RLG00000021759

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000084
Physical Location & Seq
Reverse (-)
78015816 .. 78021297
5482 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021759

Sequence Viewer

Length: 1995 bp
ATGGTACGGTACCTTTGGTCTCTGTCTGGTTTTAGAGGTCGGAGTTTTCGAGGAGGGAGAGAAACGACGTCGTTGAGAGTGGAGGGGGGAAATAACGGTCATGGTATAAAGCGAAGTGTGGGGCTGGAAGCGAGTGGAGGAGAAGGGAGGGAGTTTCTCATACGGAGTAGCAGTGAGGACGCCTGGGTTGAGGAAGACAGTAAGGATTGGGTTAATAAATTTCCGGATTGCATTCTGTCATACATACTTTCTATTTTAAGAATAAAAGATGCAGTGGATACCTGCTTGATATCCCGGGGATGGAGGGACCTTTGGAAGGGTCCAATACTGACAAGGCCCAATCTGGAATTTGACATTCCAAACATTTTTGGAAGCAAGTATGCCAGGCTCATTGAGAAACATGAAGAAAAGGATAGACTTCCTTTTTTGGTTGATAGATTCGACAGACAATGCTTTGTAAGACGTGTGAATAAACTTTTGGAGCTCTACTCTGGAAACAAGGTAGAGTCTCTCAGAGTGGCATTCTTTTTTGATGTAGAATCTACGGCCATACTTGATAAGTGGATTCGTTTTGCAATTGCAAAGGGAGCTAAAGTTCTCGACCTTCACTTATTAAATAGCACACATTGGGACTATGCAGAATTTTACGTTTTTCCCCACTGGATCCTTTCAGAGTTGAATAATGCATCAGCCCTAAAGCATTTGTCGCTGCACAGATGTGTTCTAAAACCGCCTACTGATTTCAACAGATTGACTCAGCTAACAACTCTTTGTCTAAACAAGGTCTTCGTTGATCCAGGATTTTTGGAACATCTGTTCTCGATTTGTGTGCTCCTTGAAGGCTTGACGTTGATAAAATGCAGGGTGCGACTCTCAAATCTGATTATTGGTCCATCGTGTCACCTCAGGGATCTGAAGGTGCTCGAGTGCGATGAATTACTGAAAATAGAAATTGACGCAGTAAATCTTTCCTTCTTTGAATATGATGGAATTATTTTTGACATTTCTTGCATGAAAACTCCACATCTAGTAAGATTCTTTTTTAGGGGATTCAGTGGTATCTATGGATTACCTTATGCGTTCACCTTACTCGCCTTGTGTCCTGCCCTTGAGACTCTTCATCTGCAGTTGTTTACTGAACTGGAAAATATCCCCCAAACAGTTCCAACGTTTGGCAACCTCAAGCAAATGAACTTGGATCTCTTCCCGCCAAACTTTGACCTTTCGAGTGTTCTAAATATTCTGAAGGCTGCACCTCTTATGGAAGAATTTATAATTACGGTACGATCATCAGACTATGAAGGAGAGATGAGGAATATATCCGGATTCTCACATAATTGTTTGAAAAAAGTAAAGATGCAGGGGTTCCAAGGGAAGTGGTTGGAGATAGAATTGGCCATTTGCATTCTTAAAATAGCAACAAAGCTTGAGGTAATGGTGATTGATCCACTTGGCAAATTCTACAAGGGTGGTGGAAGTTGGATCGATTTTGATTGTAGTTATTATGTCGAGGGAAACGAGGACAAGGATGAGGATGTAGAACCTCATGAAGAAATGAGCAATGGGAACGAGGACAGGGATGAGGGAGTAGATCTTGAGGAAGCAACTGAGACCTGTCATAAGGAAGTGGGTGTTGAGGGAGGGAGGGAGTACAACAATGAGATTGTCAATGAGGATGGGGGAGTGGATGTTGAAGAAGGGAGTGAGCATGAGAATGAGGATGAGAGTTTGGACGCTCGAGAAATGAACAAGGACAAAGATGAGAATGACAACAATGAGATTGTCAATGGGGATGGGGGAGTGGATGTTGAAGAAGGGCGTGAGAACGAGGATGAGAGTTTGGATGCTCGAGAAATGAACAAGGACAAAGATGAGAATGACGACAAGGATGATGAGAAAACTTATGAACTTCTCCATTGGCAGAGAAGAGGGAGGGCTGTTGTCCAAGAAAGACTTGAGGAAATAAAGACTCATGCTCAAGTCATAATCCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

665

Amino Acids

76.14

Weight (kDa)

4.85

