Rh2AG030200

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000084
Physical Location & Seq
Reverse (-)
2100865 .. 2106196
5332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG030200.1

Sequence Viewer

Length: 999 bp
ATGAAAAGAATGCGTCAGATTAGTGACCCTGGCCCAGTTGGGGGTTCTTCTCCTAGAAAGTGCAACCGCATTGACAATGATCGCATCAGTTCATTGCCGGATGATATCCTTCATCACATTATCTCGTTTTTGAGTTTGAGGGAAGCTGTAAGCACGAGTGTTTTGTCTCACCGGTGGAAGAAGATGTATGCGTACATGTCAAATCTCGAATTTGATTGGTGTAAGATGCTTGCAGCCAAAAGGGCAGCTAGACGGGTCTCCAATCCAAATAGGGGAGTCTGTTGCAGGAAGAATGTGCGTTTTTTGGTGATAAGAATAGATAGATTCCTAACCCGCCATTTGCGCTCGAGGATTGCCTCGTTCAAGGTTCGTTGCTGCCTTAAAGATAAGTATGCTCTTAATATCAATGACTGGATTGATTGTGCTGTCAGAAAGGGTGTCGAAAATCTTGACCTAGCCTTCACATGTGATGACATATCTCAACGAATCGATTGGCCACGCATGGGCTATTATCAGTTTCCTACTCATCTCCTTGCAGAGGGTAAAGCATCCAGATTAAGGAATCTTTCCTTGCGTTCATGCATGCTTAGGGTAGATTTTCAGGATCGATTCAGCACACTCTCCACTCTTGTGTTGTGTGATGTATATTTTGAAGGACAAGCTAATCCGCTCATGTTTTGTTCTTGTTTAAAGCTTCAGTCTTTGACATTGCAATCGTGTTTTGGATTAGAAAGATTCAGCATTTCACTCGATTATTTGAAGTCACTGGTAGTGAGAAAGTGCATAGGTTTAAGAGGTATTGAGCTTAGTGCCCCCAATCTTACAACCTTTTATTGTGAAGGCAATGTGATCAAGATCTCATGCATAAAAGTTCCGAATCTGGTGGAAGTTTATGTTTCACTAGGCGGAATTAGTGTTATACATACTTTTGCTCAGCTTGAGAAAGATCTTCCTAATGTCAAGTCTCTGACAGTGAACAAAAGAAATATACCTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

332

Amino Acids

38.06

Weight (kDa)

