Rh2AG601200

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000084
Physical Location & Seq
Reverse (-)
82997366 .. 83001889
4524 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG601200.1

Sequence Viewer

Length: 1725 bp
ATGGACCGCAATGAAATAATAGCTGTGGTTGAGGAAGACAGTAAGGATTGGGTTAATAAATTTCCGGATTGCATTCTGTCATACATAATTTCTATTTTAAGAATAAAAGATGCAGTGGATACCTGCTTGATATCCCGGGGATGGAGGGACCTTTGGAAGGGTCCAATACTGACAAGGCCCAATCTGGAATTTGACATTCCAAACATTTTTGGAAGCAAGTATGCCAGGCTCATTGAGAAACATGAAGAAAAGGATAGACTTCCTTTTTTGGTTGATAGATTCGACAGACAATGCTTTGTAAGACGTGTGAATAAACTTTTGGAGCTCTACTCTGGAAACAAGGTAGAGTCTCTCAGAGTGGCATTCTTTTTTGATGTAGAATCTACGGCCATACTTGATAAGTGGATTCGTTTTGCAATTGCAAAGGGAGCTAAAATTCTCGACCTTCACTTATTAAATAGCACACATTGGGACTATGCAGAATTTTACGTTTTTCCCCACTGGATCCTTTCAGAGTTGAATAATGCATCAGCCCTAAAGCATTTGTCGCTGCACAGATGTGTTCTAAAACCGCCTACTGATTTCAACAGATTGGCTCAGCTAACAACTCTTTGTCTAAACAAGGTCTTCGTTGATCCAGGATTTTTGGAACATCTGTTCTCGATTTGTGTGCTCCTTGAAGGCTTGACGTTGATAAAATGCAGGGTGCGACTCTCAAATCTGATTATTGGTCCATCGTGTCACCTCAGGGATCTGAAGGTGCTCGAGTGCGATGAATTACTGAAAATAGAAATTGACGCAGTAAATCTTTCCTTCTTTGAATATGATGGAATTATTTTTGACATTTCTTGCATGAAAACTCCACATCTAGTAAGATTCTTTTTTAGGGGATTCAGTGGTATCTATGGATTACCTTATGCGTTCACCTTACTCGCCTTGTGTCCTGCCCTTGAGACTCTTCATCTGCAGTTGTTTACTGAACTGGAAAATATCCCCCAAACAGTTCCAACGTTTGGCAACCTCAAGCAAATGAACTTGGATCTCTTCCCGCCAAACTTTGACCTTTCGAGTGTTCTAAATATTCTGAAGGCTGCACCTCTTATGGAAGAATTTATAATTACGGTACGATCATCAGACTATGAAGGAGAGATAAGGAATATTTCCGGATTCTCACATAATTGTTTGAAAAAAGTAAAGATGCAGGGGTTCCAAGGGAAGTGGTTGGAGATAGAATTGGCCATTTGCATTCTTAAAATAGCAACAAAGCTTGAGGTAATGGTGATTGATCCACTTGGAAAATTCTACAAGGGTGGTGGAAGTTGGATTGATTTTGATTGTAGTTATTATGTCGAGGGAAACGAGGACAAGGATGAGGATGTAGAACCTCATGAAGAAATGAGCAATGGGAACGAGGACAGGGATGAGGGAGTAGATCTTGAGGAAGCAACTGAGACCTGTCATAAGGAAGTGGGTGTTGAGGGAGGGAGCGAGTACAACAATGAGATTGTCAATGAGGATGGGGGAGTGGATGTTGAAGAAGGGAATGAGCATGAGAACGAGGATGAGAGTTTGGATGCTCGAGAAATGAACAAGGACAAAGATGAGAATGACGACAAGGATGATGAGAAAACTTATGAACTTCTCCATTGGCAGAGAAGAGGGAGGGCTGTTGTCCAAGAAAGACTTGAGGAAATAAAGACTCATGCTCAAGTCATAATCCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

574

Amino Acids

66.17

Weight (kDa)

4.85

Isoelectric Point (pI)

45.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 110 - 431 6.2e-48 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 132 - 258 1.4e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1115