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 163 - 484 2e-48 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 185 - 311 2e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1274
AatII GACGTC 1 cut(s) 71
Acc36I ACCTGC 1 cut(s) 290
Acc65I GGTACC 1 cut(s) 9
AccB1I GGYRCC 1 cut(s) 9
AccB7I CCANNNNNTGG 1 cut(s) 1172
AccIII TCCGGA 2 cut(s) 223, 1322
AciI CCGC 2 cut(s) 731, 1208
AclI AACGTT 1 cut(s) 1169
AclWI GGATC 7 cut(s) 658, 671, 788, 918, 1206, 1439, 1490
AcoI YGGCCR 2 cut(s) 546, 1395
AcsI RAATTY 5 cut(s) 218, 347, 641, 1268, 1457
AcuI CTGAAG 2 cut(s) 935, 1265
AcyI GRCGYC 2 cut(s) 68, 180
AfaI GTAC 4 cut(s) 6, 11, 1284, 1652
AfiI CCNNNNNNNGG 3 cut(s) 300, 316, 1172
AflIII ACRYGT 1 cut(s) 463
AgsI TTSAA 7 cut(s) 679, 745, 839, 980, 1345, 1694, 1811
AjiI CACGTC 1 cut(s) 464
AjnI CCWGG 3 cut(s) 182, 383, 796
AjuI GAANNNNNNNTTGG 2 cut(s) 461, 493
AleI CACNNNNGTG 1 cut(s) 717
AloI GAACNNNNNNTCC 4 cut(s) 579, 611, 800, 832
AluBI AGCT 4 cut(s) 484, 590, 760, 1426
AluI AGCT 4 cut(s) 484, 590, 760, 1426
Alw21I GWGCWC 3 cut(s) 486, 834, 924
Alw26I GTCTC 4 cut(s) 24, 513, 1106, 1604
AlwI GGATC 7 cut(s) 658, 671, 788, 918, 1206, 1439, 1490
Ama87I CYCGRG 4 cut(s) 294, 923, 1737, 1848
Aor13HI TCCGGA 2 cut(s) 223, 1322
AoxI GGCC 3 cut(s) 335, 546, 1395
ApeKI GCWGC 2 cut(s) 709, 1250
ApoI RAATTY 5 cut(s) 218, 347, 641, 1268, 1457
Asp718I GGTACC 1 cut(s) 9
AspS9I GGNCC 4 cut(s) 307, 320, 336, 890
AsuC2I CCSGG 2 cut(s) 295, 296
AsuHPI GGTGA 3 cut(s) 893, 1075, 1450
AvaI CYCGRG 4 cut(s) 294, 923, 1737, 1848
AvaII GGWCC 3 cut(s) 307, 320, 890
AxyI CCTNAGG 1 cut(s) 905
BalI TGGCCA 1 cut(s) 1397
BamHI GGATCC 1 cut(s) 663
BanI GGYRCC 1 cut(s) 9
BanII GRGCYC 1 cut(s) 486
BbsI GAAGAC 2 cut(s) 201, 778
Bbv12I GWGCWC 3 cut(s) 486, 834, 924
BbvI GCAGC 2 cut(s) 696, 1237
BccI CCATC 5 cut(s) 294, 901, 980, 1670, 1787
BceAI ACGGC 1 cut(s) 561
BcgI CGANNNNNNTGC 2 cut(s) 811, 845
BciT130I CCWGG 3 cut(s) 184, 385, 798
BciVI GTATCC 1 cut(s) 271
BcnI CCSGG 2 cut(s) 295, 296
BcoDI GTCTC 4 cut(s) 24, 513, 1106, 1604
BfaI CTAG 1 cut(s) 1028
BfmI CTRYAG 2 cut(s) 1124, 1991
BfuAI ACCTGC 1 cut(s) 290
BfuI GTATCC 1 cut(s) 271
BglII AGATCT 1 cut(s) 1591
BisI GCNGC 2 cut(s) 710, 1251
BlsI GCNGC 2 cut(s) 711, 1252
Bme1390I CCNGG 5 cut(s) 184, 295, 296, 385, 798
Bme18I GGWCC 3 cut(s) 307, 320, 890
BmeT110I CYCGRG 4 cut(s) 294, 923, 1737, 1848
BmgBI CACGTC 1 cut(s) 464
BmgT120I GGNCC 4 cut(s) 307, 320, 336, 890