9.59

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 61 1.4e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 111 - 327 7.2e-28 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 136 - 294 6.6e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 670
AciI CCGC 4 cut(s) 67, 334, 668, 906
AclWI GGATC 1 cut(s) 612
AcoI YGGCCR 1 cut(s) 494
AcsI RAATTY 1 cut(s) 209
AcuI CTGAAG 1 cut(s) 680
AfaI GTAC 1 cut(s) 194
AfiI CCNNNNNNNGG 6 cut(s) 40, 41, 272, 503, 538, 558
AflIII ACRYGT 2 cut(s) 195, 464
AgeI ACCGGT 1 cut(s) 171
AgsI TTSAA 3 cut(s) 364, 653, 760
AjnI CCWGG 1 cut(s) 28
AleI CACNNNNGTG 1 cut(s) 629
AluBI AGCT 6 cut(s) 146, 248, 662, 694, 805, 937
AluI AGCT 6 cut(s) 146, 248, 662, 694, 805, 937
Alw26I GTCTC 3 cut(s) 171, 262, 969
AlwI GGATC 1 cut(s) 612
Ama87I CYCGRG 1 cut(s) 346
AoxI GGCC 2 cut(s) 31, 494
ApeKI GCWGC 3 cut(s) 233, 245, 375
ApoI RAATTY 1 cut(s) 209
AsiGI ACCGGT 1 cut(s) 171
AspLEI GCGC 1 cut(s) 345
AspS9I GGNCC 1 cut(s) 32
AsuHPI GGTGA 2 cut(s) 161, 319
AvaI CYCGRG 1 cut(s) 346
BaeGI GKGCMC 1 cut(s) 814
BalI TGGCCA 1 cut(s) 496
BauI CACGAG 1 cut(s) 154
BbvI GCAGC 3 cut(s) 245, 257, 362
BcgI CGANNNNNNTGC 2 cut(s) 730, 764
BciT130I CCWGG 1 cut(s) 30
BclI TGATCA 1 cut(s) 849
BcoDI GTCTC 3 cut(s) 171, 262, 969
BfaI CTAG 4 cut(s) 54, 249, 455, 902
BglI GCCNNNNNGGC 1 cut(s) 242
BglII AGATCT 2 cut(s) 855, 946
BisI GCNGC 3 cut(s) 234, 246, 376
BlpI GCTNAGC 1 cut(s) 933
BlsI GCNGC 3 cut(s) 235, 247, 377
Bme1390I CCNGG 1 cut(s) 30
BmeT110I CYCGRG 1 cut(s) 346
BmgT120I GGNCC 1 cut(s) 32
BmrFI CCNGG 1 cut(s) 30
BmrI ACTGGG 1 cut(s) 29
BmsI GCATC 3 cut(s) 93, 216, 557
BmuI ACTGGG 1 cut(s) 29
Bpu10I CCTNAGC 1 cut(s) 587
Bpu1102I GCTNAGC 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 959
Bsa29I ATCGAT 2 cut(s) 489, 607
BsaBI GATNNNNATC 1 cut(s) 854
BsaI GGTCTC 1 cut(s) 262
BsaJI CCNNGG 1 cut(s) 28
BsaWI WCCGGW 1 cut(s) 171
Bsc4I CCNNNNNNNGG 6 cut(s) 40, 41, 272, 503, 538, 558
Bse118I RCCGGY 1 cut(s) 171
Bse1I ACTGG 3 cut(s) 35, 416, 771
Bse3DI GCAATG 3 cut(s) 92, 707, 850
Bse8I GATNNNNATC 1 cut(s) 854
BseBI CCWGG 1 cut(s) 30
BseCI ATCGAT 2 cut(s) 489, 607
BseDI CCNNGG 1 cut(s) 28
BseGI GGATG 2 cut(s) 106, 548
BseJI GATNNNNATC 1 cut(s) 854
BseLI CCNNNNNNNGG 6 cut(s) 40, 41, 272, 503, 538, 558
BseMI GCAATG 3 cut(s) 92, 707, 850
BseMII CTCAG 1 cut(s) 947
BseNI ACTGG 3 cut(s) 35, 416, 771
BseSI GKGCMC 1 cut(s) 814
BseXI GCAGC 3 cut(s) 245, 257, 362
BshFI GGCC 2 cut(s) 33, 496
BshTI ACCGGT 1 cut(s) 171
BshVI ATCGAT 2 cut(s) 489, 607
BsiHKCI CYCGRG 1 cut(s) 346
BsiSI CCGG 2 cut(s) 98, 172
BslI CCNNNNNNNGG 6 cut(s) 40, 41, 272, 503, 538, 558
BsmAI GTCTC 3 cut(s) 171, 262, 969
BsmI GAATGC 1 cut(s) 15
BsnI GGCC 2 cut(s) 33, 496
Bso31I GGTCTC 1 cut(s) 262
BsoBI CYCGRG 1 cut(s) 346
Bsp1286I GDGCHC 1 cut(s) 814
Bsp143I GATC 5 cut(s) 79, 604, 849, 855, 946
Bsp1720I GCTNAGC 1 cut(s) 933
BspACI CCGC 4 cut(s) 67, 334, 668, 906
BspANI GGCC 2 cut(s) 33, 496
