Rh3BG235200

MULE transposase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000084
Physical Location & Seq
Reverse (-)
22028930 .. 22033700
4771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG235200.1

Sequence Viewer

Length: 810 bp
ATGTACGGTTCGCTCTCTCAATCTGTCTCACCCTCACAGCCTCACTTCGCCGTCGTCTCTGTTCGTCACCGTGCCTCCGGCGTCGGGTCTCCGTGCGCGGCGATCCTCCACTCCACTGCTCCTCCAGTCTTCCAGCCCACGGGTTCTCCACATCGAGTTGGAGGACTGATAACTTCAAGGATTATGCATCTGAATTCATGTCGTGTGTACATTACGTCTAGTTATAACAATGATGAAGAGAAAGAGTGCACAACTACTTATTACCATCGGGAAAGTGATCCTCGAGTAGTATGCTCTTGCAAACTTTATGAATGTGAAGGCATCCCATGTTCTCATTTATTTAATGTAATGAAGCATGAGCGCATGAGGGAGATACCTTTGTCCTTAGTATTAAAGCGGTGGACAAAGCAAGCAAAATCTGAAGTTCACTCCACAGTTCCCAAGGAAAATATGCCTAGTGAAGCTGTACGATTGGCCAGGGACATAAACATCCTTACAAAGGAGGGTACCGACATTTTGAAGAAAGAACTCAGCAGATTGGAGCCGATACTTGGAGATGTTTTGAAGCAACAAAAAGATGTAGGTGATAGTCCAGATCCATGTAATAACATTGTAAGAGATCCTATCAGGGTAAGGAGCAAGGGCATGCAAGGAAGCAATGAACCAAAAACAAAGCCAAAATGTCGTTTATGCAGAAGCTATGGACACAATAAAACTACATGCCCACAGAAGAATAGGGTACGTGGCAGAGTTAGAGTTGTGGCAAAAAATAAACCCAAACTTCGACGGCTCAGTGATATTGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

269

Amino Acids

30.3

Weight (kDa)

9.61

Isoelectric Point (pI)

