FvH4_7g27481

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000084
Physical Location & Seq
Reverse (-)
20520931 .. 20525177
4247 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g27481.t1

Sequence Viewer

Length: 2244 bp
ATGAGAGATGCGGTGGAAACTAGCTTGATTTCCCGTCGGTGGAGGCACCTCTGGCGGCATTCAGTTCTCACCAGGCGCAATCTTGAATTCGACTATCCGAATGTCTTCGGTAGCAGACCGAGAAAGAATGATGATTTGGACAAGTTTGTGAAGGAGTATATGGAGCTCTATCAAGGTGAAAAGATAGACTCTTTAAAAGTAGAGCAAGACGACATTTTCTTACCTTTAATATCTCCTGGCAACCTTGATGATTGGGTTCGTTTTGCAATTGCAAAGGGAGTCGAAGAGATTCAGCTTTTGTTGGAATGGTCTTTATTTGACCATGAACATGAGTTGATATTCCCAGGCGCGAGTAGTACTCTGAAACACTTGACGTTGCGTGAATGTGATCTGCGACCTGCTCCTGATTTTGACGGGTTTAATAATCTAAGATCGCTCAGTCTAAGTTATGTAACCGTTGATCAAATTTTTATGGCACATCTCTTGTCTAATTGCTTGTTGCTTGAAAGCTTGACAATAGAGTACTGCAATGGACTTGCACATCTCTGTATAGTTGGTGATCGGCTAAGTGATCTGAAGCTGTCGCAATGCCCAAGAATTGAGATCTCTGCACCCAATCTCGTCTCGTTGGAATATAGTGGGGATTTTCCAAGCATTAATTTTGTTAGAACTCCACCACACTTGGCACGAATTGTAACTGAAGTCGAAAAGATGCATCCAGCAGTACTTTCTTGTCTTACATCGTTTCCTGAGCTCGAGACTCTTTCTCTGGCACATAGGGAGGAATGCGGAGAACTATCGCAAATCAACAGCGACTTGACCTTTAGAAATCTAAAGAAATTGAGCTTAGATCTGTCGCATTGGAATGAATATGATAATCTTGATCATCTCCAGTCTGCGCGGGATCTGCTCAAGGCTGCACCCCTCTTGGAAGAGTTCATACTGAATGATATTACCTTCAGGGATTCCGATGAAAGAAACCATCCACATGAAACAAGGAATAATGTTGAATGTTCAGGATCGTTCACGCATGATCACTTGAAAAGATTTGAACTGCAGTGGTTCAAGGGCAATTGGTATGAGATAGAGTTTGCCATTTGGATTCTAAAGAATGCAGCAAAGCTTGAGATTCTGGTGATTAATCTAGCACAACCCTTCTACTATGTAAATTCTGCAGCAGGATGGTCGAAAGACAGGATATTTCTCCAAGAAAAACTGGAGCAAAAGCCGAGGAAAAGAGTTGGAGAGTCAAATCCTCGTGATAAGGATAGGATGAATAATGGAGGCACCCCTGGCGGCATTCTGTACGTTCTCACCAGGCGCAATCTTGAATTCAACTATGTCAATGTCTTCAGAAGTCTCAGAATGAGAGAGAATGGTGATTTCGACAAGTTTATGAAAAAATATGTTTCTCCCTATGAGTTGCTGCTATTCCAAGGCGCGAGTAGTACTTTGAAACACTTGACGTTGCGTAGATGTGATCTGCGACCTCCTTCTGATTTTGACGGGTTTAATAATCTAAGATCCCTCGGTCTAACTTTTGTAACCGTTGATCAGATTTTTATGGCACATCTCTTGTCTAGCTGCTTGTTGCTTGAAAGCTTGGAAATAAAGCTCTGCTATGGACTTTCACATCTAAATATTGTTGGTGATCGTCTAAGTGATCTGAAGCTGTCGCGATGCAGAAGGATTGAGATTTCTGCACCTAATCTCGTCTCGTTGGAATATACTGGAGATTTCACCAGCATTATTTTTGTTACAACTCCACCACGGTTAGCAAGATTTGTAACTATAGTCGACGAGATGCATCGAAAATCTCAAGTAATTGACCTTAAAATCTGTGGCAACCTGATAATCTCCACCGTCTCCAGTCTCTGTGGGATCTCCTCAAGGCTGCACCCATTTGGGGGTCCCTTCGGGATCCCTGTTGAGAGAAATCATCAACATGAAACAAGGAATAATGTAGAATGTTCAGGATCGTTCACACATGATCACTTGAAGAGTGTTAAACTACAGCTGTTTCAGGGCAATTGGTATGAGATAGAGTTTGCCATTTGGATTTTGAAGAATGCAGCAAAGCTTGAGATTCTGGTGATTAATCCGGCAGGACACTACTACTATCTAAATTATGGAATATGGTGCAATCGTCGAGGTAGTTCATCTTGGAAAGAATACAGGGTAGTTGTCCAAGAAAAACTGGAGCAAGTAGAGACTAGTGCTCGAAATATAATCAAGTCTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

748

Amino Acids

86.39

Weight (kDa)

6.31

Isoelectric Point (pI)

46.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 78 - 384 4.9e-41 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 82 - 207 2.5e-13 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 465 - 583 2e-19 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 481 - 574 2e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 406
AccB1I GGYRCC 2 cut(s) 45, 1286
AccI GTMKAC 1 cut(s) 1797
AccII CGCG 4 cut(s) 350, 901, 1442, 1678
AciI CCGC 5 cut(s) 11, 55, 789, 901, 1296
AclWI GGATC 7 cut(s) 912, 1027, 1518, 1889, 1915, 1928, 1984
AcsI RAATTY 4 cut(s) 86, 465, 1168, 1331
AcuI CTGAAG 5 cut(s) 596, 720, 943, 1336, 1688
AfaI GTAC 5 cut(s) 358, 524, 726, 1307, 1450
AfiI CCNNNNNNNGG 3 cut(s) 39, 1906, 1907
AhlI ACTAGT 1 cut(s) 2213
AjnI CCWGG 5 cut(s) 71, 235, 343, 1291, 1316
AjuI GAANNNNNNNTTGG 2 cut(s) 119, 151
Alw21I GWGCWC 3 cut(s) 168, 756, 2221
Alw26I GTCTC 7 cut(s) 628, 752, 1364, 1720, 1870, 1877, 2204
AlwI GGATC 7 cut(s) 912, 1027, 1518, 1889, 1915, 1928, 1984
AlwNI CAGNNNCTG 1 cut(s) 1875
Ama87I CYCGRG 1 cut(s) 755
ApeKI GCWGC 7 cut(s) 917, 1115, 1175, 1426, 1584, 1894, 2072
ApoI RAATTY 4 cut(s) 86, 465, 1168, 1331
AseI ATTAAT 3 cut(s) 657, 1140, 2097
Asp700I GAANNNNTTC 2 cut(s) 104, 288
AspLEI GCGC 5 cut(s) 78, 350, 901, 1323, 1442
AspS9I GGNCC 1 cut(s) 1910
AsuHPI GGTGA 9 cut(s) 61, 188, 569, 1147, 1306, 1391, 1661, 1732, 2104
AvaI CYCGRG 1 cut(s) 755
AvaII GGWCC 1 cut(s) 1910
BamHI GGATCC 1 cut(s) 1920
BanI GGYRCC 2 cut(s) 45, 1286
BanII GRGCYC 2 cut(s) 168, 756
BarI GAAGNNNNNNTAC 2 cut(s) 924, 956
BauI CACGAG 1 cut(s) 1257
BbsI GAAGAC 2 cut(s) 97, 1342
Bbv12I GWGCWC 3 cut(s) 168, 756, 2221
