FvH4_7g25361

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000084
Physical Location & Seq
Forward (+)
19386860 .. 19388577
1718 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g25361.t1

Sequence Viewer

Length: 1440 bp
ATGGTGATATCTGGTGAGCAAGAAAAACGTAGAAGAAGATGTGGGATTACCGAGTTGCCGGATTGCATTATGGAATCCATAGTCTCATTGCTACCTCTAAAAGACGCAGTGAATACTATTCTGGCTTCCCCTCCACATTGGAAGACTCTTTCTCATCCAACAATACTAACAAGGCGCAATCTTGAACTCAACTATTTCAACGTCTTCGGGAGCAAATCAAGGGGAAAAGGTCCACTGGACGGTTGTATGCAGCTGCAGCAGTGCCGCCAGTGCAGAGATTTTTCGAGACGTGTGAGTAAATATTTGCAGCAATATCAAGGTATCAAGGTCGACTCTTTCAGATTGCAATGCCGTTCTCCTGTTGATGTAGAATCTCATGTCAGTCTTGATGAATGGATTCGTTTCGCAATTAGAAAAGGGGTTGAAGAGCTTCATCTTACACTGCTTGTTCTTCCGTCTGTTTTTGTTTGTCCCTCGGTTTATGTTTTTCCTCCGAGTTTACATGTTGCCTCGACTTCAAATCTAAAACATTTGTCATTAGAGAGTTGTAAATTAAGACATGCTACTGCTGATTTTGGTCAGCTAACTACTCTTTCTCTAAGAGAAGTTGTCTTTGATCAATCTCTGATGCCAAATCTCTTCTCTGTTTGTGTGTTGCTCGAAAGCTTGACCTTAAATAGATGCCGGATTCAAGTGGGTCCTCTAGTTGCAGGTGATCGTCTAACTCATCTGAAAGTAATAGACTGTGAGGAGGGAACCAAAACGGAGATTCGGGCACTAAATCTAGCCTCCTTGGAATACATTCCATATTTCAAATGCAGCTCTTTTTATATAAAAGCTCCGCAGTTAACCAGAATTTTTTTCTCCAACAGAAGGGTAAGTGAAACCTTGGTACCTCAAGCACTGATGCAATTTGCATTGTGTCCAGGGCTTGAGACTCTTCATCTGCATATTACACCGAGATCACCCCGAAGCAGCAGCATACCAACTTATGGAAATCTCAAGCAACTCAGCTTGGATATTGACGTATCTCTAATGCAAGACATCGTCGATGTCAATTTTGTGCTCGATCTTCTCGAGGCTGCACCCTATTTGGAAGAGCTTGTAATTATACTGATATATGGAGACTGCTCTAAGCCTAATCAAAGAGAGATAAGGAACCATTCTGGATTCACAAATGATCATTTGAGAATGGTTAAGTTGCTGGGACTCAAGGGTTATTGGTACGAGACAGAGTTGGCCATTTGTATCCTAGAGATTTCACCAAAGCTAGAGATGCTGGTCATTGATGAGCTTCGGAGATTTTATTTGGGTGATGGAAAGTTCAGGCAGGTGTGCCAAAGTTATTCAGAACGGCCCTGGGGAGTTATGGAAGAAAAACTTAAGGCAGTAAAGACTGATGCTCAGATCATATTTCCCCCTAGGGAAACTTCTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FBD

Protein Analysis

480

Amino Acids

54.71

Weight (kDa)

8.4

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 102 - 448 1.3e-30 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 129 - 370 1.5e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 701, 1321
Acc36I ACCTGC 2 cut(s) 701, 1321
Acc65I GGTACC 1 cut(s) 892
AccB1I GGYRCC 1 cut(s) 892
AccB7I CCANNNNNTGG 1 cut(s) 992
