCTTTGATTGACCTCAAGTTTACTGACACTACTGATGAACGAGAGATAAGGAATGTTTCTGGATTTACACATGATAACTTGAAATTAGTTAAGATGAAGAGTTTCCACGGTCACTGGTCCGAAATAGAGTTTGCGATTTGTATTCTCAAGTACACAACAAATCTCAAGATAATGGAAATTGGGCCTTTCGCAAGAAGCGTTTCTGGTGACTACTTTCGGGAGAAGGTGAATTATCCAGAACGACCTAGGGCAATTATGAAAGAAAAAATCAAGGAAGTAAAGACCGATGCTCAAATTATATTTCTACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

415

Amino Acids

47.69

Weight (kDa)

6.87

Isoelectric Point (pI)

26.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 56 - 406 7.4e-29 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 63 - 168 5e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 186
AccB7I CCANNNNNTGG 1 cut(s) 812
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 667
AciI CCGC 4 cut(s) 375, 576, 665, 769
AclWI GGATC 4 cut(s) 193, 206, 416, 698
AcsI RAATTY 3 cut(s) 594, 678, 817
AcyI GRCGYC 1 cut(s) 183
AfaI GTAC 2 cut(s) 776, 1088
AfiI CCNNNNNNNGG 1 cut(s) 812
AflIII ACRYGT 1 cut(s) 740
AgsI TTSAA 4 cut(s) 227, 382, 832, 1018
AjiI CACGTC 1 cut(s) 741
AluBI AGCT 7 cut(s) 57, 388, 471, 751, 809, 928, 938
AluI AGCT 7 cut(s) 57, 388, 471, 751, 809, 928, 938
Alw21I GWGCWC 1 cut(s) 753
AlwI GGATC 4 cut(s) 193, 206, 416, 698
AlwNI CAGNNNCTG 1 cut(s) 695
AoxI GGCC 2 cut(s) 577, 1118
ApeKI GCWGC 3 cut(s) 66, 486, 908
ApoI RAATTY 3 cut(s) 594, 678, 817
AseI ATTAAT 1 cut(s) 630
Asp700I GAANNNNTTC 3 cut(s) 231, 1037, 1135
AspA2I CCTAGG 2 cut(s) 89, 1181
AspS9I GGNCC 4 cut(s) 578, 642, 1053, 1118
AsuC2I CCSGG 1 cut(s) 779
AsuHPI GGTGA 4 cut(s) 143, 554, 1154, 1174
AvaII GGWCC 2 cut(s) 642, 1053
AvrII CCTAGG 2 cut(s) 89, 1181
BamHI GGATCC 1 cut(s) 198
BanII GRGCYC 1 cut(s) 753
Bbv12I GWGCWC 1 cut(s) 753
BbvI GCAGC 3 cut(s) 78, 473, 895
BccI CCATC 2 cut(s) 189, 338
BclI TGATCA 1 cut(s) 166
BcnI CCSGG 1 cut(s) 779
BfaI CTAG 4 cut(s) 80, 90, 516, 1182
BfmI CTRYAG 1 cut(s) 487
BisI GCNGC 4 cut(s) 67, 487, 577, 909
BlnI CCTAGG 2 cut(s) 89, 1181
BlsI GCNGC 4 cut(s) 68, 488, 578, 910
Bme1390I CCNGG 1 cut(s) 779
Bme18I GGWCC 2 cut(s) 642, 1053
BmgBI CACGTC 1 cut(s) 741
BmgT120I GGNCC 4 cut(s) 578, 642, 1053, 1118
BmiI GGNNCC 1 cut(s) 200
BmrFI CCNGG 1 cut(s) 779
BmsI GCATC 3 cut(s) 34, 855, 1213
BplI GAGNNNNNCTC 2 cut(s) 740, 772
BpuEI CTTGAG 6 cut(s) 98, 289, 887, 935, 1067, 1085
BpuMI CCSGG 1 cut(s) 779
Bsa29I ATCGAT 1 cut(s) 420
BsaBI GATNNNNATC 1 cut(s) 876
BsaHI GRCGYC 1 cut(s) 183
BsaJI CCNNGG 5 cut(s) 89, 216, 618, 1042, 1181
Bsc4I CCNNNNNNNGG 1 cut(s) 812
Bse118I RCCGGY 1 cut(s) 539
Bse1I ACTGG 2 cut(s) 278, 1055
Bse8I GATNNNNATC 1 cut(s) 876
