Rmu_sc0000148.1_g000068

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000148.1
OG0000084
Physical Location & Seq
Forward (+)
317629 .. 320682
3054 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000148.1_g000068.1.cds

Sequence Viewer

Length: 1572 bp
atgattcattcaccttcatataatttgattctactggattgcaaggtagacaagattcaaatgtggttcagctttgcatgtgaaggccaattgccaattgataaccctggaatattagagatggcgcacggcgagagtgagaacacgattaataatttgccagattgttggaggtactcctggaagcatccaatactttcaaggccagatcttgaatttgacgttccaaacattttcggaaccaaattatatcgccagctctttaatgaatttggagataagtatattcataggtttggtcagtatgaaagagaagcctttgtaggacgtgtgaataaatttttgaagctttaccatggtaaggaggttgactctttcaaagtgtcattccctttagatggagtttatgctgccgacctagatgaatggattcattttgcaattagaaagggagctcaagtgcttgatcttcaattattatgttgcggccttctagaaacaaacaatttttatgtgttccctcattggtttctcccaggatctctaaagcatttgtcattgctaaggtgtgttctaggacctcctcttgattttggcacattcaatgagttaagaactctttctctgaataatgttatcatagatgaaaaatttgtggcacatctatcctctgtttgtttgtgccttaaaagattgaccttaaaggagtgcagtgtgggttcgtgtcttattcttggggctccattactttgtttgaccgagttgaaagtgctccaatgtattgatttagccaaactggagattcactgcaaaaatattacctccttggaatatgaaggacttgcagagacttattacatgaaaacaaaatggttggcaagaattttttggtctgataggtctttcaatgattcatcacttcatgcactaacccaacttgcctcgtgtcctaggctagaatgtcttcatctgcggctttggttttcgggggaagaaatacctgaaaacatacaaacatttacaaacctcaagctgcacttggatctgttttcaccgcacttgaatgtttgtggtgttctgattataatcaaggctgcacctatgttggaagaatttgtattaacggtacgggcatctattcacaacgaggtgagaagtatcaggaggaagatgagcattcttgctagattctcacatctttgtttgaggaaagttaagattcatggtttccaatgtagatggtacgaaattgagttggccatttgcattctgaaaattcctaaaaagatggagataatggtaatcgatcctattggaaaatactatgccggtggtggtgaatggaaggacatgaatgattcaagatattcgtatgaagaggaggctgttgttcaggtcgaagaggccgtgggtgaggctagggaggacagtgaggctgtggaggtggaggagaaaaaggctgaggctgtggatgagacgggggacaaggatggttgggaagagagaggtagggcatttgtccaaaaaaatttacgtaaggtaatgactgatgctcaagttatagttctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

523

Amino Acids

60.24

Weight (kDa)

5.91

Isoelectric Point (pI)

