Rw0G014230

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00636
OG0000084
Physical Location & Seq
Forward (+)
9714 .. 11733
2020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G014230.1

Sequence Viewer

Length: 1467 bp
ATGGATGATCAATCTCAAAGAGGAATAATATCTACTGTACGCTTCTCTCTCTTTTTCTCTGCTGAGGGCGAGAGTAAAGATTGGATAAATGAGCTTCCGGATTGCATTCTGTCATCCATACTTTCATTGTTAACAATGAAAGATGCAGCGGTGACTAGCATTGTATCTCGCCAGTGGAGGAACCTTTGGAAGACAAGGCCTCCCAATCTTGAATTAGACATTGTAAATATTTTTGGGTCCGTGTATGCTCCTCTCATTGAACCATATCGGTCCATCTTTAGTGTTACATCTTGTAGTCTTCAATTCGACAGACAGTGCTATATAAAACGAGTGAATGAAGTTTTGGAGCTCTACTCTGGCAACAAGCTAGACTCATTCAAAGTGGCATTCTTTTTTAATCGAGAATTTACTGAAGATCTTGATAAATGGGTTCGTTTTGCAATTACAAAGGGAGCTCAAAAGCTGGATCTTCAATTATTAAGAGGCGCTTTGGATCCACATGATAATTTTTATGTTTTTCCTCACTGGATCCTTGCAGATTTGAACGCATCAACCTTAAAGCATTTGTCGTTGCATCGATGTGTTCTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAGAAACTCTTTCTCTGAATGACATTGTAGTTGATCCAGAATTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGGTTCACCTTGAACACATGTGACGTGCGCTCAAATCTGATTATTGGTCCATCCCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTTTACTCCCTGGAATATGATGGATATAATACGGAGATTTCTTTCATGAGAACTCCACGGCTAGCAAGATGTTTTTTTAAGGGATGGTCTATAGGTCCGGTACCTCATGTGCTAACCCAACTCCCCCTGTGTTCTGAGCTTGCGACTCTTCATCTGCAGATCAGAAATAATTTCGAACATATACCCCAAACTTTTCCAACATTGAAAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCACCTTTGGAAGAACTTATAATAACAACACGAGCTCCAGACTATCACGGAGAGATGAGGAGTATGTGGTTCGAGATAGAGTTGGCCATTTGCCTTCTTAAAATTGCTACAAAGCTTGAGGTAATGGTGATTGATCCACTTGGATCATACTATGACGGTGATGGAACGTGGGTCAAAATGACCTGTTATTATCAGGATGGGAATGAAGATGAGAACCCAGAGGAATATGATGACACAGGAGATGAAAATGTGGACAATGTGCCTTATGAACTTTTACGTTGGCAAAAAAGAGGCAGGGCAGCAGTCCAAGAAAGGCTGAAAGATGTAAAGACTGATGCTCAAGTCATCATCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

488

Amino Acids

56.31

Weight (kDa)

5.18

Isoelectric Point (pI)

