Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000084

Physical Location & Seq

Genomic Coordinates Reverse (-)

29248897 .. 29284325

Gene Structure 35429 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00105780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 978 bp

ATGAAGGGAAAGGGTGGGGATAGGGAAATGGGGACAGAAGATTTCGGTCCCGGGGCCCACTCACTATATGTGTGGAGAGAAATTAAAGATAGTGGAGAAATTTCTCAATATACTCAGAGTAGATCTACCAGGAGGTGGCCTCTTCTTAAGGTTTATATGCTAAGAGAATCCAATGTCGTCGGTGTCGCGCTTCATCGGAGCGAGATCCATTGGTGTGAGAATTTTCTGGTTTGTTTAGACGGGAGTGGGGAGGCACGTAAAGAAAGTCGAAAGAAACACCGGCCGCAAGTCACGTATTTGAATTTATATGATGATGCTGCTAGGCTCAAGGTTGCCATTGCTGCCGCCTCCACAAACGATGTCGTCGGCTCGGTCATTGCTCGTCTCAATAGAGCTATACAAGACGAGCGTTACCGAGGAAGCGCATTTTTCCGGGATAATGCCGGTGCCGGATTGCGCGATTGGCTTCTCGGGCACCAAACCAAAGTCTCCGTCGTTGTTGCCATCCTCATCTCCTCGAGATCGGGTTTCCGGCTGCCAGGCCCCGGTGGCTTGAGCTTTGCTCCGAAATCCCCAATTCCAAGGGTCTCATCTCGGCGAGCTTCAAATTGGTCCTCATCGTCTTCCACTCCAACTCCACTAGTCCGTGAAGACTCAAATCTCCTTGATTTATGGGAATTTTCTGAAAATTCCCAAAAAGAATCAGAAATTTCAAAAAAGGGCCCGAGCCCCTCTCTCTTCTTCGCTCTCGACCTCTCTTCGGCACAGCTTGTGCTCCGGTGGTTAGGGGCAAGGTTTTTGTGCGAAGGTCAAGGTATACAGTCTTTATCCTTGTCATATGATCTTTATTGGTTCGAGCATAGTATCTATGTACTATGTTTTAAGGTGAACGGTGTCTTAGCACTAGTGATTGACGGAGAGGAAATCAAGCAATTAGCAATTACCATCAATCAGCATGGATTACGGACCAATCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0000304 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0006979 GO:0007154 GO:0007584 GO:0008150 GO:0008219 GO:0009579 GO:0009605 GO:0009987 GO:0009991 GO:0010035 GO:0010343 GO:0012501 GO:0016020 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0033554 GO:0034357 GO:0034599 GO:0034614 GO:0035690 GO:0036473 GO:0042221 GO:0042493 GO:0042651 GO:0044424 GO:0044436 GO:0044464 GO:0050896 GO:0051716 GO:0070887 GO:0071452 GO:0071496 GO:0097468 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3506 UVR

Protein Analysis

325

Amino Acids

36.29

Weight (kDa)

9.33

Isoelectric Point (pI)