BbvI GCAGC 7 cut(s) 904, 1127, 1187, 1413, 1571, 1881, 2084
BccI CCATC 2 cut(s) 990, 1176
BcgI CGANNNNNNTGC 2 cut(s) 1167, 1201
BciT130I CCWGG 5 cut(s) 73, 237, 345, 1293, 1318
BclI TGATCA 5 cut(s) 460, 883, 1033, 1552, 1990
BcoDI GTCTC 7 cut(s) 628, 752, 1364, 1720, 1870, 1877, 2204
BcuI ACTAGT 1 cut(s) 2213
BfaI CTAG 4 cut(s) 21, 1145, 1581, 2214
BfmI CTRYAG 4 cut(s) 1055, 1173, 1791, 2012
BfuAI ACCTGC 1 cut(s) 406
BglII AGATCT 2 cut(s) 603, 850
BisI GCNGC 9 cut(s) 56, 918, 1116, 1176, 1297, 1427, 1585, 1895, 2073
BlsI GCNGC 9 cut(s) 57, 919, 1117, 1177, 1298, 1428, 1586, 1896, 2074
BmcAI AGTACT 4 cut(s) 358, 524, 726, 1450
Bme1390I CCNGG 5 cut(s) 73, 237, 345, 1293, 1318
Bme18I GGWCC 1 cut(s) 1910
BmeT110I CYCGRG 1 cut(s) 755
BmgT120I GGNCC 1 cut(s) 1910
BmiI GGNNCC 5 cut(s) 47, 1288, 1911, 1912, 1922
BmrFI CCNGG 5 cut(s) 73, 237, 345, 1293, 1318
BmsI GCATC 5 cut(s) 702, 724, 1670, 1794, 1816
BpiI GAAGAC 2 cut(s) 97, 1342
BplI GAGNNNNNCTC 2 cut(s) 343, 375
BpmI CTGGAG 5 cut(s) 875, 1238, 1752, 1852, 2219
Bpu10I CCTNAGC 1 cut(s) 750
BpuEI CTTGAG 5 cut(s) 896, 1145, 1803, 1873, 2102
BsaJI CCNNGG 6 cut(s) 343, 1229, 1291, 1435, 1528, 1769
Bsc4I CCNNNNNNNGG 3 cut(s) 39, 1906, 1907
Bse1I ACTGG 5 cut(s) 892, 1221, 1735, 1869, 2202
Bse3DI GCAATG 2 cut(s) 535, 593
BseBI CCWGG 5 cut(s) 73, 237, 345, 1293, 1318
BseDI CCNNGG 6 cut(s) 343, 1229, 1291, 1435, 1528, 1769
BseGI GGATG 4 cut(s) 715, 982, 1187, 1278
BseLI CCNNNNNNNGG 3 cut(s) 39, 1906, 1907
BseMI GCAATG 2 cut(s) 535, 593
BseMII CTCAG 3 cut(s) 451, 741, 1375
BseNI ACTGG 5 cut(s) 892, 1221, 1735, 1869, 2202
BseRI GAGGAG 1 cut(s) 1876
BseXI GCAGC 7 cut(s) 904, 1127, 1187, 1413, 1571, 1881, 2084
BsgI GTGCAG 4 cut(s) 594, 903, 1686, 1880
Bsh1236I CGCG 4 cut(s) 350, 901, 1442, 1678
BshNI GGYRCC 2 cut(s) 45, 1286
BsiHKAI GWGCWC 3 cut(s) 168, 756, 2221
BsiHKCI CYCGRG 1 cut(s) 755
BsiSI CCGG 1 cut(s) 2102
BslFI GGGAC 1 cut(s) 1896
BslI CCNNNNNNNGG 3 cut(s) 39, 1906, 1907
BsmAI GTCTC 7 cut(s) 628, 752, 1364, 1720, 1870, 1877, 2204
BsmBI CGTCTC 3 cut(s) 628, 1720, 1870
BsmFI GGGAC 1 cut(s) 1896