AccI GTMKAC 1 cut(s) 330
AciI CCGC 2 cut(s) 265, 842
AcoI YGGCCR 1 cut(s) 1239
AcsI RAATTY 1 cut(s) 855
AfaI GTAC 2 cut(s) 894, 1226
AfiI CCNNNNNNNGG 3 cut(s) 239, 873, 992
AflII CTTAAG 1 cut(s) 1382
AflIII ACRYGT 2 cut(s) 289, 502
AgsI TTSAA 6 cut(s) 185, 199, 425, 519, 692, 814
AjiI CACGTC 1 cut(s) 290
AjnI CCWGG 2 cut(s) 925, 1358
Alw21I GWGCWC 1 cut(s) 1068
Alw26I GTCTC 5 cut(s) 88, 280, 929, 1119, 1223
Ama87I CYCGRG 1 cut(s) 1076
AoxI GGCC 2 cut(s) 1239, 1355
ApeKI GCWGC 8 cut(s) 250, 253, 256, 307, 819, 975, 978, 1082
ApoI RAATTY 1 cut(s) 855
Asp700I GAANNNNTTC 3 cut(s) 396, 429, 801
Asp718I GGTACC 1 cut(s) 892
AspA2I CCTAGG 1 cut(s) 1421
AspLEI GCGC 1 cut(s) 177
AspS9I GGNCC 3 cut(s) 230, 698, 1356
AsuHPI GGTGA 6 cut(s) 16, 26, 725, 957, 1254, 1325
AvaI CYCGRG 1 cut(s) 1076
AvaII GGWCC 2 cut(s) 230, 698
AvrII CCTAGG 1 cut(s) 1421
BaeGI GKGCMC 1 cut(s) 778
BaeI ACNNNNGTAYC 2 cut(s) 876, 909
BalI TGGCCA 1 cut(s) 1241
BanI GGYRCC 1 cut(s) 892
BbsI GAAGAC 2 cut(s) 149, 196
Bbv12I GWGCWC 1 cut(s) 1068
BbvI GCAGC 8 cut(s) 240, 262, 268, 319, 831, 987, 990, 1069
BccI CCATC 1 cut(s) 1310
BceAI ACGGC 2 cut(s) 336, 1370
BciT130I CCWGG 2 cut(s) 927, 1360
BciVI GTATCC 1 cut(s) 1259
BclI TGATCA 2 cut(s) 616, 1180
BcoDI GTCTC 5 cut(s) 88, 280, 929, 1119, 1223
BfaI CTAG 5 cut(s) 704, 785, 1253, 1271, 1422
BfmI CTRYAG 1 cut(s) 254
BfrI CTTAAG 1 cut(s) 1382
BfuAI ACCTGC 2 cut(s) 701, 1321
BfuI GTATCC 1 cut(s) 1259
BisI GCNGC 9 cut(s) 251, 254, 257, 265, 308, 820, 976, 979, 1083
BlnI CCTAGG 1 cut(s) 1421
BlsI GCNGC 9 cut(s) 252, 255, 258, 266, 309, 821, 977, 980, 1084
Bme1390I CCNGG 2 cut(s) 927, 1360
Bme18I GGWCC 2 cut(s) 230, 698
BmeT110I CYCGRG 1 cut(s) 1076
BmgBI CACGTC 1 cut(s) 290
BmgT120I GGNCC 3 cut(s) 230, 698, 1356
BmiI GGNNCC 4 cut(s) 699, 757, 894, 1160
BmrFI CCNGG 2 cut(s) 927, 1360
BmsI GCATC 5 cut(s) 618, 671, 897, 1266, 1390
BpiI GAAGAC 2 cut(s) 149, 196
BpuEI CTTGAG 4 cut(s) 882, 953, 986, 1196
BsaJI CCNNGG 7 cut(s) 474, 792, 888, 926, 1358, 1359, 1421
Bsc4I CCNNNNNNNGG 3 cut(s) 239, 873, 992
Bse1I ACTGG 2 cut(s) 240, 268
Bse3DI GCAATG 2 cut(s) 86, 353
