Rmu_sc0001665.1_g000048

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001665.1
OG0000084
Physical Location & Seq
Reverse (-)
212424 .. 215641
3218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001665.1_g000048.1.cds

Sequence Viewer

Length: 1764 bp
atggatggatcgtatgaaccttcaatatctgatattggtttggtgtcccaaagttcgataaatggaagtgactgtaatgaaatgcaatataagggagttagatatgataagttgtctacagaagatcttaaagggcagatgtttaagactgtggaggaagctgagtccttttacaatgcttatgcaaaggccatgggttttgatgttagaaacgactacaagagattaagtatacgcacaacagggagagtcacttcattgcggttggtttgttctgctcaagggaaaagaagagaagagtacatgagtaacaagaaaagagttcgcaggccaaagaaagaaacaagattcagttgtccatgcttgttcaaagtaaggtaccgttcgaatattaatgcctatattgttgatgatttcataacgaaccactcacatcagcttgcacaagcacatgagtcacatcttcttcgatcacacagatcagttgaagatcatcatttagcactggctacatctatgcagagagtgtctgttaagccttgtcatacatatgaatacattgttgatagatcaggaggttttaagaatgtcgggaggccgccacagtttgaaaaacgtgtggatacatatttgcagctgtataaaggtgacaaggtcgactctttcacagtggagttcactgatcaagaaggtggcgacgtccttgaccgatggatccgtttcgcaattacaaagggagttgaagaacttcatcttcgacatcacgtttttgattatgttttccctcactggttactttctgaacaagtaaacgcaggctcaagagttaatctaaaagttctgtcaatatgtagcattgatggtattttacgacctcctcctgattttagcggattcaatcagctaaagactcttcatctaattcatgctatcatcgatccaagttttacgtcaaatctcttttctgtctttgtgtccctcgaaagcttgaccttatatcgctgcaggcttggtcgatatcttgctaatactagaactgatctgaatattgttgccggtgatcgtctaactgaactgatagtcatggattgcggcccagccaaaatcaaaatttctgcacaaaatctcgcctccttggaatatattaataatcattggacctctctttctatcaaaactccgcgtttagcaagaatttatttgccagacactgttcacgatccattgttacctcatgttctaacacaatttgcgacgtgttctgagctcgactctctttttctgcggatgtacccggaaaccctaatcaatttcagcatgccagcttttggaaatttgaggaaattgaaggtggatatctgcatcgaatatggtcgtccatacaatgatgacaatcttcttcgctttctggattttctcaaggctgcacccgttttggaagagcttgtaacagctttgattgacctcaagtttactgacactactgatgaacgagagataaggaatgtttctggatttacacatgataacttgaaattagttaagataaagagtttccacggtcactggtccgaaatagagtttgcgatttgtattctcaagtacacaacaaatctcaagataatggaaattgggcctttcgcaagaagcgtttctggtgactactttcgggagaaggtgaattatccagaacgacctagggcaattatgaaaaaaaaaatcaaggaagtaaagaccgatgctcaaattatatttctaccataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

587

Amino Acids

67.61

Weight (kDa)

8.81

Isoelectric Point (pI)

