Rorug05G0566800

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000084
Physical Location & Seq
Forward (+)
76005286 .. 76007997
2712 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0566800.1

Sequence Viewer

Length: 1236 bp
ATGGCCAACTCCGACCACCACCACCACCTCCTCCCCACCCCGACCCTCGACTCCGAGTCCTCCACGCTCCTCCACACCCTCTCCGAGCACGGCGGCTACGCCTACGTCAGCATGGCCACACGCGCCGCCGCCGGCGACGTCCGGGCCGGGGAGGCCGCTCGTGAGATGGCCTGGGAGCAGCTCCACTCCGGCCCCTGGCACTCCGTCCTCCCCGTCTGGCGCGACGCCTACGCAATGGCCTGCCTCCACGTCGCCAAGCTCCACTTCGCCGCCGCTGAGTTCACCGACGCCCTCCGCGCCCTCGACATGGGCCTCCTCATGGGCGGCCCGCTGTTCAAATCGGACCTCCACGCCGCCGTGACTAAAGTCTCCGCTAAATCCAGACCGGCCGCCGTTAGGGTTTCAGAACAAAACGGCCCCAATTTGGACCGCCGTCTGGTCCGTGACGACTTCAAAGCAACGGAGATGCTTGGGGTTTTGCCTCCAAAATCACTATCTTGTAAAACGGTTGTGAAGAAGTCTGGTCTATCTTTGGAAGGGTTTTTACGAGAACATTTCTTACCGGGATTGCCGGTTATTTTGACTGATTGTATGGCGCATTGGCCGGCGAGGGCGAAGTGGAATGACATGGATTACCTGACAAGAGTTGCCGGTGACCGGACGGTGCCGGTTGAGGTTGGGAAAAATTATTTGTATCCGGAGTGGAAGCAGGAGCTTATTACGTTTTCGCAGTTTCTTGAGAGGATTCGGGGTAATGACTCTTCCTCTGGTGCCCCGACGTATCTTGCTCAGCACTCATTGTTTGATCAGATAAACGAGCTGCGTGAGGACATATGTATTCCCGACTATTGTTGTGCTGGTGGTGGGGAGCTAAGGTCTCTAAATGCTTGGTTTGGTCCGGCTGGGACTGTAACCCCATTACACCATGACCCGCACCATAATGTGTTTGCTCAGGTAGTTGGAAAAAAGTATATAAGGCTCTATCGTGCTTCATTGTCAGAGGAACTCTATCCACATACTGAAACCATGCTTTGCAACTCAAGTCAGGTTGATCTTGACAATGTAGATGAGAGAGAATTCCCGGAGGTGCAGGACTTAGAATTTCTTGACTGCATATTAGAGGAAGGTGACATGCTTTATATCCCACCAAAGTGGTGGCACTATGTGCGGTCTCTGACAACAAGTATGTCAGTTAGCTTTTGGTGGAGTGATTATGACAGTTCAGCTACGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

411

Amino Acids

46.11

Weight (kDa)

5.64

Isoelectric Point (pI)