36.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 68 1.5e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 115 - 384 7e-34 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 140 - 296 1.6e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1130
AarI CACCTGC 1 cut(s) 771
Acc36I ACCTGC 1 cut(s) 771
Acc65I GGTACC 1 cut(s) 925
AccB1I GGYRCC 1 cut(s) 925
AccIII TCCGGA 1 cut(s) 97
AciI CCGC 1 cut(s) 149
AclWI GGATC 9 cut(s) 474, 488, 501, 523, 536, 650, 1062, 1238, 1261
AcoI YGGCCR 1 cut(s) 1194
AcsI RAATTY 2 cut(s) 404, 662
AcuI CTGAAG 1 cut(s) 432
AcvI CACGTG 1 cut(s) 786
AfaI GTAC 2 cut(s) 39, 927
AflIII ACRYGT 2 cut(s) 719, 785
AgsI TTSAA 9 cut(s) 212, 260, 302, 379, 473, 544, 715, 1030, 1076
AjiI CACGTC 2 cut(s) 674, 727
AjnI CCWGG 1 cut(s) 834
AjuI GAANNNNNNNTTGG 2 cut(s) 326, 358
AluBI AGCT 9 cut(s) 94, 349, 367, 455, 463, 622, 964, 1145, 1225
AluI AGCT 9 cut(s) 94, 349, 367, 455, 463, 622, 964, 1145, 1225
Alw21I GWGCWC 4 cut(s) 351, 457, 783, 1147
AlwI GGATC 9 cut(s) 474, 488, 501, 523, 536, 650, 1062, 1238, 1261
Aor13HI TCCGGA 1 cut(s) 97
AoxI GGCC 2 cut(s) 197, 1194
ApeKI GCWGC 3 cut(s) 146, 1106, 1409
ApoI RAATTY 2 cut(s) 404, 662
Asp718I GGTACC 1 cut(s) 925
AspLEI GCGC 2 cut(s) 488, 732
AspS9I GGNCC 4 cut(s) 237, 270, 749, 920
AsuHPI GGTGA 5 cut(s) 163, 700, 752, 1249, 1280
AsuII TTCGAA 1 cut(s) 999
AsuNHI GCTAGC 1 cut(s) 886
AvaII GGWCC 4 cut(s) 237, 270, 749, 920
BalI TGGCCA 1 cut(s) 1196
BamHI GGATCC 2 cut(s) 493, 528
BanI GGYRCC 1 cut(s) 925
BanII GRGCYC 3 cut(s) 351, 457, 1147
BauI CACGAG 1 cut(s) 1140
BbrPI CACGTG 1 cut(s) 786
BbsI GAAGAC 2 cut(s) 197, 290
Bbv12I GWGCWC 4 cut(s) 351, 457, 783, 1147
BbvCI CCTCAGC 1 cut(s) 63
BbvI GCAGC 3 cut(s) 158, 1093, 1421
BccI CCATC 6 cut(s) 281, 760, 839, 903, 1265, 1301
BceAI ACGGC 1 cut(s) 899
BciT130I CCWGG 1 cut(s) 836
BclI TGATCA 1 cut(s) 7
BfaI CTAG 4 cut(s) 156, 368, 623, 887
BfmI CTRYAG 2 cut(s) 915, 980
BfoI RGCGCY 1 cut(s) 489
BfuAI ACCTGC 1 cut(s) 771
BglII AGATCT 1 cut(s) 415
BisI GCNGC 3 cut(s) 147, 1107, 1410
BlsI GCNGC 3 cut(s) 148, 1108, 1411
Bme1390I CCNGG 1 cut(s) 836
Bme18I GGWCC 4 cut(s) 237, 270, 749, 920
BmgBI CACGTC 2 cut(s) 674, 727
BmgT120I GGNCC 4 cut(s) 237, 270, 749, 920
BmiI GGNNCC 5 cut(s) 182, 238, 495, 530, 927
BmrFI CCNGG 1 cut(s) 836
BmsI GCATC 5 cut(s) 133, 557, 583, 805, 1435
BmtI GCTAGC 1 cut(s) 890
BpiI GAAGAC 2 cut(s) 197, 290
BplI GAGNNNNNCTC 2 cut(s) 338, 370
BpmI CTGGAG 1 cut(s) 1131
Bpu10I CCTNAGC 1 cut(s) 63
Bpu14I TTCGAA 1 cut(s) 999
BpuEI CTTGAG 3 cut(s) 1085, 1247, 1434
Bsa29I ATCGAT 1 cut(s) 577
BsaAI YACGTR 1 cut(s) 786