Acc36I ACCTGC 1 cut(s) 131
AccB7I CCANNNNNTGG 1 cut(s) 1013
AccIII TCCGGA 2 cut(s) 64, 1163
AciI CCGC 3 cut(s) 7, 572, 1049
AclI AACGTT 1 cut(s) 1010
AclWI GGATC 6 cut(s) 499, 512, 629, 759, 1047, 1280
AcoI YGGCCR 2 cut(s) 387, 1236
AcsI RAATTY 6 cut(s) 59, 188, 435, 482, 1109, 1298
AcuI CTGAAG 2 cut(s) 776, 1106
AfaI GTAC 2 cut(s) 1125, 1493
AfiI CCNNNNNNNGG 3 cut(s) 141, 157, 1013
AflIII ACRYGT 1 cut(s) 304
AgsI TTSAA 6 cut(s) 520, 586, 680, 821, 1186, 1535
AjiI CACGTC 1 cut(s) 305
AjnI CCWGG 2 cut(s) 224, 637
AjuI GAANNNNNNNTTGG 2 cut(s) 302, 334
AleI CACNNNNGTG 1 cut(s) 558
AloI GAACNNNNNNTCC 2 cut(s) 641, 673
AluBI AGCT 5 cut(s) 23, 325, 431, 601, 1267
AluI AGCT 5 cut(s) 23, 325, 431, 601, 1267
Alw21I GWGCWC 3 cut(s) 327, 675, 765
Alw26I GTCTC 3 cut(s) 354, 947, 1445
AlwI GGATC 6 cut(s) 499, 512, 629, 759, 1047, 1280
Ama87I CYCGRG 3 cut(s) 135, 764, 1578
Aor13HI TCCGGA 2 cut(s) 64, 1163
AoxI GGCC 3 cut(s) 176, 387, 1236
ApeKI GCWGC 2 cut(s) 550, 1091
ApoI RAATTY 6 cut(s) 59, 188, 435, 482, 1109, 1298
AspS9I GGNCC 5 cut(s) 4, 148, 161, 177, 731
AsuC2I CCSGG 2 cut(s) 136, 137
AsuHPI GGTGA 3 cut(s) 734, 916, 1291
AvaI CYCGRG 3 cut(s) 135, 764, 1578
AvaII GGWCC 4 cut(s) 4, 148, 161, 731
AxyI CCTNAGG 1 cut(s) 746
BalI TGGCCA 1 cut(s) 1238
BamHI GGATCC 1 cut(s) 504
BanII GRGCYC 1 cut(s) 327
BbsI GAAGAC 2 cut(s) 42, 619
Bbv12I GWGCWC 3 cut(s) 327, 675, 765
BbvI GCAGC 2 cut(s) 537, 1078
BccI CCATC 4 cut(s) 135, 742, 821, 1511
BceAI ACGGC 1 cut(s) 402
BcgI CGANNNNNNTGC 2 cut(s) 652, 686
BciT130I CCWGG 2 cut(s) 226, 639
BciVI GTATCC 1 cut(s) 112
BcnI CCSGG 2 cut(s) 136, 137
BcoDI GTCTC 3 cut(s) 354, 947, 1445
BfaI CTAG 1 cut(s) 869
BfmI CTRYAG 2 cut(s) 965, 1721
BfuAI ACCTGC 1 cut(s) 131
BfuI GTATCC 1 cut(s) 112
BglII AGATCT 1 cut(s) 1432
BisI GCNGC 2 cut(s) 551, 1092
BlpI GCTNAGC 1 cut(s) 597
BlsI GCNGC 2 cut(s) 552, 1093
Bme1390I CCNGG 4 cut(s) 136, 137, 226, 639
Bme18I GGWCC 4 cut(s) 4, 148, 161, 731
BmeT110I CYCGRG 3 cut(s) 135, 764, 1578
BmgBI CACGTC 1 cut(s) 305
BmgT120I GGNCC 5 cut(s) 4, 148, 161, 177, 731
BmiI GGNNCC 4 cut(s) 149, 162, 506, 1208
BmrFI CCNGG 4 cut(s) 136, 137, 226, 639
BmsI GCATC 4 cut(s) 100, 536, 1188, 1564
BpiI GAAGAC 2 cut(s) 42, 619
BplI GAGNNNNNCTC 2 cut(s) 314, 346