62.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 225
Acc65I GGTACC 1 cut(s) 506
AccB1I GGYRCC 1 cut(s) 506
AccII CGCG 1 cut(s) 98
AciI CCGC 2 cut(s) 98, 397
AclWI GGATC 4 cut(s) 97, 272, 590, 614
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 1 cut(s) 193
AcuI CTGAAG 1 cut(s) 441
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 5 cut(s) 5, 209, 468, 508, 741
AfiI CCNNNNNNNGG 4 cut(s) 84, 139, 499, 551
AgsI TTSAA 4 cut(s) 177, 520, 565, 803
AjnI CCWGG 1 cut(s) 476
AluBI AGCT 2 cut(s) 464, 699
AluI AGCT 2 cut(s) 464, 699
Alw21I GWGCWC 1 cut(s) 251
Alw26I GTCTC 3 cut(s) 31, 61, 93
Alw44I GTGCAC 1 cut(s) 247
AlwI GGATC 4 cut(s) 97, 272, 590, 614
Ama87I CYCGRG 1 cut(s) 282
AoxI GGCC 1 cut(s) 474
ApaLI GTGCAC 1 cut(s) 247
ApoI RAATTY 1 cut(s) 193
Asp718I GGTACC 1 cut(s) 506
AspLEI GCGC 2 cut(s) 98, 363
AsuHPI GGTGA 3 cut(s) 21, 59, 596
AvaI CYCGRG 1 cut(s) 282
BaeGI GKGCMC 1 cut(s) 251
BaeI ACNNNNGTAYC 2 cut(s) 365, 398
BalI TGGCCA 1 cut(s) 476
BanI GGYRCC 1 cut(s) 506
BbsI GAAGAC 1 cut(s) 121
Bbv12I GWGCWC 1 cut(s) 251
BccI CCATC 1 cut(s) 273
BceAI ACGGC 2 cut(s) 35, 803
BcgI CGANNNNNNTGC 2 cut(s) 273, 307
BciT130I CCWGG 1 cut(s) 478
BcoDI GTCTC 3 cut(s) 31, 61, 93
BfaI CTAG 2 cut(s) 219, 456
BisI GCNGC 1 cut(s) 99
BlsI GCNGC 1 cut(s) 100
Bme1390I CCNGG 1 cut(s) 478
BmeT110I CYCGRG 1 cut(s) 282
BmiI GGNNCC 2 cut(s) 508, 543
BmrFI CCNGG 1 cut(s) 478
BmsI GCATC 2 cut(s) 196, 330
BpiI GAAGAC 1 cut(s) 121
BpmI CTGGAG 1 cut(s) 108
BsaAI YACGTR 1 cut(s) 743
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 93
BsaJI CCNNGG 3 cut(s) 138, 441, 477
BsaXI ACNNNNNCTCC 6 cut(s) 59, 89, 106, 130, 136, 160
Bsc4I CCNNNNNNNGG 4 cut(s) 84, 139, 499, 551
Bse1I ACTGG 1 cut(s) 125
Bse3DI GCAATG 1 cut(s) 664
BseBI CCWGG 1 cut(s) 478
BseDI CCNNGG 3 cut(s) 138, 441, 477
BseGI GGATG 2 cut(s) 321, 489
BseLI CCNNNNNNNGG 4 cut(s) 84, 139, 499, 551
BseMI GCAATG 1 cut(s) 664
BseMII CTCAG 2 cut(s) 544, 805
BseNI ACTGG 1 cut(s) 125
BseRI GAGGAG 1 cut(s) 111
BseSI GKGCMC 1 cut(s) 251
Bsh1236I CGCG 1 cut(s) 98
BshFI GGCC 1 cut(s) 476
BshNI GGYRCC 1 cut(s) 506
BsiHKAI GWGCWC 1 cut(s) 251
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 1 cut(s) 78
BslFI GGGAC 1 cut(s) 494
BslI CCNNNNNNNGG 4 cut(s) 84, 139, 499, 551
BsmAI GTCTC 3 cut(s) 31, 61, 93
BsmBI CGTCTC 1 cut(s) 61
BsmFI GGGAC 1 cut(s) 494
BsnI GGCC 1 cut(s) 476
Bso31I GGTCTC 1 cut(s) 93
BsoBI CYCGRG 1 cut(s) 282
Bsp1286I GDGCHC 1 cut(s) 251
Bsp1407I TGTACA 1 cut(s) 207
Bsp143I GATC 4 cut(s) 102, 277, 595, 619
BspACI CCGC 2 cut(s) 98, 397
BspANI GGCC 1 cut(s) 476
BspCNI CTCAG 2 cut(s) 543, 804
BspFNI CGCG 1 cut(s) 98
BspLI GGNNCC 2 cut(s) 508, 543
BspPI GGATC 4 cut(s) 97, 272, 590, 614
BspT107I GGYRCC 1 cut(s) 506
BspTNI GGTCTC 1 cut(s) 93
BsrDI GCAATG 1 cut(s) 664