35.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 702
Acc65I GGTACC 1 cut(s) 378
AccB1I GGYRCC 1 cut(s) 378
AccB7I CCANNNNNTGG 1 cut(s) 1328
AccI GTMKAC 3 cut(s) 116, 232, 657
AccII CGCG 1 cut(s) 1183
AciI CCGC 6 cut(s) 262, 599, 891, 1092, 1181, 1285
AclWI GGATC 5 cut(s) 16, 709, 722, 932, 1214
AcsI RAATTY 3 cut(s) 1110, 1194, 1333
AcyI GRCGYC 1 cut(s) 699
AfaI GTAC 4 cut(s) 302, 380, 1292, 1604
AfiI CCNNNNNNNGG 1 cut(s) 1328
AflIII ACRYGT 2 cut(s) 616, 1256
AgsI TTSAA 8 cut(s) 24, 370, 488, 611, 743, 898, 1348, 1534
AjiI CACGTC 1 cut(s) 1257
AluBI AGCT 9 cut(s) 161, 439, 637, 904, 987, 1267, 1325, 1444, 1454
AluI AGCT 9 cut(s) 161, 439, 637, 904, 987, 1267, 1325, 1444, 1454
Alw21I GWGCWC 1 cut(s) 1269
AlwI GGATC 5 cut(s) 16, 709, 722, 932, 1214
AlwNI CAGNNNCTG 1 cut(s) 1211
AoxI GGCC 5 cut(s) 189, 329, 596, 1093, 1634
ApeKI GCWGC 3 cut(s) 634, 1002, 1424
ApoI RAATTY 3 cut(s) 1110, 1194, 1333
AseI ATTAAT 2 cut(s) 393, 1146
Asp700I GAANNNNTTC 2 cut(s) 747, 1651
Asp718I GGTACC 1 cut(s) 378
AspA2I CCTAGG 1 cut(s) 1697
AspS9I GGNCC 4 cut(s) 1094, 1158, 1569, 1634
AsuC2I CCSGG 1 cut(s) 1295
AsuHPI GGTGA 4 cut(s) 659, 1070, 1670, 1690
AsuII TTCGAA 1 cut(s) 386
AvaII GGWCC 2 cut(s) 1158, 1569
AvrII CCTAGG 1 cut(s) 1697
BamHI GGATCC 1 cut(s) 714
BanI GGYRCC 1 cut(s) 378
BanII GRGCYC 1 cut(s) 1269
Bbv12I GWGCWC 1 cut(s) 1269
BbvI GCAGC 3 cut(s) 646, 989, 1411
BccI CCATC 2 cut(s) 705, 854
BciVI GTATCC 1 cut(s) 616
BclI TGATCA 1 cut(s) 682
BcnI CCSGG 1 cut(s) 1295
BfaI CTAG 2 cut(s) 1032, 1698
BfmI CTRYAG 2 cut(s) 117, 1003
BfuI GTATCC 1 cut(s) 616
BglII AGATCT 1 cut(s) 124
BisI GCNGC 5 cut(s) 599, 635, 1003, 1093, 1425
BlnI CCTAGG 1 cut(s) 1697
BlsI GCNGC 5 cut(s) 600, 636, 1004, 1094, 1426
Bme1390I CCNGG 1 cut(s) 1295
Bme18I GGWCC 2 cut(s) 1158, 1569
BmgBI CACGTC 1 cut(s) 1257
BmgT120I GGNCC 4 cut(s) 1094, 1158, 1569, 1634
BmiI GGNNCC 2 cut(s) 380, 716
BmrFI CCNGG 1 cut(s) 1295
BmsI GCATC 2 cut(s) 1371, 1729
BplI GAGNNNNNCTC 2 cut(s) 1256, 1288
Bpu14I TTCGAA 1 cut(s) 386
BpuEI CTTGAG 6 cut(s) 264, 805, 1403, 1451, 1583, 1601
BpuMI CCSGG 1 cut(s) 1295
Bsa29I ATCGAT 1 cut(s) 936
BsaBI GATNNNNATC 1 cut(s) 1392
BsaHI GRCGYC 1 cut(s) 699
BsaJI CCNNGG 4 cut(s) 192, 1134, 1558, 1697
Bsc4I CCNNNNNNNGG 1 cut(s) 1328
Bse118I RCCGGY 1 cut(s) 1055
Bse1I ACTGG 3 cut(s) 510, 794, 1571
Bse3DI GCAATG 1 cut(s) 257
Bse8I GATNNNNATC 1 cut(s) 1392
BseCI ATCGAT 1 cut(s) 936
BseDI CCNNGG 4 cut(s) 192, 1134, 1558, 1697
BseGI GGATG 2 cut(s) 10, 1293
BseJI GATNNNNATC 1 cut(s) 1392
BseLI CCNNNNNNNGG 1 cut(s) 1328
BseMI GCAATG 1 cut(s) 257
BseMII CTCAG 2 cut(s) 153, 1254
