Rmu_ssc0000171.1_g000030

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000171.1
OG0000084
Physical Location & Seq
Forward (+)
110877 .. 118022
7146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000171.1_g000030.1.cds

Sequence Viewer

Length: 2061 bp
atggaacctgcaaaaattgatttgaaaaacttggaatggagatttgtagaggacaaagcctacgagcagatcaacgcccaagtgccctctccctcttccggccatctgggaacgaacaacaggcaccggtcgacttctctactcctacccaacctccctacggtgacaactcatggcggcttggctggaaaacgacgcattgggtccttgaagtttcactgtagcagaagtggtcaacgccggtttcttccgattccggccgtctccgaccaccaaatagtcgtcgaaggttcggtttttgccaaggatcattttgcccctagccttgagccacgattttccatgtggaggaagaatcgaaggtttgaatttctgggtactattcataaatatgggtttactggtctccgaccaccaaatagtcgtcgaaggttcggacgatatattgagctaccacttgacgaaggaactcgtttgcgtggtcgccaaccagtaataatctcaggacctgccctggtatctctgtcaccaatccgggcgttgaccgaacgaggcgttagattctcaggacctgccctagtatctccgttcgactcgtctccacctccaggccactcccacagtgacaactcacagcatcttggccggaaaacgaagatccaaggtcgagaacaccacggtgtcgatttcggtcaacgcctcgttctccaaatttcggccaccataaacggccaagcttgtacaggacgtgggaggactcacacgaggaaactttggatagacggcaagcttagccgcatacttgctgtagctacggttgagggggagagtaaagattggataaatgggctgccggattacattctgtcatccgtactttcattgttaacagtaaaagatgcagcggagactagcattgtatctcgccagtggaggaacctttggaagacaaggcctcccaatcttgaattagacattgtaaatatttttgggtccgtgaatgctcctctcattgaaccatatcggtccatctttagtgttacatcttgtagtcgtcaattcaacagacagtgctatataaaacgagtgaatgaagttttggagctctactctggcaacaagctagactcattcaaagtggcattcttttttaatcgagaatttactgaagatcttgataaatgggttcgttttgcaattacaaagggagctcaaaagctggatcttcaattattaagaggcgctttggatccacatgataatttttatgtttttcctcactggatcctggcagatttgaacgcatcaaccttaaagcatttgtcgttgtatcgatgtgttctaaaacctcctactgattttgacagattcattcagctagaaactctttctctgaatgacgttgaagttgatccagaatttttggcacgtcttttctctgcttgtgtgcttctcgaaaggttcaccttgaacacatgtgacgtgcgctcaaatctgattattggtccatcccttcacctgcatgatctgaaagtgctcacgtgttaccgattaggaagaatagagattgatgcagtaaatctttcctccttagaatatgatggatctcatgcagagatttctttcatgagaactccacggctagtaagatgtctttttaagggatggtctataggtccggtacctcatgtgctaacccaactcacctcatgtcctgagcttgcgactcttcatctgcagatcagagataatttcgggttccaaggtatgtggttcgagatagagttggccatttgccttcttaaaattgctacaaagcttgaggtaatggtgattgatccacttggatcatactatgtcggtgatggaaggtgggtcaaaatgacctgttgttatcaggatgggaatgaagatgagaacccagaggaatatgatgatccaggagatgaaaatgtggacaatgtgccttatgaacttttacgttggcaaaaaagaggcagggcagcagtccaagaaaggctgaaagatgtaaagactgatgctcaagtcatcatcctctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