Bpu1102I GCTNAGC 1 cut(s) 597
BpuEI CTTGAG 6 cut(s) 971, 1007, 1289, 1457, 1692, 1706
BpuMI CCSGG 2 cut(s) 136, 137
BsaI GGTCTC 1 cut(s) 1445
BsaJI CCNNGG 3 cut(s) 135, 136, 1210
BsaWI WCCGGW 2 cut(s) 64, 1163
BsaXI ACNNNNNCTCC 2 cut(s) 1515, 1545
Bsc4I CCNNNNNNNGG 3 cut(s) 141, 157, 1013
Bse1I ACTGG 2 cut(s) 506, 987
Bse21I CCTNAGG 1 cut(s) 746
Bse3DI GCAATG 2 cut(s) 16, 1408
BseAI TCCGGA 2 cut(s) 64, 1163
BseBI CCWGG 2 cut(s) 226, 639
BseDI CCNNGG 3 cut(s) 135, 136, 1210
BseGI GGATG 9 cut(s) 146, 1375, 1381, 1426, 1522, 1534, 1567, 1579, 1624
BseLI CCNNNNNNNGG 3 cut(s) 141, 157, 1013
BseMI GCAATG 2 cut(s) 16, 1408
BseMII CTCAG 4 cut(s) 367, 611, 760, 1440
BseNI ACTGG 2 cut(s) 506, 987
BseXI GCAGC 2 cut(s) 537, 1078
BsgI GTGCAG 2 cut(s) 536, 1077
BshFI GGCC 3 cut(s) 178, 389, 1238
BsiHKAI GWGCWC 3 cut(s) 327, 675, 765
BsiHKCI CYCGRG 3 cut(s) 135, 764, 1578
BsiSI CCGG 3 cut(s) 65, 136, 1164
BslFI GGGAC 2 cut(s) 161, 485
BslI CCNNNNNNNGG 3 cut(s) 141, 157, 1013
BsmAI GTCTC 3 cut(s) 354, 947, 1445
BsmFI GGGAC 2 cut(s) 161, 485
BsmI GAATGC 3 cut(s) 72, 362, 1245
BsnI GGCC 3 cut(s) 178, 389, 1238
Bso31I GGTCTC 1 cut(s) 1445
BsoBI CYCGRG 3 cut(s) 135, 764, 1578
Bsp1286I GDGCHC 3 cut(s) 327, 675, 765
Bsp13I TCCGGA 2 cut(s) 64, 1163
Bsp143I GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
Bsp1720I GCTNAGC 1 cut(s) 597
BspACI CCGC 3 cut(s) 7, 572, 1049
BspANI GGCC 3 cut(s) 178, 389, 1238
BspCNI CTCAG 4 cut(s) 366, 610, 759, 1441
BspEI TCCGGA 2 cut(s) 64, 1163
BspHI TCATGA 1 cut(s) 1387
BspLI GGNNCC 4 cut(s) 149, 162, 506, 1208
BspMAI CTGCAG 1 cut(s) 969
BspMI ACCTGC 1 cut(s) 131
BspPI GGATC 6 cut(s) 499, 512, 629, 759, 1047, 1280
BspTNI GGTCTC 1 cut(s) 1445
BsrDI GCAATG 2 cut(s) 16, 1408
BsrI ACTGG 2 cut(s) 506, 987
BssECI CCNNGG 3 cut(s) 135, 136, 1210
BssMI GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
BssT1I CCWWGG 1 cut(s) 1210
Bst2UI CCWGG 2 cut(s) 226, 639
Bst4CI ACNGT 3 cut(s) 41, 1003, 1123
Bst6I CTCTTC 3 cut(s) 963, 1049, 1651
BstDEI CTNAG 4 cut(s) 353, 597, 746, 1449
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 9 cut(s) 146, 1375, 1381, 1426, 1522, 1534, 1567, 1579, 1624
BstKTI GATC 7 cut(s) 507, 637, 754, 1042, 1130, 1288, 1435
BstMAI GTCTC 3 cut(s) 354, 947, 1445
BstMBI GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
