Rh6AG174900

Histone H2A

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000084
Physical Location & Seq
Reverse (-)
28385310 .. 28412220
26911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG174900.1

Sequence Viewer

Length: 1506 bp
ATGGGTGTTCCAGAGGGATCTGAAGTGCAAGCCAGAGGAAGGAAGGGCGATAGCCCCAAGAAGAAGGCGGTGACTCGTTCCGTCAAAGCTGGTCTACAATTTCCGGTCGGTAGGATTGGCCGCTACTTAAAGAAGGGAAGGTATGCTCAGCGTGTCAGCTCTGGTGCTCCGGTCTACTTGGCCGGGTGCTTGATTCAGGTGCTGGAGTTGTCTGGAAATGCAGCTCGGGGCAACAAGAAGAACATGATTATCCCAAGGCATCTGTTATTGGCTGTGAGGAATGACGAAGGGCTTGGCTTCTTGCTGGGGTTACTATTGGTCATGGAGTTGCGCTTCAATCAGGGAGAAGCCGAGCAACTTTTTGACTTTTCAATTATATGTCGTTTTGGTCTCACTGATCTTGCATCATGTTTGTTCTTTGACTTGAATGAGGATGCAAGTAGTGATGATCATGGGGATGTTTCAAACAATATAGGTGAAGCTAGGGAAAGCAAAACATCTACAGAAGGGAAAGAACAGACCGCAACCAGGAGCGGTGCAGTCAGGCAATATGTTCGATCAAAAATGCCAAGGCTTCGTTGGACTTCTGATTTCCATGTAGCATTCATTCATGCCGTTGAGAGGCTCGGAGGACAAGAAAGCATGGATGGATCGTATGAACCTTCAATATCTGATATTGATTTGGTGTCCCAAAGTTCGATAAATGGAAGTGACTGTAATGAAATGCAATATAAGGGAGTTCGGTATGATAAGTTGTCTACAAAAGATCTTAAAGGGCAGGAGTTTAAGACTGTGGAGGAAGCTAAGTCCTTTTACAATGCTTATGCAAAGGCCATGGGTTTTGATGTTAGAAGCGACTACAAGAGATTAAATCATGCAGGTACTATGTTCACTGATAGTATGTTTGAGCATGTACGTAACGGGATTGATGGGGTCGGCGATTTAATAACATCTCGAACTATGGTGTTTGGTTCAAGTCGTGTATACTTTACATCTAGTTACAATGACAACAAACAAGAGATTGAGTACACGAAAGTTTACTATCCTGATGAAAACAATCCTCGTATGGAGTGTTCATCTAAGCTGTTTGAATGCGAAGGCATTCCATGTTGTCATATATTTAACGTTATGAAACATGAGCGTATGAATGAGATTCCTTCATCCTTATTAATGAAGAGGTGGACGAAGTCTGCAAAATCTGATATGCAAATATCAGTTCATGGAGACAACGTCCCTAATGAAGCTATGGAATTTTCCAGGTACGGCGATTTAAATTGTTTTGGAAGTAAAATGTGTTTTCTTGCATCGAAAACAAAAGAGGGCACGGACATCCTAAACAGAGAATTCATCAGACTAGAGCCCATACTATCAGACTTGTGGAAGCAACAGAAAGAAAAAATTGTTACTCCAGAGCACTGTAGTAATATTATAAAAGATCCAATCAAGGGTGAAGGCGGGCTTCAATCACCATCCTTGGATACAATGCCAAAGAACTTCGCCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04217 ko05034 ko05322 map04217 map05034 map05322
Pfam Domains
Protein Families
Histone Histone_H2A_C

Protein Analysis

501

Amino Acids

56.26

Weight (kDa)

7.53

Isoelectric Point (pI)