686

Amino Acids

77.98

Weight (kDa)

8.89

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1527
Acc36I ACCTGC 4 cut(s) 16, 517, 580, 1527
Acc65I GGTACC 1 cut(s) 1681
AccB1I GGYRCC 2 cut(s) 123, 1681
AccI GTMKAC 1 cut(s) 131
AciI CCGC 3 cut(s) 177, 796, 905
AcoI YGGCCR 6 cut(s) 100, 258, 643, 717, 730, 1788
AcsI RAATTY 4 cut(s) 368, 711, 1160, 1418
AcuI CTGAAG 1 cut(s) 1188
AcvI CACGTG 1 cut(s) 1542
AfaI GTAC 4 cut(s) 379, 742, 876, 1683
AfiI CCNNNNNNNGG 5 cut(s) 98, 160, 348, 608, 715
AflIII ACRYGT 2 cut(s) 1475, 1541
AgeI ACCGGT 1 cut(s) 126
AjiI CACGTC 3 cut(s) 749, 1430, 1483
AjnI CCWGG 4 cut(s) 513, 607, 1287, 1939
AjuI GAANNNNNNNTTGG 2 cut(s) 1082, 1114
AleI CACNNNNGTG 1 cut(s) 678
Alw21I GWGCWC 3 cut(s) 1107, 1213, 1539
Alw26I GTCTC 4 cut(s) 268, 410, 603, 902
AlwNI CAGNNNCTG 2 cut(s) 509, 572
AoxI GGCC 8 cut(s) 100, 258, 610, 643, 717, 730, 953, 1788
ApeKI GCWGC 3 cut(s) 850, 902, 2003
ApoI RAATTY 4 cut(s) 368, 711, 1160, 1418
AsiGI ACCGGT 1 cut(s) 126
Asp718I GGTACC 1 cut(s) 1681
AspLEI GCGC 2 cut(s) 1244, 1488
AspS9I GGNCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
AsuC2I CCSGG 1 cut(s) 536
AsuHPI GGTGA 7 cut(s) 175, 519, 1456, 1508, 1696, 1843, 1874
AvaII GGWCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
BaeGI GKGCMC 1 cut(s) 87
BalI TGGCCA 1 cut(s) 1790
BamHI GGATCC 2 cut(s) 1249, 1284
BanI GGYRCC 2 cut(s) 123, 1681
BanII GRGCYC 2 cut(s) 1107, 1213
BauI CACGAG 1 cut(s) 763
BbrPI CACGTG 1 cut(s) 1542
BbsI GAAGAC 1 cut(s) 953
Bbv12I GWGCWC 3 cut(s) 1107, 1213, 1539
BbvI GCAGC 3 cut(s) 837, 914, 2015
BccI CCATC 7 cut(s) 111, 1037, 1516, 1595, 1659, 1859, 1895
BceAI ACGGC 4 cut(s) 245, 745, 799, 1655
BciT130I CCWGG 4 cut(s) 515, 609, 1289, 1941
BcnI CCSGG 1 cut(s) 536
BcoDI GTCTC 4 cut(s) 268, 410, 603, 902
BfaI CTAG 6 cut(s) 321, 578, 912, 1124, 1379, 1643
BfmI CTRYAG 4 cut(s) 220, 807, 1671, 1736
BfoI RGCGCY 1 cut(s) 1245
BfuAI ACCTGC 4 cut(s) 16, 517, 580, 1527
BglII AGATCT 1 cut(s) 1171
BisI GCNGC 5 cut(s) 178, 796, 851, 903, 2004
BlpI GCTNAGC 1 cut(s) 791
BlsI GCNGC 5 cut(s) 179, 797, 852, 904, 2005
Bme1390I CCNGG 5 cut(s) 515, 536, 609, 1289, 1941