42.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_KDM8_N PF24472 13 - 135 4.9e-62 KDM8-like, N-terminal ARM repeats
Cupin_8 PF13621 181 - 404 1.6e-48 Cupin-like domain
JmjC_2 PF08007 295 - 400 1.2e-11 JmjC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 141
AccB1I GGYRCC 2 cut(s) 664, 770
AccBSI CCGCTC 1 cut(s) 158
AccII CGCG 3 cut(s) 123, 222, 297
AccIII TCCGGA 1 cut(s) 697
AcoI YGGCCR 4 cut(s) 3, 114, 387, 602
AcsI RAATTY 2 cut(s) 1076, 1100
AcyI GRCGYC 3 cut(s) 138, 225, 288
AdeI CACNNNGTG 1 cut(s) 1165
AfiI CCNNNNNNNGG 8 cut(s) 148, 195, 307, 319, 396, 424, 436, 657
AgsI TTSAA 2 cut(s) 337, 454
AhdI GACNNNNNGTC 1 cut(s) 55
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 2 cut(s) 170, 194
AjuI GAANNNNNNNTTGG 2 cut(s) 248, 280
AleI CACNNNNGTG 1 cut(s) 1150
AluBI AGCT 7 cut(s) 181, 259, 715, 820, 871, 1197, 1226
AluI AGCT 7 cut(s) 181, 259, 715, 820, 871, 1197, 1226
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 3 cut(s) 373, 882, 1176
Aor13HI TCCGGA 1 cut(s) 697
ApeKI GCWGC 2 cut(s) 178, 820
ApoI RAATTY 2 cut(s) 1076, 1100
AspLEI GCGC 4 cut(s) 125, 222, 299, 598
AspS9I GGNCC 9 cut(s) 144, 191, 310, 326, 343, 416, 427, 439, 896
AsuC2I CCSGG 4 cut(s) 143, 148, 564, 1082
AsuHPI GGTGA 3 cut(s) 274, 665, 1139
AvaII GGWCC 4 cut(s) 343, 427, 439, 896
BaeGI GKGCMC 1 cut(s) 775
BalI TGGCCA 2 cut(s) 5, 116
BanI GGYRCC 2 cut(s) 664, 770
BarI GAAGNNNNNNTAC 4 cut(s) 528, 560, 745, 777
BauI CACGAG 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 90
BbvI GCAGC 2 cut(s) 190, 807
BccI CCATC 1 cut(s) 160
BceAI ACGGC 5 cut(s) 106, 341, 377, 417, 430
BciT130I CCWGG 2 cut(s) 172, 196
BciVI GTATCC 1 cut(s) 705
BclI TGATCA 1 cut(s) 805
BcnI CCSGG 4 cut(s) 143, 148, 564, 1082
BcoDI GTCTC 3 cut(s) 373, 882, 1176
BfuI GTATCC 1 cut(s) 705
BglI GCCNNNNNGGC 1 cut(s) 152
BlpI GCTNAGC 1 cut(s) 789
Bme1390I CCNGG 6 cut(s) 143, 148, 172, 196, 564, 1082
Bme18I GGWCC 4 cut(s) 343, 427, 439, 896
BmeRI GACNNNNNGTC 1 cut(s) 55
BmgBI CACGTC 1 cut(s) 250
BmgT120I GGNCC 9 cut(s) 144, 191, 310, 326, 343, 416, 427, 439, 896
BmiI GGNNCC 4 cut(s) 193, 418, 666, 772
BmrFI CCNGG 6 cut(s) 143, 148, 172, 196, 564, 1082
BmsI GCATC 1 cut(s) 456
BoxI GACNNNNGTC 2 cut(s) 365, 432
Bpu10I CCTNAGC 2 cut(s) 872, 951
Bpu1102I GCTNAGC 1 cut(s) 789
BpuEI CTTGAG 2 cut(s) 758, 1024
BpuMI CCSGG 4 cut(s) 143, 148, 564, 1082
BsaHI GRCGYC 3 cut(s) 138, 225, 288
BsaI GGTCTC 2 cut(s) 882, 1176
BsaJI CCNNGG 3 cut(s) 147, 171, 194
BsaWI WCCGGW 2 cut(s) 657, 697
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 860, 890