45.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29034
fragaria_vesca	FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica	MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica	Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis	pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis	RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata	RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora	Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii	Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa	Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha	Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana	Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	446, 474
AccB7I	CCANNNNNTGG	1 cut(s)	135
AccI	GTMKAC	1 cut(s)	817
AccII	CGCG	2 cut(s)	188, 459
AciI	CCGC	2 cut(s)	284, 345
AclWI	GGATC	1 cut(s)	199
AcoI	YGGCCR	1 cut(s)	281
AcsI	RAATTY	6 cut(s)	99, 220, 301, 677, 688, 708
AfaI	GTAC	1 cut(s)	873
AfiI	CCNNNNNNNGG	3 cut(s)	135, 545, 760
AflII	CTTAAG	1 cut(s)	146
AgsI	TTSAA	3 cut(s)	301, 606, 714
AhlI	ACTAGT	2 cut(s)	640, 904
AjnI	CCWGG	2 cut(s)	128, 538
AluBI	AGCT	4 cut(s)	395, 558, 602, 769
AluI	AGCT	4 cut(s)	395, 558, 602, 769
Alw21I	GWGCWC	1 cut(s)	777
Alw26I	GTCTC	3 cut(s)	389, 493, 592
AlwI	GGATC	1 cut(s)	199
Ama87I	CYCGRG	4 cut(s)	50, 470, 517, 724
AoxI	GGCC	5 cut(s)	54, 137, 281, 541, 721
ApaI	GGGCCC	2 cut(s)	58, 725
ApeKI	GCWGC	3 cut(s)	317, 341, 535
ApoI	RAATTY	6 cut(s)	99, 220, 301, 677, 688, 708
ArsI	GACNNNNNNTTYG	2 cut(s)	477, 509
AspLEI	GCGC	3 cut(s)	190, 425, 459
AspS9I	GGNCC	8 cut(s)	47, 54, 55, 542, 612, 721, 722, 966
AsuC2I	CCSGG	4 cut(s)	51, 52, 434, 546
AsuHPI	GGTGA	1 cut(s)	898
AvaI	CYCGRG	4 cut(s)	50, 470, 517, 724
AvaII	GGWCC	3 cut(s)	47, 612, 966
BaeGI	GKGCMC	3 cut(s)	58, 477, 725
BanI	GGYRCC	2 cut(s)	446, 474
BanII	GRGCYC	3 cut(s)	58, 725, 731
BbsI	GAAGAC	2 cut(s)	615, 657
Bbv12I	GWGCWC	1 cut(s)	777
BbvI	GCAGC	3 cut(s)	304, 328, 522
BccI	CCATC	2 cut(s)	512, 953
BciT130I	CCWGG	2 cut(s)	130, 540
BcnI	CCSGG	4 cut(s)	51, 52, 434, 546
BcoDI	GTCTC	3 cut(s)	389, 493, 592
BcuI	ACTAGT	2 cut(s)	640, 904
BfaI	CTAG	3 cut(s)	321, 641, 905
BfrI	CTTAAG	1 cut(s)	146
BglI	GCCNNNNNGGC	1 cut(s)	549
BglII	AGATCT	1 cut(s)	122
BisI	GCNGC	5 cut(s)	284, 318, 342, 345, 536
BlsI	GCNGC	5 cut(s)	285, 319, 343, 346, 537
Bme1390I	CCNGG	6 cut(s)	51, 52, 130, 434, 540, 546
Bme18I	GGWCC	3 cut(s)	47, 612, 966
BmeT110I	CYCGRG	4 cut(s)	50, 470, 517, 724
BmgT120I	GGNCC	8 cut(s)	47, 54, 55, 542, 612, 721, 722, 966
BmiI	GGNNCC	7 cut(s)	49, 55, 56, 448, 476, 544, 723
BmrFI	CCNGG	6 cut(s)	51, 52, 130, 434, 540, 546
BmsI	GCATC	1 cut(s)	304
BpiI	GAAGAC	2 cut(s)	615, 657