Bme18I GGWCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
BmgBI CACGTC 3 cut(s) 749, 1430, 1483
BmgT120I GGNCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
BmiI GGNNCC 9 cut(s) 6, 125, 205, 938, 994, 1251, 1286, 1683, 1760
BmrFI CCNGG 5 cut(s) 515, 536, 609, 1289, 1941
BmsI GCATC 5 cut(s) 646, 889, 1313, 1561, 2029
BpiI GAAGAC 1 cut(s) 953
BplI GAGNNNNNCTC 2 cut(s) 1094, 1126
BpmI CTGGAG 1 cut(s) 591
Bpu10I CCTNAGC 1 cut(s) 1716
Bpu1102I GCTNAGC 1 cut(s) 791
BpuEI CTTGAG 3 cut(s) 347, 1841, 2028
BpuMI CCSGG 1 cut(s) 536
Bsa29I ATCGAT 1 cut(s) 1333
BsaAI YACGTR 1 cut(s) 1542
BsaI GGTCTC 1 cut(s) 410
BsaJI CCNNGG 6 cut(s) 303, 513, 661, 676, 1637, 1762
BsaWI WCCGGW 2 cut(s) 126, 1678
BsaXI ACNNNNNCTCC 4 cut(s) 138, 168, 940, 970
Bsc4I CCNNNNNNNGG 5 cut(s) 98, 160, 348, 608, 715
Bse118I RCCGGY 2 cut(s) 126, 240
Bse1I ACTGG 4 cut(s) 406, 491, 928, 1286
BseBI CCWGG 4 cut(s) 515, 609, 1289, 1941
BseCI ATCGAT 1 cut(s) 1333
BseDI CCNNGG 6 cut(s) 303, 513, 661, 676, 1637, 1762
BseGI GGATG 5 cut(s) 869, 1508, 1670, 1906, 2052
BseLI CCNNNNNNNGG 5 cut(s) 98, 160, 348, 608, 715
BseMII CTCAG 3 cut(s) 516, 579, 1707
BseNI ACTGG 4 cut(s) 406, 491, 928, 1286
BseRI GAGGAG 1 cut(s) 996
BseSI GKGCMC 1 cut(s) 87
BseX3I CGGCCG 1 cut(s) 258
BseXI GCAGC 3 cut(s) 837, 914, 2015
Bsh1285I CGRYCG 2 cut(s) 131, 261
BshFI GGCC 8 cut(s) 102, 260, 612, 645, 719, 732, 955, 1790
BshNI GGYRCC 2 cut(s) 123, 1681
BshTI ACCGGT 1 cut(s) 126
BshVI ATCGAT 1 cut(s) 1333
BsiEI CGRYCG 2 cut(s) 131, 261
BsiHKAI GWGCWC 3 cut(s) 1107, 1213, 1539
BsiSI CCGG 8 cut(s) 99, 127, 241, 257, 535, 646, 854, 1679
BslI CCNNNNNNNGG 5 cut(s) 98, 160, 348, 608, 715
BsmAI GTCTC 4 cut(s) 268, 410, 603, 902
BsmBI CGTCTC 2 cut(s) 268, 603
BsmI GAATGC 2 cut(s) 1006, 1142
BsnI GGCC 8 cut(s) 102, 260, 612, 645, 719, 732, 955, 1790
Bso31I GGTCTC 1 cut(s) 410
Bsp1286I GDGCHC 4 cut(s) 87, 1107, 1213, 1539
Bsp1407I TGTACA 1 cut(s) 740
Bsp1720I GCTNAGC 1 cut(s) 791
BspACI CCGC 3 cut(s) 177, 796, 905
BspANI GGCC 8 cut(s) 102, 260, 612, 645, 719, 732, 955, 1790
BspCNI CTCAG 3 cut(s) 515, 578, 1708
BspDI ATCGAT 1 cut(s) 1333
BspHI TCATGA 1 cut(s) 1626
BspLI GGNNCC 9 cut(s) 6, 125, 205, 938, 994, 1251, 1286, 1683, 1760
BspMAI CTGCAG 1 cut(s) 1740