44.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1430
Acc36I ACCTGC 1 cut(s) 869
AccBSI CCGCTC 1 cut(s) 534
AccI GTMKAC 4 cut(s) 94, 174, 758, 984
AciI CCGC 5 cut(s) 68, 121, 522, 534, 1455
AclI AACGTT 1 cut(s) 1125
AclWI GGATC 3 cut(s) 25, 658, 1430
AcoI YGGCCR 2 cut(s) 118, 180
AcsI RAATTY 2 cut(s) 1250, 1343
AcuI CTGAAG 1 cut(s) 42
AfaI GTAC 4 cut(s) 883, 915, 1028, 1262
AfiI CCNNNNNNNGG 4 cut(s) 39, 528, 621, 1445
AgsI TTSAA 8 cut(s) 337, 372, 427, 465, 666, 975, 1091, 1463
AjnI CCWGG 2 cut(s) 527, 1256
AluBI AGCT 7 cut(s) 89, 159, 224, 482, 803, 1084, 1244
AluI AGCT 7 cut(s) 89, 159, 224, 482, 803, 1084, 1244
Alw21I GWGCWC 2 cut(s) 169, 1416
Alw26I GTCTC 2 cut(s) 395, 1218
AlwI GGATC 3 cut(s) 25, 658, 1430
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 1 cut(s) 225
AoxI GGCC 3 cut(s) 118, 180, 831
ApeKI GCWGC 1 cut(s) 221
ApoI RAATTY 2 cut(s) 1250, 1343
AseI ATTAAT 1 cut(s) 1169
Asp700I GAANNNNTTC 1 cut(s) 1101
AspLEI GCGC 1 cut(s) 333
AsuC2I CCSGG 1 cut(s) 184
AsuHPI GGTGA 4 cut(s) 82, 488, 1458, 1460
AvaI CYCGRG 1 cut(s) 225
BaeGI GKGCMC 1 cut(s) 1325
BanII GRGCYC 1 cut(s) 1362
Bbv12I GWGCWC 2 cut(s) 169, 1416
BbvI GCAGC 1 cut(s) 233
BccI CCATC 3 cut(s) 641, 923, 1477
BceAI ACGGC 2 cut(s) 599, 1279
BcgI CGANNNNNNTGC 2 cut(s) 536, 570
BciT130I CCWGG 2 cut(s) 529, 1258
BciVI GTATCC 1 cut(s) 1471
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 1 cut(s) 184
BcoDI GTCTC 2 cut(s) 395, 1218
BfaI CTAG 3 cut(s) 483, 996, 1355
BfmI CTRYAG 2 cut(s) 501, 1417
BfuAI ACCTGC 1 cut(s) 869
BfuI GTATCC 1 cut(s) 1471
BglII AGATCT 1 cut(s) 766
BisI GCNGC 2 cut(s) 121, 222
BlpI GCTNAGC 1 cut(s) 147
BlsI GCNGC 2 cut(s) 122, 223
Bme1390I CCNGG 3 cut(s) 184, 529, 1258
BmeT110I CYCGRG 1 cut(s) 225
BmrFI CCNGG 3 cut(s) 184, 529, 1258
BmsI GCATC 4 cut(s) 268, 413, 424, 1313
BpmI CTGGAG 2 cut(s) 224, 1392
Bpu1102I GCTNAGC 1 cut(s) 147
BpuMI CCSGG 1 cut(s) 184
BsaAI YACGTR 1 cut(s) 917
BsaI GGTCTC 1 cut(s) 395
BsaJI CCNNGG 4 cut(s) 254, 569, 834, 1473
BsaWI WCCGGW 2 cut(s) 103, 169
BsaXI ACNNNNNCTCC 2 cut(s) 1215, 1245
Bsc4I CCNNNNNNNGG 4 cut(s) 39, 528, 621, 1445
BseBI CCWGG 2 cut(s) 529, 1258
BseDI CCNNGG 4 cut(s) 254, 569, 834, 1473
BseGI GGATG 6 cut(s) 439, 463, 652, 1160, 1329, 1469
BseLI CCNNNNNNNGG 4 cut(s) 39, 528, 621, 1445
BseMII CTCAG 1 cut(s) 161
BseSI GKGCMC 1 cut(s) 1325
BseXI GCAGC 1 cut(s) 233
BseYI CCCAGC 1 cut(s) 304
BsgI GTGCAG 1 cut(s) 558
