Rh2CG582100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000084
Physical Location & Seq
Reverse (-)
76046811 .. 76049426
2616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG582100.1

Sequence Viewer

Length: 1836 bp
ATGATGAGCATCTTCTGTCCTCCCCCATTTGCTATAGAAGTCCACAAGACCACAAGCAATGTGTTTGTGAAAGGGTATGTTATAGAAAGGGTGAAAAAGAAAAGACACAGAATAAAAAAAAAGAAGATTGAAAGTCTTATTATAAACCCAGTGGGGCTTGTAAAAGATTATTCCTTGGATATGGACCGCAATGAAATAATAGCTGTGGTTGAGGAAGACAGTAAGGATTGGGTTAATAAATTTCCGGATTGCATTCTGTCATACATACTTTCTAGTTTAAGAATAAAAGATGCAGTGGATACCTGCTTGATATCCCGGGGATGGAGGGACCTTTGGAAGGGTCCAAGGCCCAATCTGGAATTTGACATTCCAAACATTTTTGGAAGCAAGTATGCCAGGCTCATTGAGAAACATGAAGAAAAGGATAGACTTCCTTTTTTGGTTGATAGATTCGACAGACAATGCTTTGTAAGACGCGTGAATAAACTTTTGGAGCTCTACTCTGGAAACAAGGTAGAGTCTCTCAGAGTGGCATTCTTTTTTGATGTAGAATCTACGGCCATACTTGATAAGTGGATTCGTTTTGCAATTGCGAAGGGAGCTAAAGTTCTCGACCTTCACTTATTGAATAGCACACATTGGGACTATGCAGAATTTTACGTTTTTCCCCACTGGATCCTTTCAGAGTTGAATAATGCAGCAGCCCTAAAGCATTTGTCGCTGCACAGATGTGTTCTAAAACCGCCTACTGATTTTAACAGATTGGCTCAGCTAACAACTCTTTGTCTAAACAAGGTCTTCGTTGATCCAGGATTTTTGGAACATCTGTTCTCGATTTGTGTGCTCCTTGAAGGCTTGACGTTGATAAAATGCAGGGTGCGACTCTCAAATCTGATTATTGGTCCATCGTGTCACCTCAGGGATCTGAAGGTGCTCGAGTGCGATGAATTACTGAAAATAGAAATTGACGCAGTAAATCTTTCCTTCTTTGAATATGATGGAATTATTTTTGACATTTCTTGCATGAGAACTCCACAGCTTGTAAGATTCTTTTTTAGGGGATTCAGTGGTATCTATGGATTACCTTATGTGTTCACCCTACTCGCTTTGTGTCCTGCCCTTGAGAGTCTTCATCTGCAGTCGTTTACTGAACTGGAAAATATACCAGAAACAGTTCCAACATTTTCAAACCTCAAGCATGTGAGCTTGGATCTCTTTAATTCAGATTTTGACCTTGGGAGATTAGTGAGTTTTCTCAAGGATGCACCTCTTTTGGAAGAACTCGTATTAACGACACGAGCTTATAGCTATCGAGGAGAGATGAGGAATCTTTCTGCATTCTCACATAATCATTTAAGAAAAGTGAAAATGCAGGGGTTCCAAGGCAAGCGGTTAGAGATAGAGTTGGCCATTTGCATTCTTAAATTTGCAACAAAGCTTGAGGTAATGGTGATCGATCCACTAGGAAAACACTACCACGGCTGTGGAAGGTGGACCAATTACGATTGTTCTTATTATCAGGAGGGGAATGAGGACGAGAGTGAGGATGTGGACTCTGAGGAAGGGAGAGAGGATGAGAACAAGACCGAAGAAGGGACACAGCATGAAAACGAGGAGGACAATGAGGTTGAGGAAGGGAGTGAGCATGAGAACAAGAACGAGGATGAGAATGAGGATGACGATGAAGGGGTGGAGGCTCGGGAATTAAGCGAGGGTGAAGACGAGGACAAAGATGAAGACAAGCCTTGGATTTTCCATTGGGAAAGAAGAGGTAGGGCAGTTGTCCAACAAAAGCTGAAAGAAGTAAAGACTGATGCTCAAGTCATCATCCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

611

Amino Acids

70.96

Weight (kDa)

5.29

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 167 - 507 9.7e-51 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 189 - 315 4e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 143