42.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1085
AccI GTMKAC 1 cut(s) 48
AciI CCGC 3 cut(s) 486, 973, 1055
AclWI GGATC 3 cut(s) 547, 1050, 1301
AcoI YGGCCR 1 cut(s) 1257
AcsI RAATTY 8 cut(s) 215, 269, 338, 650, 882, 1112, 1275, 1528
AfaI GTAC 3 cut(s) 176, 1128, 1244
AfiI CCNNNNNNNGG 2 cut(s) 361, 398
AflIII ACRYGT 1 cut(s) 328
AjiI CACGTC 1 cut(s) 329
AjnI CCWGG 3 cut(s) 106, 179, 535
AluBI AGCT 5 cut(s) 72, 259, 349, 455, 1033
AluI AGCT 5 cut(s) 72, 259, 349, 455, 1033
Alw21I GWGCWC 2 cut(s) 457, 774
Alw26I GTCTC 2 cut(s) 842, 1469
AlwI GGATC 3 cut(s) 547, 1050, 1301
AoxI GGCC 5 cut(s) 85, 203, 487, 1257, 1404
ApeKI GCWGC 3 cut(s) 410, 1033, 1094
ApoI RAATTY 8 cut(s) 215, 269, 338, 650, 882, 1112, 1275, 1528
AseI ATTAAT 1 cut(s) 150
Asp700I GAANNNNTTC 3 cut(s) 429, 619, 963
AspA2I CCTAGG 1 cut(s) 950
AspLEI GCGC 1 cut(s) 127
AspS9I GGNCC 1 cut(s) 578
AsuHPI GGTGA 5 cut(s) 3, 1044, 1162, 1349, 1424
AvaII GGWCC 1 cut(s) 578
AvrII CCTAGG 1 cut(s) 950
BalI TGGCCA 1 cut(s) 1259
BanII GRGCYC 2 cut(s) 457, 742
BauI CACGAG 1 cut(s) 943
BbsI GAAGAC 1 cut(s) 956
Bbv12I GWGCWC 2 cut(s) 457, 774
BbvCI CCTCAGC 1 cut(s) 1461
BbvI GCAGC 3 cut(s) 397, 1020, 1081
BccI CCATC 5 cut(s) 115, 392, 1233, 1282, 1484
BceAI ACGGC 2 cut(s) 145, 1391
BciT130I CCWGG 3 cut(s) 108, 181, 537
BcoDI GTCTC 2 cut(s) 842, 1469
BfaI CTAG 7 cut(s) 419, 494, 575, 951, 956, 1185, 1419
BglII AGATCT 1 cut(s) 208
BisI GCNGC 5 cut(s) 411, 487, 974, 1034, 1095
BlnI CCTAGG 1 cut(s) 950
BlsI GCNGC 5 cut(s) 412, 488, 975, 1035, 1096
Bme1390I CCNGG 3 cut(s) 108, 181, 537
Bme18I GGWCC 1 cut(s) 578
BmgBI CACGTC 1 cut(s) 329
BmgT120I GGNCC 1 cut(s) 578
BmiI GGNNCC 2 cut(s) 241, 741
BmrFI CCNGG 3 cut(s) 108, 181, 537
BmsI GCATC 3 cut(s) 196, 1142, 1540
BpiI GAAGAC 1 cut(s) 956
BplI GAGNNNNNCTC 2 cut(s) 356, 388
BpmI CTGGAG 1 cut(s) 818
Bpu10I CCTNAGC 2 cut(s) 563, 1461
BpuEI CTTGAG 3 cut(s) 441, 1013, 1539
Bsa29I ATCGAT 1 cut(s) 1305
BsaAI YACGTR 1 cut(s) 1535
BsaBI GATNNNNATC 1 cut(s) 1085
BsaJI CCNNGG 6 cut(s) 106, 355, 535, 825, 950, 1407
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 2 cut(s) 361, 398
Bse118I RCCGGY 1 cut(s) 1328
Bse1I ACTGG 2 cut(s) 39, 801
Bse3DI GCAATG 1 cut(s) 557
Bse8I GATNNNNATC 1 cut(s) 1085
BseBI CCWGG 3 cut(s) 108, 181, 537
BseCI ATCGAT 1 cut(s) 1305
BseDI CCNNGG 6 cut(s) 106, 355, 535, 825, 950, 1407
BseGI GGATG 3 cut(s) 187, 1477, 1495
BseJI GATNNNNATC 1 cut(s) 1085
BseLI CCNNNNNNNGG 2 cut(s) 361, 398
BseMI GCAATG 1 cut(s) 557
BseMII CTCAG 1 cut(s) 1452
BseNI ACTGG 2 cut(s) 39, 801