BsrGI TGTACA 1 cut(s) 207
BsrI ACTGG 1 cut(s) 125
BssECI CCNNGG 3 cut(s) 138, 441, 477
BssMI GATC 4 cut(s) 102, 277, 595, 619
BssNI GRCGYC 1 cut(s) 81
BssT1I CCWWGG 1 cut(s) 441
Bst2UI CCWGG 1 cut(s) 478
Bst4CI ACNGT 3 cut(s) 8, 71, 436
Bst6I CTCTTC 1 cut(s) 231
BstACI GRCGYC 1 cut(s) 81
BstAUI TGTACA 1 cut(s) 207
BstBAI YACGTR 1 cut(s) 743
BstC8I GCNNGC 2 cut(s) 411, 647
BstDEI CTNAG 3 cut(s) 385, 530, 791
BstDSI CCRYGG 1 cut(s) 138
BstENI CCTNNNNNAGG 1 cut(s) 497
BstF5I GGATG 2 cut(s) 321, 489
BstFNI CGCG 1 cut(s) 98
BstHHI GCGC 2 cut(s) 98, 363
BstKTI GATC 4 cut(s) 105, 280, 598, 622
BstMAI GTCTC 3 cut(s) 31, 61, 93
BstMBI GATC 4 cut(s) 102, 277, 595, 619
BstNI CCWGG 1 cut(s) 478
BstNSI RCATGY 2 cut(s) 649, 723
BstSCI CCNGG 1 cut(s) 476
BstSLI GKGCMC 1 cut(s) 251
BstUI CGCG 1 cut(s) 98
BstV2I GAAGAC 1 cut(s) 121
BstX2I RGATCY 2 cut(s) 595, 619
BstYI RGATCY 2 cut(s) 595, 619
BsuRI GGCC 1 cut(s) 476
BtgI CCRYGG 1 cut(s) 138
BtsCI GGATG 2 cut(s) 321, 489
BtsI GCAGTG 1 cut(s) 114
BtsIMutI CAGTG 2 cut(s) 114, 799
Cac8I GCNNGC 2 cut(s) 411, 647
CfoI GCGC 2 cut(s) 98, 363
CseI GACGC 1 cut(s) 70
Csp6I GTAC 5 cut(s) 4, 208, 467, 507, 740
CviAII CATG 7 cut(s) 198, 327, 356, 364, 600, 646, 720
CviJI RGCY 8 cut(s) 40, 136, 464, 476, 544, 676, 699, 790
CviKI_1 RGCY 8 cut(s) 40, 136, 464, 476, 544, 676, 699, 790
CviQI GTAC 5 cut(s) 4, 208, 467, 507, 740
DdeI CTNAG 3 cut(s) 385, 530, 791
DpnI GATC 4 cut(s) 104, 279, 597, 621
DpnII GATC 4 cut(s) 102, 277, 595, 619
EaeI YGGCCR 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 231
EarI CTCTTC 1 cut(s) 231
Eco130I CCWWGG 1 cut(s) 441
Eco31I GGTCTC 1 cut(s) 93
Eco57I CTGAAG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 282
EcoNI CCTNNNNNAGG 1 cut(s) 497
EcoRI GAATTC 1 cut(s) 193
EcoRII CCWGG 1 cut(s) 476
EcoT14I CCWWGG 1 cut(s) 441
EcoT22I ATGCAT 1 cut(s) 189
ErhI CCWWGG 1 cut(s) 441
Esp3I CGTCTC 1 cut(s) 61
FaeI CATG 7 cut(s) 201, 330, 359, 367, 603, 649, 723
FaqI GGGAC 1 cut(s) 494
FatI CATG 7 cut(s) 197, 326, 355, 363, 599, 645, 719
Fnu4HI GCNGC 1 cut(s) 99
FokI GGATG 2 cut(s) 308, 476
Fsp4HI GCNGC 1 cut(s) 99
FspBI CTAG 2 cut(s) 219, 456
GlaI GCGC 2 cut(s) 97, 362
GluI GCNGC 1 cut(s) 99
GsuI CTGGAG 1 cut(s) 108
HaeIII GGCC 1 cut(s) 476
HapII CCGG 1 cut(s) 78
HgaI GACGC 1 cut(s) 70
HhaI GCGC 2 cut(s) 98, 363
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 7 cut(s) 201, 330, 359, 367, 603, 649, 723
Hin6I GCGC 2 cut(s) 96, 361
HinP1I GCGC 2 cut(s) 96, 361
HpaII CCGG 1 cut(s) 78
HphI GGTGA 3 cut(s) 21, 59, 596
Hpy166II GTNNAC 4 cut(s) 208, 249, 402, 427
Hpy188I TCNGA 2 cut(s) 192, 421
Hpy188III TCNNGA 2 cut(s) 269, 593
Hpy8I GTNNAC 4 cut(s) 208, 249, 402, 427
Hpy99I CGWCG 3 cut(s) 56, 86, 789
HpyAV CCTTC 1 cut(s) 311
HpyCH4III ACNGT 3 cut(s) 8, 71, 436