Bsc4I CCNNNNNNNGG 8 cut(s) 148, 195, 307, 319, 396, 424, 436, 657
Bse118I RCCGGY 6 cut(s) 131, 385, 571, 604, 650, 667
Bse3DI GCAATG 1 cut(s) 240
BseAI TCCGGA 1 cut(s) 697
BseBI CCWGG 2 cut(s) 172, 196
BseDI CCNNGG 3 cut(s) 147, 171, 194
BseLI CCNNNNNNNGG 8 cut(s) 148, 195, 307, 319, 396, 424, 436, 657
BseMI GCAATG 1 cut(s) 240
BseMII CTCAG 3 cut(s) 267, 803, 965
BseRI GAGGAG 3 cut(s) 20, 59, 305
BseSI GKGCMC 1 cut(s) 775
BseX3I CGGCCG 1 cut(s) 387
BseXI GCAGC 2 cut(s) 190, 807
BseYI CCCAGC 1 cut(s) 902
BsgI GTGCAG 1 cut(s) 1109
Bsh1236I CGCG 3 cut(s) 123, 222, 297
Bsh1285I CGRYCG 1 cut(s) 390
BshNI GGYRCC 2 cut(s) 664, 770
BsiEI CGRYCG 1 cut(s) 390
BsiHKAI GWGCWC 1 cut(s) 90
BslFI GGGAC 1 cut(s) 919
BslI CCNNNNNNNGG 8 cut(s) 148, 195, 307, 319, 396, 424, 436, 657
BsmAI GTCTC 3 cut(s) 373, 882, 1176
BsmFI GGGAC 1 cut(s) 919
Bso31I GGTCTC 2 cut(s) 882, 1176
Bsp1286I GDGCHC 2 cut(s) 90, 775
Bsp13I TCCGGA 1 cut(s) 697
Bsp143I GATC 2 cut(s) 805, 1051
Bsp1720I GCTNAGC 1 cut(s) 789
BspCNI CTCAG 3 cut(s) 268, 802, 964
BspEI TCCGGA 1 cut(s) 697
BspFNI CGCG 3 cut(s) 123, 222, 297
BspLI GGNNCC 4 cut(s) 193, 418, 666, 772
BspT107I GGYRCC 2 cut(s) 664, 770
BspTNI GGTCTC 2 cut(s) 882, 1176
BsrBI CCGCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 240
BsrFI RCCGGY 6 cut(s) 131, 385, 571, 604, 650, 667
BssAI RCCGGY 6 cut(s) 131, 385, 571, 604, 650, 667
BssECI CCNNGG 3 cut(s) 147, 171, 194
BssMI GATC 2 cut(s) 805, 1051
BssNI GRCGYC 3 cut(s) 138, 225, 288
BssSI CACGAG 1 cut(s) 159
Bst2BI CACGAG 1 cut(s) 159
Bst2UI CCWGG 2 cut(s) 172, 196
Bst4CI ACNGT 4 cut(s) 508, 664, 910, 1220
Bst6I CTCTTC 1 cut(s) 766
BstACI GRCGYC 3 cut(s) 138, 225, 288
BstAPI GCANNNNNTGC 1 cut(s) 1165
BstC8I GCNNGC 4 cut(s) 133, 241, 329, 606
BstDEI CTNAG 5 cut(s) 276, 789, 872, 951, 1096
BstEII GGTNACC 1 cut(s) 653
BstFNI CGCG 3 cut(s) 123, 222, 297
BstHHI GCGC 4 cut(s) 125, 222, 299, 598
BstKTI GATC 2 cut(s) 808, 1054
BstMAI GTCTC 3 cut(s) 373, 882, 1176
BstMBI GATC 2 cut(s) 805, 1051
BstMCI CGRYCG 1 cut(s) 390
BstMWI GCNNNNNNNGC 4 cut(s) 122, 152, 296, 1165
BstNI CCWGG 2 cut(s) 172, 196
BstNSI RCATGY 1 cut(s) 1135
BstPAI GACNNNNGTC 2 cut(s) 365, 432
BstPI GGTNACC 1 cut(s) 653
BstSCI CCNGG 6 cut(s) 141, 146, 170, 194, 562, 1080
BstSLI GKGCMC 1 cut(s) 775
BstUI CGCG 3 cut(s) 123, 222, 297
BstV1I GCAGC 2 cut(s) 190, 807
BstXI CCANNNNNNTGG 2 cut(s) 1152, 1155
BstZI CGGCCG 1 cut(s) 387
BsuI GTATCC 1 cut(s) 705
BtrI CACGTC 1 cut(s) 250
Cac8I GCNNGC 4 cut(s) 133, 241, 329, 606
CfoI GCGC 4 cut(s) 125, 222, 299, 598
