Rh2DG621600

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000084
Physical Location & Seq
Forward (+)
85188593 .. 85202332
13740 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG621600.1

Sequence Viewer

Length: 1602 bp
ATGAATATATATTTATATGGAAACACTATTCCCAATGAACGAGGATGGATCTCAAAAGCACAAACTGCATTCACACAGCAGAAAAATTCTGTCACTCAAACCCCTAACAATATCTCTCCCTTGTTAATTTCTACGGTTGAGGGGGAGAGTAAAGATTGGATAAATGAGCTGCCGGATTGCATTCTGTCATCCATACTTTCATTCTTAACAATAAAAGATGCAGCGAAGACTAGCGTTGTATCCCGCCAGTGGAGGAACCTTTGGAAGACAAGGCCCCCCAATCTTGAATTAGACATTGTAAATATTTTTGGGTCCGTGCATGCTCCACTTCTTGAAAGATATAGGTCCATCTATAGTGTTACATCTTTGAGTCGTCAATTCGACAGAGAGTGCTATATAAAACGTGTGAATGAAGTTTTGGAGCTCTACTCTGGCAACAAGCTAGACTCATTCAAAGTGGCATTCTTTTTTAATCGAGAATTTGCTGAAGATCTTGACAAATGGGTTCGTTTTGCAATTACAAAGGGAGCTCAAAAGCTGGATCTTCGATTATTAAAAGGCGCTTTGGACCCATATCATAATTTTTATGTTTTTCCTCACTGGATCCTTGCAGATTTGAACGCATCAACCCTAAAGCATTTGTCGTTGTATCGATGTGTTCTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAGAAACTCTTTCTCTGAATGACGTTGTAGTCGATCCAGATTTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAACTTCACCTTGAACACATGTGATGTGCGCTCAAATCTGATTATTGGTCCATCGCTTCACCTGCATGATCTGAAAGTGCTCACGTGTTACCGATTAGGAAGAATAGAGATTGATGCAGTAAATCTTTCCTCCTTAGAATATGATGGATCTCATACAGAGATTTCTTTCATGAGAACTCCACGGCTAGTAAGATGTTTTTTTAAGGGATGGTGTATAGGTCCAGTTCCTCATGTGCTAACCCAACTCCCCCTGTGTTCTGAGCTTGGGACTCTTCATCTGCAGCCCAGAGATAATTTCGAACACATACCCCAAACTTTTCCAACATTGAGAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACTTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCTCTTTTGGAAGAACTTACAATAACAACACAAGCTGCAGACTATCACGGAGAGATGAGGAATCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTTGAGATAGAGTTCGCCATTTGCCTTCTTAAAATTGCAACAAAGCTTGAGGTAATGGTGATTGATCCACATGGATCACTCTACGACGGTGATGGAACTTGGGTCAAAATGACCTGTTGTTATCAGGATGGGAACGAGGATGAGAACCCAGAGGAATATGAGGACTCAGACGAAGATGAGAATGTGGACAATGTGCCTAATGAACTTTTCCGTTGGCAAAAAAGAGGCAGGGCAGCGGTCCAAGAAAGGCTGAAAGATGTAAAGAGTGATGCTCAAATCATCATCCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

533

Amino Acids

61.39

Weight (kDa)

5.68

Isoelectric Point (pI)