BplI	GAGNNNNNCTC	6 cut(s)	124, 156, 547, 579, 718, 750
BpuEI	CTTGAG	2 cut(s)	311, 574
BpuMI	CCSGG	4 cut(s)	51, 52, 434, 546
BsaAI	YACGTR	2 cut(s)	257, 294
BsaI	GGTCTC	1 cut(s)	592
BsaJI	CCNNGG	5 cut(s)	50, 51, 415, 544, 581
BsaWI	WCCGGW	1 cut(s)	777
BsaXI	ACNNNNNCTCC	2 cut(s)	619, 649
Bsc4I	CCNNNNNNNGG	3 cut(s)	135, 545, 760
Bse118I	RCCGGY	2 cut(s)	279, 443
Bse3DI	GCAATG	2 cut(s)	336, 375
BseBI	CCWGG	2 cut(s)	130, 540
BseDI	CCNNGG	5 cut(s)	50, 51, 415, 544, 581
BseGI	GGATG	1 cut(s)	504
BseLI	CCNNNNNNNGG	3 cut(s)	135, 545, 760
BseMI	GCAATG	2 cut(s)	336, 375
BseMII	CTCAG	1 cut(s)	128
BseRI	GAGGAG	1 cut(s)	505
BseSI	GKGCMC	3 cut(s)	58, 477, 725
BseX3I	CGGCCG	1 cut(s)	281
BseXI	GCAGC	3 cut(s)	304, 328, 522
Bsh1236I	CGCG	2 cut(s)	188, 459
Bsh1285I	CGRYCG	1 cut(s)	284
BshFI	GGCC	5 cut(s)	56, 139, 283, 543, 723
BshNI	GGYRCC	2 cut(s)	446, 474
BsiEI	CGRYCG	1 cut(s)	284
BsiHKAI	GWGCWC	1 cut(s)	777
BsiHKCI	CYCGRG	4 cut(s)	50, 470, 517, 724
BsiSI	CCGG	8 cut(s)	51, 280, 433, 444, 450, 532, 546, 778
BslFI	GGGAC	2 cut(s)	33, 46
BslI	CCNNNNNNNGG	3 cut(s)	135, 545, 760
BsmAI	GTCTC	3 cut(s)	389, 493, 592
BsmBI	CGTCTC	1 cut(s)	389
BsmFI	GGGAC	2 cut(s)	33, 46
BsnI	GGCC	5 cut(s)	56, 139, 283, 543, 723
Bso31I	GGTCTC	1 cut(s)	592
BsoBI	CYCGRG	4 cut(s)	50, 470, 517, 724
Bsp120I	GGGCCC	2 cut(s)	54, 721
Bsp1286I	GDGCHC	5 cut(s)	58, 477, 725, 731, 777
Bsp143I	GATC	4 cut(s)	122, 204, 521, 841
BspACI	CCGC	2 cut(s)	284, 345
BspANI	GGCC	5 cut(s)	56, 139, 283, 543, 723
BspCNI	CTCAG	1 cut(s)	127
BspFNI	CGCG	2 cut(s)	188, 459
BspLI	GGNNCC	7 cut(s)	49, 55, 56, 448, 476, 544, 723
BspPI	GGATC	1 cut(s)	199
BspT107I	GGYRCC	2 cut(s)	446, 474
BspTI	CTTAAG	1 cut(s)	146
BspTNI	GGTCTC	1 cut(s)	592
BsrDI	GCAATG	2 cut(s)	336, 375
BsrFI	RCCGGY	2 cut(s)	279, 443
BssAI	RCCGGY	2 cut(s)	279, 443
BssECI	CCNNGG	5 cut(s)	50, 51, 415, 544, 581
BssMI	GATC	4 cut(s)	122, 204, 521, 841
BssNAI	GTATAC	1 cut(s)	818
BssT1I	CCWWGG	1 cut(s)	581
Bst1107I	GTATAC	1 cut(s)	818
Bst2UI	CCWGG	2 cut(s)	130, 540
Bst4CI	ACNGT	2 cut(s)	822, 893
Bst6I	CTCTTC	3 cut(s)	147, 743, 763
BstAFI	CTTAAG	1 cut(s)	146
BstBAI	YACGTR	2 cut(s)	257, 294
BstC8I	GCNNGC	1 cut(s)	600
BstDEI	CTNAG	3 cut(s)	114, 161, 898
BstF5I	GGATG	1 cut(s)	504
BstFNI	CGCG	2 cut(s)	188, 459
BstHHI	GCGC	3 cut(s)	190, 425, 459
BstKTI	GATC	4 cut(s)	125, 207, 524, 844
BstMAI	GTCTC	3 cut(s)	389, 493, 592
BstMBI	GATC	4 cut(s)	122, 204, 521, 841
BstMCI	CGRYCG	1 cut(s)	284
BstMWI	GCNNNNNNNGC	4 cut(s)	341, 463, 472, 549
BstNI	CCWGG	2 cut(s)	130, 540
BstSCI	CCNGG	6 cut(s)	49, 50, 128, 432, 538, 544
BstSLI	GKGCMC	3 cut(s)	58, 477, 725
BstUI	CGCG	2 cut(s)	188, 459
BstV1I	GCAGC	3 cut(s)	304, 328, 522
BstV2I	GAAGAC	2 cut(s)	615, 657