BmiI GGNNCC 5 cut(s) 11, 308, 321, 665, 1367
BmrFI CCNGG 5 cut(s) 184, 295, 296, 385, 798
BmsI GCATC 4 cut(s) 259, 695, 1347, 1834
BpiI GAAGAC 2 cut(s) 201, 778
BplI GAGNNNNNCTC 2 cut(s) 473, 505
BpuEI CTTGAG 6 cut(s) 1130, 1166, 1448, 1616, 1962, 1976
BpuMI CCSGG 2 cut(s) 295, 296
Bsa29I ATCGAT 1 cut(s) 1485
BsaHI GRCGYC 2 cut(s) 68, 180
BsaI GGTCTC 2 cut(s) 24, 1604
BsaJI CCNNGG 4 cut(s) 183, 294, 295, 1369
BsaWI WCCGGW 2 cut(s) 223, 1322
BsaXI ACNNNNNCTCC 8 cut(s) 157, 187, 579, 609, 1674, 1704, 1791, 1821
Bsc4I CCNNNNNNNGG 3 cut(s) 300, 316, 1172
Bse1I ACTGG 2 cut(s) 665, 1146
Bse21I CCTNAGG 1 cut(s) 905
Bse3DI GCAATG 1 cut(s) 1567
BseAI TCCGGA 2 cut(s) 223, 1322
BseBI CCWGG 3 cut(s) 184, 385, 798
BseCI ATCGAT 1 cut(s) 1485
BseDI CCNNGG 4 cut(s) 183, 294, 295, 1369
BseLI CCNNNNNNNGG 3 cut(s) 300, 316, 1172
BseMI GCAATG 1 cut(s) 1567
BseMII CTCAG 4 cut(s) 526, 770, 919, 1599
BseNI ACTGG 2 cut(s) 665, 1146
BseRI GAGGAG 2 cut(s) 66, 153
BseXI GCAGC 2 cut(s) 696, 1237
BsgI GTGCAG 2 cut(s) 695, 1236
BshFI GGCC 3 cut(s) 337, 548, 1397
BshNI GGYRCC 1 cut(s) 9
BshVI ATCGAT 1 cut(s) 1485
BsiHKAI GWGCWC 3 cut(s) 486, 834, 924
BsiHKCI CYCGRG 4 cut(s) 294, 923, 1737, 1848
BsiSI CCGG 3 cut(s) 224, 295, 1323
BslFI GGGAC 2 cut(s) 320, 644
BslI CCNNNNNNNGG 3 cut(s) 300, 316, 1172
BsmAI GTCTC 4 cut(s) 24, 513, 1106, 1604
BsmFI GGGAC 2 cut(s) 320, 644
BsmI GAATGC 3 cut(s) 231, 521, 1404
BsnI GGCC 3 cut(s) 337, 548, 1397
Bso31I GGTCTC 2 cut(s) 24, 1604
BsoBI CYCGRG 4 cut(s) 294, 923, 1737, 1848
Bsp1286I GDGCHC 3 cut(s) 486, 834, 924
Bsp13I TCCGGA 2 cut(s) 223, 1322
Bsp143I GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
BspACI CCGC 2 cut(s) 731, 1208
BspANI GGCC 3 cut(s) 337, 548, 1397
BspCNI CTCAG 4 cut(s) 525, 769, 918, 1600
BspDI ATCGAT 1 cut(s) 1485
BspEI TCCGGA 2 cut(s) 223, 1322
BspHI TCATGA 1 cut(s) 1546
BspLI GGNNCC 5 cut(s) 11, 308, 321, 665, 1367
BspMAI CTGCAG 1 cut(s) 1128
BspMI ACCTGC 1 cut(s) 290
BspPI GGATC 7 cut(s) 658, 671, 788, 918, 1206, 1439, 1490
BspT107I GGYRCC 1 cut(s) 9
BspTNI GGTCTC 2 cut(s) 24, 1604
BsrDI GCAATG 1 cut(s) 1567
BsrI ACTGG 2 cut(s) 665, 1146
BssECI CCNNGG 4 cut(s) 183, 294, 295, 1369
BssMI GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
BssNI GRCGYC 2 cut(s) 68, 180
BssT1I CCWWGG 1 cut(s) 1369
Bst2UI CCWGG 3 cut(s) 184, 385, 798
Bst4CI ACNGT 5 cut(s) 9, 98, 200, 1162, 1282
Bst6I CTCTTC 3 cut(s) 1122, 1208, 1921