BsaJI CCNNGG 2 cut(s) 834, 881
BsaWI WCCGGW 2 cut(s) 97, 922
BsaXI ACNNNNNCTCC 4 cut(s) 184, 214, 1129, 1159
Bse1I ACTGG 2 cut(s) 172, 530
BseAI TCCGGA 1 cut(s) 97
BseBI CCWGG 1 cut(s) 836
BseCI ATCGAT 1 cut(s) 577
BseDI CCNNGG 2 cut(s) 834, 881
BseGI GGATG 6 cut(s) 10, 113, 752, 914, 1312, 1458
BseMII CTCAG 2 cut(s) 54, 951
BseNI ACTGG 2 cut(s) 172, 530
BseRI GAGGAG 3 cut(s) 240, 1049, 1183
BseXI GCAGC 3 cut(s) 158, 1093, 1421
BsgI GTGCAG 1 cut(s) 1092
BshFI GGCC 2 cut(s) 199, 1196
BshNI GGYRCC 1 cut(s) 925
BshVI ATCGAT 1 cut(s) 577
BsiHKAI GWGCWC 4 cut(s) 351, 457, 783, 1147
BsiSI CCGG 2 cut(s) 98, 923
BsmI GAATGC 2 cut(s) 105, 386
BsnI GGCC 2 cut(s) 199, 1196
Bsp119I TTCGAA 1 cut(s) 999
Bsp1286I GDGCHC 4 cut(s) 351, 457, 783, 1147
Bsp13I TCCGGA 1 cut(s) 97
BspACI CCGC 1 cut(s) 149
BspANI GGCC 2 cut(s) 199, 1196
BspCNI CTCAG 2 cut(s) 55, 952
BspDI ATCGAT 1 cut(s) 577
BspEI TCCGGA 1 cut(s) 97
BspHI TCATGA 1 cut(s) 870
BspLI GGNNCC 5 cut(s) 182, 238, 495, 530, 927
BspMAI CTGCAG 1 cut(s) 984
BspMI ACCTGC 1 cut(s) 771
BspOI GCTAGC 1 cut(s) 890
BspPI GGATC 9 cut(s) 474, 488, 501, 523, 536, 650, 1062, 1238, 1261
BspT104I TTCGAA 1 cut(s) 999
BspT107I GGYRCC 1 cut(s) 925
BsrI ACTGG 2 cut(s) 172, 530
BssECI CCNNGG 2 cut(s) 834, 881
BssSI CACGAG 1 cut(s) 1140
Bst2BI CACGAG 1 cut(s) 1140
Bst2UI CCWGG 1 cut(s) 836
Bst4CI ACNGT 3 cut(s) 37, 315, 1268
Bst6I CTCTTC 1 cut(s) 978
BstBAI YACGTR 1 cut(s) 786
BstBI TTCGAA 1 cut(s) 999
BstC8I GCNNGC 2 cut(s) 888, 966
BstDEI CTNAG 2 cut(s) 63, 960
BstDSI CCRYGG 1 cut(s) 881
BstF5I GGATG 6 cut(s) 10, 113, 752, 914, 1312, 1458
BstH2I RGCGCY 1 cut(s) 489
BstHHI GCGC 2 cut(s) 488, 732
BstNI CCWGG 1 cut(s) 836
BstNSI RCATGY 1 cut(s) 723
BstSCI CCNGG 1 cut(s) 834
BstSFI CTRYAG 2 cut(s) 915, 980
BstV1I GCAGC 3 cut(s) 158, 1093, 1421
BstV2I GAAGAC 2 cut(s) 197, 290
BstX2I RGATCY 5 cut(s) 415, 466, 493, 528, 1054
BstYI RGATCY 5 cut(s) 415, 466, 493, 528, 1054
Bsu15I ATCGAT 1 cut(s) 577
BsuRI GGCC 2 cut(s) 199, 1196
BsuTUI ATCGAT 1 cut(s) 577
BtgI CCRYGG 1 cut(s) 881
BtrI CACGTC 2 cut(s) 674, 727
BtsCI GGATG 6 cut(s) 10, 113, 752, 914, 1312, 1458
BtsIMutI CAGTG 3 cut(s) 179, 320, 523
BveI ACCTGC 1 cut(s) 771
Cac8I GCNNGC 2 cut(s) 888, 966
CciI TCATGA 1 cut(s) 870
CfoI GCGC 2 cut(s) 488, 732
Cfr13I GGNCC 4 cut(s) 237, 270, 749, 920
ClaI ATCGAT 1 cut(s) 577
Csp6I GTAC 2 cut(s) 38, 926
CviAII CATG 6 cut(s) 500, 720, 767, 871, 932, 1063
CviQI GTAC 2 cut(s) 38, 926
DdeI CTNAG 2 cut(s) 63, 960
EaeI YGGCCR 1 cut(s) 1194
Eam1104I CTCTTC 1 cut(s) 978
EarI CTCTTC 1 cut(s) 978
Ecl136II GAGCTC 3 cut(s) 349, 455, 1145
Eco147I AGGCCT 1 cut(s) 199