Acc36I ACCTGC 1 cut(s) 311
AccII CGCG 1 cut(s) 477
AccIII TCCGGA 1 cut(s) 244
AciI CCGC 3 cut(s) 187, 743, 1390
AclWI GGATC 6 cut(s) 670, 683, 800, 930, 1218, 1451
AcoI YGGCCR 2 cut(s) 558, 1407
AcsI RAATTY 4 cut(s) 239, 359, 653, 1424
AcuI CTGAAG 1 cut(s) 947
AfiI CCNNNNNNNGG 3 cut(s) 321, 337, 1593
AflIII ACRYGT 1 cut(s) 475
AgsI TTSAA 6 cut(s) 131, 628, 691, 851, 992, 1188
AjnI CCWGG 2 cut(s) 395, 808
AjuI GAANNNNNNNTTGG 2 cut(s) 473, 505
AleI CACNNNNGTG 2 cut(s) 729, 1482
AloI GAACNNNNNNTCC 4 cut(s) 591, 623, 812, 844
Alw21I GWGCWC 3 cut(s) 498, 846, 936
Alw26I GTCTC 1 cut(s) 525
AlwI GGATC 6 cut(s) 670, 683, 800, 930, 1218, 1451
Ama87I CYCGRG 3 cut(s) 315, 935, 1698
Aor13HI TCCGGA 1 cut(s) 244
AoxI GGCC 3 cut(s) 347, 558, 1407
ApeKI GCWGC 3 cut(s) 698, 701, 721
ApoI RAATTY 4 cut(s) 239, 359, 653, 1424
Asp700I GAANNNNTTC 1 cut(s) 1173
AspS9I GGNCC 6 cut(s) 184, 328, 341, 348, 902, 1494
AsuC2I CCSGG 2 cut(s) 316, 317
AsuHPI GGTGA 5 cut(s) 103, 905, 1087, 1462, 1727
AvaI CYCGRG 3 cut(s) 315, 935, 1698
AvaII GGWCC 5 cut(s) 184, 328, 341, 902, 1494
AxyI CCTNAGG 1 cut(s) 917
BalI TGGCCA 1 cut(s) 1409
BamHI GGATCC 1 cut(s) 675
BanII GRGCYC 1 cut(s) 498
BauI CACGAG 1 cut(s) 1296
BbsI GAAGAC 5 cut(s) 222, 790, 1121, 1725, 1743
Bbv12I GWGCWC 3 cut(s) 498, 846, 936
BbvI GCAGC 3 cut(s) 708, 710, 713
BccI CCATC 3 cut(s) 315, 913, 992
BceAI ACGGC 2 cut(s) 573, 1495
BcgI CGANNNNNNTGC 2 cut(s) 823, 857
BciT130I CCWGG 2 cut(s) 397, 810
BciVI GTATCC 1 cut(s) 292
BcnI CCSGG 2 cut(s) 316, 317
BcoDI GTCTC 1 cut(s) 525
BfaI CTAG 2 cut(s) 273, 1463
BfmI CTRYAG 2 cut(s) 33, 1136
BfuAI ACCTGC 1 cut(s) 311
BfuI GTATCC 1 cut(s) 292
BisI GCNGC 3 cut(s) 699, 702, 722
BlpI GCTNAGC 1 cut(s) 768
BlsI GCNGC 3 cut(s) 700, 703, 723
Bme1390I CCNGG 4 cut(s) 316, 317, 397, 810
Bme18I GGWCC 5 cut(s) 184, 328, 341, 902, 1494
BmeT110I CYCGRG 3 cut(s) 315, 935, 1698
BmgT120I GGNCC 6 cut(s) 184, 328, 341, 348, 902, 1494
BmiI GGNNCC 4 cut(s) 329, 342, 677, 1379
BmrFI CCNGG 4 cut(s) 316, 317, 397, 810
BmrI ACTGGG 1 cut(s) 143
BmsI GCATC 4 cut(s) 18, 280, 1252, 1804
BmuI ACTGGG 1 cut(s) 143
BpiI GAAGAC 5 cut(s) 222, 790, 1121, 1725, 1743
BplI GAGNNNNNCTC 2 cut(s) 485, 517
Bpu1102I GCTNAGC 1 cut(s) 768
BpuEI CTTGAG 5 cut(s) 1142, 1178, 1241, 1460, 1803