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 3 cut(s) 120, 182, 833
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 2 cut(s) 169, 1416
BsiHKCI CYCGRG 1 cut(s) 225
BsiSI CCGG 3 cut(s) 104, 170, 183
BslFI GGGAC 2 cut(s) 673, 1217
BslI CCNNNNNNNGG 4 cut(s) 39, 528, 621, 1445
BsmAI GTCTC 2 cut(s) 395, 1218
BsmFI GGGAC 2 cut(s) 673, 1217
BsmI GAATGC 3 cut(s) 602, 1097, 1101
BsnI GGCC 3 cut(s) 120, 182, 833
Bso31I GGTCTC 1 cut(s) 395
BsoBI CYCGRG 1 cut(s) 225
Bsp1286I GDGCHC 4 cut(s) 169, 1325, 1362, 1416
Bsp143I GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
Bsp1720I GCTNAGC 1 cut(s) 147
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 5 cut(s) 68, 121, 522, 534, 1455
BspANI GGCC 3 cut(s) 120, 182, 833
BspCNI CTCAG 1 cut(s) 160
BspMI ACCTGC 1 cut(s) 869
BspPI GGATC 3 cut(s) 25, 658, 1430
BspTNI GGTCTC 1 cut(s) 395
BsrBI CCGCTC 1 cut(s) 534
BssECI CCNNGG 4 cut(s) 254, 569, 834, 1473
BssMI GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
BssNAI GTATAC 1 cut(s) 985
BssT1I CCWWGG 4 cut(s) 254, 569, 834, 1473
Bst1107I GTATAC 1 cut(s) 985
Bst2UI CCWGG 2 cut(s) 529, 1258
Bst4CI ACNGT 3 cut(s) 716, 793, 1418
Bst6I CTCTTC 1 cut(s) 1169
BstBAI YACGTR 1 cut(s) 917
BstC8I GCNNGC 2 cut(s) 30, 1457
BstDEI CTNAG 3 cut(s) 147, 804, 1080
BstDSI CCRYGG 1 cut(s) 834
BstF5I GGATG 6 cut(s) 439, 463, 652, 1160, 1329, 1469
BstHHI GCGC 1 cut(s) 333
BstKTI GATC 7 cut(s) 20, 400, 451, 560, 653, 769, 1438
BstMAI GTCTC 2 cut(s) 395, 1218
BstMBI GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
BstMCI CGRYCG 1 cut(s) 108
BstNI CCWGG 2 cut(s) 529, 1258
BstNSI RCATGY 1 cut(s) 914
BstSCI CCNGG 3 cut(s) 182, 527, 1256
BstSFI CTRYAG 2 cut(s) 501, 1417
BstSLI GKGCMC 1 cut(s) 1325
BstSNI TACGTA 1 cut(s) 917
BstV1I GCAGC 1 cut(s) 233
BstX2I RGATCY 3 cut(s) 17, 766, 1435
BstYI RGATCY 3 cut(s) 17, 766, 1435
BstZ17I GTATAC 1 cut(s) 985
BsuI GTATCC 1 cut(s) 1471
BsuRI GGCC 3 cut(s) 120, 182, 833
BtgI CCRYGG 1 cut(s) 834
BtsCI GGATG 6 cut(s) 439, 463, 652, 1160, 1329, 1469
BtsIMutI CAGTG 3 cut(s) 393, 891, 1414
BveI ACCTGC 1 cut(s) 869
Cac8I GCNNGC 2 cut(s) 30, 1457
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 1 cut(s) 333
Csp6I GTAC 4 cut(s) 882, 914, 1027, 1261
CviQI GTAC 4 cut(s) 882, 914, 1027, 1261
DdeI CTNAG 3 cut(s) 147, 804, 1080
DpnI GATC 7 cut(s) 19, 399, 450, 559, 652, 768, 1437
DpnII GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
DraI TTTAAA 1 cut(s) 1272
EaeI YGGCCR 2 cut(s) 118, 180