Eco24I GRGCYC 3 cut(s) 351, 457, 1147
Eco47I GGWCC 4 cut(s) 237, 270, 749, 920
Eco53kI GAGCTC 3 cut(s) 349, 455, 1145
Eco57I CTGAAG 1 cut(s) 432
Eco72I CACGTG 1 cut(s) 786
EcoICRI GAGCTC 3 cut(s) 349, 455, 1145
EcoRII CCWGG 1 cut(s) 834
EcoT38I GRGCYC 3 cut(s) 351, 457, 1147
FaeI CATG 6 cut(s) 503, 723, 770, 874, 935, 1066
FalI AAGNNNNNCTT 2 cut(s) 472, 504
FatI CATG 6 cut(s) 499, 719, 766, 870, 931, 1062
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 3 cut(s) 147, 1107, 1410
FokI GGATG 6 cut(s) 17, 100, 739, 921, 1319, 1445
FriOI GRGCYC 3 cut(s) 351, 457, 1147
Fsp4HI GCNGC 3 cut(s) 147, 1107, 1410
FspBI CTAG 4 cut(s) 156, 368, 623, 887
GlaI GCGC 2 cut(s) 487, 731
GluI GCNGC 3 cut(s) 147, 1107, 1410
GsuI CTGGAG 1 cut(s) 1131
HaeII RGCGCY 1 cut(s) 489
HaeIII GGCC 2 cut(s) 199, 1196
HapII CCGG 2 cut(s) 98, 923
HhaI GCGC 2 cut(s) 488, 732
Hin1II CATG 6 cut(s) 503, 723, 770, 874, 935, 1066
Hin6I GCGC 2 cut(s) 486, 730
HinP1I GCGC 2 cut(s) 486, 730
HincII GTYRAC 1 cut(s) 132
HindII GTYRAC 1 cut(s) 132
HindIII AAGCTT 1 cut(s) 1223
HinfI GANTC 3 cut(s) 371, 612, 970
HpaI GTTAAC 1 cut(s) 132
HpaII CCGG 2 cut(s) 98, 923
HphI GGTGA 5 cut(s) 163, 700, 752, 1249, 1280
Hpy166II GTNNAC 3 cut(s) 132, 708, 1363
Hpy188I TCNGA 5 cut(s) 639, 741, 774, 961, 989
Hpy8I GTNNAC 3 cut(s) 132, 708, 1363
HpyAV CCTTC 2 cut(s) 767, 1214
HpyCH4III ACNGT 3 cut(s) 37, 315, 1268
HpyCH4IV ACGT 5 cut(s) 673, 726, 785, 1277, 1387
HpyCH4V TGCA 9 cut(s) 105, 146, 440, 536, 574, 766, 818, 982, 1109
HpyF3I CTNAG 2 cut(s) 63, 960
HpySE526I ACGT 5 cut(s) 673, 726, 785, 1277, 1387
Hsp92II CATG 6 cut(s) 503, 723, 770, 874, 935, 1066
HspAI GCGC 2 cut(s) 486, 730
Kpn2I TCCGGA 1 cut(s) 97
KpnI GGTACC 1 cut(s) 929
Ksp22I TGATCA 1 cut(s) 7
KspAI GTTAAC 1 cut(s) 132
LmnI GCTCC 4 cut(s) 253, 346, 452, 1150
Lsp1109I GCAGC 3 cut(s) 158, 1093, 1421
LweI GCATC 5 cut(s) 133, 557, 583, 805, 1435
MaeI CTAG 4 cut(s) 156, 368, 623, 887
MaeII ACGT 5 cut(s) 673, 726, 785, 1277, 1387
MaeIII GTNAC 4 cut(s) 151, 283, 722, 788
MboII GAAGA 8 cut(s) 202, 290, 425, 461, 813, 965, 1133, 1328
MflI RGATCY 5 cut(s) 415, 466, 493, 528, 1054
MhlI GDGCHC 4 cut(s) 351, 457, 783, 1147
MlsI TGGCCA 1 cut(s) 1196
MluCI AATT 9 cut(s) 212, 302, 404, 441, 473, 505, 662, 994, 1212
MluNI TGGCCA 1 cut(s) 1196
MlyI GAGTC 2 cut(s) 365, 964
MmeI TCCRAC 2 cut(s) 1032, 1046
Mox20I TGGCCA 1 cut(s) 1196
MroI TCCGGA 1 cut(s) 97
MscI TGGCCA 1 cut(s) 1196
MseI TTAA 6 cut(s) 131, 396, 479, 557, 903, 1209
MslI CAYNNNNRTG 2 cut(s) 579, 765
Msp20I TGGCCA 1 cut(s) 1196
MspA1I CMGCKG 1 cut(s) 149
MspI CCGG 2 cut(s) 98, 923
MspR9I CCNGG 1 cut(s) 836