BstMWI GCNNNNNNNGC 2 cut(s) 428, 547
BstNI CCWGG 2 cut(s) 226, 639
BstSCI CCNGG 4 cut(s) 134, 135, 224, 637
BstSFI CTRYAG 2 cut(s) 965, 1721
BstV1I GCAGC 2 cut(s) 537, 1078
BstV2I GAAGAC 2 cut(s) 42, 619
BstX2I RGATCY 4 cut(s) 504, 751, 1039, 1432
BstYI RGATCY 4 cut(s) 504, 751, 1039, 1432
Bsu36I CCTNAGG 1 cut(s) 746
BsuI GTATCC 1 cut(s) 112
BsuRI GGCC 3 cut(s) 178, 389, 1238
BtgZI GCGATG 1 cut(s) 786
BtrI CACGTC 1 cut(s) 305
BtsCI GGATG 9 cut(s) 146, 1375, 1381, 1426, 1522, 1534, 1567, 1579, 1624
BtsI GCAGTG 1 cut(s) 120
BtsIMutI CAGTG 3 cut(s) 120, 499, 901
BveI ACCTGC 1 cut(s) 131
CciI TCATGA 1 cut(s) 1387
Cfr13I GGNCC 5 cut(s) 4, 148, 161, 177, 731
Cfr9I CCCGGG 1 cut(s) 135
CseI GACGC 1 cut(s) 806
Csp6I GTAC 2 cut(s) 1124, 1492
CspCI CAANNNNNGTGG 4 cut(s) 1199, 1234, 1294, 1329
CviAII CATG 5 cut(s) 242, 853, 1388, 1550, 1703
CviQI GTAC 2 cut(s) 1124, 1492
DdeI CTNAG 4 cut(s) 353, 597, 746, 1449
DpnI GATC 7 cut(s) 506, 636, 753, 1041, 1129, 1287, 1434
DpnII GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
EaeI YGGCCR 2 cut(s) 387, 1236
Eam1104I CTCTTC 3 cut(s) 963, 1049, 1651
EarI CTCTTC 3 cut(s) 963, 1049, 1651
Ecl136II GAGCTC 1 cut(s) 325
Eco130I CCWWGG 1 cut(s) 1210
Eco24I GRGCYC 1 cut(s) 327
Eco31I GGTCTC 1 cut(s) 1445
Eco32I GATATC 1 cut(s) 132
Eco47I GGWCC 4 cut(s) 4, 148, 161, 731
Eco53kI GAGCTC 1 cut(s) 325
Eco57I CTGAAG 2 cut(s) 776, 1106
Eco81I CCTNAGG 1 cut(s) 746
Eco88I CYCGRG 3 cut(s) 135, 764, 1578
EcoICRI GAGCTC 1 cut(s) 325
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoO109I RGGNCCY 1 cut(s) 148
EcoRII CCWGG 2 cut(s) 224, 637
EcoRV GATATC 1 cut(s) 132
EcoT14I CCWWGG 1 cut(s) 1210
EcoT22I ATGCAT 1 cut(s) 529
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 1 cut(s) 1210
FaeI CATG 5 cut(s) 245, 856, 1391, 1553, 1706
FalI AAGNNNNNCTT 2 cut(s) 1668, 1700
FaqI GGGAC 2 cut(s) 161, 485
FatI CATG 5 cut(s) 241, 852, 1387, 1549, 1702
FauI CCCGC 1 cut(s) 1056
Fnu4HI GCNGC 2 cut(s) 551, 1092
FokI GGATG 9 cut(s) 153, 1382, 1388, 1433, 1529, 1541, 1574, 1586, 1631
FriOI GRGCYC 1 cut(s) 327
Fsp4HI GCNGC 2 cut(s) 551, 1092
FspBI CTAG 1 cut(s) 869
GluI GCNGC 2 cut(s) 551, 1092
HaeIII GGCC 3 cut(s) 178, 389, 1238
HapII CCGG 3 cut(s) 65, 136, 1164
HgaI GACGC 1 cut(s) 806