BspCNI CTCAG 1 cut(s) 946
BspDI ATCGAT 2 cut(s) 489, 607
BspPI GGATC 1 cut(s) 612
BspTNI GGTCTC 1 cut(s) 262
BsrBI CCGCTC 1 cut(s) 670
BsrDI GCAATG 3 cut(s) 92, 707, 850
BsrFI RCCGGY 1 cut(s) 171
BsrI ACTGG 3 cut(s) 35, 416, 771
BssAI RCCGGY 1 cut(s) 171
BssECI CCNNGG 1 cut(s) 28
BssMI GATC 5 cut(s) 79, 604, 849, 855, 946
BssSI CACGAG 1 cut(s) 154
Bst2BI CACGAG 1 cut(s) 154
Bst2UI CCWGG 1 cut(s) 30
Bst4CI ACNGT 1 cut(s) 973
BstC8I GCNNGC 2 cut(s) 231, 584
BstDEI CTNAG 3 cut(s) 587, 806, 933
BstENI CCTNNNNNAGG 1 cut(s) 536
BstF5I GGATG 2 cut(s) 106, 548
BstHHI GCGC 1 cut(s) 345
BstKTI GATC 5 cut(s) 82, 607, 852, 858, 949
BstMAI GTCTC 3 cut(s) 171, 262, 969
BstMBI GATC 5 cut(s) 79, 604, 849, 855, 946
BstMWI GCNNNNNNNGC 2 cut(s) 242, 342
BstNI CCWGG 1 cut(s) 30
BstNSI RCATGY 3 cut(s) 199, 468, 586
BstSCI CCNGG 1 cut(s) 28
BstSLI GKGCMC 1 cut(s) 814
BstV1I GCAGC 3 cut(s) 245, 257, 362
BstX2I RGATCY 2 cut(s) 855, 946
BstYI RGATCY 2 cut(s) 855, 946
Bsu15I ATCGAT 2 cut(s) 489, 607
BsuRI GGCC 2 cut(s) 33, 496
BsuTUI ATCGAT 2 cut(s) 489, 607
BtsCI GGATG 2 cut(s) 106, 548
BtsIMutI CAGTG 2 cut(s) 764, 978
Cac8I GCNNGC 2 cut(s) 231, 584
CfoI GCGC 1 cut(s) 345
Cfr10I RCCGGY 1 cut(s) 171
Cfr13I GGNCC 1 cut(s) 32
ClaI ATCGAT 2 cut(s) 489, 607
CseI GACGC 1 cut(s) 2
Csp6I GTAC 1 cut(s) 193
CspAI ACCGGT 1 cut(s) 171
CviAII CATG 7 cut(s) 196, 465, 502, 579, 583, 673, 861
CviQI GTAC 1 cut(s) 193
DdeI CTNAG 3 cut(s) 587, 806, 933
DpnI GATC 5 cut(s) 81, 606, 851, 857, 948
DpnII GATC 5 cut(s) 79, 604, 849, 855, 946
DraI TTTAAA 1 cut(s) 690
EaeI YGGCCR 1 cut(s) 494
EciI GGCGGA 1 cut(s) 921
Eco31I GGTCTC 1 cut(s) 262
Eco32I GATATC 1 cut(s) 106
Eco57I CTGAAG 1 cut(s) 680
Eco88I CYCGRG 1 cut(s) 346
EcoNI CCTNNNNNAGG 1 cut(s) 536
EcoRII CCWGG 1 cut(s) 28
EcoRV GATATC 1 cut(s) 106
EcoT22I ATGCAT 2 cut(s) 584, 866
FaeI CATG 7 cut(s) 199, 468, 505, 582, 586, 676, 864
FatI CATG 7 cut(s) 195, 464, 501, 578, 582, 672, 860
FauI CCCGC 1 cut(s) 341
FbaI TGATCA 1 cut(s) 849
Fnu4HI GCNGC 3 cut(s) 234, 246, 376
FokI GGATG 2 cut(s) 113, 535
Fsp4HI GCNGC 3 cut(s) 234, 246, 376
FspBI CTAG 4 cut(s) 54, 249, 455, 902
GlaI GCGC 1 cut(s) 344
GluI GCNGC 3 cut(s) 234, 246, 376
HaeIII GGCC 2 cut(s) 33, 496
HapII CCGG 2 cut(s) 98, 172
HgaI GACGC 1 cut(s) 2
HhaI GCGC 1 cut(s) 345
Hin1II CATG 7 cut(s) 199, 468, 505, 582, 586, 676, 864
Hin6I GCGC 1 cut(s) 343
HinP1I GCGC 1 cut(s) 343
HindIII AAGCTT 1 cut(s) 692
HinfI GANTC 7 cut(s) 276, 324, 486, 562, 609, 735, 877
HpaII CCGG 2 cut(s) 98, 172
HphI GGTGA 2 cut(s) 161, 319
Hpy166II GTNNAC 1 cut(s) 976
Hpy188I TCNGA 5 cut(s) 18, 431, 876, 969, 998
Hpy188III TCNNGA 5 cut(s) 206, 449, 552, 602, 853
Hpy8I GTNNAC 1 cut(s) 976
HpyAV CCTTC 4 cut(s) 119, 469, 647, 833
HpyCH4III ACNGT 1 cut(s) 973
HpyCH4V TGCA 8 cut(s) 63, 233, 285, 536, 582, 712, 783, 864
HpyF10VI GCNNNNNNNGC 2 cut(s) 242, 342
HpyF3I CTNAG 3 cut(s) 587, 806, 933
Hsp92II CATG 7 cut(s) 199, 468, 505, 582, 586, 676, 864