BpuMI CCSGG 2 cut(s) 316, 317
Bsa29I ATCGAT 1 cut(s) 1455
BsaBI GATNNNNATC 1 cut(s) 8
BsaJI CCNNGG 8 cut(s) 174, 315, 316, 344, 1234, 1381, 1477, 1745
BsaWI WCCGGW 1 cut(s) 244
BsaXI ACNNNNNCTCC 2 cut(s) 591, 621
Bsc4I CCNNNNNNNGG 3 cut(s) 321, 337, 1593
Bse1I ACTGG 3 cut(s) 149, 677, 1158
Bse21I CCTNAGG 1 cut(s) 917
Bse3DI GCAATG 2 cut(s) 64, 196
Bse8I GATNNNNATC 1 cut(s) 8
BseAI TCCGGA 1 cut(s) 244
BseBI CCWGG 2 cut(s) 397, 810
BseCI ATCGAT 1 cut(s) 1455
BseDI CCNNGG 8 cut(s) 174, 315, 316, 344, 1234, 1381, 1477, 1745
BseGI GGATG 7 cut(s) 326, 1267, 1552, 1579, 1669, 1681, 1827
BseJI GATNNNNATC 1 cut(s) 8
BseLI CCNNNNNNNGG 3 cut(s) 321, 337, 1593
BseMI GCAATG 2 cut(s) 64, 196
BseMII CTCAG 4 cut(s) 538, 782, 931, 1548
BseNI ACTGG 3 cut(s) 149, 677, 1158
BseRI GAGGAG 2 cut(s) 1329, 1628
BseXI GCAGC 3 cut(s) 708, 710, 713
BsgI GTGCAG 1 cut(s) 707
Bsh1236I CGCG 1 cut(s) 477
BshFI GGCC 3 cut(s) 349, 560, 1409
BshVI ATCGAT 1 cut(s) 1455
BsiHKAI GWGCWC 3 cut(s) 498, 846, 936
BsiHKCI CYCGRG 3 cut(s) 315, 935, 1698
BsiSI CCGG 2 cut(s) 245, 316
BslFI GGGAC 3 cut(s) 341, 656, 1609
BslI CCNNNNNNNGG 3 cut(s) 321, 337, 1593
BsmAI GTCTC 1 cut(s) 525
BsmFI GGGAC 3 cut(s) 341, 656, 1609
BsmI GAATGC 4 cut(s) 252, 533, 1337, 1416
BsnI GGCC 3 cut(s) 349, 560, 1409
BsoBI CYCGRG 3 cut(s) 315, 935, 1698
Bsp1286I GDGCHC 3 cut(s) 498, 846, 936
Bsp13I TCCGGA 1 cut(s) 244
Bsp143I GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
Bsp1720I GCTNAGC 1 cut(s) 768
BspACI CCGC 3 cut(s) 187, 743, 1390
BspANI GGCC 3 cut(s) 349, 560, 1409
BspCNI CTCAG 4 cut(s) 537, 781, 930, 1549
BspDI ATCGAT 1 cut(s) 1455
BspEI TCCGGA 1 cut(s) 244
BspFNI CGCG 1 cut(s) 477
BspLI GGNNCC 4 cut(s) 329, 342, 677, 1379
BspMAI CTGCAG 1 cut(s) 1140
BspMI ACCTGC 1 cut(s) 311
BspPI GGATC 6 cut(s) 670, 683, 800, 930, 1218, 1451
BsrDI GCAATG 2 cut(s) 64, 196
BsrI ACTGG 3 cut(s) 149, 677, 1158
BssECI CCNNGG 8 cut(s) 174, 315, 316, 344, 1234, 1381, 1477, 1745
BssMI GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
BssSI CACGAG 1 cut(s) 1296
BssT1I CCWWGG 5 cut(s) 174, 344, 1234, 1381, 1745
Bst2BI CACGAG 1 cut(s) 1296
Bst2UI CCWGG 2 cut(s) 397, 810
Bst4CI ACNGT 2 cut(s) 221, 1174
Bst6I CTCTTC 1 cut(s) 1762
BstC8I GCNNGC 1 cut(s) 1388
BstDEI CTNAG 4 cut(s) 524, 768, 917, 1557
BstDSI CCRYGG 1 cut(s) 1477