Eam1104I CTCTTC 1 cut(s) 1169
EarI CTCTTC 1 cut(s) 1169
Eco105I TACGTA 1 cut(s) 917
Eco130I CCWWGG 4 cut(s) 254, 569, 834, 1473
Eco24I GRGCYC 1 cut(s) 1362
Eco31I GGTCTC 1 cut(s) 395
Eco57I CTGAAG 1 cut(s) 42
Eco88I CYCGRG 1 cut(s) 225
EcoRI GAATTC 1 cut(s) 1343
EcoRII CCWGG 2 cut(s) 527, 1256
EcoT14I CCWWGG 4 cut(s) 254, 569, 834, 1473
EcoT38I GRGCYC 1 cut(s) 1362
ErhI CCWWGG 4 cut(s) 254, 569, 834, 1473
FalI AAGNNNNNCTT 2 cut(s) 1443, 1475
FaqI GGGAC 2 cut(s) 673, 1217
FauI CCCGC 1 cut(s) 1448
FbaI TGATCA 1 cut(s) 448
FblI GTMKAC 4 cut(s) 94, 174, 758, 984
Fnu4HI GCNGC 2 cut(s) 121, 222
FokI GGATG 6 cut(s) 446, 470, 659, 1147, 1316, 1456
FriOI GRGCYC 1 cut(s) 1362
Fsp4HI GCNGC 2 cut(s) 121, 222
FspBI CTAG 3 cut(s) 483, 996, 1355
GlaI GCGC 1 cut(s) 332
GluI GCNGC 2 cut(s) 121, 222
GsaI CCCAGC 1 cut(s) 308
GsuI CTGGAG 2 cut(s) 224, 1392
HaeIII GGCC 3 cut(s) 120, 182, 833
HapII CCGG 3 cut(s) 104, 170, 183
HhaI GCGC 1 cut(s) 333
Hin6I GCGC 1 cut(s) 331
HinP1I GCGC 1 cut(s) 331
HinfI GANTC 3 cut(s) 73, 193, 1153
HpaII CCGG 3 cut(s) 104, 170, 183
HphI GGTGA 4 cut(s) 82, 488, 1458, 1460
Hpy166II GTNNAC 8 cut(s) 95, 175, 759, 891, 985, 1029, 1039, 1182
Hpy188I TCNGA 7 cut(s) 22, 589, 629, 673, 1201, 1352, 1372
Hpy188III TCNNGA 5 cut(s) 11, 213, 954, 1046, 1409
Hpy8I GTNNAC 8 cut(s) 95, 175, 759, 891, 985, 1029, 1039, 1182
HpyCH4III ACNGT 3 cut(s) 716, 793, 1418
HpyCH4IV ACGT 3 cut(s) 916, 1125, 1230
HpyF3I CTNAG 3 cut(s) 147, 804, 1080
HpySE526I ACGT 3 cut(s) 916, 1125, 1230
HspAI GCGC 1 cut(s) 331
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
LmnI GCTCC 2 cut(s) 172, 531
Lsp1109I GCAGC 1 cut(s) 233
LweI GCATC 4 cut(s) 268, 413, 424, 1313
MaeI CTAG 3 cut(s) 483, 996, 1355
MaeII ACGT 3 cut(s) 916, 1125, 1230
MaeIII GTNAC 6 cut(s) 70, 309, 710, 917, 998, 1402
MalI GATC 7 cut(s) 19, 399, 450, 559, 652, 768, 1437
MbiI CCGCTC 1 cut(s) 534
MboI GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
MboII GAAGA 3 cut(s) 73, 250, 1186
MflI RGATCY 3 cut(s) 17, 766, 1435
MhlI GDGCHC 4 cut(s) 169, 1325, 1362, 1416
MluCI AATT 6 cut(s) 98, 372, 1250, 1273, 1343, 1398
MlyI GAGTC 1 cut(s) 67
MmeI TCCRAC 1 cut(s) 560
MroXI GAANNNNTTC 1 cut(s) 1101
MseI TTAA 8 cut(s) 128, 771, 786, 869, 944, 1122, 1169, 1271
MslI CAYNNNNRTG 1 cut(s) 456
MspI CCGG 3 cut(s) 104, 170, 183
MspR9I CCNGG 3 cut(s) 184, 529, 1258
Mva1269I GAATGC 3 cut(s) 602, 1097, 1101
MvaI CCWGG 2 cut(s) 529, 1258
NciI CCSGG 1 cut(s) 184