HpyCH4IV ACGT 2 cut(s) 215, 742
HpyCH4V TGCA 5 cut(s) 187, 249, 300, 649, 693
HpyF3I CTNAG 3 cut(s) 385, 530, 791
HpySE526I ACGT 2 cut(s) 215, 742
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 7 cut(s) 201, 330, 359, 367, 603, 649, 723
HspAI GCGC 2 cut(s) 96, 361
KpnI GGTACC 1 cut(s) 510
Kzo9I GATC 4 cut(s) 102, 277, 595, 619
LmnI GCTCC 3 cut(s) 124, 541, 636
LpnPI CCDG 7 cut(s) 91, 138, 146, 463, 490, 606, 613
LweI GCATC 2 cut(s) 196, 330
MaeI CTAG 2 cut(s) 219, 456
MaeII ACGT 2 cut(s) 215, 742
MaeIII GTNAC 1 cut(s) 65
MalI GATC 4 cut(s) 104, 279, 597, 621
MboI GATC 4 cut(s) 102, 277, 595, 619
MboII GAAGA 4 cut(s) 121, 248, 532, 742
MflI RGATCY 2 cut(s) 595, 619
MhlI GDGCHC 1 cut(s) 251
MlsI TGGCCA 1 cut(s) 476
MluCI AATT 1 cut(s) 193
MluNI TGGCCA 1 cut(s) 476
MmeI TCCRAC 1 cut(s) 139
MnlI CCTC 9 cut(s) 43, 51, 85, 116, 132, 155, 291, 360, 496
Mox20I TGGCCA 1 cut(s) 476
Mph1103I ATGCAT 1 cut(s) 189
MscI TGGCCA 1 cut(s) 476
MseI TTAA 2 cut(s) 342, 392
Msp20I TGGCCA 1 cut(s) 476
MspI CCGG 1 cut(s) 78
MspR9I CCNGG 1 cut(s) 478
MvaI CCWGG 1 cut(s) 478
MvnI CGCG 1 cut(s) 98
NdeII GATC 4 cut(s) 102, 277, 595, 619
NlaIII CATG 7 cut(s) 201, 330, 359, 367, 603, 649, 723
NlaIV GGNNCC 2 cut(s) 508, 543
NmuCI GTSAC 1 cut(s) 65
NsiI ATGCAT 1 cut(s) 189
NspI RCATGY 2 cut(s) 649, 723
PaeI GCATGC 1 cut(s) 649
PaeR7I CTCGAG 1 cut(s) 282
PkrI GCNGC 1 cut(s) 100
Ppu21I YACGTR 1 cut(s) 743
PsiI TTATAA 1 cut(s) 225
Psp6I CCWGG 1 cut(s) 476
PspGI CCWGG 1 cut(s) 476
PspN4I GGNNCC 2 cut(s) 508, 543
PspXI VCTCGAGB 1 cut(s) 282
PsuI RGATCY 2 cut(s) 595, 619
RsaI GTAC 5 cut(s) 5, 209, 468, 508, 741
RsaNI GTAC 5 cut(s) 4, 208, 467, 507, 740
SaqAI TTAA 2 cut(s) 342, 392
SatI GCNGC 1 cut(s) 99
Sau3AI GATC 4 cut(s) 102, 277, 595, 619
ScrFI CCNGG 1 cut(s) 478
SduI GDGCHC 1 cut(s) 251
SetI ASST 6 cut(s) 218, 379, 466, 586, 701, 745
SfaNI GCATC 2 cut(s) 196, 330
Sfr274I CTCGAG 1 cut(s) 282
SlaI CTCGAG 1 cut(s) 282
SmlI CTYRAG 1 cut(s) 282
SmoI CTYRAG 1 cut(s) 282
SphI GCATGC 1 cut(s) 649
Sse9I AATT 1 cut(s) 193
SsiI CCGC 2 cut(s) 98, 397
SspMI CTAG 2 cut(s) 219, 456
StyD4I CCNGG 1 cut(s) 476
StyI CCWWGG 1 cut(s) 441
TaaI ACNGT 3 cut(s) 8, 71, 436
TaiI ACGT 2 cut(s) 218, 745
TaqI TCGA 3 cut(s) 154, 283, 784
TasI AATT 1 cut(s) 193
TatI WGTACW 1 cut(s) 207
TauI GCSGC 1 cut(s) 101
Tru1I TTAA 2 cut(s) 342, 392
Tru9I TTAA 2 cut(s) 342, 392
TscAI CASTG 2 cut(s) 121, 799
TseFI GTSAC 1 cut(s) 65
Tsp45I GTSAC 1 cut(s) 65
TspDTI ATGAA 5 cut(s) 186, 249, 324, 365, 675
TspGWI ACGGA 1 cut(s) 81
TspRI CASTG 2 cut(s) 121, 799
VneI GTGCAC 1 cut(s) 247
XagI CCTNNNNNAGG 1 cut(s) 497
XapI RAATTY 1 cut(s) 193
XceI RCATGY 2 cut(s) 649, 723
XhoI CTCGAG 1 cut(s) 282
XspI CTAG 2 cut(s) 219, 456
Zsp2I ATGCAT 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.