Cfr10I RCCGGY 6 cut(s) 131, 385, 571, 604, 650, 667
Cfr13I GGNCC 9 cut(s) 144, 191, 310, 326, 343, 416, 427, 439, 896
CseI GACGC 2 cut(s) 233, 296
CviAII CATG 7 cut(s) 112, 307, 319, 628, 926, 1027, 1132
DdeI CTNAG 5 cut(s) 276, 789, 872, 951, 1096
DpnI GATC 2 cut(s) 807, 1053
DpnII GATC 2 cut(s) 805, 1051
DraIII CACNNNGTG 1 cut(s) 1165
DriI GACNNNNNGTC 1 cut(s) 55
EaeI YGGCCR 4 cut(s) 3, 114, 387, 602
EagI CGGCCG 1 cut(s) 387
Eam1104I CTCTTC 1 cut(s) 766
Eam1105I GACNNNNNGTC 1 cut(s) 55
EarI CTCTTC 1 cut(s) 766
EclXI CGGCCG 1 cut(s) 387
Eco31I GGTCTC 2 cut(s) 882, 1176
Eco47I GGWCC 4 cut(s) 343, 427, 439, 896
Eco52I CGGCCG 1 cut(s) 387
Eco91I GGTNACC 1 cut(s) 653
EcoO65I GGTNACC 1 cut(s) 653
EcoRI GAATTC 1 cut(s) 1076
EcoRII CCWGG 2 cut(s) 170, 194
FaeI CATG 7 cut(s) 115, 310, 322, 631, 929, 1030, 1135
FalI AAGNNNNNCTT 2 cut(s) 248, 280
FaqI GGGAC 1 cut(s) 919
FatI CATG 7 cut(s) 111, 306, 318, 627, 925, 1026, 1131
FauI CCCGC 2 cut(s) 336, 939
FauNDI CATATG 1 cut(s) 833
FbaI TGATCA 1 cut(s) 805
GlaI GCGC 4 cut(s) 124, 221, 298, 597
GsaI CCCAGC 1 cut(s) 906
HgaI GACGC 2 cut(s) 233, 296
HhaI GCGC 4 cut(s) 125, 222, 299, 598
Hin1I GRCGYC 3 cut(s) 138, 225, 288
Hin1II CATG 7 cut(s) 115, 310, 322, 631, 929, 1030, 1135
Hin6I GCGC 4 cut(s) 123, 220, 297, 596
HinP1I GCGC 4 cut(s) 123, 220, 297, 596
HinfI GANTC 4 cut(s) 50, 56, 745, 758
HphI GGTGA 3 cut(s) 274, 665, 1139
Hpy166II GTNNAC 1 cut(s) 282
Hpy188I TCNGA 8 cut(s) 13, 55, 85, 343, 406, 810, 1000, 1176
Hpy188III TCNNGA 8 cut(s) 161, 381, 698, 737, 842, 1055, 1106, 1233
Hpy8I GTNNAC 1 cut(s) 282
Hpy99I CGWCG 5 cut(s) 140, 227, 254, 290, 781
HpyAV CCTTC 2 cut(s) 530, 1118
HpyCH4III ACNGT 4 cut(s) 508, 664, 910, 1220
HpyCH4IV ACGT 6 cut(s) 105, 138, 249, 722, 779, 1229
HpyCH4V TGCA 3 cut(s) 1035, 1090, 1113
HpyF10VI GCNNNNNNNGC 4 cut(s) 122, 152, 296, 1165
HpyF3I CTNAG 5 cut(s) 276, 789, 872, 951, 1096
HpySE526I ACGT 6 cut(s) 105, 138, 249, 722, 779, 1229
Hsp92I GRCGYC 3 cut(s) 138, 225, 288
Hsp92II CATG 7 cut(s) 115, 310, 322, 631, 929, 1030, 1135
HspAI GCGC 4 cut(s) 123, 220, 297, 596
Kpn2I TCCGGA 1 cut(s) 697
KroI GCCGGC 2 cut(s) 131, 604
KroNI GCCGGC 2 cut(s) 133, 606
Ksp22I TGATCA 1 cut(s) 805
Kzo9I GATC 2 cut(s) 805, 1051
LmnI GCTCC 6 cut(s) 72, 175, 186, 264, 712, 868
Lsp1109I GCAGC 2 cut(s) 190, 807
LweI GCATC 1 cut(s) 456
MaeII ACGT 6 cut(s) 105, 138, 249, 722, 779, 1229
MaeIII GTNAC 5 cut(s) 358, 443, 653, 910, 1127
MalI GATC 2 cut(s) 807, 1053
MbiI CCGCTC 1 cut(s) 158
MboI GATC 2 cut(s) 805, 1051
MboII GAAGA 2 cut(s) 526, 753
MhlI GDGCHC 2 cut(s) 90, 775