33.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 54 - 93 9.9e-09 F-box domain
LRR_At1g61320_AtMIF1 PF23622 140 - 462 7.5e-41 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 165 - 321 6.6e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 846
AasI GACNNNNNNGTC 1 cut(s) 725
Acc36I ACCTGC 1 cut(s) 846
AciI CCGC 2 cut(s) 244, 1547
AclWI GGATC 9 cut(s) 56, 549, 598, 611, 725, 931, 1137, 1370, 1393
AcsI RAATTY 2 cut(s) 85, 479
AcuI CTGAAG 1 cut(s) 507
AcvI CACGTG 1 cut(s) 861
AfiI CCNNNNNNNGG 1 cut(s) 249
AflIII ACRYGT 3 cut(s) 403, 794, 860
AgsI TTSAA 6 cut(s) 287, 335, 454, 619, 790, 1151
AjiI CACGTC 1 cut(s) 749
AjuI GAANNNNNNNTTGG 2 cut(s) 401, 433
AluBI AGCT 9 cut(s) 169, 424, 442, 530, 538, 697, 1039, 1220, 1357
AluI AGCT 9 cut(s) 169, 424, 442, 530, 538, 697, 1039, 1220, 1357
Alw21I GWGCWC 3 cut(s) 426, 532, 858
AlwI GGATC 9 cut(s) 56, 549, 598, 611, 725, 931, 1137, 1370, 1393
AoxI GGCC 1 cut(s) 272
ApeKI GCWGC 6 cut(s) 169, 221, 1057, 1181, 1220, 1544
ApoI RAATTY 2 cut(s) 85, 479
AspLEI GCGC 2 cut(s) 563, 807
AspS9I GGNCC 7 cut(s) 273, 312, 345, 568, 824, 995, 1549
AsuHPI GGTGA 4 cut(s) 775, 827, 1381, 1412
AsuII TTCGAA 1 cut(s) 1074
AvaII GGWCC 6 cut(s) 312, 345, 568, 824, 995, 1549
BamHI GGATCC 1 cut(s) 603
BanII GRGCYC 2 cut(s) 426, 532
BbrPI CACGTG 1 cut(s) 861
BbsI GAAGAC 2 cut(s) 233, 272
Bbv12I GWGCWC 3 cut(s) 426, 532, 858
BbvI GCAGC 6 cut(s) 156, 233, 1069, 1168, 1207, 1556
BccI CCATC 7 cut(s) 39, 356, 835, 914, 978, 1397, 1433
BceAI ACGGC 1 cut(s) 974
BciVI GTATCC 1 cut(s) 250
BfaI CTAG 4 cut(s) 231, 443, 698, 962
BfmI CTRYAG 3 cut(s) 352, 1055, 1221
BfoI RGCGCY 1 cut(s) 564
BfuAI ACCTGC 1 cut(s) 846
BfuI GTATCC 1 cut(s) 250
BglII AGATCT 1 cut(s) 490
BisI GCNGC 6 cut(s) 170, 222, 1058, 1182, 1221, 1545
BlsI GCNGC 6 cut(s) 171, 223, 1059, 1183, 1222, 1546
Bme18I GGWCC 6 cut(s) 312, 345, 568, 824, 995, 1549
BmgBI CACGTC 1 cut(s) 749
BmgT120I GGNCC 7 cut(s) 273, 312, 345, 568, 824, 995, 1549
BmiI GGNNCC 6 cut(s) 257, 275, 313, 570, 605, 1298
BmsI GCATC 5 cut(s) 208, 632, 880, 1278, 1570
BpiI GAAGAC 2 cut(s) 233, 272
BplI GAGNNNNNCTC 4 cut(s) 413, 445, 1567, 1599
Bpu14I TTCGAA 1 cut(s) 1074
BpuEI CTTGAG 2 cut(s) 1160, 1379
Bsa29I ATCGAT 1 cut(s) 652
BsaAI YACGTR 1 cut(s) 861
BsaJI CCNNGG 2 cut(s) 956, 1300
Bsc4I CCNNNNNNNGG 1 cut(s) 249
Bse1I ACTGG 3 cut(s) 247, 605, 998
BseCI ATCGAT 1 cut(s) 652
BseDI CCNNGG 2 cut(s) 956, 1300
BseGI GGATG 6 cut(s) 50, 188, 989, 1444, 1456, 1593
