Rmu_sc0004888.1_g000041

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004888.1
OG0000084
Physical Location & Seq
Forward (+)
212811 .. 214671
1861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004888.1_g000041.1.cds

Sequence Viewer

Length: 1428 bp
atggatggatcgtatgaaccttcaatatctgatattggtttggtgtcccaaaattcgataaatggaagtgactgtaatgaaatgcaatataagggagttcggtatgataagttgtctacagaagatcttaaagggcaggagtttggacttgggctccgaattccggtctgggttttccgacccgtcattgctcgggtcagcatggatggatcatatgaaccttcaatatatgatattggtttggtgtcccaaagtttagtaaatggaagtgactgtaatgaaatgcaatataagggagttcggtatgataagttgtctacagaagatcttaaagggcaggagtttaagactgtggaggaagctgagtccttttacaatgcttctgcaaaggctatgggttttgatgttagaaacgactacaagagattaagtatacacataacaaggagagtcacttcattgcggttggtttgttctgctcaagggaaaagaagagaaaagtacataagtaacgagaaaagacttcgcaagccaaagaaagaaacaagattcaattgtccatgcttgttcaaagtaaggtaccgttcgaatattaatgcctatattgttgatgatttcataacgaaccactcacatcagcttgcacaagcacatgagtcgcatcttcttcgatcacacagatcagttgaagatcatcatttagcactggccacatctatgcagagagtgtctgttaagccttgtcatacatatgaatacattgttgataaatcaggaggttttaagaatgtcgggtttattatgaaggacttgtataacaagttagattcaagacgccgagaaattttacttgagggtgatgcagaagctgcacttgcatatatgagaggcaaagttgccacagactcgcatttctactgcaagtttagcatagatgaagataacaggttggtgaatatgttttggagagactctaattctctggtggattatactttttttggagatgtcttggtgtttgatagtacctacaaaaccaatccttatgagaagccgttagtgttgtttgttggttcaaacaatcatttatcgaccatagtttttggttttgcattactcatggatgaaacgattgagacttacacatgggttttggagacctttatatcatctatgaataacaaaaggcctgttgctgttttgactgaaggggatgaagcaatgcgaagggctattgaagtggtactccctggttgtcctcatcatttgtgtacgtggcacatagcaaataacgcccggaggcacctgcgtaagaataatgtcttttctgaatttagacgttgtatgtgggatgaagtcactccagatggttttgaaaaacgctggaatgctatggttaacacacatggtctccacaataaggattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

475

Amino Acids

54.85

Weight (kDa)