MlsI TGGCCA 2 cut(s) 5, 116
MluCI AATT 4 cut(s) 421, 685, 1076, 1100
MluNI TGGCCA 2 cut(s) 5, 116
MlyI GAGTC 3 cut(s) 44, 65, 752
MmeI TCCRAC 2 cut(s) 36, 940
Mox20I TGGCCA 2 cut(s) 5, 116
MreI CGCCGGCG 1 cut(s) 131
MroI TCCGGA 1 cut(s) 697
MroNI GCCGGC 2 cut(s) 131, 604
MscI TGGCCA 2 cut(s) 5, 116
MslI CAYNNNNRTG 2 cut(s) 939, 1150
Msp20I TGGCCA 2 cut(s) 5, 116
MspA1I CMGCKG 2 cut(s) 275, 331
MspR9I CCNGG 6 cut(s) 143, 148, 172, 196, 564, 1082
MvaI CCWGG 2 cut(s) 172, 196
MvnI CGCG 3 cut(s) 123, 222, 297
MwoI GCNNNNNNNGC 4 cut(s) 122, 152, 296, 1165
NaeI GCCGGC 2 cut(s) 133, 606
NciI CCSGG 4 cut(s) 143, 148, 564, 1082
NdeI CATATG 1 cut(s) 833
NdeII GATC 2 cut(s) 805, 1051
NgoMIV GCCGGC 2 cut(s) 131, 604
NlaIII CATG 7 cut(s) 115, 310, 322, 631, 929, 1030, 1135
NlaIV GGNNCC 4 cut(s) 193, 418, 666, 772
NmuCI GTSAC 4 cut(s) 358, 443, 653, 1127
NspI RCATGY 1 cut(s) 1135
OliI CACNNNNGTG 1 cut(s) 1150
PdiI GCCGGC 2 cut(s) 133, 606
PfeI GAWTC 1 cut(s) 745
PfoI TCCNGGA 1 cut(s) 1080
PleI GAGTC 3 cut(s) 44, 64, 752
PpsI GAGTC 3 cut(s) 44, 64, 752
PshAI GACNNNNGTC 2 cut(s) 365, 432
Psp6I CCWGG 2 cut(s) 170, 194
PspEI GGTNACC 1 cut(s) 653
PspFI CCCAGC 1 cut(s) 902
PspGI CCWGG 2 cut(s) 170, 194
PspN4I GGNNCC 4 cut(s) 193, 418, 666, 772
PspPI GGNCC 9 cut(s) 144, 191, 310, 326, 343, 416, 427, 439, 896
PsrI GAACNNNNNNTAC 2 cut(s) 543, 575
RseI CAYNNNNRTG 2 cut(s) 939, 1150
Sau3AI GATC 2 cut(s) 805, 1051
Sau96I GGNCC 9 cut(s) 144, 191, 310, 326, 343, 416, 427, 439, 896
SchI GAGTC 3 cut(s) 44, 65, 752
ScrFI CCNGG 6 cut(s) 143, 148, 172, 196, 564, 1082
SduI GDGCHC 2 cut(s) 90, 775
SfaNI GCATC 1 cut(s) 456
SfiI GGCCNNNNNGGCC 1 cut(s) 152
SgrAI CRCCGGYG 1 cut(s) 131
SinI GGWCC 4 cut(s) 343, 427, 439, 896
SmiMI CAYNNNNRTG 2 cut(s) 939, 1150
SmlI CTYRAG 2 cut(s) 737, 1039
SmoI CTYRAG 2 cut(s) 737, 1039
Sse9I AATT 4 cut(s) 421, 685, 1076, 1100
StyD4I CCNGG 6 cut(s) 141, 146, 170, 194, 562, 1080
TaaI ACNGT 4 cut(s) 508, 664, 910, 1220
TaiI ACGT 6 cut(s) 108, 141, 252, 725, 782, 1232
TaqI TCGA 2 cut(s) 48, 303
TasI AATT 4 cut(s) 421, 685, 1076, 1100
TauI GCSGC 9 cut(s) 96, 128, 131, 158, 272, 275, 327, 356, 392
TfiI GAWTC 1 cut(s) 745
TseFI GTSAC 4 cut(s) 358, 443, 653, 1127
TseI GCWGC 2 cut(s) 178, 820
Tsp45I GTSAC 4 cut(s) 358, 443, 653, 1127
TspDTI ATGAA 1 cut(s) 981
TspGWI ACGGA 3 cut(s) 193, 431, 476
VpaK11BI GGWCC 4 cut(s) 343, 427, 439, 896
XapI RAATTY 2 cut(s) 1076, 1100
XceI RCATGY 1 cut(s) 1135
XcmI CCANNNNNNNNNTGG 1 cut(s) 1152
ZraI GACGTC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.