BstENI CCTNNNNNAGG 1 cut(s) 335
BstF5I GGATG 7 cut(s) 326, 1267, 1552, 1579, 1669, 1681, 1827
BstFNI CGCG 1 cut(s) 477
BstKTI GATC 6 cut(s) 678, 808, 925, 1213, 1455, 1459
BstMAI GTCTC 1 cut(s) 525
BstMBI GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
BstMWI GCNNNNNNNGC 2 cut(s) 599, 718
BstNI CCWGG 2 cut(s) 397, 810
BstNSI RCATGY 1 cut(s) 1202
BstSCI CCNGG 4 cut(s) 314, 315, 395, 808
BstSFI CTRYAG 2 cut(s) 33, 1136
BstUI CGCG 1 cut(s) 477
BstV1I GCAGC 3 cut(s) 708, 710, 713
BstV2I GAAGAC 5 cut(s) 222, 790, 1121, 1725, 1743
BstX2I RGATCY 3 cut(s) 675, 922, 1210
BstXI CCANNNNNNTGG 1 cut(s) 1484
BstYI RGATCY 3 cut(s) 675, 922, 1210
Bsu15I ATCGAT 1 cut(s) 1455
Bsu36I CCTNAGG 1 cut(s) 917
BsuI GTATCC 1 cut(s) 292
BsuRI GGCC 3 cut(s) 349, 560, 1409
BsuTUI ATCGAT 1 cut(s) 1455
BtgI CCRYGG 1 cut(s) 1477
BtgZI GCGATG 1 cut(s) 957
BtsCI GGATG 7 cut(s) 326, 1267, 1552, 1579, 1669, 1681, 1827
BtsI GCAGTG 1 cut(s) 300
BtsIMutI CAGTG 4 cut(s) 156, 300, 670, 1072
BveI ACCTGC 1 cut(s) 311
Cac8I GCNNGC 1 cut(s) 1388
Cfr13I GGNCC 6 cut(s) 184, 328, 341, 348, 902, 1494
Cfr9I CCCGGG 1 cut(s) 315
ClaI ATCGAT 1 cut(s) 1455
CseI GACGC 2 cut(s) 483, 977
CviAII CATG 5 cut(s) 413, 1024, 1199, 1604, 1646
DdeI CTNAG 4 cut(s) 524, 768, 917, 1557
DpnI GATC 6 cut(s) 677, 807, 924, 1212, 1454, 1458
DpnII GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
EaeI YGGCCR 2 cut(s) 558, 1407
Eam1104I CTCTTC 1 cut(s) 1762
EarI CTCTTC 1 cut(s) 1762
Ecl136II GAGCTC 1 cut(s) 496
Eco130I CCWWGG 5 cut(s) 174, 344, 1234, 1381, 1745
Eco24I GRGCYC 1 cut(s) 498
Eco32I GATATC 1 cut(s) 312
Eco47I GGWCC 5 cut(s) 184, 328, 341, 902, 1494
Eco53kI GAGCTC 1 cut(s) 496
Eco57I CTGAAG 1 cut(s) 947
Eco81I CCTNAGG 1 cut(s) 917
Eco88I CYCGRG 3 cut(s) 315, 935, 1698
EcoICRI GAGCTC 1 cut(s) 496
EcoNI CCTNNNNNAGG 1 cut(s) 335
EcoO109I RGGNCCY 1 cut(s) 328
EcoRII CCWGG 2 cut(s) 395, 808
EcoRV GATATC 1 cut(s) 312
EcoT14I CCWWGG 5 cut(s) 174, 344, 1234, 1381, 1745
EcoT38I GRGCYC 1 cut(s) 498
ErhI CCWWGG 5 cut(s) 174, 344, 1234, 1381, 1745
FaeI CATG 5 cut(s) 416, 1027, 1202, 1607, 1649
FaqI GGGAC 3 cut(s) 341, 656, 1609
FatI CATG 5 cut(s) 412, 1023, 1198, 1603, 1645
Fnu4HI GCNGC 3 cut(s) 699, 702, 722
FokI GGATG 7 cut(s) 333, 1274, 1559, 1586, 1676, 1688, 1814
FriOI GRGCYC 1 cut(s) 498
Fsp4HI GCNGC 3 cut(s) 699, 702, 722