7.96

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1314
Acc36I ACCTGC 1 cut(s) 1314
Acc65I GGTACC 1 cut(s) 579
AccB1I GGYRCC 2 cut(s) 579, 1302
AccI GTMKAC 3 cut(s) 116, 317, 433
AciI CCGC 1 cut(s) 463
AclWI GGATC 2 cut(s) 16, 217
AcoI YGGCCR 1 cut(s) 708
AcsI RAATTY 4 cut(s) 52, 159, 843, 1331
AcuI CTGAAG 1 cut(s) 1227
AcyI GRCGYC 1 cut(s) 835
AfaI GTAC 5 cut(s) 503, 581, 1027, 1245, 1273
AfiI CCNNNNNNNGG 2 cut(s) 163, 1420
AgsI TTSAA 9 cut(s) 24, 225, 553, 571, 689, 831, 1077, 1238, 1376
AjnI CCWGG 1 cut(s) 1249
AluBI AGCT 3 cut(s) 362, 640, 869
AluI AGCT 3 cut(s) 362, 640, 869
Alw26I GTCTC 4 cut(s) 963, 1130, 1151, 1415
AlwI GGATC 2 cut(s) 16, 217
AlwNI CAGNNNCTG 1 cut(s) 869
Ama87I CYCGRG 1 cut(s) 192
AoxI GGCC 2 cut(s) 708, 1187
ApeKI GCWGC 1 cut(s) 869
ApoI RAATTY 4 cut(s) 52, 159, 843, 1331
AseI ATTAAT 1 cut(s) 594
Asp718I GGTACC 1 cut(s) 579
AsuC2I CCSGG 1 cut(s) 1297
AsuHPI GGTGA 2 cut(s) 869, 964
AsuII TTCGAA 1 cut(s) 587
AvaI CYCGRG 1 cut(s) 192
BalI TGGCCA 1 cut(s) 710
BanI GGYRCC 2 cut(s) 579, 1302
BanII GRGCYC 1 cut(s) 156
BbvI GCAGC 1 cut(s) 856
BccI CCATC 2 cut(s) 200, 1361
BceAI ACGGC 1 cut(s) 1039
BcgI CGANNNNNNTGC 4 cut(s) 639, 650, 673, 684
BciT130I CCWGG 1 cut(s) 1251
BcnI CCSGG 1 cut(s) 1297
BcoDI GTCTC 4 cut(s) 963, 1130, 1151, 1415
BfmI CTRYAG 2 cut(s) 117, 318
BfuAI ACCTGC 1 cut(s) 1314
BglII AGATCT 2 cut(s) 124, 325
BisI GCNGC 1 cut(s) 870
BlsI GCNGC 1 cut(s) 871
Bme1390I CCNGG 2 cut(s) 1251, 1297
BmeT110I CYCGRG 1 cut(s) 192
BmiI GGNNCC 3 cut(s) 155, 581, 1304
BmrFI CCNGG 2 cut(s) 1251, 1297
BmsI GCATC 2 cut(s) 670, 850
BpmI CTGGAG 1 cut(s) 1347
Bpu14I TTCGAA 1 cut(s) 587
BpuEI CTTGAG 2 cut(s) 465, 872
BpuMI CCSGG 1 cut(s) 1297
BsaAI YACGTR 1 cut(s) 1275
BsaHI GRCGYC 1 cut(s) 835
BsaI GGTCTC 2 cut(s) 1151, 1415
BsaJI CCNNGG 1 cut(s) 1249
BsaWI WCCGGW 1 cut(s) 163
BsaXI ACNNNNNCTCC 4 cut(s) 138, 168, 1395, 1425
Bsc4I CCNNNNNNNGG 2 cut(s) 163, 1420
Bse1I ACTGG 1 cut(s) 711
Bse3DI GCAATG 3 cut(s) 186, 458, 1227
BseBI CCWGG 1 cut(s) 1251
BseDI CCNNGG 1 cut(s) 1249
BseGI GGATG 5 cut(s) 10, 211, 1129, 1219, 1357
BseLI CCNNNNNNNGG 2 cut(s) 163, 1420
BseMI GCAATG 3 cut(s) 186, 458, 1227
BseMII CTCAG 1 cut(s) 354
BseNI ACTGG 1 cut(s) 711
BseXI GCAGC 1 cut(s) 856
BsgI GTGCAG 1 cut(s) 855
BshFI GGCC 2 cut(s) 710, 1189
BshNI GGYRCC 2 cut(s) 579, 1302
