Rh2CG580600

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000084
Physical Location & Seq
Forward (+)
75955716 .. 75957550
1835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG580600.1

Sequence Viewer

Length: 1281 bp
ATGGATGATCAAACTCAAAGTGGAATATTAGCTCCGGCTGTGGACGAGAGTAAAGATTGGATAAATGAGCATCCGGATTGCATTCTGTCATCCATACTTTCATTGTTAACAATAAAAGTTGCAGCGGAGACTAGCATTGTATCCCGCCAGTGGAGGAACCTTTGGAAGACAAGGCCTCCCAATCTTGAATTAGACATTGTTGCATCTTTGAGTCTTCATTTCGAGAGACAGTGCTATATAAAACGTGTGAATGAAGTTTTGGAGCTCTACTCTGGCAACGAGCTAGACTCATTCAAAGTGGCATTCTTTTTTAATCGAGAATTTACTGAAGATCTTGACAAATGGGTTCGTTTTGCAATTACAAAGGGAGCTCAAAAGCTGGATCTTCAATTATTAAGAGGCGCTTTGGACCCATATCATAATTTTTATGTTTTTCCTCACTGGATCCTTGCAGATTTGAACGCATCAACCCTAAAGCATTTGTCATTGTATCGATGTGTTCTAAAACCTCCTACTGATTTTGACAGATTCATTCAGCTAGAAACTCTTTCTCTGAATGACGTTGTAGTCGATCCAGATTTTTTGGCACGTCTTTTCTCTGCTTGTGTGCTTCTCGAAAGCTTCACCTTGAACACATGTGATGTGCGCTCAAATCTTATTATTGGTCCATCACTTCACCTGCATGATCTGAAAGTGCTCACGTGTTGCCGATTAGGAAGACTAGAGATTGATGCAGTAAATCTTTCCTCCTTAGAATATGATGGATATAATACGGAGATTTCTTTCATGAGAACTCCACGGCTAGTAAGATGTTTTTTTAAGGGATGGTCTATAGGTCCGGTACCTCATCTGCTAACCCAACTCCCCCTGTGTTCTGAGCTTGCGACTCTTCATCTGCAGATCAGACATAATTTCGAACATATACCCCAAACTTTTCCAACATTGAAAAACCTAAAGCAAGTGAAGTTGGATCTCCTCATGCTTGACCTTGAACTTGGGAGTGTTCTAAATATTCTCAAGGCTGCACCACTTTTGGAAGAACTTATAATAACAACACGAGCTCCAGACTATCACGGAGAGATGAGGAATCTTTCTACATTCTCACATAATCATTTGAGAAAAATAAAGATGCAGGGGTTCCAAGGTATGTGGTTTGAGATAGAGTTCGCCATTTCCATTCTTAAAATTGCAACAAAGCTTGAGGATGGGAACGAGGATGAGAACCCAGAGGAATATGAGGACCCAGGCGATGAAAATGTGGACAATGTGCCTTATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

426

Amino Acids

48.97

Weight (kDa)

5.23

Isoelectric Point (pI)