BseRI GAGGAG 3 cut(s) 573, 1394, 1463
BseXI GCAGC 3 cut(s) 397, 1020, 1081
BsgI GTGCAG 3 cut(s) 730, 1019, 1080
BshFI GGCC 5 cut(s) 87, 205, 489, 1259, 1406
BshVI ATCGAT 1 cut(s) 1305
BsiHKAI GWGCWC 2 cut(s) 457, 774
BsiSI CCGG 1 cut(s) 1329
BslFI GGGAC 1 cut(s) 1496
BslI CCNNNNNNNGG 2 cut(s) 361, 398
BsmAI GTCTC 2 cut(s) 842, 1469
BsmBI CGTCTC 1 cut(s) 1469
BsmFI GGGAC 1 cut(s) 1496
BsmI GAATGC 2 cut(s) 1176, 1266
BsnI GGCC 5 cut(s) 87, 205, 489, 1259, 1406
Bsp1286I GDGCHC 3 cut(s) 457, 742, 774
Bsp143I GATC 5 cut(s) 208, 466, 539, 1042, 1306
Bsp19I CCATGG 1 cut(s) 355
BspACI CCGC 3 cut(s) 486, 973, 1055
BspANI GGCC 5 cut(s) 87, 205, 489, 1259, 1406
BspCNI CTCAG 1 cut(s) 1453
BspDI ATCGAT 1 cut(s) 1305
BspLI GGNNCC 2 cut(s) 241, 741
BspPI GGATC 3 cut(s) 547, 1050, 1301
BsrDI GCAATG 1 cut(s) 557
BsrFI RCCGGY 1 cut(s) 1328
BsrI ACTGG 2 cut(s) 39, 801
BssAI RCCGGY 1 cut(s) 1328
BssECI CCNNGG 6 cut(s) 106, 355, 535, 825, 950, 1407
BssMI GATC 5 cut(s) 208, 466, 539, 1042, 1306
BssSI CACGAG 1 cut(s) 943
BssT1I CCWWGG 3 cut(s) 355, 825, 950
Bst2BI CACGAG 1 cut(s) 943
Bst2UI CCWGG 3 cut(s) 108, 181, 537
Bst4CI ACNGT 2 cut(s) 1126, 1430
Bst6I CTCTTC 3 cut(s) 1371, 1395, 1494
BstBAI YACGTR 1 cut(s) 1535
BstC8I GCNNGC 1 cut(s) 257
BstDEI CTNAG 2 cut(s) 563, 1461
BstDSI CCRYGG 2 cut(s) 355, 1407
BstF5I GGATG 3 cut(s) 187, 1477, 1495
BstHHI GCGC 1 cut(s) 127
BstKTI GATC 5 cut(s) 211, 469, 542, 1045, 1309
BstMAI GTCTC 2 cut(s) 842, 1469
BstMBI GATC 5 cut(s) 208, 466, 539, 1042, 1306
BstNI CCWGG 3 cut(s) 108, 181, 537
BstNSI RCATGY 1 cut(s) 81
BstSCI CCNGG 3 cut(s) 106, 179, 535
BstSNI TACGTA 1 cut(s) 1535
BstV1I GCAGC 3 cut(s) 397, 1020, 1081
BstV2I GAAGAC 1 cut(s) 956
BstX2I RGATCY 3 cut(s) 208, 539, 1042
BstXI CCANNNNNNTGG 1 cut(s) 168
BstYI RGATCY 3 cut(s) 208, 539, 1042
Bsu15I ATCGAT 1 cut(s) 1305
BsuRI GGCC 5 cut(s) 87, 205, 489, 1259, 1406
BsuTUI ATCGAT 1 cut(s) 1305
BtgI CCRYGG 2 cut(s) 355, 1407
BtrI CACGTC 1 cut(s) 329
BtsCI GGATG 3 cut(s) 187, 1477, 1495
BtsI GCAGTG 2 cut(s) 718, 805
BtsIMutI CAGTG 3 cut(s) 718, 805, 1435
Cac8I GCNNGC 1 cut(s) 257
CfoI GCGC 1 cut(s) 127
Cfr10I RCCGGY 1 cut(s) 1328
Cfr13I GGNCC 1 cut(s) 578
ClaI ATCGAT 1 cut(s) 1305
Csp6I GTAC 3 cut(s) 175, 1127, 1243
CviAII CATG 6 cut(s) 78, 356, 859, 923, 1223, 1351
CviQI GTAC 3 cut(s) 175, 1127, 1243
DdeI CTNAG 2 cut(s) 563, 1461
DpnI GATC 5 cut(s) 210, 468, 541, 1044, 1308
DpnII GATC 5 cut(s) 208, 466, 539, 1042, 1306
EaeI YGGCCR 1 cut(s) 1257
Eam1104I CTCTTC 3 cut(s) 1371, 1395, 1494
EarI CTCTTC 3 cut(s) 1371, 1395, 1494
Ecl136II GAGCTC 1 cut(s) 455