BseBI CCWGG 2 cut(s) 927, 1360
BseDI CCNNGG 7 cut(s) 474, 792, 888, 926, 1358, 1359, 1421
BseGI GGATG 1 cut(s) 154
BseLI CCNNNNNNNGG 3 cut(s) 239, 873, 992
BseMI GCAATG 2 cut(s) 86, 353
BseMII CTCAG 2 cut(s) 1024, 1418
BseNI ACTGG 2 cut(s) 240, 268
BseRI GAGGAG 1 cut(s) 764
BseSI GKGCMC 1 cut(s) 778
BseXI GCAGC 8 cut(s) 240, 262, 268, 319, 831, 987, 990, 1069
BseYI CCCAGC 1 cut(s) 1204
BsgI GTGCAG 2 cut(s) 292, 1068
BshFI GGCC 2 cut(s) 1241, 1357
BshNI GGYRCC 1 cut(s) 892
BsiHKAI GWGCWC 1 cut(s) 1068
BsiHKCI CYCGRG 1 cut(s) 1076
BsiSI CCGG 2 cut(s) 59, 685
BslFI GGGAC 2 cut(s) 456, 1221
BslI CCNNNNNNNGG 3 cut(s) 239, 873, 992
BsmAI GTCTC 5 cut(s) 88, 280, 929, 1119, 1223
BsmBI CGTCTC 1 cut(s) 280
BsmFI GGGAC 2 cut(s) 456, 1221
BsnI GGCC 2 cut(s) 1241, 1357
BsoBI CYCGRG 1 cut(s) 1076
Bsp1286I GDGCHC 2 cut(s) 778, 1068
Bsp143I GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
BspACI CCGC 2 cut(s) 265, 842
BspANI GGCC 2 cut(s) 1241, 1357
BspCNI CTCAG 2 cut(s) 1023, 1417
BspLI GGNNCC 4 cut(s) 699, 757, 894, 1160
BspMAI CTGCAG 1 cut(s) 258
BspMI ACCTGC 2 cut(s) 701, 1321
BspQI GCTCTTC 2 cut(s) 420, 1092
BspT107I GGYRCC 1 cut(s) 892
BspTI CTTAAG 1 cut(s) 1382
BsrDI GCAATG 2 cut(s) 86, 353
BsrI ACTGG 2 cut(s) 240, 268
BssECI CCNNGG 7 cut(s) 474, 792, 888, 926, 1358, 1359, 1421
BssMI GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
BssT1I CCWWGG 3 cut(s) 792, 888, 1421
Bst2UI CCWGG 2 cut(s) 927, 1360
Bst4CI ACNGT 2 cut(s) 242, 746
Bst6I CTCTTC 4 cut(s) 420, 644, 945, 1092
BstAFI CTTAAG 1 cut(s) 1382
BstDEI CTNAG 4 cut(s) 599, 1010, 1134, 1404
BstF5I GGATG 1 cut(s) 154
BstHHI GCGC 1 cut(s) 177
BstKTI GATC 6 cut(s) 619, 718, 965, 1072, 1183, 1410
BstMAI GTCTC 5 cut(s) 88, 280, 929, 1119, 1223
BstMBI GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
BstMWI GCNNNNNNNGC 3 cut(s) 256, 270, 1276
BstNI CCWGG 2 cut(s) 927, 1360
BstNSI RCATGY 2 cut(s) 506, 563
BstSCI CCNGG 2 cut(s) 925, 1358
BstSFI CTRYAG 1 cut(s) 254
BstSLI GKGCMC 1 cut(s) 778
BstV1I GCAGC 8 cut(s) 240, 262, 268, 319, 831, 987, 990, 1069
BstV2I GAAGAC 2 cut(s) 149, 196
BsuI GTATCC 1 cut(s) 1259