33.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 87 - 401 5.7e-38 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 112 - 268 1.2e-08 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1046
AarI CACCTGC 1 cut(s) 687
AasI GACNNNNNNGTC 1 cut(s) 566
Acc36I ACCTGC 1 cut(s) 687
Acc65I GGTACC 1 cut(s) 841
AccB1I GGYRCC 1 cut(s) 841
AccIII TCCGGA 1 cut(s) 73
AciI CCGC 2 cut(s) 125, 145
AclWI GGATC 5 cut(s) 390, 439, 452, 566, 978
AcsI RAATTY 1 cut(s) 320
AcuI CTGAAG 1 cut(s) 348
AcvI CACGTG 1 cut(s) 702
AfaI GTAC 1 cut(s) 843
AfiI CCNNNNNNNGG 1 cut(s) 150
AflIII ACRYGT 3 cut(s) 244, 635, 701
AgsI TTSAA 7 cut(s) 188, 295, 389, 460, 631, 946, 992
AjiI CACGTC 1 cut(s) 590
AjnI CCWGG 1 cut(s) 1243
AjuI GAANNNNNNNTTGG 2 cut(s) 242, 274
Alw21I GWGCWC 4 cut(s) 267, 373, 699, 1063
Alw26I GTCTC 2 cut(s) 122, 220
AlwI GGATC 5 cut(s) 390, 439, 452, 566, 978
Aor13HI TCCGGA 1 cut(s) 73
AoxI GGCC 1 cut(s) 173
ApeKI GCWGC 2 cut(s) 122, 1022
ApoI RAATTY 1 cut(s) 320
Asp718I GGTACC 1 cut(s) 841
AspLEI GCGC 2 cut(s) 404, 648
AspS9I GGNCC 4 cut(s) 409, 665, 836, 1240
AsuHPI GGTGA 2 cut(s) 616, 668
AsuII TTCGAA 1 cut(s) 915
AvaII GGWCC 4 cut(s) 409, 665, 836, 1240
BamHI GGATCC 1 cut(s) 444
BanI GGYRCC 1 cut(s) 841
BanII GRGCYC 3 cut(s) 267, 373, 1063
BauI CACGAG 1 cut(s) 1056
BbrPI CACGTG 1 cut(s) 702
BbsI GAAGAC 3 cut(s) 173, 206, 724
Bbv12I GWGCWC 4 cut(s) 267, 373, 699, 1063
BbvI GCAGC 2 cut(s) 134, 1009
BccI CCATC 4 cut(s) 676, 755, 819, 1199
BceAI ACGGC 1 cut(s) 815
BciT130I CCWGG 1 cut(s) 1245
BciVI GTATCC 1 cut(s) 151
BclI TGATCA 1 cut(s) 7
BcoDI GTCTC 2 cut(s) 122, 220
BfaI CTAG 5 cut(s) 132, 284, 539, 722, 803
BfmI CTRYAG 2 cut(s) 831, 896
BfoI RGCGCY 1 cut(s) 405
BfuAI ACCTGC 1 cut(s) 687
BfuI GTATCC 1 cut(s) 151
BglII AGATCT 1 cut(s) 331
BisI GCNGC 2 cut(s) 123, 1023
BlsI GCNGC 2 cut(s) 124, 1024
Bme1390I CCNGG 1 cut(s) 1245
Bme18I GGWCC 4 cut(s) 409, 665, 836, 1240
BmgBI CACGTC 1 cut(s) 590
BmgT120I GGNCC 4 cut(s) 409, 665, 836, 1240
BmiI GGNNCC 6 cut(s) 158, 411, 446, 843, 1139, 1242
BmrFI CCNGG 1 cut(s) 1245
BmsI GCATC 5 cut(s) 79, 212, 473, 721, 1119
BpiI GAAGAC 3 cut(s) 173, 206, 724
BplI GAGNNNNNCTC 4 cut(s) 254, 286, 272, 304
BpmI CTGGAG 1 cut(s) 1047
Bpu14I TTCGAA 1 cut(s) 915
BpuEI CTTGAG 2 cut(s) 1001, 1220
Bsa29I ATCGAT 1 cut(s) 493
BsaAI YACGTR 1 cut(s) 702
BsaJI CCNNGG 3 cut(s) 797, 1141, 1243
BsaWI WCCGGW 2 cut(s) 73, 838
BsaXI ACNNNNNCTCC 4 cut(s) 160, 190, 1045, 1075
Bsc4I CCNNNNNNNGG 1 cut(s) 150
Bse1I ACTGG 2 cut(s) 148, 446
BseAI TCCGGA 1 cut(s) 73
BseBI CCWGG 1 cut(s) 1245
BseCI ATCGAT 1 cut(s) 493
BseDI CCNNGG 3 cut(s) 797, 1141, 1243
BseGI GGATG 6 cut(s) 10, 70, 89, 830, 1210, 1222
BseLI CCNNNNNNNGG 1 cut(s) 150
BseMII CTCAG 1 cut(s) 867