BsmI GAATGC 5 cut(s) 58, 791, 1117, 1299, 2074
BsoBI CYCGRG 1 cut(s) 755
Bsp1286I GDGCHC 3 cut(s) 168, 756, 2221
Bsp68I TCGCGA 1 cut(s) 1678
BspACI CCGC 5 cut(s) 11, 55, 789, 901, 1296
BspCNI CTCAG 3 cut(s) 450, 742, 1374
BspFNI CGCG 4 cut(s) 350, 901, 1442, 1678
BspLI GGNNCC 5 cut(s) 47, 1288, 1911, 1912, 1922
BspMAI CTGCAG 2 cut(s) 1059, 1177
BspMI ACCTGC 1 cut(s) 406
BspPI GGATC 7 cut(s) 912, 1027, 1518, 1889, 1915, 1928, 1984
BspT107I GGYRCC 2 cut(s) 45, 1286
BsrDI GCAATG 2 cut(s) 535, 593
BsrI ACTGG 5 cut(s) 892, 1221, 1735, 1869, 2202
BssECI CCNNGG 6 cut(s) 343, 1229, 1291, 1435, 1528, 1769
BssSI CACGAG 1 cut(s) 1257
BssT1I CCWWGG 1 cut(s) 1435
Bst2BI CACGAG 1 cut(s) 1257
Bst2UI CCWGG 5 cut(s) 73, 237, 345, 1293, 1318
Bst4CI ACNGT 4 cut(s) 457, 1549, 1773, 1864
Bst6I CTCTTC 3 cut(s) 279, 927, 1994
BstDEI CTNAG 9 cut(s) 428, 437, 443, 566, 750, 847, 1361, 1520, 1658
BstDSI CCRYGG 1 cut(s) 1769
BstF5I GGATG 4 cut(s) 715, 982, 1187, 1278
BstFNI CGCG 4 cut(s) 350, 901, 1442, 1678
BstHHI GCGC 5 cut(s) 78, 350, 901, 1323, 1442
BstMAI GTCTC 7 cut(s) 628, 752, 1364, 1720, 1870, 1877, 2204
BstMWI GCNNNNNNNGC 3 cut(s) 52, 907, 1293
BstNI CCWGG 5 cut(s) 73, 237, 345, 1293, 1318
BstSCI CCNGG 5 cut(s) 71, 235, 343, 1291, 1316
BstSFI CTRYAG 4 cut(s) 1055, 1173, 1791, 2012
BstUI CGCG 4 cut(s) 350, 901, 1442, 1678
BstV1I GCAGC 7 cut(s) 904, 1127, 1187, 1413, 1571, 1881, 2084
BstV2I GAAGAC 2 cut(s) 97, 1342
BstX2I RGATCY 6 cut(s) 603, 850, 904, 1523, 1881, 1920
BstYI RGATCY 6 cut(s) 603, 850, 904, 1523, 1881, 1920
BtgI CCRYGG 1 cut(s) 1769
BtgZI GCGATG 1 cut(s) 1693
BtsCI GGATG 4 cut(s) 715, 982, 1187, 1278
BtsI GCAGTG 1 cut(s) 1064
BtsIMutI CAGTG 1 cut(s) 1064
BtuMI TCGCGA 1 cut(s) 1678
BveI ACCTGC 1 cut(s) 406
CaiI CAGNNNCTG 1 cut(s) 1875
CfoI GCGC 5 cut(s) 78, 350, 901, 1323, 1442
Cfr13I GGNCC 1 cut(s) 1910
Csp6I GTAC 5 cut(s) 357, 523, 725, 1306, 1449
CspCI CAANNNNNGTGG 2 cut(s) 663, 698
CviAII CATG 6 cut(s) 323, 329, 989, 1031, 1946, 1988
CviQI GTAC 5 cut(s) 357, 523, 725, 1306, 1449
DdeI CTNAG 9 cut(s) 428, 437, 443, 566, 750, 847, 1361, 1520, 1658
DraI TTTAAA 1 cut(s) 195