HspAI GCGC 1 cut(s) 343
Ksp22I TGATCA 1 cut(s) 849
Kzo9I GATC 5 cut(s) 79, 604, 849, 855, 946
Lsp1109I GCAGC 3 cut(s) 245, 257, 362
LweI GCATC 3 cut(s) 93, 216, 557
MaeI CTAG 4 cut(s) 54, 249, 455, 902
MaeIII GTNAC 2 cut(s) 23, 762
MalI GATC 5 cut(s) 81, 606, 851, 857, 948
MbiI CCGCTC 1 cut(s) 670
MboI GATC 5 cut(s) 79, 604, 849, 855, 946
MboII GAAGA 5 cut(s) 39, 190, 193, 301, 941
MflI RGATCY 2 cut(s) 855, 946
MhlI GDGCHC 1 cut(s) 814
MlsI TGGCCA 1 cut(s) 496
MluCI AATT 2 cut(s) 209, 909
MluNI TGGCCA 1 cut(s) 496
MlyI GAGTC 1 cut(s) 285
MnlI CCTC 5 cut(s) 132, 342, 367, 532, 788
Mox20I TGGCCA 1 cut(s) 496
Mph1103I ATGCAT 2 cut(s) 584, 866
MscI TGGCCA 1 cut(s) 496
MseI TTAA 5 cut(s) 381, 399, 557, 689, 791
MslI CAYNNNNRTG 1 cut(s) 629
Msp20I TGGCCA 1 cut(s) 496
MspI CCGG 2 cut(s) 98, 172
MspR9I CCNGG 1 cut(s) 30
Mva1269I GAATGC 1 cut(s) 15
MvaI CCWGG 1 cut(s) 30
MwoI GCNNNNNNNGC 2 cut(s) 242, 342
NdeII GATC 5 cut(s) 79, 604, 849, 855, 946
NlaIII CATG 7 cut(s) 199, 468, 505, 582, 586, 676, 864
NmuCI GTSAC 2 cut(s) 23, 762
NsiI ATGCAT 2 cut(s) 584, 866
NspI RCATGY 3 cut(s) 199, 468, 586
OliI CACNNNNGTG 1 cut(s) 629
PaeI GCATGC 1 cut(s) 586
PaeR7I CTCGAG 1 cut(s) 346
PciI ACATGT 2 cut(s) 195, 464
PctI GAATGC 1 cut(s) 15
PfeI GAWTC 6 cut(s) 324, 486, 562, 609, 735, 877
PinAI ACCGGT 1 cut(s) 171
PkrI GCNGC 3 cut(s) 235, 247, 377
PleI GAGTC 1 cut(s) 284
PpsI GAGTC 1 cut(s) 284
PscI ACATGT 2 cut(s) 195, 464
Psp6I CCWGG 1 cut(s) 28
PspGI CCWGG 1 cut(s) 28
PspPI GGNCC 1 cut(s) 32
PspXI VCTCGAGB 1 cut(s) 346
PsuI RGATCY 2 cut(s) 855, 946
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
RseI CAYNNNNRTG 1 cut(s) 629
SaqAI TTAA 5 cut(s) 381, 399, 557, 689, 791
SatI GCNGC 3 cut(s) 234, 246, 376
Sau3AI GATC 5 cut(s) 79, 604, 849, 855, 946
Sau96I GGNCC 1 cut(s) 32
SchI GAGTC 1 cut(s) 285
ScrFI CCNGG 1 cut(s) 30
SduI GDGCHC 1 cut(s) 814
SfaNI GCATC 3 cut(s) 93, 216, 557
Sfr274I CTCGAG 1 cut(s) 346
SgrAI CRCCGGYG 1 cut(s) 171
SlaI CTCGAG 1 cut(s) 346
SmiMI CAYNNNNRTG 1 cut(s) 629
SmlI CTYRAG 2 cut(s) 346, 938
SmoI CTYRAG 2 cut(s) 346, 938
SphI GCATGC 1 cut(s) 586
Sse9I AATT 2 cut(s) 209, 909
SsiI CCGC 4 cut(s) 67, 334, 668, 906
SspMI CTAG 4 cut(s) 54, 249, 455, 902
StyD4I CCNGG 1 cut(s) 28
TaaI ACNGT 1 cut(s) 973
TaqI TCGA 6 cut(s) 207, 347, 441, 489, 607, 750
TasI AATT 2 cut(s) 209, 909
TfiI GAWTC 6 cut(s) 324, 486, 562, 609, 735, 877
Tru1I TTAA 5 cut(s) 381, 399, 557, 689, 791
Tru9I TTAA 5 cut(s) 381, 399, 557, 689, 791
TscAI CASTG 2 cut(s) 771, 978
TseFI GTSAC 2 cut(s) 23, 762
TseI GCWGC 3 cut(s) 233, 245, 375
Tsp45I GTSAC 2 cut(s) 23, 762
TspDTI ATGAA 4 cut(s) 17, 81, 101, 567
TspRI CASTG 2 cut(s) 771, 978
XagI CCTNNNNNAGG 1 cut(s) 536
XapI RAATTY 1 cut(s) 209
XceI RCATGY 3 cut(s) 199, 468, 586
XhoI CTCGAG 1 cut(s) 346
XspI CTAG 4 cut(s) 54, 249, 455, 902
Zsp2I ATGCAT 2 cut(s) 584, 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.