BseNI ACTGG 2 cut(s) 148, 446
BseRI GAGGAG 1 cut(s) 965
BseXI GCAGC 2 cut(s) 134, 1009
BsgI GTGCAG 1 cut(s) 1008
BshFI GGCC 1 cut(s) 175
BshNI GGYRCC 1 cut(s) 841
BshVI ATCGAT 1 cut(s) 493
BsiHKAI GWGCWC 4 cut(s) 267, 373, 699, 1063
BsiSI CCGG 3 cut(s) 35, 74, 839
BslI CCNNNNNNNGG 1 cut(s) 150
BsmAI GTCTC 2 cut(s) 122, 220
BsmI GAATGC 2 cut(s) 81, 302
BsnI GGCC 1 cut(s) 175
Bsp119I TTCGAA 1 cut(s) 915
Bsp1286I GDGCHC 4 cut(s) 267, 373, 699, 1063
Bsp13I TCCGGA 1 cut(s) 73
Bsp143I GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
BspACI CCGC 2 cut(s) 125, 145
BspANI GGCC 1 cut(s) 175
BspCNI CTCAG 1 cut(s) 868
BspDI ATCGAT 1 cut(s) 493
BspEI TCCGGA 1 cut(s) 73
BspHI TCATGA 1 cut(s) 786
BspLI GGNNCC 6 cut(s) 158, 411, 446, 843, 1139, 1242
BspMAI CTGCAG 1 cut(s) 900
BspMI ACCTGC 1 cut(s) 687
BspPI GGATC 5 cut(s) 390, 439, 452, 566, 978
BspT104I TTCGAA 1 cut(s) 915
BspT107I GGYRCC 1 cut(s) 841
BsrI ACTGG 2 cut(s) 148, 446
BssECI CCNNGG 3 cut(s) 797, 1141, 1243
BssMI GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
BssSI CACGAG 1 cut(s) 1056
BssT1I CCWWGG 1 cut(s) 1141
Bst2BI CACGAG 1 cut(s) 1056
Bst2UI CCWGG 1 cut(s) 1245
Bst4CI ACNGT 1 cut(s) 231
Bst6I CTCTTC 1 cut(s) 894
BstBAI YACGTR 1 cut(s) 702
BstBI TTCGAA 1 cut(s) 915
BstC8I GCNNGC 1 cut(s) 882
BstDEI CTNAG 2 cut(s) 751, 876
BstDSI CCRYGG 1 cut(s) 797
BstF5I GGATG 6 cut(s) 10, 70, 89, 830, 1210, 1222
BstH2I RGCGCY 1 cut(s) 405
BstHHI GCGC 2 cut(s) 404, 648
BstKTI GATC 8 cut(s) 10, 334, 385, 447, 574, 688, 903, 973
BstMAI GTCTC 2 cut(s) 122, 220
BstMBI GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
BstNI CCWGG 1 cut(s) 1245
BstNSI RCATGY 1 cut(s) 639
BstSCI CCNGG 1 cut(s) 1243
BstSFI CTRYAG 2 cut(s) 831, 896
BstV1I GCAGC 2 cut(s) 134, 1009
BstV2I GAAGAC 3 cut(s) 173, 206, 724
BstX2I RGATCY 4 cut(s) 331, 382, 444, 970
BstYI RGATCY 4 cut(s) 331, 382, 444, 970
Bsu15I ATCGAT 1 cut(s) 493
BsuI GTATCC 1 cut(s) 151
BsuRI GGCC 1 cut(s) 175
BsuTUI ATCGAT 1 cut(s) 493
BtgI CCRYGG 1 cut(s) 797
BtgZI GCGATG 1 cut(s) 1263
BtrI CACGTC 1 cut(s) 590
BtsCI GGATG 6 cut(s) 10, 70, 89, 830, 1210, 1222
BtsIMutI CAGTG 3 cut(s) 155, 236, 439
BveI ACCTGC 1 cut(s) 687
Cac8I GCNNGC 1 cut(s) 882
CciI TCATGA 1 cut(s) 786
CfoI GCGC 2 cut(s) 404, 648
Cfr13I GGNCC 4 cut(s) 409, 665, 836, 1240
ClaI ATCGAT 1 cut(s) 493
Csp6I GTAC 1 cut(s) 842
CspCI CAANNNNNGTGG 2 cut(s) 1130, 1165
CviAII CATG 5 cut(s) 636, 683, 787, 979, 1278
CviQI GTAC 1 cut(s) 842
DdeI CTNAG 2 cut(s) 751, 876
DpnI GATC 8 cut(s) 9, 333, 384, 446, 573, 687, 902, 972
DpnII GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
DrdI GACNNNNNNGTC 1 cut(s) 566
DseDI GACNNNNNNGTC 1 cut(s) 566
Eam1104I CTCTTC 1 cut(s) 894
EarI CTCTTC 1 cut(s) 894