BstACI GRCGYC 2 cut(s) 68, 180
BstDEI CTNAG 4 cut(s) 512, 756, 905, 1608
BstENI CCTNNNNNAGG 1 cut(s) 314
BstKTI GATC 8 cut(s) 666, 796, 913, 1201, 1289, 1447, 1485, 1594
BstMAI GTCTC 4 cut(s) 24, 513, 1106, 1604
BstMBI GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
BstMWI GCNNNNNNNGC 2 cut(s) 587, 706
BstNI CCWGG 3 cut(s) 184, 385, 798
BstSCI CCNGG 5 cut(s) 182, 293, 294, 383, 796
BstSFI CTRYAG 2 cut(s) 1124, 1991
BstV1I GCAGC 2 cut(s) 696, 1237
BstV2I GAAGAC 2 cut(s) 201, 778
BstX2I RGATCY 4 cut(s) 663, 910, 1198, 1591
BstYI RGATCY 4 cut(s) 663, 910, 1198, 1591
Bsu15I ATCGAT 1 cut(s) 1485
Bsu36I CCTNAGG 1 cut(s) 905
BsuI GTATCC 1 cut(s) 271
BsuRI GGCC 3 cut(s) 337, 548, 1397
BsuTUI ATCGAT 1 cut(s) 1485
BtgZI GCGATG 1 cut(s) 945
BtrI CACGTC 1 cut(s) 464
BtsI GCAGTG 2 cut(s) 178, 279
BtsIMutI CAGTG 4 cut(s) 178, 279, 658, 1060
BveI ACCTGC 1 cut(s) 290
CciI TCATGA 1 cut(s) 1546
Cfr13I GGNCC 4 cut(s) 307, 320, 336, 890
Cfr9I CCCGGG 1 cut(s) 294
ClaI ATCGAT 1 cut(s) 1485
CseI GACGC 3 cut(s) 188, 965, 1742
Csp6I GTAC 4 cut(s) 5, 10, 1283, 1651
CspCI CAANNNNNGTGG 4 cut(s) 1358, 1393, 1453, 1488
CviAII CATG 6 cut(s) 101, 401, 1012, 1547, 1709, 1973
CviQI GTAC 4 cut(s) 5, 10, 1283, 1651
DdeI CTNAG 4 cut(s) 512, 756, 905, 1608
DpnI GATC 8 cut(s) 665, 795, 912, 1200, 1288, 1446, 1484, 1593
DpnII GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
EaeI YGGCCR 2 cut(s) 546, 1395
Eam1104I CTCTTC 3 cut(s) 1122, 1208, 1921
EarI CTCTTC 3 cut(s) 1122, 1208, 1921
Ecl136II GAGCTC 1 cut(s) 484
Eco130I CCWWGG 1 cut(s) 1369
Eco24I GRGCYC 1 cut(s) 486
Eco31I GGTCTC 2 cut(s) 24, 1604
Eco32I GATATC 1 cut(s) 291
Eco47I GGWCC 3 cut(s) 307, 320, 890
Eco53kI GAGCTC 1 cut(s) 484
Eco57I CTGAAG 2 cut(s) 935, 1265
Eco81I CCTNAGG 1 cut(s) 905
Eco88I CYCGRG 4 cut(s) 294, 923, 1737, 1848
EcoICRI GAGCTC 1 cut(s) 484
EcoNI CCTNNNNNAGG 1 cut(s) 314
EcoO109I RGGNCCY 1 cut(s) 307
EcoRII CCWGG 3 cut(s) 182, 383, 796
EcoRV GATATC 1 cut(s) 291
EcoT14I CCWWGG 1 cut(s) 1369
EcoT22I ATGCAT 1 cut(s) 688
EcoT38I GRGCYC 1 cut(s) 486
ErhI CCWWGG 1 cut(s) 1369
FaeI CATG 6 cut(s) 104, 404, 1015, 1550, 1712, 1976
FalI AAGNNNNNCTT 2 cut(s) 1938, 1970
FaqI GGGAC 2 cut(s) 320, 644
FatI CATG 6 cut(s) 100, 400, 1011, 1546, 1708, 1972
FauI CCCGC 1 cut(s) 1215
Fnu4HI GCNGC 2 cut(s) 710, 1251
FriOI GRGCYC 1 cut(s) 486
Fsp4HI GCNGC 2 cut(s) 710, 1251
FspBI CTAG 1 cut(s) 1028