BsuRI GGCC 2 cut(s) 1241, 1357
BtrI CACGTC 1 cut(s) 290
BtsCI GGATG 1 cut(s) 154
BtsI GCAGTG 3 cut(s) 114, 266, 440
BtsIMutI CAGTG 6 cut(s) 114, 233, 266, 275, 440, 902
BveI ACCTGC 2 cut(s) 701, 1321
CfoI GCGC 1 cut(s) 177
Cfr13I GGNCC 3 cut(s) 230, 698, 1356
CseI GACGC 1 cut(s) 113
Csp6I GTAC 2 cut(s) 893, 1225
CviAII CATG 3 cut(s) 377, 503, 560
CviQI GTAC 2 cut(s) 893, 1225
DdeI CTNAG 4 cut(s) 599, 1010, 1134, 1404
DpnI GATC 6 cut(s) 618, 717, 964, 1071, 1182, 1409
DpnII GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
EaeI YGGCCR 1 cut(s) 1239
Eam1104I CTCTTC 4 cut(s) 420, 644, 945, 1092
EarI CTCTTC 4 cut(s) 420, 644, 945, 1092
Eco130I CCWWGG 3 cut(s) 792, 888, 1421
Eco32I GATATC 1 cut(s) 9
Eco47I GGWCC 2 cut(s) 230, 698
Eco88I CYCGRG 1 cut(s) 1076
EcoO109I RGGNCCY 1 cut(s) 698
EcoRII CCWGG 2 cut(s) 925, 1358
EcoRV GATATC 1 cut(s) 9
EcoT14I CCWWGG 3 cut(s) 792, 888, 1421
ErhI CCWWGG 3 cut(s) 792, 888, 1421
Esp3I CGTCTC 1 cut(s) 280
FaeI CATG 3 cut(s) 380, 506, 563
FalI AAGNNNNNCTT 2 cut(s) 1365, 1397
FaqI GGGAC 2 cut(s) 456, 1221
FatI CATG 3 cut(s) 376, 502, 559
FbaI TGATCA 2 cut(s) 616, 1180
FblI GTMKAC 1 cut(s) 330
Fnu4HI GCNGC 9 cut(s) 251, 254, 257, 265, 308, 820, 976, 979, 1083
FokI GGATG 1 cut(s) 141
Fsp4HI GCNGC 9 cut(s) 251, 254, 257, 265, 308, 820, 976, 979, 1083
FspBI CTAG 5 cut(s) 704, 785, 1253, 1271, 1422
GlaI GCGC 1 cut(s) 176
GluI GCNGC 9 cut(s) 251, 254, 257, 265, 308, 820, 976, 979, 1083
GsaI CCCAGC 1 cut(s) 1208
HaeIII GGCC 2 cut(s) 1241, 1357
HapII CCGG 2 cut(s) 59, 685
HgaI GACGC 1 cut(s) 113
HhaI GCGC 1 cut(s) 177
Hin1II CATG 3 cut(s) 380, 506, 563
Hin6I GCGC 1 cut(s) 175
HinP1I GCGC 1 cut(s) 175
HincII GTYRAC 2 cut(s) 331, 849
HindII GTYRAC 2 cut(s) 331, 849
HindIII AAGCTT 1 cut(s) 664
HpaI GTTAAC 1 cut(s) 849
HpaII CCGG 2 cut(s) 59, 685
HphI GGTGA 6 cut(s) 16, 26, 725, 957, 1254, 1325
Hpy166II GTNNAC 4 cut(s) 233, 331, 500, 849
Hpy188I TCNGA 7 cut(s) 341, 495, 627, 732, 1299, 1351, 1407
Hpy188III TCNNGA 6 cut(s) 182, 208, 285, 386, 1076, 1167
Hpy8I GTNNAC 4 cut(s) 233, 331, 500, 849
Hpy99I CGWCG 1 cut(s) 1052
HpyAV CCTTC 1 cut(s) 867