BsiHKCI CYCGRG 1 cut(s) 192
BsiSI CCGG 2 cut(s) 164, 1297
BslFI GGGAC 2 cut(s) 31, 232
BslI CCNNNNNNNGG 2 cut(s) 163, 1420
BsmAI GTCTC 4 cut(s) 963, 1130, 1151, 1415
BsmFI GGGAC 2 cut(s) 31, 232
BsmI GAATGC 1 cut(s) 1393
BsnI GGCC 2 cut(s) 710, 1189
Bso31I GGTCTC 2 cut(s) 1151, 1415
BsoBI CYCGRG 1 cut(s) 192
Bsp119I TTCGAA 1 cut(s) 587
Bsp1286I GDGCHC 1 cut(s) 156
Bsp143I GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
BspACI CCGC 1 cut(s) 463
BspANI GGCC 2 cut(s) 710, 1189
BspCNI CTCAG 1 cut(s) 355
BspLI GGNNCC 3 cut(s) 155, 581, 1304
BspMI ACCTGC 1 cut(s) 1314
BspPI GGATC 2 cut(s) 16, 217
BspT104I TTCGAA 1 cut(s) 587
BspT107I GGYRCC 2 cut(s) 579, 1302
BspTNI GGTCTC 2 cut(s) 1151, 1415
BsrDI GCAATG 3 cut(s) 186, 458, 1227
BsrI ACTGG 1 cut(s) 711
BssECI CCNNGG 1 cut(s) 1249
BssMI GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
BssNAI GTATAC 1 cut(s) 434
BssNI GRCGYC 1 cut(s) 835
Bst1107I GTATAC 1 cut(s) 434
Bst2UI CCWGG 1 cut(s) 1251
Bst4CI ACNGT 4 cut(s) 74, 275, 352, 584
Bst6I CTCTTC 1 cut(s) 487
BstACI GRCGYC 1 cut(s) 835
BstAPI GCANNNNNTGC 1 cut(s) 869
BstBAI YACGTR 1 cut(s) 1275
BstBI TTCGAA 1 cut(s) 587
BstC8I GCNNGC 2 cut(s) 530, 642
BstDEI CTNAG 1 cut(s) 363
BstF5I GGATG 5 cut(s) 10, 211, 1129, 1219, 1357
BstKTI GATC 7 cut(s) 11, 127, 212, 328, 674, 683, 694
BstMAI GTCTC 4 cut(s) 963, 1130, 1151, 1415
BstMBI GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
BstMWI GCNNNNNNNGC 4 cut(s) 869, 875, 927, 1292
BstNI CCWGG 1 cut(s) 1251
BstSCI CCNGG 2 cut(s) 1249, 1295
BstSFI CTRYAG 2 cut(s) 117, 318
BstV1I GCAGC 1 cut(s) 856
BstX2I RGATCY 2 cut(s) 124, 325
BstYI RGATCY 2 cut(s) 124, 325
BstZ17I GTATAC 1 cut(s) 434
BsuRI GGCC 2 cut(s) 710, 1189
BtsCI GGATG 5 cut(s) 10, 211, 1129, 1219, 1357
BtsIMutI CAGTG 1 cut(s) 704
BveI ACCTGC 1 cut(s) 1314
Cac8I GCNNGC 2 cut(s) 530, 642
CaiI CAGNNNCTG 1 cut(s) 869
CseI GACGC 1 cut(s) 843
Csp6I GTAC 5 cut(s) 502, 580, 1026, 1244, 1272
CviAII CATG 6 cut(s) 202, 561, 653, 1120, 1146, 1406
CviQI GTAC 5 cut(s) 502, 580, 1026, 1244, 1272
DdeI CTNAG 1 cut(s) 363
DpnI GATC 7 cut(s) 10, 126, 211, 327, 673, 682, 693
DpnII GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
EaeI YGGCCR 1 cut(s) 708
Eam1104I CTCTTC 1 cut(s) 487
EarI CTCTTC 1 cut(s) 487
Eco147I AGGCCT 1 cut(s) 1189
Eco24I GRGCYC 1 cut(s) 156