NcoI CCATGG 1 cut(s) 834
NdeII GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
NmeAIII GCCGAG 1 cut(s) 376
NmuCI GTSAC 2 cut(s) 70, 710
NspI RCATGY 1 cut(s) 914
PctI GAATGC 3 cut(s) 602, 1097, 1101
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 2 cut(s) 193, 1153
PflFI GACNNNGTC 2 cut(s) 1186, 1229
PkrI GCNGC 2 cut(s) 122, 223
PleI GAGTC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 67
Ppu21I YACGTR 1 cut(s) 917
PshBI ATTAAT 1 cut(s) 1169
PsiI TTATAA 1 cut(s) 1430
Psp1406I AACGTT 1 cut(s) 1125
Psp6I CCWGG 2 cut(s) 527, 1256
PspFI CCCAGC 1 cut(s) 304
PspGI CCWGG 2 cut(s) 527, 1256
PsrI GAACNNNNNNTAC 2 cut(s) 1057, 1089
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 3 cut(s) 17, 766, 1435
PsyI GACNNNGTC 2 cut(s) 1186, 1229
RsaI GTAC 4 cut(s) 883, 915, 1028, 1262
RsaNI GTAC 4 cut(s) 882, 914, 1027, 1261
RseI CAYNNNNRTG 1 cut(s) 456
SaqAI TTAA 8 cut(s) 128, 771, 786, 869, 944, 1122, 1169, 1271
SatI GCNGC 2 cut(s) 121, 222
Sau3AI GATC 7 cut(s) 17, 397, 448, 557, 650, 766, 1435
SchI GAGTC 1 cut(s) 67
ScrFI CCNGG 3 cut(s) 184, 529, 1258
SduI GDGCHC 4 cut(s) 169, 1325, 1362, 1416
SfaNI GCATC 4 cut(s) 268, 413, 424, 1313
SfcI CTRYAG 2 cut(s) 501, 1417
SmiI ATTTAAAT 1 cut(s) 1272
SmiMI CAYNNNNRTG 1 cut(s) 456
SnaBI TACGTA 1 cut(s) 917
Sse9I AATT 6 cut(s) 98, 372, 1250, 1273, 1343, 1398
SsiI CCGC 5 cut(s) 68, 121, 522, 534, 1455
SspI AATATT 1 cut(s) 1426
SspMI CTAG 3 cut(s) 483, 996, 1355
StyD4I CCNGG 3 cut(s) 182, 527, 1256
StyI CCWWGG 4 cut(s) 254, 569, 834, 1473
SwaI ATTTAAAT 1 cut(s) 1272
TaaI ACNGT 3 cut(s) 716, 793, 1418
TaiI ACGT 3 cut(s) 919, 1128, 1233
TaqI TCGA 4 cut(s) 556, 698, 955, 1307
TasI AATT 6 cut(s) 98, 372, 1250, 1273, 1343, 1398
TatI WGTACW 1 cut(s) 1026
TauI GCSGC 1 cut(s) 123
TfiI GAWTC 2 cut(s) 193, 1153
Tru1I TTAA 8 cut(s) 128, 771, 786, 869, 944, 1122, 1169, 1271
Tru9I TTAA 8 cut(s) 128, 771, 786, 869, 944, 1122, 1169, 1271
TscAI CASTG 3 cut(s) 400, 898, 1421
TseFI GTSAC 2 cut(s) 70, 710
TseI GCWGC 1 cut(s) 221
Tsp45I GTSAC 2 cut(s) 70, 710
TspGWI ACGGA 2 cut(s) 70, 1340
TspRI CASTG 3 cut(s) 400, 898, 1421
Tth111I GACNNNGTC 2 cut(s) 1186, 1229
VspI ATTAAT 1 cut(s) 1169
XapI RAATTY 2 cut(s) 1250, 1343
XceI RCATGY 1 cut(s) 914
XcmI CCANNNNNNNNNTGG 1 cut(s) 576
XmiI GTMKAC 4 cut(s) 94, 174, 758, 984
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 3 cut(s) 483, 996, 1355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.