Mva1269I GAATGC 2 cut(s) 105, 386
MvaI CCWGG 1 cut(s) 836
NheI GCTAGC 1 cut(s) 886
NlaIII CATG 6 cut(s) 503, 723, 770, 874, 935, 1066
NlaIV GGNNCC 5 cut(s) 182, 238, 495, 530, 927
NmuCI GTSAC 2 cut(s) 151, 722
NspI RCATGY 1 cut(s) 723
NspV TTCGAA 1 cut(s) 999
PagI TCATGA 1 cut(s) 870
PaqCI CACCTGC 1 cut(s) 771
PceI AGGCCT 1 cut(s) 199
PciI ACATGT 1 cut(s) 719
PctI GAATGC 2 cut(s) 105, 386
PfeI GAWTC 1 cut(s) 612
PkrI GCNGC 3 cut(s) 148, 1108, 1411
PleI GAGTC 2 cut(s) 365, 964
PmaCI CACGTG 1 cut(s) 786
PmlI CACGTG 1 cut(s) 786
PpsI GAGTC 2 cut(s) 365, 964
Ppu21I YACGTR 1 cut(s) 786
PscI ACATGT 1 cut(s) 719
PsiI TTATAA 1 cut(s) 1130
Psp124BI GAGCTC 3 cut(s) 351, 457, 1147
Psp6I CCWGG 1 cut(s) 834
PspCI CACGTG 1 cut(s) 786
PspGI CCWGG 1 cut(s) 834
PspN4I GGNNCC 5 cut(s) 182, 238, 495, 530, 927
PspPI GGNCC 4 cut(s) 237, 270, 749, 920
PstI CTGCAG 1 cut(s) 984
PsuI RGATCY 5 cut(s) 415, 466, 493, 528, 1054
RsaI GTAC 2 cut(s) 39, 927
RsaNI GTAC 2 cut(s) 38, 926
RseI CAYNNNNRTG 2 cut(s) 579, 765
SacI GAGCTC 3 cut(s) 351, 457, 1147
SaqAI TTAA 6 cut(s) 131, 396, 479, 557, 903, 1209
SatI GCNGC 3 cut(s) 147, 1107, 1410
Sau96I GGNCC 4 cut(s) 237, 270, 749, 920
SchI GAGTC 2 cut(s) 365, 964
ScrFI CCNGG 1 cut(s) 836
SduI GDGCHC 4 cut(s) 351, 457, 783, 1147
SfaNI GCATC 5 cut(s) 133, 557, 583, 805, 1435
SfcI CTRYAG 2 cut(s) 915, 980
SfuI TTCGAA 1 cut(s) 999
SinI GGWCC 4 cut(s) 237, 270, 749, 920
SmiMI CAYNNNNRTG 2 cut(s) 579, 765
SmlI CTYRAG 3 cut(s) 1100, 1226, 1449
SmoI CTYRAG 3 cut(s) 1100, 1226, 1449
Sse9I AATT 9 cut(s) 212, 302, 404, 441, 473, 505, 662, 994, 1212
SseBI AGGCCT 1 cut(s) 199
SsiI CCGC 1 cut(s) 149
SspI AATATT 2 cut(s) 229, 1096
SspMI CTAG 4 cut(s) 156, 368, 623, 887
SstI GAGCTC 3 cut(s) 351, 457, 1147
StuI AGGCCT 1 cut(s) 199
StyD4I CCNGG 1 cut(s) 834
TaaI ACNGT 3 cut(s) 37, 315, 1268
TaiI ACGT 5 cut(s) 676, 729, 788, 1280, 1390
TaqI TCGA 6 cut(s) 306, 400, 577, 699, 999, 1182
TaqII GACCGA 1 cut(s) 258
TasI AATT 9 cut(s) 212, 302, 404, 441, 473, 505, 662, 994, 1212
TfiI GAWTC 1 cut(s) 612
Tru1I TTAA 6 cut(s) 131, 396, 479, 557, 903, 1209
Tru9I TTAA 6 cut(s) 131, 396, 479, 557, 903, 1209
TscAI CASTG 3 cut(s) 179, 320, 530
TseFI GTSAC 2 cut(s) 151, 722
TseI GCWGC 3 cut(s) 146, 1106, 1409
Tsp45I GTSAC 2 cut(s) 151, 722
TspDTI ATGAA 9 cut(s) 114, 152, 351, 604, 859, 965, 1329, 1368, 1392
TspGWI ACGGA 3 cut(s) 229, 872, 1173
TspRI CASTG 3 cut(s) 179, 320, 530
VpaK11BI GGWCC 4 cut(s) 237, 270, 749, 920
XapI RAATTY 2 cut(s) 404, 662
XceI RCATGY 1 cut(s) 723
XspI CTAG 4 cut(s) 156, 368, 623, 887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.