Eam1104I CTCTTC 3 cut(s) 279, 927, 1994
EarI CTCTTC 3 cut(s) 279, 927, 1994
Ecl136II GAGCTC 2 cut(s) 166, 754
Eco130I CCWWGG 1 cut(s) 1435
Eco24I GRGCYC 2 cut(s) 168, 756
Eco47I GGWCC 1 cut(s) 1910
Eco53kI GAGCTC 2 cut(s) 166, 754
Eco57I CTGAAG 5 cut(s) 596, 720, 943, 1336, 1688
Eco88I CYCGRG 1 cut(s) 755
EcoICRI GAGCTC 2 cut(s) 166, 754
EcoO109I RGGNCCY 1 cut(s) 1910
EcoRI GAATTC 2 cut(s) 86, 1331
EcoRII CCWGG 5 cut(s) 71, 235, 343, 1291, 1316
EcoT14I CCWWGG 1 cut(s) 1435
EcoT22I ATGCAT 2 cut(s) 717, 1809
EcoT38I GRGCYC 2 cut(s) 168, 756
ErhI CCWWGG 1 cut(s) 1435
Esp3I CGTCTC 3 cut(s) 628, 1720, 1870
FaeI CATG 6 cut(s) 326, 332, 992, 1034, 1949, 1991
FaqI GGGAC 1 cut(s) 1896
FatI CATG 6 cut(s) 322, 328, 988, 1030, 1945, 1987
FauI CCCGC 1 cut(s) 894
FbaI TGATCA 5 cut(s) 460, 883, 1033, 1552, 1990
FblI GTMKAC 1 cut(s) 1797
Fnu4HI GCNGC 9 cut(s) 56, 918, 1116, 1176, 1297, 1427, 1585, 1895, 2073
FokI GGATG 4 cut(s) 702, 969, 1194, 1285
FriOI GRGCYC 2 cut(s) 168, 756
Fsp4HI GCNGC 9 cut(s) 56, 918, 1116, 1176, 1297, 1427, 1585, 1895, 2073
FspBI CTAG 4 cut(s) 21, 1145, 1581, 2214
GlaI GCGC 5 cut(s) 77, 349, 900, 1322, 1441
GluI GCNGC 9 cut(s) 56, 918, 1116, 1176, 1297, 1427, 1585, 1895, 2073
GsuI CTGGAG 5 cut(s) 875, 1238, 1752, 1852, 2219
HapII CCGG 1 cut(s) 2102
HhaI GCGC 5 cut(s) 78, 350, 901, 1323, 1442
Hin1II CATG 6 cut(s) 326, 332, 992, 1034, 1949, 1991
Hin6I GCGC 5 cut(s) 76, 348, 899, 1321, 1440
HinP1I GCGC 5 cut(s) 76, 348, 899, 1321, 1440
HincII GTYRAC 1 cut(s) 1798
HindII GTYRAC 1 cut(s) 1798
HindIII AAGCTT 4 cut(s) 508, 1121, 1600, 2078
HinfI GANTC 9 cut(s) 188, 279, 289, 760, 965, 1102, 1129, 1247, 2086
HpaII CCGG 1 cut(s) 2102
HphI GGTGA 9 cut(s) 61, 188, 569, 1147, 1306, 1391, 1661, 1732, 2104
Hpy166II GTNNAC 3 cut(s) 1026, 1798, 1983
Hpy8I GTNNAC 3 cut(s) 1026, 1798, 1983
Hpy99I CGWCG 3 cut(s) 39, 1802, 2151
HpyAV CCTTC 6 cut(s) 145, 967, 1165, 1503, 1680, 1924
HpyCH4III ACNGT 4 cut(s) 457, 1549, 1773, 1864
HpyCH4IV ACGT 3 cut(s) 374, 1308, 1466
HpyF10VI GCNNNNNNNGC 3 cut(s) 52, 907, 1293
HpyF3I CTNAG 9 cut(s) 428, 437, 443, 566, 750, 847, 1361, 1520, 1658