Eco105I TACGTA 1 cut(s) 1535
Eco130I CCWWGG 3 cut(s) 355, 825, 950
Eco24I GRGCYC 2 cut(s) 457, 742
Eco47I GGWCC 1 cut(s) 578
Eco53kI GAGCTC 1 cut(s) 455
EcoICRI GAGCTC 1 cut(s) 455
EcoO109I RGGNCCY 1 cut(s) 578
EcoRII CCWGG 3 cut(s) 106, 179, 535
EcoT14I CCWWGG 3 cut(s) 355, 825, 950
EcoT38I GRGCYC 2 cut(s) 457, 742
ErhI CCWWGG 3 cut(s) 355, 825, 950
Esp3I CGTCTC 1 cut(s) 1469
FaeI CATG 6 cut(s) 81, 359, 862, 926, 1226, 1354
FalI AAGNNNNNCTT 2 cut(s) 1022, 1054
FaqI GGGAC 1 cut(s) 1496
FatI CATG 6 cut(s) 77, 355, 858, 922, 1222, 1350
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 5 cut(s) 411, 487, 974, 1034, 1095
FokI GGATG 3 cut(s) 174, 1484, 1502
FriOI GRGCYC 2 cut(s) 457, 742
Fsp4HI GCNGC 5 cut(s) 411, 487, 974, 1034, 1095
FspBI CTAG 7 cut(s) 419, 494, 575, 951, 956, 1185, 1419
GlaI GCGC 1 cut(s) 126
GluI GCNGC 5 cut(s) 411, 487, 974, 1034, 1095
GsuI CTGGAG 1 cut(s) 818
HaeIII GGCC 5 cut(s) 87, 205, 489, 1259, 1406
HapII CCGG 1 cut(s) 1329
HhaI GCGC 1 cut(s) 127
Hin1II CATG 6 cut(s) 81, 359, 862, 926, 1226, 1354
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HincII GTYRAC 1 cut(s) 370
HindII GTYRAC 1 cut(s) 370
HindIII AAGCTT 1 cut(s) 347
HpaII CCGG 1 cut(s) 1329
HphI GGTGA 5 cut(s) 3, 1044, 1162, 1349, 1424
Hpy166II GTNNAC 2 cut(s) 49, 370
Hpy188I TCNGA 5 cut(s) 239, 627, 895, 1080, 1272
Hpy188III TCNNGA 5 cut(s) 212, 494, 587, 1162, 1362
Hpy8I GTNNAC 2 cut(s) 49, 370
HpyAV CCTTC 5 cut(s) 24, 77, 500, 830, 1339
HpyCH4III ACNGT 2 cut(s) 1126, 1430
HpyCH4IV ACGT 3 cut(s) 222, 328, 1534
HpyF3I CTNAG 2 cut(s) 563, 1461
HpySE526I ACGT 3 cut(s) 222, 328, 1534
Hsp92II CATG 6 cut(s) 81, 359, 862, 926, 1226, 1354
HspAI GCGC 1 cut(s) 125
Kzo9I GATC 5 cut(s) 208, 466, 539, 1042, 1306
LmnI GCTCC 3 cut(s) 452, 745, 777
Lsp1109I GCAGC 3 cut(s) 397, 1020, 1081
LweI GCATC 3 cut(s) 196, 1142, 1540
MaeI CTAG 7 cut(s) 419, 494, 575, 951, 956, 1185, 1419
MaeII ACGT 3 cut(s) 222, 328, 1534
MalI GATC 5 cut(s) 210, 468, 541, 1044, 1308
MboI GATC 5 cut(s) 208, 466, 539, 1042, 1306
MboII GAAGA 8 cut(s) 461, 956, 1004, 1121, 1180, 1388, 1412, 1511
MfeI CAATTG 2 cut(s) 89, 96
MflI RGATCY 3 cut(s) 208, 539, 1042
MhlI GDGCHC 3 cut(s) 457, 742, 774
MlsI TGGCCA 1 cut(s) 1259
MluNI TGGCCA 1 cut(s) 1259
MlyI GAGTC 1 cut(s) 365
MmeI TCCRAC 2 cut(s) 149, 1086
Mox20I TGGCCA 1 cut(s) 1259
MroXI GAANNNNTTC 3 cut(s) 429, 619, 963
MscI TGGCCA 1 cut(s) 1259
MseI TTAA 7 cut(s) 150, 264, 611, 687, 701, 1121, 1215
MslI CAYNNNNRTG 1 cut(s) 1062
Msp20I TGGCCA 1 cut(s) 1259
MspI CCGG 1 cut(s) 1329
MspR9I CCNGG 3 cut(s) 108, 181, 537