Eco31I GGTCTC 2 cut(s) 1151, 1415
Eco57I CTGAAG 1 cut(s) 1227
Eco88I CYCGRG 1 cut(s) 192
EcoRI GAATTC 1 cut(s) 159
EcoRII CCWGG 1 cut(s) 1249
EcoT38I GRGCYC 1 cut(s) 156
FaeI CATG 6 cut(s) 205, 564, 656, 1123, 1149, 1409
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 2 cut(s) 31, 232
FatI CATG 6 cut(s) 201, 560, 652, 1119, 1145, 1405
FauNDI CATATG 2 cut(s) 214, 751
FblI GTMKAC 3 cut(s) 116, 317, 433
Fnu4HI GCNGC 1 cut(s) 870
FokI GGATG 5 cut(s) 17, 218, 1136, 1226, 1364
FriOI GRGCYC 1 cut(s) 156
Fsp4HI GCNGC 1 cut(s) 870
GluI GCNGC 1 cut(s) 870
GsuI CTGGAG 1 cut(s) 1347
HaeIII GGCC 2 cut(s) 710, 1189
HapII CCGG 2 cut(s) 164, 1297
HgaI GACGC 1 cut(s) 843
Hin1I GRCGYC 1 cut(s) 835
Hin1II CATG 6 cut(s) 205, 564, 656, 1123, 1149, 1409
HincII GTYRAC 1 cut(s) 1399
HindII GTYRAC 1 cut(s) 1399
HinfI GANTC 7 cut(s) 365, 450, 549, 656, 827, 905, 971
HpaI GTTAAC 1 cut(s) 1399
HpaII CCGG 2 cut(s) 164, 1297
HphI GGTGA 2 cut(s) 869, 964
Hpy166II GTNNAC 5 cut(s) 117, 318, 434, 1272, 1399
Hpy188I TCNGA 4 cut(s) 31, 158, 179, 1330
Hpy188III TCNNGA 3 cut(s) 774, 831, 1364
Hpy8I GTNNAC 5 cut(s) 117, 318, 434, 1272, 1399
HpyAV CCTTC 5 cut(s) 30, 231, 799, 1202, 1221
HpyCH4III ACNGT 4 cut(s) 74, 275, 352, 584
HpyCH4IV ACGT 2 cut(s) 1274, 1339
HpyF10VI GCNNNNNNNGC 4 cut(s) 869, 875, 927, 1292
HpyF3I CTNAG 1 cut(s) 363
HpySE526I ACGT 2 cut(s) 1274, 1339
Hsp92I GRCGYC 1 cut(s) 835
Hsp92II CATG 6 cut(s) 205, 564, 656, 1123, 1149, 1409
KpnI GGTACC 1 cut(s) 583
KspAI GTTAAC 1 cut(s) 1399
Kzo9I GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
LmnI GCTCC 1 cut(s) 159
Lsp1109I GCAGC 1 cut(s) 856
LweI GCATC 2 cut(s) 670, 850
MaeII ACGT 2 cut(s) 1274, 1339
MaeIII GTNAC 5 cut(s) 68, 269, 451, 509, 1357
MalI GATC 7 cut(s) 10, 126, 211, 327, 673, 682, 693
MboI GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
MboII GAAGA 7 cut(s) 134, 335, 504, 656, 659, 701, 950
MfeI CAATTG 1 cut(s) 553
MflI RGATCY 2 cut(s) 124, 325
MhlI GDGCHC 1 cut(s) 156
MlsI TGGCCA 1 cut(s) 710
MluCI AATT 6 cut(s) 52, 159, 553, 843, 976, 1331
MluNI TGGCCA 1 cut(s) 710
MlyI GAGTC 5 cut(s) 374, 459, 665, 899, 965
MmeI TCCRAC 1 cut(s) 202
MnlI CCTC 6 cut(s) 349, 770, 847, 881, 1269, 1293
Mox20I TGGCCA 1 cut(s) 710
MscI TGGCCA 1 cut(s) 710
MseI TTAA 8 cut(s) 129, 330, 345, 428, 594, 735, 783, 1398
MslI CAYNNNNRTG 2 cut(s) 716, 750