GluI GCNGC 2 cut(s) 710, 1251
HaeIII GGCC 3 cut(s) 337, 548, 1397
HapII CCGG 3 cut(s) 224, 295, 1323
HgaI GACGC 3 cut(s) 188, 965, 1742
Hin1I GRCGYC 2 cut(s) 68, 180
Hin1II CATG 6 cut(s) 104, 404, 1015, 1550, 1712, 1976
HindIII AAGCTT 1 cut(s) 1424
HpaII CCGG 3 cut(s) 224, 295, 1323
HphI GGTGA 3 cut(s) 893, 1075, 1450
Hpy166II GTNNAC 2 cut(s) 1083, 1134
Hpy188I TCNGA 7 cut(s) 42, 515, 673, 882, 915, 1245, 1294
Hpy8I GTNNAC 2 cut(s) 1083, 1134
Hpy99I CGWCG 2 cut(s) 70, 73
HpyCH4III ACNGT 5 cut(s) 9, 98, 200, 1162, 1282
HpyCH4IV ACGT 5 cut(s) 68, 463, 648, 848, 1169
HpyF10VI GCNNNNNNNGC 2 cut(s) 587, 706
HpyF3I CTNAG 4 cut(s) 512, 756, 905, 1608
HpySE526I ACGT 5 cut(s) 68, 463, 648, 848, 1169
Hsp92I GRCGYC 2 cut(s) 68, 180
Hsp92II CATG 6 cut(s) 104, 404, 1015, 1550, 1712, 1976
Kpn2I TCCGGA 2 cut(s) 223, 1322
KpnI GGTACC 1 cut(s) 13
Kzo9I GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
LmnI GCTCC 3 cut(s) 481, 587, 837
Lsp1109I GCAGC 2 cut(s) 696, 1237
LweI GCATC 4 cut(s) 259, 695, 1347, 1834
MaeI CTAG 1 cut(s) 1028
MaeII ACGT 5 cut(s) 68, 463, 648, 848, 1169
MaeIII GTNAC 1 cut(s) 899
MalI GATC 8 cut(s) 665, 795, 912, 1200, 1288, 1446, 1484, 1593
MboI GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
MfeI CAATTG 1 cut(s) 576
MflI RGATCY 4 cut(s) 663, 910, 1198, 1591
MhlI GDGCHC 3 cut(s) 486, 834, 924
MlsI TGGCCA 1 cut(s) 1397
MluNI TGGCCA 1 cut(s) 1397
MlyI GAGTC 5 cut(s) 515, 748, 864, 1108, 1963
MmeI TCCRAC 4 cut(s) 20, 1190, 1362, 1460
Mox20I TGGCCA 1 cut(s) 1397
Mph1103I ATGCAT 1 cut(s) 688
MroI TCCGGA 2 cut(s) 223, 1322
MscI TGGCCA 1 cut(s) 1397
MseI TTAA 4 cut(s) 213, 257, 614, 1410
MslI CAYNNNNRTG 2 cut(s) 717, 1713
Msp20I TGGCCA 1 cut(s) 1397
MspI CCGG 3 cut(s) 224, 295, 1323
MspR9I CCNGG 5 cut(s) 184, 295, 296, 385, 798
MunI CAATTG 1 cut(s) 576
Mva1269I GAATGC 3 cut(s) 231, 521, 1404
MvaI CCWGG 3 cut(s) 184, 385, 798
MwoI GCNNNNNNNGC 2 cut(s) 587, 706
NciI CCSGG 2 cut(s) 295, 296
NdeII GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
NlaIII CATG 6 cut(s) 104, 404, 1015, 1550, 1712, 1976
NlaIV GGNNCC 5 cut(s) 11, 308, 321, 665, 1367
NmuCI GTSAC 1 cut(s) 899
NsiI ATGCAT 1 cut(s) 688
OliI CACNNNNGTG 1 cut(s) 717
PaeR7I CTCGAG 3 cut(s) 923, 1737, 1848
PagI TCATGA 1 cut(s) 1546
PcsI WCGNNNNNNNCGW 2 cut(s) 46, 1515
PctI GAATGC 3 cut(s) 231, 521, 1404
PfeI GAWTC 6 cut(s) 438, 539, 565, 1035, 1050, 1326
PflMI CCANNNNNTGG 1 cut(s) 1172