HpySE526I ACGT 3 cut(s) 374, 1308, 1466
Hsp92II CATG 6 cut(s) 326, 332, 992, 1034, 1949, 1991
HspAI GCGC 5 cut(s) 76, 348, 899, 1321, 1440
KflI GGGWCCC 1 cut(s) 1910
Ksp22I TGATCA 5 cut(s) 460, 883, 1033, 1552, 1990
LmnI GCTCC 4 cut(s) 163, 406, 1219, 2200
Lsp1109I GCAGC 7 cut(s) 904, 1127, 1187, 1413, 1571, 1881, 2084
LweI GCATC 5 cut(s) 702, 724, 1670, 1794, 1816
MaeI CTAG 4 cut(s) 21, 1145, 1581, 2214
MaeII ACGT 3 cut(s) 374, 1308, 1466
MaeIII GTNAC 5 cut(s) 451, 694, 1543, 1756, 1786
MboII GAAGA 6 cut(s) 97, 296, 944, 1342, 2011, 2077
MfeI CAATTG 3 cut(s) 267, 1072, 2029
MflI RGATCY 6 cut(s) 603, 850, 904, 1523, 1881, 1920
MhlI GDGCHC 3 cut(s) 168, 756, 2221
MlyI GAGTC 4 cut(s) 182, 288, 754, 1256
MmeI TCCRAC 4 cut(s) 282, 609, 1222, 1701
Mph1103I ATGCAT 2 cut(s) 717, 1809
MroXI GAANNNNTTC 2 cut(s) 104, 288
MseI TTAA 9 cut(s) 194, 227, 420, 657, 1140, 1512, 1833, 2007, 2097
MslI CAYNNNNRTG 4 cut(s) 327, 864, 987, 1944
MspA1I CMGCKG 1 cut(s) 2017
MspI CCGG 1 cut(s) 2102
MspR9I CCNGG 5 cut(s) 73, 237, 345, 1293, 1318
MunI CAATTG 3 cut(s) 267, 1072, 2029
Mva1269I GAATGC 5 cut(s) 58, 791, 1117, 1299, 2074
MvaI CCWGG 5 cut(s) 73, 237, 345, 1293, 1318
MvnI CGCG 4 cut(s) 350, 901, 1442, 1678
MwoI GCNNNNNNNGC 3 cut(s) 52, 907, 1293
NlaIII CATG 6 cut(s) 326, 332, 992, 1034, 1949, 1991
NlaIV GGNNCC 5 cut(s) 47, 1288, 1911, 1912, 1922
NmeAIII GCCGAG 1 cut(s) 1254
NruI TCGCGA 1 cut(s) 1678
NsiI ATGCAT 2 cut(s) 717, 1809
PaeR7I CTCGAG 1 cut(s) 755
PctI GAATGC 5 cut(s) 58, 791, 1117, 1299, 2074
PdmI GAANNNNTTC 2 cut(s) 104, 288
PfeI GAWTC 5 cut(s) 289, 965, 1102, 1129, 2086
PkrI GCNGC 9 cut(s) 57, 919, 1117, 1177, 1298, 1428, 1586, 1896, 2074
PleI GAGTC 4 cut(s) 182, 287, 754, 1255
PpsI GAGTC 4 cut(s) 182, 287, 754, 1255
PpuMI RGGWCCY 1 cut(s) 1910
PshBI ATTAAT 3 cut(s) 657, 1140, 2097
Psp124BI GAGCTC 2 cut(s) 168, 756
Psp5II RGGWCCY 1 cut(s) 1910
Psp6I CCWGG 5 cut(s) 71, 235, 343, 1291, 1316
PspGI CCWGG 5 cut(s) 71, 235, 343, 1291, 1316
PspN4I GGNNCC 5 cut(s) 47, 1288, 1911, 1912, 1922
PspPI GGNCC 1 cut(s) 1910
PspPPI RGGWCCY 1 cut(s) 1910
PstI CTGCAG 2 cut(s) 1059, 1177
PstNI CAGNNNCTG 1 cut(s) 1875