HpyCH4III ACNGT 2 cut(s) 242, 746
HpyCH4IV ACGT 4 cut(s) 28, 201, 289, 1026
HpyF10VI GCNNNNNNNGC 3 cut(s) 256, 270, 1276
HpyF3I CTNAG 4 cut(s) 599, 1010, 1134, 1404
HpySE526I ACGT 4 cut(s) 28, 201, 289, 1026
Hsp92II CATG 3 cut(s) 380, 506, 563
HspAI GCGC 1 cut(s) 175
KpnI GGTACC 1 cut(s) 896
Ksp22I TGATCA 2 cut(s) 616, 1180
KspAI GTTAAC 1 cut(s) 849
Kzo9I GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
LguI GCTCTTC 2 cut(s) 420, 1092
LmnI GCTCC 2 cut(s) 210, 844
Lsp1109I GCAGC 8 cut(s) 240, 262, 268, 319, 831, 987, 990, 1069
LweI GCATC 5 cut(s) 618, 671, 897, 1266, 1390
MaeI CTAG 5 cut(s) 704, 785, 1253, 1271, 1422
MaeII ACGT 4 cut(s) 28, 201, 289, 1026
MalI GATC 6 cut(s) 618, 717, 964, 1071, 1182, 1409
MboI GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
MhlI GDGCHC 2 cut(s) 778, 1068
MlsI TGGCCA 1 cut(s) 1241
MluCI AATT 6 cut(s) 408, 551, 855, 911, 1057, 1107
MluNI TGGCCA 1 cut(s) 1241
MlyI GAGTC 4 cut(s) 139, 326, 931, 1203
MmeI TCCRAC 2 cut(s) 182, 891
Mox20I TGGCCA 1 cut(s) 1241
MroXI GAANNNNTTC 3 cut(s) 396, 429, 801
MscI TGGCCA 1 cut(s) 1241
MseI TTAA 5 cut(s) 554, 674, 848, 1197, 1383
Msp20I TGGCCA 1 cut(s) 1241
MspA1I CMGCKG 1 cut(s) 253
MspCI CTTAAG 1 cut(s) 1382
MspI CCGG 2 cut(s) 59, 685
MspR9I CCNGG 2 cut(s) 927, 1360
MvaI CCWGG 2 cut(s) 927, 1360
MwoI GCNNNNNNNGC 3 cut(s) 256, 270, 1276
NdeII GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
NlaIII CATG 3 cut(s) 380, 506, 563
NlaIV GGNNCC 4 cut(s) 699, 757, 894, 1160
NspI RCATGY 2 cut(s) 506, 563
PaeR7I CTCGAG 1 cut(s) 1076
PaqCI CACCTGC 2 cut(s) 701, 1321
PasI CCCWGGG 1 cut(s) 1359
PciI ACATGT 1 cut(s) 502
PciSI GCTCTTC 2 cut(s) 420, 1092
PcsI WCGNNNNNNNCGW 1 cut(s) 1074
PdmI GAANNNNTTC 3 cut(s) 396, 429, 801
PfeI GAWTC 6 cut(s) 74, 371, 397, 688, 769, 1170
PflFI GACNNNGTC 1 cut(s) 1046
PflMI CCANNNNNTGG 1 cut(s) 992
PkrI GCNGC 9 cut(s) 252, 255, 258, 266, 309, 821, 977, 980, 1084
PleI GAGTC 4 cut(s) 139, 326, 931, 1203
PpsI GAGTC 4 cut(s) 139, 326, 931, 1203
PpuMI RGGWCCY 1 cut(s) 698
PscI ACATGT 1 cut(s) 502
Psp5II RGGWCCY 1 cut(s) 698
Psp6I CCWGG 2 cut(s) 925, 1358