BseLI CCNNNNNNNGG 1 cut(s) 249
BseMII CTCAG 2 cut(s) 1026, 1491
BseNI ACTGG 3 cut(s) 247, 605, 998
BseRI GAGGAG 1 cut(s) 1124
BseXI GCAGC 6 cut(s) 156, 233, 1069, 1168, 1207, 1556
BsgI GTGCAG 1 cut(s) 1167
BshFI GGCC 1 cut(s) 274
BshVI ATCGAT 1 cut(s) 652
BsiHKAI GWGCWC 3 cut(s) 426, 532, 858
BsiSI CCGG 1 cut(s) 173
BslFI GGGAC 1 cut(s) 1057
BslI CCNNNNNNNGG 1 cut(s) 249
BsmFI GGGAC 1 cut(s) 1057
BsmI GAATGC 3 cut(s) 68, 180, 461
BsnI GGCC 1 cut(s) 274
Bsp119I TTCGAA 1 cut(s) 1074
Bsp1286I GDGCHC 3 cut(s) 426, 532, 858
BspACI CCGC 2 cut(s) 244, 1547
BspANI GGCC 1 cut(s) 274
BspCNI CTCAG 2 cut(s) 1027, 1490
BspDI ATCGAT 1 cut(s) 652
BspHI TCATGA 1 cut(s) 945
BspLI GGNNCC 6 cut(s) 257, 275, 313, 570, 605, 1298
BspMAI CTGCAG 2 cut(s) 1059, 1225
BspMI ACCTGC 1 cut(s) 846
BspPI GGATC 9 cut(s) 56, 549, 598, 611, 725, 931, 1137, 1370, 1393
BspT104I TTCGAA 1 cut(s) 1074
BsrI ACTGG 3 cut(s) 247, 605, 998
BssECI CCNNGG 2 cut(s) 956, 1300
BssT1I CCWWGG 1 cut(s) 1300
Bst4CI ACNGT 2 cut(s) 136, 1400
Bst6I CTCTTC 1 cut(s) 1053
BstAPI GCANNNNNTGC 1 cut(s) 65
BstBAI YACGTR 1 cut(s) 861
BstBI TTCGAA 1 cut(s) 1074
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 3 cut(s) 910, 1035, 1477
BstDSI CCRYGG 1 cut(s) 956
BstF5I GGATG 6 cut(s) 50, 188, 989, 1444, 1456, 1593
BstH2I RGCGCY 1 cut(s) 564
BstHHI GCGC 2 cut(s) 563, 807
BstMWI GCNNNNNNNGC 2 cut(s) 65, 838
BstNSI RCATGY 2 cut(s) 323, 798
BstSFI CTRYAG 3 cut(s) 352, 1055, 1221
BstV1I GCAGC 6 cut(s) 156, 233, 1069, 1168, 1207, 1556
BstV2I GAAGAC 2 cut(s) 233, 272
BstX2I RGATCY 6 cut(s) 48, 490, 541, 603, 923, 1129
BstYI RGATCY 6 cut(s) 48, 490, 541, 603, 923, 1129
Bsu15I ATCGAT 1 cut(s) 652
BsuI GTATCC 1 cut(s) 250
BsuRI GGCC 1 cut(s) 274
BsuTUI ATCGAT 1 cut(s) 652
BtgI CCRYGG 1 cut(s) 956
BtgZI GCGATG 1 cut(s) 813
BtrI CACGTC 1 cut(s) 749
BtsCI GGATG 6 cut(s) 50, 188, 989, 1444, 1456, 1593
BtsIMutI CAGTG 2 cut(s) 254, 598
BveI ACCTGC 1 cut(s) 846
Cac8I GCNNGC 1 cut(s) 321
CciI TCATGA 1 cut(s) 945
CfoI GCGC 2 cut(s) 563, 807
Cfr13I GGNCC 7 cut(s) 273, 312, 345, 568, 824, 995, 1549
ClaI ATCGAT 1 cut(s) 652
CspCI CAANNNNNGTGG 2 cut(s) 1289, 1324
CviAII CATG 7 cut(s) 320, 795, 842, 946, 1007, 1138, 1382
DdeI CTNAG 3 cut(s) 910, 1035, 1477
DrdI GACNNNNNNGTC 1 cut(s) 725
DseDI GACNNNNNNGTC 1 cut(s) 725
Eam1104I CTCTTC 1 cut(s) 1053
EarI CTCTTC 1 cut(s) 1053
Ecl136II GAGCTC 2 cut(s) 424, 530
Eco130I CCWWGG 1 cut(s) 1300
Eco24I GRGCYC 2 cut(s) 426, 532