Hin1II CATG 5 cut(s) 245, 856, 1391, 1553, 1706
HindIII AAGCTT 1 cut(s) 1265
HpaII CCGG 3 cut(s) 65, 136, 1164
HphI GGTGA 3 cut(s) 734, 916, 1291
Hpy166II GTNNAC 2 cut(s) 924, 975
Hpy188I TCNGA 6 cut(s) 356, 514, 723, 756, 1086, 1135
Hpy188III TCNNGA 9 cut(s) 65, 185, 333, 440, 661, 1164, 1388, 1436, 1580
Hpy8I GTNNAC 2 cut(s) 924, 975
HpyAV CCTTC 8 cut(s) 151, 455, 674, 751, 823, 1081, 1136, 1532
HpyCH4III ACNGT 3 cut(s) 41, 1003, 1123
HpyCH4IV ACGT 4 cut(s) 304, 489, 689, 1010
HpyF10VI GCNNNNNNNGC 2 cut(s) 428, 547
HpyF3I CTNAG 4 cut(s) 353, 597, 746, 1449
HpySE526I ACGT 4 cut(s) 304, 489, 689, 1010
Hsp92II CATG 5 cut(s) 245, 856, 1391, 1553, 1706
Kpn2I TCCGGA 2 cut(s) 64, 1163
Kzo9I GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
LmnI GCTCC 4 cut(s) 322, 428, 678, 1485
Lsp1109I GCAGC 2 cut(s) 537, 1078
LweI GCATC 4 cut(s) 100, 536, 1188, 1564
MaeI CTAG 1 cut(s) 869
MaeII ACGT 4 cut(s) 304, 489, 689, 1010
MaeIII GTNAC 1 cut(s) 740
MalI GATC 7 cut(s) 506, 636, 753, 1041, 1129, 1287, 1434
MboI GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
MboII GAAGA 9 cut(s) 47, 257, 619, 950, 1036, 1118, 1403, 1547, 1668
MfeI CAATTG 1 cut(s) 417
MflI RGATCY 4 cut(s) 504, 751, 1039, 1432
MhlI GDGCHC 3 cut(s) 327, 675, 765
MlsI TGGCCA 1 cut(s) 1238
MluNI TGGCCA 1 cut(s) 1238
MlyI GAGTC 4 cut(s) 356, 705, 949, 1693
MmeI TCCRAC 3 cut(s) 1031, 1203, 1301
Mox20I TGGCCA 1 cut(s) 1238
Mph1103I ATGCAT 1 cut(s) 529
MroI TCCGGA 2 cut(s) 64, 1163
MscI TGGCCA 1 cut(s) 1238
MseI TTAA 4 cut(s) 54, 98, 455, 1251
MslI CAYNNNNRTG 1 cut(s) 558
Msp20I TGGCCA 1 cut(s) 1238
MspI CCGG 3 cut(s) 65, 136, 1164
MspR9I CCNGG 4 cut(s) 136, 137, 226, 639
MunI CAATTG 1 cut(s) 417
Mva1269I GAATGC 3 cut(s) 72, 362, 1245
MvaI CCWGG 2 cut(s) 226, 639
MwoI GCNNNNNNNGC 2 cut(s) 428, 547
NciI CCSGG 2 cut(s) 136, 137
NdeII GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
NlaIII CATG 5 cut(s) 245, 856, 1391, 1553, 1706
NlaIV GGNNCC 4 cut(s) 149, 162, 506, 1208
NmuCI GTSAC 1 cut(s) 740
NsiI ATGCAT 1 cut(s) 529
OliI CACNNNNGTG 1 cut(s) 558
PaeR7I CTCGAG 2 cut(s) 764, 1578
PagI TCATGA 1 cut(s) 1387
PcsI WCGNNNNNNNCGW 1 cut(s) 1356
PctI GAATGC 3 cut(s) 72, 362, 1245
PfeI GAWTC 6 cut(s) 279, 380, 406, 876, 891, 1167
PflMI CCANNNNNTGG 1 cut(s) 1013
PfoI TCCNGGA 1 cut(s) 637