BseNI ACTGG 3 cut(s) 510, 794, 1571
BseRI GAGGAG 1 cut(s) 867
BseXI GCAGC 3 cut(s) 646, 989, 1411
BseYI CCCAGC 1 cut(s) 1096
BsgI GTGCAG 2 cut(s) 1101, 1410
Bsh1236I CGCG 1 cut(s) 1183
BshFI GGCC 5 cut(s) 191, 331, 598, 1095, 1636
BshNI GGYRCC 1 cut(s) 378
BshVI ATCGAT 1 cut(s) 936
BsiHKAI GWGCWC 1 cut(s) 1269
BsiSI CCGG 2 cut(s) 1056, 1295
BslFI GGGAC 2 cut(s) 31, 961
BslI CCNNNNNNNGG 1 cut(s) 1328
BsmFI GGGAC 2 cut(s) 31, 961
BsnI GGCC 5 cut(s) 191, 331, 598, 1095, 1636
Bsp119I TTCGAA 1 cut(s) 386
Bsp1286I GDGCHC 1 cut(s) 1269
Bsp19I CCATGG 1 cut(s) 192
BspACI CCGC 6 cut(s) 262, 599, 891, 1092, 1181, 1285
BspANI GGCC 5 cut(s) 191, 331, 598, 1095, 1636
BspCNI CTCAG 2 cut(s) 154, 1255
BspDI ATCGAT 1 cut(s) 936
BspFNI CGCG 1 cut(s) 1183
BspLI GGNNCC 2 cut(s) 380, 716
BspMAI CTGCAG 1 cut(s) 1007
BspPI GGATC 5 cut(s) 16, 709, 722, 932, 1214
BspQI GCTCTTC 1 cut(s) 1434
BspT104I TTCGAA 1 cut(s) 386
BspT107I GGYRCC 1 cut(s) 378
BsrDI GCAATG 1 cut(s) 257
BsrFI RCCGGY 1 cut(s) 1055
BsrI ACTGG 3 cut(s) 510, 794, 1571
BssAI RCCGGY 1 cut(s) 1055
BssECI CCNNGG 4 cut(s) 192, 1134, 1558, 1697
BssNAI GTATAC 1 cut(s) 233
BssNI GRCGYC 1 cut(s) 699
BssT1I CCWWGG 3 cut(s) 192, 1134, 1697
Bst1107I GTATAC 1 cut(s) 233
Bst4CI ACNGT 7 cut(s) 74, 151, 383, 606, 670, 1213, 1562
Bst6I CTCTTC 4 cut(s) 286, 291, 918, 1434
BstACI GRCGYC 1 cut(s) 699
BstBI TTCGAA 1 cut(s) 386
BstC8I GCNNGC 6 cut(s) 329, 441, 817, 1007, 1319, 1323
BstDEI CTNAG 2 cut(s) 162, 1263
BstDSI CCRYGG 2 cut(s) 192, 1558
BstF5I GGATG 2 cut(s) 10, 1293
BstFNI CGCG 1 cut(s) 1183
BstNSI RCATGY 1 cut(s) 1321
BstSCI CCNGG 1 cut(s) 1293
BstSFI CTRYAG 2 cut(s) 117, 1003
BstUI CGCG 1 cut(s) 1183
BstV1I GCAGC 3 cut(s) 646, 989, 1411
BstX2I RGATCY 2 cut(s) 124, 714
BstYI RGATCY 2 cut(s) 124, 714
BstZ17I GTATAC 1 cut(s) 233
Bsu15I ATCGAT 1 cut(s) 936
BsuI GTATCC 1 cut(s) 616
BsuRI GGCC 5 cut(s) 191, 331, 598, 1095, 1636
BsuTUI ATCGAT 1 cut(s) 936
BtgI CCRYGG 2 cut(s) 192, 1558
BtrI CACGTC 1 cut(s) 1257
BtsCI GGATG 2 cut(s) 10, 1293
BtsIMutI CAGTG 6 cut(s) 503, 675, 678, 787, 1209, 1564
Cac8I GCNNGC 6 cut(s) 329, 441, 817, 1007, 1319, 1323
CaiI CAGNNNCTG 1 cut(s) 1211
Cfr10I RCCGGY 1 cut(s) 1055
Cfr13I GGNCC 4 cut(s) 1094, 1158, 1569, 1634
ClaI ATCGAT 1 cut(s) 936
Csp6I GTAC 4 cut(s) 301, 379, 1291, 1603
CviAII CATG 9 cut(s) 193, 304, 360, 452, 926, 1084, 1235, 1318, 1523
CviQI GTAC 4 cut(s) 301, 379, 1291, 1603
DdeI CTNAG 2 cut(s) 162, 1263
Eam1104I CTCTTC 4 cut(s) 286, 291, 918, 1434
EarI CTCTTC 4 cut(s) 286, 291, 918, 1434
Ecl136II GAGCTC 1 cut(s) 1267
Eco130I CCWWGG 3 cut(s) 192, 1134, 1697
Eco24I GRGCYC 1 cut(s) 1269
Eco32I GATATC 2 cut(s) 1019, 1357