Ecl136II GAGCTC 3 cut(s) 265, 371, 1061
Eco130I CCWWGG 1 cut(s) 1141
Eco147I AGGCCT 1 cut(s) 175
Eco24I GRGCYC 3 cut(s) 267, 373, 1063
Eco47I GGWCC 4 cut(s) 409, 665, 836, 1240
Eco53kI GAGCTC 3 cut(s) 265, 371, 1061
Eco57I CTGAAG 1 cut(s) 348
Eco72I CACGTG 1 cut(s) 702
EcoICRI GAGCTC 3 cut(s) 265, 371, 1061
EcoO109I RGGNCCY 1 cut(s) 1240
EcoRII CCWGG 1 cut(s) 1243
EcoT14I CCWWGG 1 cut(s) 1141
EcoT22I ATGCAT 1 cut(s) 1279
EcoT38I GRGCYC 3 cut(s) 267, 373, 1063
ErhI CCWWGG 1 cut(s) 1141
FaeI CATG 5 cut(s) 639, 686, 790, 982, 1281
FalI AAGNNNNNCTT 2 cut(s) 388, 420
FatI CATG 5 cut(s) 635, 682, 786, 978, 1277
FauI CCCGC 1 cut(s) 152
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 2 cut(s) 123, 1023
FokI GGATG 6 cut(s) 17, 57, 76, 837, 1217, 1229
FriOI GRGCYC 3 cut(s) 267, 373, 1063
Fsp4HI GCNGC 2 cut(s) 123, 1023
FspBI CTAG 5 cut(s) 132, 284, 539, 722, 803
GlaI GCGC 2 cut(s) 403, 647
GluI GCNGC 2 cut(s) 123, 1023
GsuI CTGGAG 1 cut(s) 1047
HaeII RGCGCY 1 cut(s) 405
HaeIII GGCC 1 cut(s) 175
HapII CCGG 3 cut(s) 35, 74, 839
HhaI GCGC 2 cut(s) 404, 648
Hin1II CATG 5 cut(s) 639, 686, 790, 982, 1281
Hin6I GCGC 2 cut(s) 402, 646
HinP1I GCGC 2 cut(s) 402, 646
HincII GTYRAC 1 cut(s) 108
HindII GTYRAC 1 cut(s) 108
HindIII AAGCTT 2 cut(s) 619, 1196
HinfI GANTC 5 cut(s) 211, 287, 528, 886, 1087
HpaI GTTAAC 1 cut(s) 108
HpaII CCGG 3 cut(s) 35, 74, 839
HphI GGTGA 2 cut(s) 616, 668
Hpy166II GTNNAC 3 cut(s) 43, 108, 1261
Hpy188I TCNGA 4 cut(s) 555, 690, 877, 905
Hpy188III TCNNGA 9 cut(s) 74, 185, 223, 317, 335, 575, 614, 787, 1064
Hpy8I GTNNAC 3 cut(s) 43, 108, 1261
HpyCH4III ACNGT 1 cut(s) 231
HpyCH4IV ACGT 4 cut(s) 244, 561, 589, 701
HpyF3I CTNAG 2 cut(s) 751, 876
HpySE526I ACGT 4 cut(s) 244, 561, 589, 701
Hsp92II CATG 5 cut(s) 639, 686, 790, 982, 1281
HspAI GCGC 2 cut(s) 402, 646
Kpn2I TCCGGA 1 cut(s) 73
KpnI GGTACC 1 cut(s) 845
Ksp22I TGATCA 1 cut(s) 7
KspAI GTTAAC 1 cut(s) 108
Kzo9I GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
LmnI GCTCC 4 cut(s) 37, 262, 368, 1066
Lsp1109I GCAGC 2 cut(s) 134, 1009
LweI GCATC 5 cut(s) 79, 212, 473, 721, 1119
MaeI CTAG 5 cut(s) 132, 284, 539, 722, 803
MaeII ACGT 4 cut(s) 244, 561, 589, 701
MalI GATC 8 cut(s) 9, 333, 384, 446, 573, 687, 902, 972
MboI GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
MboII GAAGA 7 cut(s) 178, 206, 341, 377, 729, 881, 1049
MflI RGATCY 4 cut(s) 331, 382, 444, 970
MhlI GDGCHC 4 cut(s) 267, 373, 699, 1063
MluCI AATT 7 cut(s) 188, 320, 357, 389, 421, 910, 1185
MlyI GAGTC 3 cut(s) 220, 281, 880
MmeI TCCRAC 2 cut(s) 948, 962
Mph1103I ATGCAT 1 cut(s) 1279
MroI TCCGGA 1 cut(s) 73
MseI TTAA 5 cut(s) 107, 312, 395, 819, 1182
MslI CAYNNNNRTG 1 cut(s) 681
MspA1I CMGCKG 1 cut(s) 125
MspI CCGG 3 cut(s) 35, 74, 839