Eco47I GGWCC 6 cut(s) 312, 345, 568, 824, 995, 1549
Eco53kI GAGCTC 2 cut(s) 424, 530
Eco57I CTGAAG 1 cut(s) 507
Eco72I CACGTG 1 cut(s) 861
EcoICRI GAGCTC 2 cut(s) 424, 530
EcoO109I RGGNCCY 1 cut(s) 273
EcoT14I CCWWGG 1 cut(s) 1300
EcoT38I GRGCYC 2 cut(s) 426, 532
ErhI CCWWGG 1 cut(s) 1300
FaeI CATG 7 cut(s) 323, 798, 845, 949, 1010, 1141, 1385
FaqI GGGAC 1 cut(s) 1057
FatI CATG 7 cut(s) 319, 794, 841, 945, 1006, 1137, 1381
FauI CCCGC 1 cut(s) 251
Fnu4HI GCNGC 6 cut(s) 170, 222, 1058, 1182, 1221, 1545
FokI GGATG 6 cut(s) 57, 175, 996, 1451, 1463, 1580
FriOI GRGCYC 2 cut(s) 426, 532
Fsp4HI GCNGC 6 cut(s) 170, 222, 1058, 1182, 1221, 1545
FspBI CTAG 4 cut(s) 231, 443, 698, 962
GlaI GCGC 2 cut(s) 562, 806
GluI GCNGC 6 cut(s) 170, 222, 1058, 1182, 1221, 1545
HaeII RGCGCY 1 cut(s) 564
HaeIII GGCC 1 cut(s) 274
HapII CCGG 1 cut(s) 173
HhaI GCGC 2 cut(s) 563, 807
Hin1II CATG 7 cut(s) 323, 798, 845, 949, 1010, 1141, 1385
Hin6I GCGC 2 cut(s) 561, 805
HinP1I GCGC 2 cut(s) 561, 805
HindIII AAGCTT 1 cut(s) 1355
HinfI GANTC 6 cut(s) 370, 446, 687, 1045, 1246, 1475
HpaII CCGG 1 cut(s) 173
HphI GGTGA 4 cut(s) 775, 827, 1381, 1412
Hpy166II GTNNAC 1 cut(s) 1498
Hpy188I TCNGA 5 cut(s) 714, 816, 849, 1036, 1480
Hpy188III TCNNGA 8 cut(s) 284, 332, 476, 494, 734, 773, 946, 1436
Hpy8I GTNNAC 1 cut(s) 1498
Hpy99I CGWCG 1 cut(s) 1400
HpyAV CCTTC 1 cut(s) 1346
HpyCH4III ACNGT 2 cut(s) 136, 1400
HpyCH4IV ACGT 4 cut(s) 403, 720, 748, 860
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 838
HpyF3I CTNAG 3 cut(s) 910, 1035, 1477
HpySE526I ACGT 4 cut(s) 403, 720, 748, 860
Hsp92II CATG 7 cut(s) 323, 798, 845, 949, 1010, 1141, 1385
HspAI GCGC 2 cut(s) 561, 805
LmnI GCTCC 3 cut(s) 328, 421, 527
Lsp1109I GCAGC 6 cut(s) 156, 233, 1069, 1168, 1207, 1556
LweI GCATC 5 cut(s) 208, 632, 880, 1278, 1570
MaeI CTAG 4 cut(s) 231, 443, 698, 962
MaeII ACGT 4 cut(s) 403, 720, 748, 860
MaeIII GTNAC 3 cut(s) 91, 358, 863
MboII GAAGA 8 cut(s) 238, 277, 500, 536, 888, 1040, 1208, 1496
MflI RGATCY 6 cut(s) 48, 490, 541, 603, 923, 1129
MhlI GDGCHC 3 cut(s) 426, 532, 858
MluCI AATT 9 cut(s) 85, 126, 287, 377, 479, 516, 580, 1069, 1344
MlyI GAGTC 4 cut(s) 379, 440, 1039, 1469
MmeI TCCRAC 2 cut(s) 1107, 1121
MseI TTAA 6 cut(s) 125, 206, 471, 554, 978, 1341
MslI CAYNNNNRTG 1 cut(s) 840
MspA1I CMGCKG 1 cut(s) 1547
MspI CCGG 1 cut(s) 173
Mva1269I GAATGC 3 cut(s) 68, 180, 461
MwoI GCNNNNNNNGC 2 cut(s) 65, 838
NlaIII CATG 7 cut(s) 323, 798, 845, 949, 1010, 1141, 1385