BstX2I	RGATCY	2 cut(s)	122, 204
BstYI	RGATCY	2 cut(s)	122, 204
BstZ17I	GTATAC	1 cut(s)	818
BstZI	CGGCCG	1 cut(s)	281
BsuRI	GGCC	5 cut(s)	56, 139, 283, 543, 723
BtsCI	GGATG	1 cut(s)	504
Cac8I	GCNNGC	1 cut(s)	600
CfoI	GCGC	3 cut(s)	190, 425, 459
Cfr10I	RCCGGY	2 cut(s)	279, 443
Cfr13I	GGNCC	8 cut(s)	47, 54, 55, 542, 612, 721, 722, 966
Cfr9I	CCCGGG	1 cut(s)	50
Csp6I	GTAC	1 cut(s)	872
CviAII	CATG	1 cut(s)	956
CviQI	GTAC	1 cut(s)	872
DdeI	CTNAG	3 cut(s)	114, 161, 898
DpnI	GATC	4 cut(s)	124, 206, 523, 843
DpnII	GATC	4 cut(s)	122, 204, 521, 841
EaeI	YGGCCR	1 cut(s)	281
EagI	CGGCCG	1 cut(s)	281
Eam1104I	CTCTTC	3 cut(s)	147, 743, 763
EarI	CTCTTC	3 cut(s)	147, 743, 763
EclXI	CGGCCG	1 cut(s)	281
Eco130I	CCWWGG	1 cut(s)	581
Eco24I	GRGCYC	3 cut(s)	58, 725, 731
Eco31I	GGTCTC	1 cut(s)	592
Eco47I	GGWCC	3 cut(s)	47, 612, 966
Eco52I	CGGCCG	1 cut(s)	281
Eco88I	CYCGRG	4 cut(s)	50, 470, 517, 724
EcoO109I	RGGNCCY	3 cut(s)	54, 542, 721
EcoRII	CCWGG	2 cut(s)	128, 538
EcoT14I	CCWWGG	1 cut(s)	581
EcoT38I	GRGCYC	3 cut(s)	58, 725, 731
ErhI	CCWWGG	1 cut(s)	581
Esp3I	CGTCTC	1 cut(s)	389
FaeI	CATG	1 cut(s)	959
FaqI	GGGAC	2 cut(s)	33, 46
FatI	CATG	1 cut(s)	955
FauNDI	CATATG	1 cut(s)	838
FblI	GTMKAC	1 cut(s)	817
Fnu4HI	GCNGC	5 cut(s)	284, 318, 342, 345, 536
FokI	GGATG	1 cut(s)	491
FriOI	GRGCYC	3 cut(s)	58, 725, 731
Fsp4HI	GCNGC	5 cut(s)	284, 318, 342, 345, 536
FspBI	CTAG	3 cut(s)	321, 641, 905
GlaI	GCGC	3 cut(s)	189, 424, 458
GluI	GCNGC	5 cut(s)	284, 318, 342, 345, 536
HaeIII	GGCC	5 cut(s)	56, 139, 283, 543, 723
HapII	CCGG	8 cut(s)	51, 280, 433, 444, 450, 532, 546, 778
HhaI	GCGC	3 cut(s)	190, 425, 459
Hin1II	CATG	1 cut(s)	959
Hin6I	GCGC	3 cut(s)	188, 423, 457
HinP1I	GCGC	3 cut(s)	188, 423, 457
HinfI	GANTC	3 cut(s)	167, 653, 701
HpaII	CCGG	8 cut(s)	51, 280, 433, 444, 450, 532, 546, 778
HphI	GGTGA	1 cut(s)	898
Hpy166II	GTNNAC	2 cut(s)	818, 889
Hpy188I	TCNGA	5 cut(s)	117, 198, 567, 685, 706
Hpy188III	TCNNGA	2 cut(s)	519, 749
Hpy8I	GTNNAC	2 cut(s)	818, 889
Hpy99I	CGWCG	3 cut(s)	182, 368, 497
HpyAV	CCTTC	1 cut(s)	800
HpyCH4III	ACNGT	2 cut(s)	822, 893
HpyCH4IV	ACGT	2 cut(s)	256, 293
HpyF10VI	GCNNNNNNNGC	4 cut(s)	341, 463, 472, 549
HpyF3I	CTNAG	3 cut(s)	114, 161, 898
HpySE526I	ACGT	2 cut(s)	256, 293
Hsp92II	CATG	1 cut(s)	959
HspAI	GCGC	3 cut(s)	188, 423, 457
Kzo9I	GATC	4 cut(s)	122, 204, 521, 841
LmnI	GCTCC	3 cut(s)	198, 568, 780
Lsp1109I	GCAGC	3 cut(s)	304, 328, 522
LweI	GCATC	1 cut(s)	304
MaeI	CTAG	3 cut(s)	321, 641, 905
MaeII	ACGT	2 cut(s)	256, 293
MaeIII	GTNAC	2 cut(s)	289, 410
MalI	GATC	4 cut(s)	124, 206, 523, 843
MboI	GATC	4 cut(s)	122, 204, 521, 841
MboII	GAAGA	7 cut(s)	50, 134, 615, 662, 730, 733, 750