BseCI ATCGAT 1 cut(s) 420
BseDI CCNNGG 5 cut(s) 89, 216, 618, 1042, 1181
BseGI GGATG 1 cut(s) 777
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 1 cut(s) 812
BseMII CTCAG 1 cut(s) 738
BseNI ACTGG 2 cut(s) 278, 1055
BseRI GAGGAG 1 cut(s) 351
BseXI GCAGC 3 cut(s) 78, 473, 895
BseYI CCCAGC 1 cut(s) 580
BsgI GTGCAG 2 cut(s) 585, 894
Bsh1236I CGCG 1 cut(s) 667
BshFI GGCC 2 cut(s) 579, 1120
BshVI ATCGAT 1 cut(s) 420
BsiHKAI GWGCWC 1 cut(s) 753
BsiSI CCGG 3 cut(s) 63, 540, 779
BslFI GGGAC 1 cut(s) 445
BslI CCNNNNNNNGG 1 cut(s) 812
BsmFI GGGAC 1 cut(s) 445
BsnI GGCC 2 cut(s) 579, 1120
Bsp1286I GDGCHC 1 cut(s) 753
Bsp143I GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
BspACI CCGC 4 cut(s) 375, 576, 665, 769
BspANI GGCC 2 cut(s) 579, 1120
BspCNI CTCAG 1 cut(s) 739
BspDI ATCGAT 1 cut(s) 420
BspFNI CGCG 1 cut(s) 667
BspLI GGNNCC 1 cut(s) 200
BspMAI CTGCAG 1 cut(s) 491
BspPI GGATC 4 cut(s) 193, 206, 416, 698
BspQI GCTCTTC 1 cut(s) 918
BsrFI RCCGGY 1 cut(s) 539
BsrI ACTGG 2 cut(s) 278, 1055
BssAI RCCGGY 1 cut(s) 539
BssECI CCNNGG 5 cut(s) 89, 216, 618, 1042, 1181
BssMI GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
BssNI GRCGYC 1 cut(s) 183
BssT1I CCWWGG 4 cut(s) 89, 216, 618, 1181
Bst4CI ACNGT 4 cut(s) 123, 154, 697, 1046
Bst6I CTCTTC 3 cut(s) 402, 918, 1028
BstACI GRCGYC 1 cut(s) 183
BstC8I GCNNGC 4 cut(s) 301, 491, 803, 807
BstDEI CTNAG 1 cut(s) 747
BstDSI CCRYGG 1 cut(s) 1042
BstF5I GGATG 1 cut(s) 777
BstFNI CGCG 1 cut(s) 667
BstKTI GATC 7 cut(s) 54, 169, 201, 424, 526, 547, 706
BstMBI GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
BstMWI GCNNNNNNNGC 1 cut(s) 63
BstNSI RCATGY 1 cut(s) 805
BstSCI CCNGG 1 cut(s) 777
BstSFI CTRYAG 1 cut(s) 487
BstUI CGCG 1 cut(s) 667
BstV1I GCAGC 3 cut(s) 78, 473, 895
BstX2I RGATCY 1 cut(s) 198
BstYI RGATCY 1 cut(s) 198
Bsu15I ATCGAT 1 cut(s) 420
BsuRI GGCC 2 cut(s) 579, 1120
BsuTUI ATCGAT 1 cut(s) 420
BtgI CCRYGG 1 cut(s) 1042
BtrI CACGTC 1 cut(s) 741
BtsCI GGATG 1 cut(s) 777
BtsIMutI CAGTG 5 cut(s) 159, 162, 271, 693, 1048
Cac8I GCNNGC 4 cut(s) 301, 491, 803, 807
CaiI CAGNNNCTG 1 cut(s) 695
Cfr10I RCCGGY 1 cut(s) 539
Cfr13I GGNCC 4 cut(s) 578, 642, 1053, 1118
ClaI ATCGAT 1 cut(s) 420
Csp6I GTAC 2 cut(s) 775, 1087
CviAII CATG 5 cut(s) 410, 568, 719, 802, 1007
CviQI GTAC 2 cut(s) 775, 1087
DdeI CTNAG 1 cut(s) 747
DpnI GATC 7 cut(s) 53, 168, 200, 423, 525, 546, 705
DpnII GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
Eam1104I CTCTTC 3 cut(s) 402, 918, 1028
EarI CTCTTC 3 cut(s) 402, 918, 1028
Ecl136II GAGCTC 1 cut(s) 751