FspBI CTAG 2 cut(s) 273, 1463
GluI GCNGC 3 cut(s) 699, 702, 722
HaeIII GGCC 3 cut(s) 349, 560, 1409
HapII CCGG 2 cut(s) 245, 316
HgaI GACGC 2 cut(s) 483, 977
Hin1II CATG 5 cut(s) 416, 1027, 1202, 1607, 1649
HindIII AAGCTT 1 cut(s) 1436
HpaII CCGG 2 cut(s) 245, 316
HphI GGTGA 5 cut(s) 103, 905, 1087, 1462, 1727
Hpy166II GTNNAC 5 cut(s) 43, 1095, 1146, 1494, 1552
Hpy188I TCNGA 6 cut(s) 527, 685, 894, 927, 1225, 1558
Hpy188III TCNNGA 7 cut(s) 245, 356, 504, 611, 832, 1520, 1700
Hpy8I GTNNAC 5 cut(s) 43, 1095, 1146, 1494, 1552
HpyCH4III ACNGT 2 cut(s) 221, 1174
HpyCH4IV ACGT 2 cut(s) 660, 860
HpyF10VI GCNNNNNNNGC 2 cut(s) 599, 718
HpyF3I CTNAG 4 cut(s) 524, 768, 917, 1557
HpySE526I ACGT 2 cut(s) 660, 860
Hsp92II CATG 5 cut(s) 416, 1027, 1202, 1607, 1649
Kpn2I TCCGGA 1 cut(s) 244
Kzo9I GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
LmnI GCTCC 3 cut(s) 493, 599, 849
Lsp1109I GCAGC 3 cut(s) 708, 710, 713
LweI GCATC 4 cut(s) 18, 280, 1252, 1804
MaeI CTAG 2 cut(s) 273, 1463
MaeII ACGT 2 cut(s) 660, 860
MaeIII GTNAC 1 cut(s) 911
MalI GATC 6 cut(s) 677, 807, 924, 1212, 1454, 1458
MboI GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
MfeI CAATTG 1 cut(s) 588
MflI RGATCY 3 cut(s) 675, 922, 1210
MhlI GDGCHC 3 cut(s) 498, 846, 936
MlsI TGGCCA 1 cut(s) 1409
MluI ACGCGT 1 cut(s) 475
MluNI TGGCCA 1 cut(s) 1409
MlyI GAGTC 4 cut(s) 527, 876, 1135, 1547
MmeI TCCRAC 2 cut(s) 1202, 1810
Mox20I TGGCCA 1 cut(s) 1409
MroI TCCGGA 1 cut(s) 244
MroXI GAANNNNTTC 1 cut(s) 1173
MscI TGGCCA 1 cut(s) 1409
MseI TTAA 8 cut(s) 234, 278, 756, 1218, 1289, 1355, 1422, 1706
MslI CAYNNNNRTG 2 cut(s) 729, 1482
Msp20I TGGCCA 1 cut(s) 1409
MspI CCGG 2 cut(s) 245, 316
MspR9I CCNGG 4 cut(s) 316, 317, 397, 810
MunI CAATTG 1 cut(s) 588
Mva1269I GAATGC 4 cut(s) 252, 533, 1337, 1416
MvaI CCWGG 2 cut(s) 397, 810
MvnI CGCG 1 cut(s) 477
MwoI GCNNNNNNNGC 2 cut(s) 599, 718
NciI CCSGG 2 cut(s) 316, 317
NdeII GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
NlaIII CATG 5 cut(s) 416, 1027, 1202, 1607, 1649
NlaIV GGNNCC 4 cut(s) 329, 342, 677, 1379
NmuCI GTSAC 1 cut(s) 911
NspI RCATGY 1 cut(s) 1202
OliI CACNNNNGTG 2 cut(s) 729, 1482
PaeR7I CTCGAG 1 cut(s) 935
PctI GAATGC 4 cut(s) 252, 533, 1337, 1416
PdmI GAANNNNTTC 1 cut(s) 1173
PfeI GAWTC 6 cut(s) 450, 551, 577, 1047, 1062, 1327