BspMI ACCTGC 4 cut(s) 16, 517, 580, 1527
BspT107I GGYRCC 2 cut(s) 123, 1681
BspTNI GGTCTC 1 cut(s) 410
BsrFI RCCGGY 2 cut(s) 126, 240
BsrGI TGTACA 1 cut(s) 740
BsrI ACTGG 4 cut(s) 406, 491, 928, 1286
BssAI RCCGGY 2 cut(s) 126, 240
BssECI CCNNGG 6 cut(s) 303, 513, 661, 676, 1637, 1762
BssSI CACGAG 1 cut(s) 763
BssT1I CCWWGG 3 cut(s) 303, 661, 1762
Bst2BI CACGAG 1 cut(s) 763
Bst2UI CCWGG 4 cut(s) 515, 609, 1289, 1941
Bst4CI ACNGT 7 cut(s) 163, 221, 623, 680, 817, 892, 1071
Bst6I CTCTTC 2 cut(s) 100, 1734
BstAUI TGTACA 1 cut(s) 740
BstBAI YACGTR 1 cut(s) 1542
BstC8I GCNNGC 2 cut(s) 788, 1722
BstDEI CTNAG 5 cut(s) 502, 565, 791, 1591, 1716
BstDSI CCRYGG 2 cut(s) 676, 1637
BstF5I GGATG 5 cut(s) 869, 1508, 1670, 1906, 2052
BstH2I RGCGCY 1 cut(s) 1245
BstHHI GCGC 2 cut(s) 1244, 1488
BstMAI GTCTC 4 cut(s) 268, 410, 603, 902
BstMCI CGRYCG 2 cut(s) 131, 261
BstMWI GCNNNNNNNGC 1 cut(s) 792
BstNI CCWGG 4 cut(s) 515, 609, 1289, 1941
BstNSI RCATGY 1 cut(s) 1479
BstSCI CCNGG 5 cut(s) 513, 534, 607, 1287, 1939
BstSFI CTRYAG 4 cut(s) 220, 807, 1671, 1736
BstSLI GKGCMC 1 cut(s) 87
BstV1I GCAGC 3 cut(s) 837, 914, 2015
BstV2I GAAGAC 1 cut(s) 953
BstX2I RGATCY 6 cut(s) 657, 1171, 1222, 1249, 1284, 1604
BstYI RGATCY 6 cut(s) 657, 1171, 1222, 1249, 1284, 1604
BstZI CGGCCG 1 cut(s) 258
Bsu15I ATCGAT 1 cut(s) 1333
BsuRI GGCC 8 cut(s) 102, 260, 612, 645, 719, 732, 955, 1790
BsuTUI ATCGAT 1 cut(s) 1333
BtgI CCRYGG 2 cut(s) 676, 1637
BtrI CACGTC 3 cut(s) 749, 1430, 1483
BtsCI GGATG 5 cut(s) 869, 1508, 1670, 1906, 2052
BtsIMutI CAGTG 5 cut(s) 217, 628, 935, 1076, 1279
BveI ACCTGC 4 cut(s) 16, 517, 580, 1527
Cac8I GCNNGC 2 cut(s) 788, 1722
CaiI CAGNNNCTG 2 cut(s) 509, 572
CciI TCATGA 1 cut(s) 1626
CfoI GCGC 2 cut(s) 1244, 1488
Cfr10I RCCGGY 2 cut(s) 126, 240
Cfr13I GGNCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
ClaI ATCGAT 1 cut(s) 1333
CseI GACGC 1 cut(s) 204
Csp6I GTAC 4 cut(s) 378, 741, 875, 1682
CspAI ACCGGT 1 cut(s) 126
CspCI CAANNNNNGTGG 2 cut(s) 1751, 1786
CviAII CATG 9 cut(s) 173, 343, 1256, 1476, 1523, 1610, 1627, 1688, 1710
CviQI GTAC 4 cut(s) 378, 741, 875, 1682
DdeI CTNAG 5 cut(s) 502, 565, 791, 1591, 1716
EaeI YGGCCR 6 cut(s) 100, 258, 643, 717, 730, 1788
EagI CGGCCG 1 cut(s) 258
Eam1104I CTCTTC 2 cut(s) 100, 1734