Eco47I GGWCC 2 cut(s) 1158, 1569
Eco53kI GAGCTC 1 cut(s) 1267
EcoICRI GAGCTC 1 cut(s) 1267
EcoRV GATATC 2 cut(s) 1019, 1357
EcoT14I CCWWGG 3 cut(s) 192, 1134, 1697
EcoT38I GRGCYC 1 cut(s) 1269
ErhI CCWWGG 3 cut(s) 192, 1134, 1697
FaeI CATG 9 cut(s) 196, 307, 363, 455, 929, 1087, 1238, 1321, 1526
FaqI GGGAC 2 cut(s) 31, 961
FatI CATG 9 cut(s) 192, 303, 359, 451, 925, 1083, 1234, 1317, 1522
FauNDI CATATG 1 cut(s) 550
FbaI TGATCA 1 cut(s) 682
FblI GTMKAC 3 cut(s) 116, 232, 657
Fnu4HI GCNGC 5 cut(s) 599, 635, 1003, 1093, 1425
FokI GGATG 2 cut(s) 17, 1300
FriOI GRGCYC 1 cut(s) 1269
Fsp4HI GCNGC 5 cut(s) 599, 635, 1003, 1093, 1425
FspBI CTAG 2 cut(s) 1032, 1698
GluI GCNGC 5 cut(s) 599, 635, 1003, 1093, 1425
GsaI CCCAGC 1 cut(s) 1100
HaeIII GGCC 5 cut(s) 191, 331, 598, 1095, 1636
HapII CCGG 2 cut(s) 1056, 1295
Hin1I GRCGYC 1 cut(s) 699
Hin1II CATG 9 cut(s) 196, 307, 363, 455, 929, 1087, 1238, 1321, 1526
HincII GTYRAC 1 cut(s) 658
HindII GTYRAC 1 cut(s) 658
HindIII AAGCTT 1 cut(s) 985
HinfI GANTC 8 cut(s) 164, 249, 348, 455, 659, 894, 910, 1271
HpaII CCGG 2 cut(s) 1056, 1295
HphI GGTGA 4 cut(s) 659, 1070, 1670, 1690
Hpy166II GTNNAC 8 cut(s) 117, 233, 658, 678, 811, 1216, 1473, 1605
Hpy188I TCNGA 5 cut(s) 31, 802, 1044, 1264, 1573
Hpy8I GTNNAC 8 cut(s) 117, 233, 658, 678, 811, 1216, 1473, 1605
Hpy99I CGWCG 2 cut(s) 701, 1258
HpyAV CCTTC 4 cut(s) 30, 683, 1342, 1669
HpyCH4III ACNGT 7 cut(s) 74, 151, 383, 606, 670, 1213, 1562
HpyCH4IV ACGT 5 cut(s) 616, 699, 765, 950, 1256
HpyCH4V TGCA 9 cut(s) 85, 185, 443, 520, 634, 1005, 1118, 1362, 1427
HpyF3I CTNAG 2 cut(s) 162, 1263
HpySE526I ACGT 5 cut(s) 616, 699, 765, 950, 1256
Hsp92I GRCGYC 1 cut(s) 699
Hsp92II CATG 9 cut(s) 196, 307, 363, 455, 929, 1087, 1238, 1321, 1526
KpnI GGTACC 1 cut(s) 382
Ksp22I TGATCA 1 cut(s) 682
LguI GCTCTTC 1 cut(s) 1434
Lsp1109I GCAGC 3 cut(s) 646, 989, 1411
LweI GCATC 2 cut(s) 1371, 1729
MaeI CTAG 2 cut(s) 1032, 1698
MaeII ACGT 5 cut(s) 616, 699, 765, 950, 1256
MflI RGATCY 2 cut(s) 124, 714
MhlI GDGCHC 1 cut(s) 1269
MlyI GAGTC 6 cut(s) 173, 258, 464, 653, 904, 1265
MroXI GAANNNNTTC 2 cut(s) 747, 1651
MseI TTAA 9 cut(s) 129, 144, 227, 393, 534, 582, 828, 1146, 1542
MslI CAYNNNNRTG 1 cut(s) 549
MspA1I CMGCKG 1 cut(s) 637
MspI CCGG 2 cut(s) 1056, 1295
MspR9I CCNGG 1 cut(s) 1295
MvnI CGCG 1 cut(s) 1183
NciI CCSGG 1 cut(s) 1295
NcoI CCATGG 1 cut(s) 192
NdeI CATATG 1 cut(s) 550
NlaIII CATG 9 cut(s) 196, 307, 363, 455, 929, 1087, 1238, 1321, 1526
NlaIV GGNNCC 2 cut(s) 380, 716
NmuCI GTSAC 6 cut(s) 68, 250, 456, 647, 1562, 1658
NspI RCATGY 1 cut(s) 1321
NspV TTCGAA 1 cut(s) 386