MflI	RGATCY	2 cut(s)	122, 204
MhlI	GDGCHC	5 cut(s)	58, 477, 725, 731, 777
MlyI	GAGTC	1 cut(s)	647
MmeI	TCCRAC	1 cut(s)	656
MseI	TTAA	3 cut(s)	84, 147, 882
MslI	CAYNNNNRTG	1 cut(s)	213
MspCI	CTTAAG	1 cut(s)	146
MspI	CCGG	8 cut(s)	51, 280, 433, 444, 450, 532, 546, 778
MspR9I	CCNGG	6 cut(s)	51, 52, 130, 434, 540, 546
MvaI	CCWGG	2 cut(s)	130, 540
MvnI	CGCG	2 cut(s)	188, 459
MwoI	GCNNNNNNNGC	4 cut(s)	341, 463, 472, 549
NciI	CCSGG	4 cut(s)	51, 52, 434, 546
NdeI	CATATG	1 cut(s)	838
NdeII	GATC	4 cut(s)	122, 204, 521, 841
NlaIII	CATG	1 cut(s)	959
NlaIV	GGNNCC	7 cut(s)	49, 55, 56, 448, 476, 544, 723
NmeAIII	GCCGAG	1 cut(s)	574
NmuCI	GTSAC	1 cut(s)	289
PaeR7I	CTCGAG	1 cut(s)	517
PfeI	GAWTC	2 cut(s)	167, 701
PflMI	CCANNNNNTGG	1 cut(s)	135
PfoI	TCCNGGA	1 cut(s)	432
PkrI	GCNGC	5 cut(s)	285, 319, 343, 346, 537
PleI	GAGTC	1 cut(s)	647
PpsI	GAGTC	1 cut(s)	647
Ppu21I	YACGTR	2 cut(s)	257, 294
Psp6I	CCWGG	2 cut(s)	128, 538
PspGI	CCWGG	2 cut(s)	128, 538
PspN4I	GGNNCC	7 cut(s)	49, 55, 56, 448, 476, 544, 723
PspOMI	GGGCCC	2 cut(s)	54, 721
PspPI	GGNCC	8 cut(s)	47, 54, 55, 542, 612, 721, 722, 966
PsuI	RGATCY	2 cut(s)	122, 204
RsaI	GTAC	1 cut(s)	873
RsaNI	GTAC	1 cut(s)	872
RseI	CAYNNNNRTG	1 cut(s)	213
SaqAI	TTAA	3 cut(s)	84, 147, 882
SatI	GCNGC	5 cut(s)	284, 318, 342, 345, 536
Sau3AI	GATC	4 cut(s)	122, 204, 521, 841
Sau96I	GGNCC	8 cut(s)	47, 54, 55, 542, 612, 721, 722, 966
SchI	GAGTC	1 cut(s)	647
ScrFI	CCNGG	6 cut(s)	51, 52, 130, 434, 540, 546
SduI	GDGCHC	5 cut(s)	58, 477, 725, 731, 777
SfaNI	GCATC	1 cut(s)	304
Sfr274I	CTCGAG	1 cut(s)	517
SinI	GGWCC	3 cut(s)	47, 612, 966
SlaI	CTCGAG	1 cut(s)	517
SmaI	CCCGGG	1 cut(s)	52
SmiMI	CAYNNNNRTG	1 cut(s)	213
SmlI	CTYRAG	4 cut(s)	146, 326, 517, 553
SmoI	CTYRAG	4 cut(s)	146, 326, 517, 553
SpeI	ACTAGT	2 cut(s)	640, 904
SsiI	CCGC	2 cut(s)	284, 345
SspMI	CTAG	3 cut(s)	321, 641, 905
StyD4I	CCNGG	6 cut(s)	49, 50, 128, 432, 538, 544
StyI	CCWWGG	1 cut(s)	581
TaaI	ACNGT	2 cut(s)	822, 893
TaiI	ACGT	2 cut(s)	259, 296
TaqI	TCGA	4 cut(s)	268, 518, 750, 855
TaqII	GACCGA	2 cut(s)	35, 361
TatI	WGTACW	1 cut(s)	871
TauI	GCSGC	2 cut(s)	286, 347
TfiI	GAWTC	2 cut(s)	167, 701
Tru1I	TTAA	3 cut(s)	84, 147, 882
Tru9I	TTAA	3 cut(s)	84, 147, 882
TseFI	GTSAC	1 cut(s)	289
TseI	GCWGC	3 cut(s)	317, 341, 535
Tsp45I	GTSAC	1 cut(s)	289
TspDTI	ATGAA	2 cut(s)	17, 182
TspGWI	ACGGA	3 cut(s)	481, 635, 930
TspMI	CCCGGG	1 cut(s)	50
Van91I	CCANNNNNTGG	1 cut(s)	135
Vha464I	CTTAAG	1 cut(s)	146
VpaK11BI	GGWCC	3 cut(s)	47, 612, 966
XapI	RAATTY	6 cut(s)	99, 220, 301, 677, 688, 708
XhoI	CTCGAG	1 cut(s)	517
XmaI	CCCGGG	1 cut(s)	50
XmiI	GTMKAC	1 cut(s)	817
XspI	CTAG	3 cut(s)	321, 641, 905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.