EarI CTCTTC 2 cut(s) 100, 1734
Ecl136II GAGCTC 2 cut(s) 1105, 1211
EclXI CGGCCG 1 cut(s) 258
Eco130I CCWWGG 3 cut(s) 303, 661, 1762
Eco147I AGGCCT 1 cut(s) 955
Eco24I GRGCYC 2 cut(s) 1107, 1213
Eco31I GGTCTC 1 cut(s) 410
Eco47I GGWCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
Eco52I CGGCCG 1 cut(s) 258
Eco53kI GAGCTC 2 cut(s) 1105, 1211
Eco57I CTGAAG 1 cut(s) 1188
Eco72I CACGTG 1 cut(s) 1542
EcoICRI GAGCTC 2 cut(s) 1105, 1211
EcoO109I RGGNCCY 3 cut(s) 204, 506, 569
EcoRII CCWGG 4 cut(s) 513, 607, 1287, 1939
EcoT14I CCWWGG 3 cut(s) 303, 661, 1762
EcoT38I GRGCYC 2 cut(s) 1107, 1213
ErhI CCWWGG 3 cut(s) 303, 661, 1762
Esp3I CGTCTC 2 cut(s) 268, 603
FaeI CATG 9 cut(s) 176, 346, 1259, 1479, 1526, 1613, 1630, 1691, 1713
FalI AAGNNNNNCTT 2 cut(s) 1228, 1260
FatI CATG 9 cut(s) 172, 342, 1255, 1475, 1522, 1609, 1626, 1687, 1709
FblI GTMKAC 1 cut(s) 131
Fnu4HI GCNGC 5 cut(s) 178, 796, 851, 903, 2004
FokI GGATG 5 cut(s) 856, 1495, 1677, 1913, 2039
FriOI GRGCYC 2 cut(s) 1107, 1213
Fsp4HI GCNGC 5 cut(s) 178, 796, 851, 903, 2004
FspBI CTAG 6 cut(s) 321, 578, 912, 1124, 1379, 1643
GlaI GCGC 2 cut(s) 1243, 1487
GluI GCNGC 5 cut(s) 178, 796, 851, 903, 2004
GsuI CTGGAG 1 cut(s) 591
HaeII RGCGCY 1 cut(s) 1245
HaeIII GGCC 8 cut(s) 102, 260, 612, 645, 719, 732, 955, 1790
HapII CCGG 8 cut(s) 99, 127, 241, 257, 535, 646, 854, 1679
HgaI GACGC 1 cut(s) 204
HhaI GCGC 2 cut(s) 1244, 1488
Hin1II CATG 9 cut(s) 176, 346, 1259, 1479, 1526, 1613, 1630, 1691, 1713
Hin6I GCGC 2 cut(s) 1242, 1486
HinP1I GCGC 2 cut(s) 1242, 1486
HincII GTYRAC 5 cut(s) 132, 236, 543, 695, 888
HindII GTYRAC 5 cut(s) 132, 236, 543, 695, 888
HindIII AAGCTT 3 cut(s) 735, 788, 1817
HinfI GANTC 8 cut(s) 253, 355, 561, 593, 757, 1127, 1368, 1726
HpaI GTTAAC 1 cut(s) 888
HpaII CCGG 8 cut(s) 99, 127, 241, 257, 535, 646, 854, 1679
HphI GGTGA 7 cut(s) 175, 519, 1456, 1508, 1696, 1843, 1874
Hpy166II GTNNAC 8 cut(s) 132, 236, 399, 543, 695, 888, 1464, 1957
Hpy188I TCNGA 8 cut(s) 252, 268, 410, 437, 1395, 1497, 1530, 1745
Hpy8I GTNNAC 8 cut(s) 132, 236, 399, 543, 695, 888, 1464, 1957
Hpy99I CGWCG 3 cut(s) 198, 287, 429
HpyAV CCTTC 7 cut(s) 281, 354, 423, 458, 1523, 1808, 1863
HpyCH4III ACNGT 7 cut(s) 163, 221, 623, 680, 817, 892, 1071