MunI CAATTG 2 cut(s) 89, 96
Mva1269I GAATGC 2 cut(s) 1176, 1266
MvaI CCWGG 3 cut(s) 108, 181, 537
NcoI CCATGG 1 cut(s) 355
NdeII GATC 5 cut(s) 208, 466, 539, 1042, 1306
NlaIII CATG 6 cut(s) 81, 359, 862, 926, 1226, 1354
NlaIV GGNNCC 2 cut(s) 241, 741
NspI RCATGY 1 cut(s) 81
PcsI WCGNNNNNNNCGW 1 cut(s) 1404
PctI GAATGC 2 cut(s) 1176, 1266
PdmI GAANNNNTTC 3 cut(s) 429, 619, 963
PfeI GAWTC 9 cut(s) 4, 28, 55, 430, 802, 911, 1188, 1219, 1358
PfoI TCCNGGA 1 cut(s) 179
PkrI GCNGC 5 cut(s) 412, 488, 975, 1035, 1096
PleI GAGTC 1 cut(s) 365
PpsI GAGTC 1 cut(s) 365
Ppu21I YACGTR 1 cut(s) 1535
PpuMI RGGWCCY 1 cut(s) 578
PshBI ATTAAT 1 cut(s) 150
PsiI TTATAA 1 cut(s) 1085
Psp124BI GAGCTC 1 cut(s) 457
Psp5II RGGWCCY 1 cut(s) 578
Psp6I CCWGG 3 cut(s) 106, 179, 535
PspGI CCWGG 3 cut(s) 106, 179, 535
PspN4I GGNNCC 2 cut(s) 241, 741
PspPI GGNCC 1 cut(s) 578
PspPPI RGGWCCY 1 cut(s) 578
PsuI RGATCY 3 cut(s) 208, 539, 1042
RsaI GTAC 3 cut(s) 176, 1128, 1244
RsaNI GTAC 3 cut(s) 175, 1127, 1243
RseI CAYNNNNRTG 1 cut(s) 1062
SacI GAGCTC 1 cut(s) 457
SaqAI TTAA 7 cut(s) 150, 264, 611, 687, 701, 1121, 1215
SatI GCNGC 5 cut(s) 411, 487, 974, 1034, 1095
Sau3AI GATC 5 cut(s) 208, 466, 539, 1042, 1306
Sau96I GGNCC 1 cut(s) 578
SchI GAGTC 1 cut(s) 365
ScrFI CCNGG 3 cut(s) 108, 181, 537
SduI GDGCHC 3 cut(s) 457, 742, 774
SfaNI GCATC 3 cut(s) 196, 1142, 1540
SinI GGWCC 1 cut(s) 578
SmiMI CAYNNNNRTG 1 cut(s) 1062
SmlI CTYRAG 3 cut(s) 456, 1028, 1554
SmoI CTYRAG 3 cut(s) 456, 1028, 1554
SnaBI TACGTA 1 cut(s) 1535
SsiI CCGC 3 cut(s) 486, 973, 1055
SspI AATATT 2 cut(s) 114, 817
SspMI CTAG 7 cut(s) 419, 494, 575, 951, 956, 1185, 1419
SstI GAGCTC 1 cut(s) 457
StyD4I CCNGG 3 cut(s) 106, 179, 535
StyI CCWWGG 3 cut(s) 355, 825, 950
TaaI ACNGT 2 cut(s) 1126, 1430
TaiI ACGT 3 cut(s) 225, 331, 1537
TaqI TCGA 2 cut(s) 1305, 1398
TaqII GACCGA 1 cut(s) 773
TauI GCSGC 2 cut(s) 489, 976
TfiI GAWTC 9 cut(s) 4, 28, 55, 430, 802, 911, 1188, 1219, 1358
Tru1I TTAA 7 cut(s) 150, 264, 611, 687, 701, 1121, 1215
Tru9I TTAA 7 cut(s) 150, 264, 611, 687, 701, 1121, 1215
TscAI CASTG 3 cut(s) 718, 812, 1435
TseI GCWGC 3 cut(s) 410, 1033, 1094
TspRI CASTG 3 cut(s) 718, 812, 1435
VpaK11BI GGWCC 1 cut(s) 578
VspI ATTAAT 1 cut(s) 150
XapI RAATTY 8 cut(s) 215, 269, 338, 650, 882, 1112, 1275, 1528
XbaI TCTAGA 1 cut(s) 493
XceI RCATGY 1 cut(s) 81
XmaJI CCTAGG 1 cut(s) 950
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 3 cut(s) 429, 619, 963
XspI CTAG 7 cut(s) 419, 494, 575, 951, 956, 1185, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.