Eco130I CCWWGG 4 cut(s) 89, 216, 618, 1181
Eco24I GRGCYC 1 cut(s) 753
Eco32I GATATC 2 cut(s) 503, 841
Eco47I GGWCC 2 cut(s) 642, 1053
Eco53kI GAGCTC 1 cut(s) 751
EcoICRI GAGCTC 1 cut(s) 751
EcoRV GATATC 2 cut(s) 503, 841
EcoT14I CCWWGG 4 cut(s) 89, 216, 618, 1181
EcoT38I GRGCYC 1 cut(s) 753
ErhI CCWWGG 4 cut(s) 89, 216, 618, 1181
FaeI CATG 5 cut(s) 413, 571, 722, 805, 1010
FaqI GGGAC 1 cut(s) 445
FatI CATG 5 cut(s) 409, 567, 718, 801, 1006
FbaI TGATCA 1 cut(s) 166
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 4 cut(s) 67, 487, 577, 909
FokI GGATG 1 cut(s) 784
FriOI GRGCYC 1 cut(s) 753
Fsp4HI GCNGC 4 cut(s) 67, 487, 577, 909
FspBI CTAG 4 cut(s) 80, 90, 516, 1182
GluI GCNGC 4 cut(s) 67, 487, 577, 909
GsaI CCCAGC 1 cut(s) 584
HaeIII GGCC 2 cut(s) 579, 1120
HapII CCGG 3 cut(s) 63, 540, 779
Hin1I GRCGYC 1 cut(s) 183
Hin1II CATG 5 cut(s) 413, 571, 722, 805, 1010
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 1 cut(s) 469
HinfI GANTC 4 cut(s) 143, 378, 394, 755
HpaII CCGG 3 cut(s) 63, 540, 779
HphI GGTGA 4 cut(s) 143, 554, 1154, 1174
Hpy166II GTNNAC 6 cut(s) 142, 162, 295, 700, 957, 1089
Hpy188I TCNGA 4 cut(s) 286, 528, 748, 1057
Hpy188III TCNNGA 9 cut(s) 170, 306, 365, 701, 893, 996, 1102, 1154, 1172
Hpy8I GTNNAC 6 cut(s) 142, 162, 295, 700, 957, 1089
Hpy99I CGWCG 2 cut(s) 185, 742
HpyAV CCTTC 3 cut(s) 167, 826, 1153
HpyCH4III ACNGT 4 cut(s) 123, 154, 697, 1046
HpyCH4IV ACGT 4 cut(s) 183, 249, 434, 740
HpyCH4V TGCA 6 cut(s) 20, 47, 489, 602, 846, 911
HpyF10VI GCNNNNNNNGC 1 cut(s) 63
HpyF3I CTNAG 1 cut(s) 747
HpySE526I ACGT 4 cut(s) 183, 249, 434, 740
Hsp92I GRCGYC 1 cut(s) 183
Hsp92II CATG 5 cut(s) 413, 571, 722, 805, 1010
Ksp22I TGATCA 1 cut(s) 166
Kzo9I GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
LguI GCTCTTC 1 cut(s) 918
Lsp1109I GCAGC 3 cut(s) 78, 473, 895
LweI GCATC 3 cut(s) 34, 855, 1213
MaeI CTAG 4 cut(s) 80, 90, 516, 1182
MaeII ACGT 4 cut(s) 183, 249, 434, 740
MaeIII GTNAC 6 cut(s) 131, 276, 711, 931, 1046, 1142
MalI GATC 7 cut(s) 53, 168, 200, 423, 525, 546, 705
MboI GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
MboII GAAGA 7 cut(s) 230, 239, 389, 872, 875, 935, 1045
MflI RGATCY 1 cut(s) 198
MhlI GDGCHC 1 cut(s) 753
MlyI GAGTC 3 cut(s) 137, 388, 749
MnlI CCTC 9 cut(s) 279, 369, 372, 473, 625, 655, 726, 816, 959
MroXI GAANNNNTTC 3 cut(s) 231, 1037, 1135
MseI TTAA 4 cut(s) 9, 312, 630, 1026
MspI CCGG 3 cut(s) 63, 540, 779
MspR9I CCNGG 1 cut(s) 779
MvnI CGCG 1 cut(s) 667
MwoI GCNNNNNNNGC 1 cut(s) 63
NciI CCSGG 1 cut(s) 779
NdeII GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