PkrI GCNGC 2 cut(s) 552, 1093
PleI GAGTC 4 cut(s) 355, 705, 949, 1693
PpsI GAGTC 4 cut(s) 355, 705, 949, 1693
PpuMI RGGWCCY 1 cut(s) 148
PsiI TTATAA 1 cut(s) 1115
Psp124BI GAGCTC 1 cut(s) 327
Psp1406I AACGTT 1 cut(s) 1010
Psp5II RGGWCCY 1 cut(s) 148
Psp6I CCWGG 2 cut(s) 224, 637
PspGI CCWGG 2 cut(s) 224, 637
PspN4I GGNNCC 4 cut(s) 149, 162, 506, 1208
PspPI GGNCC 5 cut(s) 4, 148, 161, 177, 731
PspPPI RGGWCCY 1 cut(s) 148
PspXI VCTCGAGB 1 cut(s) 764
PstI CTGCAG 1 cut(s) 969
PsuI RGATCY 4 cut(s) 504, 751, 1039, 1432
RsaI GTAC 2 cut(s) 1125, 1493
RsaNI GTAC 2 cut(s) 1124, 1492
RseI CAYNNNNRTG 1 cut(s) 558
SacI GAGCTC 1 cut(s) 327
SaqAI TTAA 4 cut(s) 54, 98, 455, 1251
SatI GCNGC 2 cut(s) 551, 1092
Sau3AI GATC 7 cut(s) 504, 634, 751, 1039, 1127, 1285, 1432
Sau96I GGNCC 5 cut(s) 4, 148, 161, 177, 731
SchI GAGTC 4 cut(s) 356, 705, 949, 1693
ScrFI CCNGG 4 cut(s) 136, 137, 226, 639
SduI GDGCHC 3 cut(s) 327, 675, 765
SfaNI GCATC 4 cut(s) 100, 536, 1188, 1564
SfcI CTRYAG 2 cut(s) 965, 1721
Sfr274I CTCGAG 2 cut(s) 764, 1578
SinI GGWCC 4 cut(s) 4, 148, 161, 731
SlaI CTCGAG 2 cut(s) 764, 1578
SmaI CCCGGG 1 cut(s) 137
SmiMI CAYNNNNRTG 1 cut(s) 558
SmlI CTYRAG 8 cut(s) 764, 950, 1022, 1268, 1436, 1578, 1685, 1707
SmoI CTYRAG 8 cut(s) 764, 950, 1022, 1268, 1436, 1578, 1685, 1707
SsiI CCGC 3 cut(s) 7, 572, 1049
SspI AATATT 2 cut(s) 1081, 1159
SspMI CTAG 1 cut(s) 869
SstI GAGCTC 1 cut(s) 327
StyD4I CCNGG 4 cut(s) 134, 135, 224, 637
StyI CCWWGG 1 cut(s) 1210
TaaI ACNGT 3 cut(s) 41, 1003, 1123
TaiI ACGT 4 cut(s) 307, 492, 692, 1013
TaqI TCGA 7 cut(s) 282, 441, 662, 765, 1067, 1350, 1579
TatI WGTACW 1 cut(s) 1491
TfiI GAWTC 6 cut(s) 279, 380, 406, 876, 891, 1167
Tru1I TTAA 4 cut(s) 54, 98, 455, 1251
Tru9I TTAA 4 cut(s) 54, 98, 455, 1251
TscAI CASTG 3 cut(s) 120, 506, 901
TseFI GTSAC 1 cut(s) 740
TseI GCWGC 2 cut(s) 550, 1091
Tsp45I GTSAC 1 cut(s) 740
TspMI CCCGGG 1 cut(s) 135
TspRI CASTG 3 cut(s) 120, 506, 901
Van91I CCANNNNNTGG 1 cut(s) 1013
VpaK11BI GGWCC 4 cut(s) 4, 148, 161, 731
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 6 cut(s) 59, 188, 435, 482, 1109, 1298
XhoI CTCGAG 2 cut(s) 764, 1578
XmaI CCCGGG 1 cut(s) 135
XspI CTAG 1 cut(s) 869
Zsp2I ATGCAT 1 cut(s) 529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.