HpyCH4IV ACGT 6 cut(s) 748, 1401, 1429, 1482, 1541, 1981
HpyCH4V TGCA 7 cut(s) 11, 902, 1196, 1522, 1574, 1613, 1738
HpyF10VI GCNNNNNNNGC 1 cut(s) 792
HpyF3I CTNAG 5 cut(s) 502, 565, 791, 1591, 1716
HpySE526I ACGT 6 cut(s) 748, 1401, 1429, 1482, 1541, 1981
Hsp92II CATG 9 cut(s) 176, 346, 1259, 1479, 1526, 1613, 1630, 1691, 1713
HspAI GCGC 2 cut(s) 1242, 1486
KpnI GGTACC 1 cut(s) 1685
KspAI GTTAAC 1 cut(s) 888
LmnI GCTCC 3 cut(s) 1009, 1102, 1208
Lsp1109I GCAGC 3 cut(s) 837, 914, 2015
LweI GCATC 5 cut(s) 646, 889, 1313, 1561, 2029
MaeI CTAG 6 cut(s) 321, 578, 912, 1124, 1379, 1643
MaeII ACGT 6 cut(s) 748, 1401, 1429, 1482, 1541, 1981
MaeIII GTNAC 6 cut(s) 163, 525, 623, 1039, 1478, 1544
MflI RGATCY 6 cut(s) 657, 1171, 1222, 1249, 1284, 1604
MhlI GDGCHC 4 cut(s) 87, 1107, 1213, 1539
MlsI TGGCCA 1 cut(s) 1790
MluNI TGGCCA 1 cut(s) 1790
MlyI GAGTC 4 cut(s) 587, 751, 1121, 1720
MmeI TCCRAC 2 cut(s) 291, 433
Mox20I TGGCCA 1 cut(s) 1790
MscI TGGCCA 1 cut(s) 1790
MseI TTAA 6 cut(s) 887, 1152, 1235, 1313, 1659, 1803
MslI CAYNNNNRTG 3 cut(s) 390, 678, 1521
Msp20I TGGCCA 1 cut(s) 1790
MspA1I CMGCKG 1 cut(s) 905
MspI CCGG 8 cut(s) 99, 127, 241, 257, 535, 646, 854, 1679
MspR9I CCNGG 5 cut(s) 515, 536, 609, 1289, 1941
Mva1269I GAATGC 2 cut(s) 1006, 1142
MvaI CCWGG 4 cut(s) 515, 609, 1289, 1941
MwoI GCNNNNNNNGC 1 cut(s) 792
NciI CCSGG 1 cut(s) 536
NlaIII CATG 9 cut(s) 176, 346, 1259, 1479, 1526, 1613, 1630, 1691, 1713
NlaIV GGNNCC 9 cut(s) 6, 125, 205, 938, 994, 1251, 1286, 1683, 1760
NmuCI GTSAC 4 cut(s) 163, 525, 623, 1478
NspI RCATGY 1 cut(s) 1479
OliI CACNNNNGTG 1 cut(s) 678
PagI TCATGA 1 cut(s) 1626
PaqCI CACCTGC 1 cut(s) 1527
PceI AGGCCT 1 cut(s) 955
PciI ACATGT 1 cut(s) 1475
PctI GAATGC 2 cut(s) 1006, 1142
PfeI GAWTC 4 cut(s) 253, 355, 561, 1368
PfoI TCCNGGA 1 cut(s) 1939
PinAI ACCGGT 1 cut(s) 126
PkrI GCNGC 5 cut(s) 179, 797, 852, 904, 2005
PleI GAGTC 4 cut(s) 587, 751, 1121, 1720
PmaCI CACGTG 1 cut(s) 1542
PmlI CACGTG 1 cut(s) 1542
PpsI GAGTC 4 cut(s) 587, 751, 1121, 1720
Ppu21I YACGTR 1 cut(s) 1542
PpuMI RGGWCCY 3 cut(s) 204, 506, 569
PscI ACATGT 1 cut(s) 1475
Psp124BI GAGCTC 2 cut(s) 1107, 1213
Psp5II RGGWCCY 3 cut(s) 204, 506, 569
Psp6I CCWGG 4 cut(s) 513, 607, 1287, 1939
PspCI CACGTG 1 cut(s) 1542
PspGI CCWGG 4 cut(s) 513, 607, 1287, 1939