PaeI GCATGC 1 cut(s) 1321
PciSI GCTCTTC 1 cut(s) 1434
PcsI WCGNNNNNNNCGW 1 cut(s) 1647
PdmI GAANNNNTTC 2 cut(s) 747, 1651
PfeI GAWTC 2 cut(s) 348, 894
PflFI GACNNNGTC 1 cut(s) 653
PflMI CCANNNNNTGG 1 cut(s) 1328
PkrI GCNGC 5 cut(s) 600, 636, 1004, 1094, 1426
PleI GAGTC 6 cut(s) 172, 257, 463, 653, 904, 1265
PpsI GAGTC 6 cut(s) 172, 257, 463, 653, 904, 1265
PshBI ATTAAT 2 cut(s) 393, 1146
Psp124BI GAGCTC 1 cut(s) 1269
PspFI CCCAGC 1 cut(s) 1096
PspN4I GGNNCC 2 cut(s) 380, 716
PspPI GGNCC 4 cut(s) 1094, 1158, 1569, 1634
PstI CTGCAG 1 cut(s) 1007
PstNI CAGNNNCTG 1 cut(s) 1211
PsuI RGATCY 2 cut(s) 124, 714
PsyI GACNNNGTC 1 cut(s) 653
PvuII CAGCTG 1 cut(s) 637
RsaI GTAC 4 cut(s) 302, 380, 1292, 1604
RsaNI GTAC 4 cut(s) 301, 379, 1291, 1603
RseI CAYNNNNRTG 1 cut(s) 549
SacI GAGCTC 1 cut(s) 1269
SalI GTCGAC 1 cut(s) 656
SapI GCTCTTC 1 cut(s) 1434
SaqAI TTAA 9 cut(s) 129, 144, 227, 393, 534, 582, 828, 1146, 1542
SatI GCNGC 5 cut(s) 599, 635, 1003, 1093, 1425
Sau96I GGNCC 4 cut(s) 1094, 1158, 1569, 1634
SchI GAGTC 6 cut(s) 173, 258, 464, 653, 904, 1265
ScrFI CCNGG 1 cut(s) 1295
SduI GDGCHC 1 cut(s) 1269
SfaNI GCATC 2 cut(s) 1371, 1729
SfcI CTRYAG 2 cut(s) 117, 1003
SfuI TTCGAA 1 cut(s) 386
SinI GGWCC 2 cut(s) 1158, 1569
SmiMI CAYNNNNRTG 1 cut(s) 549
SmlI CTYRAG 6 cut(s) 279, 820, 1418, 1466, 1598, 1616
SmoI CTYRAG 6 cut(s) 279, 820, 1418, 1466, 1598, 1616
SphI GCATGC 1 cut(s) 1321
SsiI CCGC 6 cut(s) 262, 599, 891, 1092, 1181, 1285
SspI AATATT 2 cut(s) 391, 1048
SspMI CTAG 2 cut(s) 1032, 1698
SstI GAGCTC 1 cut(s) 1269
StyD4I CCNGG 1 cut(s) 1293
StyI CCWWGG 3 cut(s) 192, 1134, 1697
TaaI ACNGT 7 cut(s) 74, 151, 383, 606, 670, 1213, 1562
TaiI ACGT 5 cut(s) 619, 702, 768, 953, 1259
TaqII GACCGA 2 cut(s) 723, 1751
TatI WGTACW 2 cut(s) 300, 1602
TauI GCSGC 2 cut(s) 601, 1095
TfiI GAWTC 2 cut(s) 348, 894
Tru1I TTAA 9 cut(s) 129, 144, 227, 393, 534, 582, 828, 1146, 1542
Tru9I TTAA 9 cut(s) 129, 144, 227, 393, 534, 582, 828, 1146, 1542
TscAI CASTG 6 cut(s) 510, 675, 685, 794, 1216, 1571
TseFI GTSAC 6 cut(s) 68, 250, 456, 647, 1562, 1658
TseI GCWGC 3 cut(s) 634, 1002, 1424
Tsp45I GTSAC 6 cut(s) 68, 250, 456, 647, 1562, 1658
TspGWI ACGGA 1 cut(s) 707
TspRI CASTG 6 cut(s) 510, 675, 685, 794, 1216, 1571
Tth111I GACNNNGTC 1 cut(s) 653
Van91I CCANNNNNTGG 1 cut(s) 1328
VpaK11BI GGWCC 2 cut(s) 1158, 1569
VspI ATTAAT 2 cut(s) 393, 1146
XapI RAATTY 3 cut(s) 1110, 1194, 1333
XceI RCATGY 1 cut(s) 1321
XmaJI CCTAGG 1 cut(s) 1697
XmiI GTMKAC 3 cut(s) 116, 232, 657
XmnI GAANNNNTTC 2 cut(s) 747, 1651
XspI CTAG 2 cut(s) 1032, 1698
ZraI GACGTC 1 cut(s) 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.