NlaIII CATG 5 cut(s) 413, 571, 722, 805, 1010
NlaIV GGNNCC 1 cut(s) 200
NmuCI GTSAC 3 cut(s) 131, 1046, 1142
NspI RCATGY 1 cut(s) 805
PaeI GCATGC 1 cut(s) 805
PciSI GCTCTTC 1 cut(s) 918
PcsI WCGNNNNNNNCGW 1 cut(s) 1131
PdmI GAANNNNTTC 3 cut(s) 231, 1037, 1135
PfeI GAWTC 1 cut(s) 378
PflFI GACNNNGTC 1 cut(s) 137
PflMI CCANNNNNTGG 1 cut(s) 812
PkrI GCNGC 4 cut(s) 68, 488, 578, 910
PleI GAGTC 3 cut(s) 137, 388, 749
PpsI GAGTC 3 cut(s) 137, 388, 749
PshBI ATTAAT 1 cut(s) 630
Psp124BI GAGCTC 1 cut(s) 753
PspFI CCCAGC 1 cut(s) 580
PspN4I GGNNCC 1 cut(s) 200
PspPI GGNCC 4 cut(s) 578, 642, 1053, 1118
PstI CTGCAG 1 cut(s) 491
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 1 cut(s) 198
PsyI GACNNNGTC 1 cut(s) 137
RsaI GTAC 2 cut(s) 776, 1088
RsaNI GTAC 2 cut(s) 775, 1087
SacI GAGCTC 1 cut(s) 753
SalI GTCGAC 1 cut(s) 140
SapI GCTCTTC 1 cut(s) 918
SaqAI TTAA 4 cut(s) 9, 312, 630, 1026
SatI GCNGC 4 cut(s) 67, 487, 577, 909
Sau3AI GATC 7 cut(s) 51, 166, 198, 421, 523, 544, 703
Sau96I GGNCC 4 cut(s) 578, 642, 1053, 1118
SchI GAGTC 3 cut(s) 137, 388, 749
ScrFI CCNGG 1 cut(s) 779
SduI GDGCHC 1 cut(s) 753
SfaNI GCATC 3 cut(s) 34, 855, 1213
SfcI CTRYAG 1 cut(s) 487
SinI GGWCC 2 cut(s) 642, 1053
SmlI CTYRAG 6 cut(s) 113, 304, 902, 950, 1082, 1100
SmoI CTYRAG 6 cut(s) 113, 304, 902, 950, 1082, 1100
SphI GCATGC 1 cut(s) 805
SsiI CCGC 4 cut(s) 375, 576, 665, 769
SspI AATATT 1 cut(s) 532
SspMI CTAG 4 cut(s) 80, 90, 516, 1182
SstI GAGCTC 1 cut(s) 753
StyD4I CCNGG 1 cut(s) 777
StyI CCWWGG 4 cut(s) 89, 216, 618, 1181
TaaI ACNGT 4 cut(s) 123, 154, 697, 1046
TaiI ACGT 4 cut(s) 186, 252, 437, 743
TaqI TCGA 7 cut(s) 141, 241, 420, 465, 499, 753, 849
TaqII GACCGA 2 cut(s) 207, 1235
TatI WGTACW 1 cut(s) 1086
TauI GCSGC 1 cut(s) 579
TfiI GAWTC 1 cut(s) 378
Tru1I TTAA 4 cut(s) 9, 312, 630, 1026
Tru9I TTAA 4 cut(s) 9, 312, 630, 1026
TscAI CASTG 5 cut(s) 159, 169, 278, 700, 1055
TseFI GTSAC 3 cut(s) 131, 1046, 1142
TseI GCWGC 3 cut(s) 66, 486, 908
Tsp45I GTSAC 3 cut(s) 131, 1046, 1142
TspDTI ATGAA 6 cut(s) 224, 389, 398, 987, 1046, 1208
TspGWI ACGGA 1 cut(s) 191
TspRI CASTG 5 cut(s) 159, 169, 278, 700, 1055
Tth111I GACNNNGTC 1 cut(s) 137
Van91I CCANNNNNTGG 1 cut(s) 812
VpaK11BI GGWCC 2 cut(s) 642, 1053
VspI ATTAAT 1 cut(s) 630
XapI RAATTY 3 cut(s) 594, 678, 817
XceI RCATGY 1 cut(s) 805
XmaJI CCTAGG 2 cut(s) 89, 1181
XmiI GTMKAC 1 cut(s) 141
XmnI GAANNNNTTC 3 cut(s) 231, 1037, 1135
XspI CTAG 4 cut(s) 80, 90, 516, 1182
ZraI GACGTC 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.