PsuI RGATCY 6 cut(s) 603, 850, 904, 1523, 1881, 1920
PvuII CAGCTG 1 cut(s) 2017
RruI TCGCGA 1 cut(s) 1678
RsaI GTAC 5 cut(s) 358, 524, 726, 1307, 1450
RsaNI GTAC 5 cut(s) 357, 523, 725, 1306, 1449
RseI CAYNNNNRTG 4 cut(s) 327, 864, 987, 1944
SacI GAGCTC 2 cut(s) 168, 756
SalI GTCGAC 1 cut(s) 1796
SaqAI TTAA 9 cut(s) 194, 227, 420, 657, 1140, 1512, 1833, 2007, 2097
SatI GCNGC 9 cut(s) 56, 918, 1116, 1176, 1297, 1427, 1585, 1895, 2073
Sau96I GGNCC 1 cut(s) 1910
ScaI AGTACT 4 cut(s) 358, 524, 726, 1450
SchI GAGTC 4 cut(s) 182, 288, 754, 1256
ScrFI CCNGG 5 cut(s) 73, 237, 345, 1293, 1318
SduI GDGCHC 3 cut(s) 168, 756, 2221
SfaNI GCATC 5 cut(s) 702, 724, 1670, 1794, 1816
SfcI CTRYAG 4 cut(s) 1055, 1173, 1791, 2012
Sfr274I CTCGAG 1 cut(s) 755
SinI GGWCC 1 cut(s) 1910
SlaI CTCGAG 1 cut(s) 755
SmiMI CAYNNNNRTG 4 cut(s) 327, 864, 987, 1944
SmlI CTYRAG 6 cut(s) 755, 911, 1124, 1818, 1888, 2081
SmoI CTYRAG 6 cut(s) 755, 911, 1124, 1818, 1888, 2081
SpeI ACTAGT 1 cut(s) 2213
SsiI CCGC 5 cut(s) 11, 55, 789, 901, 1296
SspI AATATT 1 cut(s) 1642
SspMI CTAG 4 cut(s) 21, 1145, 1581, 2214
SstI GAGCTC 2 cut(s) 168, 756
StyD4I CCNGG 5 cut(s) 71, 235, 343, 1291, 1316
StyI CCWWGG 1 cut(s) 1435
TaaI ACNGT 4 cut(s) 457, 1549, 1773, 1864
TaiI ACGT 3 cut(s) 377, 1311, 1469
TaqII GACCGA 2 cut(s) 133, 1520
TatI WGTACW 4 cut(s) 356, 522, 724, 1448
TauI GCSGC 2 cut(s) 58, 1299
TfiI GAWTC 5 cut(s) 289, 965, 1102, 1129, 2086
Tru1I TTAA 9 cut(s) 194, 227, 420, 657, 1140, 1512, 1833, 2007, 2097
Tru9I TTAA 9 cut(s) 194, 227, 420, 657, 1140, 1512, 1833, 2007, 2097
TscAI CASTG 1 cut(s) 1064
TseI GCWGC 7 cut(s) 917, 1115, 1175, 1426, 1584, 1894, 2072
TspDTI ATGAA 9 cut(s) 339, 882, 928, 987, 1005, 1289, 1412, 1962, 2148
TspRI CASTG 1 cut(s) 1064
VpaK11BI GGWCC 1 cut(s) 1910
VspI ATTAAT 3 cut(s) 657, 1140, 2097
XapI RAATTY 4 cut(s) 86, 465, 1168, 1331
XhoI CTCGAG 1 cut(s) 755
XmiI GTMKAC 1 cut(s) 1797
XmnI GAANNNNTTC 2 cut(s) 104, 288
XspI CTAG 4 cut(s) 21, 1145, 1581, 2214
ZrmI AGTACT 4 cut(s) 358, 524, 726, 1450
Zsp2I ATGCAT 2 cut(s) 717, 1809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.