PspN4I GGNNCC 9 cut(s) 6, 125, 205, 938, 994, 1251, 1286, 1683, 1760
PspPI GGNCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
PspPPI RGGWCCY 3 cut(s) 204, 506, 569
PstI CTGCAG 1 cut(s) 1740
PstNI CAGNNNCTG 2 cut(s) 509, 572
PsuI RGATCY 6 cut(s) 657, 1171, 1222, 1249, 1284, 1604
RsaI GTAC 4 cut(s) 379, 742, 876, 1683
RsaNI GTAC 4 cut(s) 378, 741, 875, 1682
RseI CAYNNNNRTG 3 cut(s) 390, 678, 1521
SacI GAGCTC 2 cut(s) 1107, 1213
SalI GTCGAC 1 cut(s) 130
SaqAI TTAA 6 cut(s) 887, 1152, 1235, 1313, 1659, 1803
SatI GCNGC 5 cut(s) 178, 796, 851, 903, 2004
Sau96I GGNCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
SchI GAGTC 4 cut(s) 587, 751, 1121, 1720
ScrFI CCNGG 5 cut(s) 515, 536, 609, 1289, 1941
SduI GDGCHC 4 cut(s) 87, 1107, 1213, 1539
SfaNI GCATC 5 cut(s) 646, 889, 1313, 1561, 2029
SfcI CTRYAG 4 cut(s) 220, 807, 1671, 1736
SinI GGWCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
SmiMI CAYNNNNRTG 3 cut(s) 390, 678, 1521
SmlI CTYRAG 3 cut(s) 326, 1820, 2043
SmoI CTYRAG 3 cut(s) 326, 1820, 2043
SseBI AGGCCT 1 cut(s) 955
SsiI CCGC 3 cut(s) 177, 796, 905
SspI AATATT 1 cut(s) 985
SspMI CTAG 6 cut(s) 321, 578, 912, 1124, 1379, 1643
SstI GAGCTC 2 cut(s) 1107, 1213
StuI AGGCCT 1 cut(s) 955
StyD4I CCNGG 5 cut(s) 513, 534, 607, 1287, 1939
StyI CCWWGG 3 cut(s) 303, 661, 1762
TaaI ACNGT 7 cut(s) 163, 221, 623, 680, 817, 892, 1071
TaiI ACGT 6 cut(s) 751, 1404, 1432, 1485, 1544, 1984
TaqII GACCGA 3 cut(s) 560, 680, 1014
TatI WGTACW 1 cut(s) 740
TauI GCSGC 2 cut(s) 180, 798
TfiI GAWTC 4 cut(s) 253, 355, 561, 1368
Tru1I TTAA 6 cut(s) 887, 1152, 1235, 1313, 1659, 1803
Tru9I TTAA 6 cut(s) 887, 1152, 1235, 1313, 1659, 1803
TscAI CASTG 5 cut(s) 224, 628, 935, 1076, 1286
TseFI GTSAC 4 cut(s) 163, 525, 623, 1478
TseI GCWGC 3 cut(s) 850, 902, 2003
Tsp45I GTSAC 4 cut(s) 163, 525, 623, 1478
TspDTI ATGAA 9 cut(s) 374, 870, 1107, 1360, 1615, 1721, 1923, 1962, 1986
TspGWI ACGGA 3 cut(s) 576, 862, 985
TspRI CASTG 5 cut(s) 224, 628, 935, 1076, 1286
VpaK11BI GGWCC 7 cut(s) 204, 506, 569, 993, 1026, 1505, 1676
XapI RAATTY 4 cut(s) 368, 711, 1160, 1418
XceI RCATGY 1 cut(s) 1479
XmiI GTMKAC 1 cut(s) 131
XspI CTAG 6 cut(s) 321, 578, 912, 1124, 1379, 1643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.