NlaIV GGNNCC 6 cut(s) 257, 275, 313, 570, 605, 1298
NmuCI GTSAC 1 cut(s) 91
NspI RCATGY 2 cut(s) 323, 798
NspV TTCGAA 1 cut(s) 1074
PaeI GCATGC 1 cut(s) 323
PagI TCATGA 1 cut(s) 945
PaqCI CACCTGC 1 cut(s) 846
PciI ACATGT 1 cut(s) 794
PcsI WCGNNNNNNNCGW 1 cut(s) 726
PctI GAATGC 3 cut(s) 68, 180, 461
PfeI GAWTC 2 cut(s) 687, 1246
PkrI GCNGC 6 cut(s) 171, 223, 1059, 1183, 1222, 1546
PleI GAGTC 4 cut(s) 378, 440, 1039, 1469
PmaCI CACGTG 1 cut(s) 861
PmlI CACGTG 1 cut(s) 861
PpsI GAGTC 4 cut(s) 378, 440, 1039, 1469
Ppu21I YACGTR 1 cut(s) 861
PscI ACATGT 1 cut(s) 794
Psp124BI GAGCTC 2 cut(s) 426, 532
PspCI CACGTG 1 cut(s) 861
PspN4I GGNNCC 6 cut(s) 257, 275, 313, 570, 605, 1298
PspPI GGNCC 7 cut(s) 273, 312, 345, 568, 824, 995, 1549
PstI CTGCAG 2 cut(s) 1059, 1225
PsuI RGATCY 6 cut(s) 48, 490, 541, 603, 923, 1129
RseI CAYNNNNRTG 1 cut(s) 840
SacI GAGCTC 2 cut(s) 426, 532
SaqAI TTAA 6 cut(s) 125, 206, 471, 554, 978, 1341
SatI GCNGC 6 cut(s) 170, 222, 1058, 1182, 1221, 1545
Sau96I GGNCC 7 cut(s) 273, 312, 345, 568, 824, 995, 1549
SchI GAGTC 4 cut(s) 379, 440, 1039, 1469
SduI GDGCHC 3 cut(s) 426, 532, 858
SfaNI GCATC 5 cut(s) 208, 632, 880, 1278, 1570
SfcI CTRYAG 3 cut(s) 352, 1055, 1221
SfuI TTCGAA 1 cut(s) 1074
SinI GGWCC 6 cut(s) 312, 345, 568, 824, 995, 1549
SmiMI CAYNNNNRTG 1 cut(s) 840
SmlI CTYRAG 2 cut(s) 1175, 1358
SmoI CTYRAG 2 cut(s) 1175, 1358
SphI GCATGC 1 cut(s) 323
Sse9I AATT 9 cut(s) 85, 126, 287, 377, 479, 516, 580, 1069, 1344
SsiI CCGC 2 cut(s) 244, 1547
SspI AATATT 2 cut(s) 304, 1171
SspMI CTAG 4 cut(s) 231, 443, 698, 962
SstI GAGCTC 2 cut(s) 426, 532
StyI CCWWGG 1 cut(s) 1300
TaaI ACNGT 2 cut(s) 136, 1400
TaiI ACGT 4 cut(s) 406, 723, 751, 863
TaqI TCGA 7 cut(s) 381, 475, 547, 652, 729, 774, 1074
TasI AATT 9 cut(s) 85, 126, 287, 377, 479, 516, 580, 1069, 1344
TfiI GAWTC 2 cut(s) 687, 1246
Tru1I TTAA 6 cut(s) 125, 206, 471, 554, 978, 1341
Tru9I TTAA 6 cut(s) 125, 206, 471, 554, 978, 1341
TscAI CASTG 2 cut(s) 254, 605
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 6 cut(s) 169, 221, 1057, 1181, 1220, 1544
Tsp45I GTSAC 1 cut(s) 91
TspDTI ATGAA 8 cut(s) 17, 51, 189, 426, 679, 934, 1040, 1527
TspGWI ACGGA 3 cut(s) 304, 1248, 1511
TspRI CASTG 2 cut(s) 254, 605
VpaK11BI GGWCC 6 cut(s) 312, 345, 568, 824, 995, 1549
XapI RAATTY 2 cut(s) 85, 479
XceI RCATGY 2 cut(s) 323, 798
XspI CTAG 4 cut(s) 231, 443, 698, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.