MspR9I CCNGG 1 cut(s) 1245
Mva1269I GAATGC 2 cut(s) 81, 302
MvaI CCWGG 1 cut(s) 1245
NdeII GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
NlaIII CATG 5 cut(s) 639, 686, 790, 982, 1281
NlaIV GGNNCC 6 cut(s) 158, 411, 446, 843, 1139, 1242
NsiI ATGCAT 1 cut(s) 1279
NspI RCATGY 1 cut(s) 639
NspV TTCGAA 1 cut(s) 915
PagI TCATGA 1 cut(s) 786
PaqCI CACCTGC 1 cut(s) 687
PceI AGGCCT 1 cut(s) 175
PciI ACATGT 1 cut(s) 635
PcsI WCGNNNNNNNCGW 1 cut(s) 567
PctI GAATGC 2 cut(s) 81, 302
PfeI GAWTC 2 cut(s) 528, 1087
PkrI GCNGC 2 cut(s) 124, 1024
PleI GAGTC 3 cut(s) 219, 281, 880
PmaCI CACGTG 1 cut(s) 702
PmlI CACGTG 1 cut(s) 702
PpsI GAGTC 3 cut(s) 219, 281, 880
Ppu21I YACGTR 1 cut(s) 702
PpuMI RGGWCCY 1 cut(s) 1240
PscI ACATGT 1 cut(s) 635
PsiI TTATAA 1 cut(s) 1046
Psp124BI GAGCTC 3 cut(s) 267, 373, 1063
Psp5II RGGWCCY 1 cut(s) 1240
Psp6I CCWGG 1 cut(s) 1243
PspCI CACGTG 1 cut(s) 702
PspGI CCWGG 1 cut(s) 1243
PspN4I GGNNCC 6 cut(s) 158, 411, 446, 843, 1139, 1242
PspPI GGNCC 4 cut(s) 409, 665, 836, 1240
PspPPI RGGWCCY 1 cut(s) 1240
PstI CTGCAG 1 cut(s) 900
PsuI RGATCY 4 cut(s) 331, 382, 444, 970
RsaI GTAC 1 cut(s) 843
RsaNI GTAC 1 cut(s) 842
RseI CAYNNNNRTG 1 cut(s) 681
SacI GAGCTC 3 cut(s) 267, 373, 1063
SaqAI TTAA 5 cut(s) 107, 312, 395, 819, 1182
SatI GCNGC 2 cut(s) 123, 1023
Sau3AI GATC 8 cut(s) 7, 331, 382, 444, 571, 685, 900, 970
Sau96I GGNCC 4 cut(s) 409, 665, 836, 1240
SchI GAGTC 3 cut(s) 220, 281, 880
ScrFI CCNGG 1 cut(s) 1245
SduI GDGCHC 4 cut(s) 267, 373, 699, 1063
SfaNI GCATC 5 cut(s) 79, 212, 473, 721, 1119
SfcI CTRYAG 2 cut(s) 831, 896
SfuI TTCGAA 1 cut(s) 915
SinI GGWCC 4 cut(s) 409, 665, 836, 1240
SmiMI CAYNNNNRTG 1 cut(s) 681
SmlI CTYRAG 2 cut(s) 1016, 1199
SmoI CTYRAG 2 cut(s) 1016, 1199
Sse9I AATT 7 cut(s) 188, 320, 357, 389, 421, 910, 1185
SseBI AGGCCT 1 cut(s) 175
SsiI CCGC 2 cut(s) 125, 145
SspI AATATT 2 cut(s) 27, 1012
SspMI CTAG 5 cut(s) 132, 284, 539, 722, 803
SstI GAGCTC 3 cut(s) 267, 373, 1063
StuI AGGCCT 1 cut(s) 175
StyD4I CCNGG 1 cut(s) 1243
StyI CCWWGG 1 cut(s) 1141
TaaI ACNGT 1 cut(s) 231
TaiI ACGT 4 cut(s) 247, 564, 592, 704
TaqI TCGA 6 cut(s) 222, 316, 493, 570, 615, 915
TasI AATT 7 cut(s) 188, 320, 357, 389, 421, 910, 1185
TfiI GAWTC 2 cut(s) 528, 1087
Tru1I TTAA 5 cut(s) 107, 312, 395, 819, 1182
Tru9I TTAA 5 cut(s) 107, 312, 395, 819, 1182
TscAI CASTG 3 cut(s) 155, 236, 446
TseI GCWGC 2 cut(s) 122, 1022
TspDTI ATGAA 7 cut(s) 90, 206, 267, 520, 775, 881, 1266
TspGWI ACGGA 2 cut(s) 788, 1089
TspRI CASTG 3 cut(s) 155, 236, 446
VpaK11BI GGWCC 4 cut(s) 409, 665, 836, 1240
XapI RAATTY 1 cut(s) 320
XceI RCATGY 1 cut(s) 639
XspI CTAG 5 cut(s) 132, 284, 539, 722, 803
Zsp2I ATGCAT 1 cut(s) 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.