PfoI TCCNGGA 1 cut(s) 796
PkrI GCNGC 2 cut(s) 711, 1252
PleI GAGTC 5 cut(s) 514, 748, 864, 1108, 1963
PpsI GAGTC 5 cut(s) 514, 748, 864, 1108, 1963
PpuMI RGGWCCY 1 cut(s) 307
PsiI TTATAA 1 cut(s) 1274
Psp124BI GAGCTC 1 cut(s) 486
Psp1406I AACGTT 1 cut(s) 1169
Psp5II RGGWCCY 1 cut(s) 307
Psp6I CCWGG 3 cut(s) 182, 383, 796
PspGI CCWGG 3 cut(s) 182, 383, 796
PspN4I GGNNCC 5 cut(s) 11, 308, 321, 665, 1367
PspPI GGNCC 4 cut(s) 307, 320, 336, 890
PspPPI RGGWCCY 1 cut(s) 307
PspXI VCTCGAGB 1 cut(s) 923
PstI CTGCAG 1 cut(s) 1128
PsuI RGATCY 4 cut(s) 663, 910, 1198, 1591
RsaI GTAC 4 cut(s) 6, 11, 1284, 1652
RsaNI GTAC 4 cut(s) 5, 10, 1283, 1651
RseI CAYNNNNRTG 2 cut(s) 717, 1713
SacI GAGCTC 1 cut(s) 486
SaqAI TTAA 4 cut(s) 213, 257, 614, 1410
SatI GCNGC 2 cut(s) 710, 1251
Sau3AI GATC 8 cut(s) 663, 793, 910, 1198, 1286, 1444, 1482, 1591
Sau96I GGNCC 4 cut(s) 307, 320, 336, 890
SchI GAGTC 5 cut(s) 515, 748, 864, 1108, 1963
ScrFI CCNGG 5 cut(s) 184, 295, 296, 385, 798
SduI GDGCHC 3 cut(s) 486, 834, 924
SfaNI GCATC 4 cut(s) 259, 695, 1347, 1834
SfcI CTRYAG 2 cut(s) 1124, 1991
Sfr274I CTCGAG 3 cut(s) 923, 1737, 1848
SinI GGWCC 3 cut(s) 307, 320, 890
SlaI CTCGAG 3 cut(s) 923, 1737, 1848
SmaI CCCGGG 1 cut(s) 296
SmiMI CAYNNNNRTG 2 cut(s) 717, 1713
SmlI CTYRAG 9 cut(s) 923, 1109, 1181, 1427, 1595, 1737, 1848, 1955, 1977
SmoI CTYRAG 9 cut(s) 923, 1109, 1181, 1427, 1595, 1737, 1848, 1955, 1977
SsiI CCGC 2 cut(s) 731, 1208
SspI AATATT 1 cut(s) 1240
SspMI CTAG 1 cut(s) 1028
SstI GAGCTC 1 cut(s) 486
StyD4I CCNGG 5 cut(s) 182, 293, 294, 383, 796
StyI CCWWGG 1 cut(s) 1369
TaaI ACNGT 5 cut(s) 9, 98, 200, 1162, 1282
TaiI ACGT 5 cut(s) 71, 466, 651, 851, 1172
TatI WGTACW 1 cut(s) 1650
TfiI GAWTC 6 cut(s) 438, 539, 565, 1035, 1050, 1326
Tru1I TTAA 4 cut(s) 213, 257, 614, 1410
Tru9I TTAA 4 cut(s) 213, 257, 614, 1410
TscAI CASTG 4 cut(s) 178, 279, 665, 1060
TseFI GTSAC 1 cut(s) 899
TseI GCWGC 2 cut(s) 709, 1250
Tsp45I GTSAC 1 cut(s) 899
TspGWI ACGGA 1 cut(s) 178
TspMI CCCGGG 1 cut(s) 294
TspRI CASTG 4 cut(s) 178, 279, 665, 1060
Van91I CCANNNNNTGG 1 cut(s) 1172
VpaK11BI GGWCC 3 cut(s) 307, 320, 890
XagI CCTNNNNNAGG 1 cut(s) 314
XapI RAATTY 5 cut(s) 218, 347, 641, 1268, 1457
XhoI CTCGAG 3 cut(s) 923, 1737, 1848
XmaI CCCGGG 1 cut(s) 294
XspI CTAG 1 cut(s) 1028
ZraI GACGTC 1 cut(s) 69
Zsp2I ATGCAT 1 cut(s) 688
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.