PspFI CCCAGC 1 cut(s) 1204
PspGI CCWGG 2 cut(s) 925, 1358
PspN4I GGNNCC 4 cut(s) 699, 757, 894, 1160
PspPI GGNCC 3 cut(s) 230, 698, 1356
PspPPI RGGWCCY 1 cut(s) 698
PstI CTGCAG 1 cut(s) 258
PsyI GACNNNGTC 1 cut(s) 1046
PvuII CAGCTG 1 cut(s) 253
RsaI GTAC 2 cut(s) 894, 1226
RsaNI GTAC 2 cut(s) 893, 1225
SalI GTCGAC 1 cut(s) 329
SapI GCTCTTC 2 cut(s) 420, 1092
SaqAI TTAA 5 cut(s) 554, 674, 848, 1197, 1383
SatI GCNGC 9 cut(s) 251, 254, 257, 265, 308, 820, 976, 979, 1083
Sau3AI GATC 6 cut(s) 616, 715, 962, 1069, 1180, 1407
Sau96I GGNCC 3 cut(s) 230, 698, 1356
SchI GAGTC 4 cut(s) 139, 326, 931, 1203
ScrFI CCNGG 2 cut(s) 927, 1360
SduI GDGCHC 2 cut(s) 778, 1068
SfaNI GCATC 5 cut(s) 618, 671, 897, 1266, 1390
SfcI CTRYAG 1 cut(s) 254
Sfr274I CTCGAG 1 cut(s) 1076
SinI GGWCC 2 cut(s) 230, 698
SlaI CTCGAG 1 cut(s) 1076
SmlI CTYRAG 6 cut(s) 897, 932, 1001, 1076, 1211, 1382
SmoI CTYRAG 6 cut(s) 897, 932, 1001, 1076, 1211, 1382
Sse9I AATT 6 cut(s) 408, 551, 855, 911, 1057, 1107
SsiI CCGC 2 cut(s) 265, 842
SspI AATATT 1 cut(s) 302
SspMI CTAG 5 cut(s) 704, 785, 1253, 1271, 1422
StyD4I CCNGG 2 cut(s) 925, 1358
StyI CCWWGG 3 cut(s) 792, 888, 1421
TaaI ACNGT 2 cut(s) 242, 746
TaiI ACGT 4 cut(s) 31, 204, 292, 1029
TaqI TCGA 7 cut(s) 284, 330, 512, 660, 1050, 1068, 1077
TasI AATT 6 cut(s) 408, 551, 855, 911, 1057, 1107
TauI GCSGC 1 cut(s) 267
TfiI GAWTC 6 cut(s) 74, 371, 397, 688, 769, 1170
Tru1I TTAA 5 cut(s) 554, 674, 848, 1197, 1383
Tru9I TTAA 5 cut(s) 554, 674, 848, 1197, 1383
TscAI CASTG 6 cut(s) 114, 240, 266, 275, 447, 909
TseI GCWGC 8 cut(s) 250, 253, 256, 307, 819, 975, 978, 1082
TspDTI ATGAA 3 cut(s) 405, 422, 932
TspGWI ACGGA 2 cut(s) 444, 779
TspRI CASTG 6 cut(s) 114, 240, 266, 275, 447, 909
Tth111I GACNNNGTC 1 cut(s) 1046
Van91I CCANNNNNTGG 1 cut(s) 992
Vha464I CTTAAG 1 cut(s) 1382
VpaK11BI GGWCC 2 cut(s) 230, 698
XapI RAATTY 1 cut(s) 855
XceI RCATGY 2 cut(s) 506, 563
XhoI CTCGAG 1 cut(s) 1076
XmaJI CCTAGG 1 cut(s) 1421
XmiI GTMKAC 1 cut(s) 330
XmnI GAANNNNTTC 3 cut(s) 396, 429, 801
XspI CTAG 5 cut(s) 704, 785, 1253, 1271, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.