Msp20I TGGCCA 1 cut(s) 710
MspI CCGG 2 cut(s) 164, 1297
MspR9I CCNGG 2 cut(s) 1251, 1297
MunI CAATTG 1 cut(s) 553
Mva1269I GAATGC 1 cut(s) 1393
MvaI CCWGG 1 cut(s) 1251
MwoI GCNNNNNNNGC 4 cut(s) 869, 875, 927, 1292
NciI CCSGG 1 cut(s) 1297
NdeI CATATG 2 cut(s) 214, 751
NdeII GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
NlaIII CATG 6 cut(s) 205, 564, 656, 1123, 1149, 1409
NlaIV GGNNCC 3 cut(s) 155, 581, 1304
NmeAIII GCCGAG 1 cut(s) 863
NmuCI GTSAC 4 cut(s) 68, 269, 451, 1357
NspV TTCGAA 1 cut(s) 587
PaqCI CACCTGC 1 cut(s) 1314
PceI AGGCCT 1 cut(s) 1189
PctI GAATGC 1 cut(s) 1393
PfeI GAWTC 2 cut(s) 549, 827
PkrI GCNGC 1 cut(s) 871
PleI GAGTC 5 cut(s) 373, 458, 664, 899, 965
PpsI GAGTC 5 cut(s) 373, 458, 664, 899, 965
Ppu21I YACGTR 1 cut(s) 1275
PshBI ATTAAT 1 cut(s) 594
Psp6I CCWGG 1 cut(s) 1249
PspGI CCWGG 1 cut(s) 1249
PspN4I GGNNCC 3 cut(s) 155, 581, 1304
PstNI CAGNNNCTG 1 cut(s) 869
PsuI RGATCY 2 cut(s) 124, 325
RsaI GTAC 5 cut(s) 503, 581, 1027, 1245, 1273
RsaNI GTAC 5 cut(s) 502, 580, 1026, 1244, 1272
RseI CAYNNNNRTG 2 cut(s) 716, 750
SaqAI TTAA 8 cut(s) 129, 330, 345, 428, 594, 735, 783, 1398
SatI GCNGC 1 cut(s) 870
Sau3AI GATC 7 cut(s) 8, 124, 209, 325, 671, 680, 691
SchI GAGTC 5 cut(s) 374, 459, 665, 899, 965
ScrFI CCNGG 2 cut(s) 1251, 1297
SduI GDGCHC 1 cut(s) 156
SfaNI GCATC 2 cut(s) 670, 850
SfcI CTRYAG 2 cut(s) 117, 318
SfuI TTCGAA 1 cut(s) 587
SmiMI CAYNNNNRTG 2 cut(s) 716, 750
SmlI CTYRAG 2 cut(s) 480, 851
SmoI CTYRAG 2 cut(s) 480, 851
Sse9I AATT 6 cut(s) 52, 159, 553, 843, 976, 1331
SseBI AGGCCT 1 cut(s) 1189
SsiI CCGC 1 cut(s) 463
SspI AATATT 1 cut(s) 592
StuI AGGCCT 1 cut(s) 1189
StyD4I CCNGG 2 cut(s) 1249, 1295
TaaI ACNGT 4 cut(s) 74, 275, 352, 584
TaiI ACGT 2 cut(s) 1277, 1342
TaqI TCGA 4 cut(s) 56, 587, 670, 1091
TasI AATT 6 cut(s) 52, 159, 553, 843, 976, 1331
TatI WGTACW 1 cut(s) 501
TfiI GAWTC 2 cut(s) 549, 827
Tru1I TTAA 8 cut(s) 129, 330, 345, 428, 594, 735, 783, 1398
Tru9I TTAA 8 cut(s) 129, 330, 345, 428, 594, 735, 783, 1398
TscAI CASTG 1 cut(s) 711
TseFI GTSAC 4 cut(s) 68, 269, 451, 1357
TseI GCWGC 1 cut(s) 869
Tsp45I GTSAC 4 cut(s) 68, 269, 451, 1357
TspRI CASTG 1 cut(s) 711
VspI ATTAAT 1 cut(s) 594
XapI RAATTY 4 cut(s) 52, 159, 843, 1331
XmiI GTMKAC 3 cut(s) 116, 317, 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.