PfoI TCCNGGA 1 cut(s) 808
PkrI GCNGC 3 cut(s) 700, 703, 723
PleI GAGTC 4 cut(s) 526, 876, 1134, 1547
PpsI GAGTC 4 cut(s) 526, 876, 1134, 1547
PpuMI RGGWCCY 1 cut(s) 328
PsiI TTATAA 1 cut(s) 143
Psp124BI GAGCTC 1 cut(s) 498
Psp5II RGGWCCY 1 cut(s) 328
Psp6I CCWGG 2 cut(s) 395, 808
PspGI CCWGG 2 cut(s) 395, 808
PspN4I GGNNCC 4 cut(s) 329, 342, 677, 1379
PspPI GGNCC 6 cut(s) 184, 328, 341, 348, 902, 1494
PspPPI RGGWCCY 1 cut(s) 328
PspXI VCTCGAGB 1 cut(s) 935
PstI CTGCAG 1 cut(s) 1140
PsuI RGATCY 3 cut(s) 675, 922, 1210
RseI CAYNNNNRTG 2 cut(s) 729, 1482
SacI GAGCTC 1 cut(s) 498
SaqAI TTAA 8 cut(s) 234, 278, 756, 1218, 1289, 1355, 1422, 1706
SatI GCNGC 3 cut(s) 699, 702, 722
Sau3AI GATC 6 cut(s) 675, 805, 922, 1210, 1452, 1456
Sau96I GGNCC 6 cut(s) 184, 328, 341, 348, 902, 1494
SchI GAGTC 4 cut(s) 527, 876, 1135, 1547
ScrFI CCNGG 4 cut(s) 316, 317, 397, 810
SduI GDGCHC 3 cut(s) 498, 846, 936
SfaNI GCATC 4 cut(s) 18, 280, 1252, 1804
SfcI CTRYAG 2 cut(s) 33, 1136
Sfr274I CTCGAG 1 cut(s) 935
SinI GGWCC 5 cut(s) 184, 328, 341, 902, 1494
SlaI CTCGAG 1 cut(s) 935
SmaI CCCGGG 1 cut(s) 317
SmiMI CAYNNNNRTG 2 cut(s) 729, 1482
SmlI CTYRAG 6 cut(s) 935, 1121, 1193, 1256, 1439, 1818
SmoI CTYRAG 6 cut(s) 935, 1121, 1193, 1256, 1439, 1818
SsiI CCGC 3 cut(s) 187, 743, 1390
SspMI CTAG 2 cut(s) 273, 1463
SstI GAGCTC 1 cut(s) 498
StyD4I CCNGG 4 cut(s) 314, 315, 395, 808
StyI CCWWGG 5 cut(s) 174, 344, 1234, 1381, 1745
TaaI ACNGT 2 cut(s) 221, 1174
TaiI ACGT 2 cut(s) 663, 863
TaqI TCGA 6 cut(s) 453, 612, 833, 936, 1312, 1455
TaqII GACCGA 1 cut(s) 1601
TfiI GAWTC 6 cut(s) 450, 551, 577, 1047, 1062, 1327
Tru1I TTAA 8 cut(s) 234, 278, 756, 1218, 1289, 1355, 1422, 1706
Tru9I TTAA 8 cut(s) 234, 278, 756, 1218, 1289, 1355, 1422, 1706
TscAI CASTG 4 cut(s) 156, 300, 677, 1072
TseFI GTSAC 1 cut(s) 911
TseI GCWGC 3 cut(s) 698, 701, 721
Tsp45I GTSAC 1 cut(s) 911
TspDTI ATGAA 7 cut(s) 207, 429, 960, 1121, 1620, 1698, 1749
TspMI CCCGGG 1 cut(s) 315
TspRI CASTG 4 cut(s) 156, 300, 677, 1072
VpaK11BI GGWCC 5 cut(s) 184, 328, 341, 902, 1494
XagI CCTNNNNNAGG 1 cut(s) 335
XapI RAATTY 4 cut(s) 239, 359, 653, 1424
XceI RCATGY 1 cut(s) 1202
XhoI CTCGAG 1 cut(s) 935
XmaI CCCGGG 1 cut(s) 315
XmnI GAANNNNTTC 1 cut(s) 1173
XspI CTAG 2 cut(s) 273, 1463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.