RchiOBHm_Chr5g0047501

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000084
Physical Location & Seq
Forward (+)
43982698 .. 43989390
6693 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32541

Sequence Viewer

Length: 1272 bp
ATGAATTTGGAGATCAGTATACATAGGTTTGGTCAGTATGAAAGAGAAGCCTTTGTAGGATGCGTGAATAAATTTTTGAAGCTTTACCATGGTAAGGAGGTTGACTCTTTCAAAGTGTCATTCCCTTTAGATGGAGTTTATGCTGCCGACCTAGATGAATGGATTCATTTTGCAATTAGAAAGGGAGCTCAAGTGCTTGATCTTCAATTATTATGTTGCGGCCTTCTAGAAACAAACAATTTTTATGTGTTCCCTCACTGGTTACTCCCAGGATCTCTAAAGCATTTGTCATTGCTAAGGTGTGTTCTAGGACCTCCTCTTGATTTTGGCACATTCAATGAGTTAAGAACTCTTTCTTTGAATAATGTTATCATAGATGAAAAATTTGTGGCACATCTATCCTCTGTTTGTTTGTGCCTTAAAAGATTGACCTTAAAGGAGTGCAGTGTGGGTTCGTGTCTTATTCTTGGGGCTCCATTACTTTGTTTGACCGAGTTGAAAGTGCTCCAATGTATTGATTTAGCCAAACTGGAGATTCACTGCAAAAATATTACCTCCTTGGAATATGAAGGACTTGCAGAGACTTATTACATGAAAACAAAATGGTTGGCAAGAATTTTTTGGTCTGATAGATCTTTCAATGATTCATCACTTCATGCACTAACCCAACTTGCCTCGTGTCCTGGGCTAGAGTGTCTTCATCTGCGGCTTTGGTTTTCGGGGGAAGAAATACCTGAAAACATACAAACATTTACAAACCTCAAGCAACTGCACTTGGATCTGTTTTCACCGCACTTGAATGTTTGTGGTGTTCTGATTATAATCAAGGCTGCACCTATGTTGGAAGAATTTGTATTAACGGTACGGGCATCTATTCACAACGAGGTGAGAAGTATCAGGAGGAAGATGAGCATTCTTTCTAGATTCTCACATCTTTGTTTGAGGAAAGTTAAGATTCATGGTTTCCAAGGTAGATGGTACGAAATTGAGTTGGCCATTTGCATTCTGAAAATTGCTAAAAAGATGGAGATAATGGTAATCGATCCTATTGGAAAATACTATGCCGGTGGTGGTGAATGGAAGGACATGAATGATTCAAGATATTCGTATGAGGCTGTTGTTCAGGTCAAAGAGGCCGTGGGTGAGGCTAGGGAGGACGGTGAGGCTGTGGAGGTGGATGAGAAAAAGGCTGAGGCTGTGGATGAGATGGGGGACGAGGATGGTTGGGAAGAAAGAGGTAGGGCATTTGTCCAAAAAATTTACGTAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

423

Amino Acids

48.34

Weight (kDa)

6.09

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 30 - 354 2.7e-40 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000084)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29034
fragaria_vesca FvH4_2g19762 FvH4_3g09170 FvH4_5g20951 FvH4_6g26050 FvH4_6g34920 FvH4_6g44020 FvH4_6g44041 FvH4_6g44050 FvH4_6g47821 FvH4_6g47821 FvH4_6g47970 FvH4_6g48151 FvH4_6g48180 FvH4_6g48300 FvH4_6g48320 FvH4_6g48330 FvH4_6g48330 FvH4_6g48330 FvH4_6g48431 FvH4_6g50821 FvH4_6g50840 FvH4_7g25361 FvH4_7g27481 FvH4_7g31230
malus_domestica MD02G1023100.v1.1 MD09G1053300.v1.1 MD09G1063900.v1.1 MD15G1165800.v1.1 MD15G1165900.v1.1
prunus_persica Prupe.3G259300_v2.0.a1 Prupe.3G259800_v2.0.a1 Prupe.3G265300_v2.0.a1 Prupe.5G213700_v2.0.a1 Prupe.7G131300_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1 Prupe.7G249000_v2.0.a1
pyrus_communis pycom02g02000 pycom02g02010 pycom111g05350 pycom15g14860
rosa_chinensis RchiOBHm_Chr1g0366891 RchiOBHm_Chr2g0087591 RchiOBHm_Chr2g0162581 RchiOBHm_Chr2g0162591 RchiOBHm_Chr2g0166621 RchiOBHm_Chr2g0167501 RchiOBHm_Chr2g0167541 RchiOBHm_Chr2g0167551 RchiOBHm_Chr2g0167561 RchiOBHm_Chr2g0167591 RchiOBHm_Chr2g0167601 RchiOBHm_Chr2g0167641 RchiOBHm_Chr2g0167681 RchiOBHm_Chr2g0168251 RchiOBHm_Chr3g0476161 RchiOBHm_Chr3g0476181 RchiOBHm_Chr3g0476211 RchiOBHm_Chr5g0008761 RchiOBHm_Chr5g0047501 RchiOBHm_Chr6g0269121
rosa_laevigata RLG00000011477 RLG00000014026 RLG00000015309 RLG00000015881 RLG00000017161 RLG00000018247 RLG00000019905 RLG00000021634 RLG00000021635 RLG00000021680 RLG00000021681 RLG00000021725 RLG00000021734 RLG00000021735 RLG00000021739 RLG00000021741 RLG00000021745 RLG00000021756 RLG00000021758 RLG00000021759 RLG00000022096 RLG00000023339 RLG00000023786 RLG00000025547 RLG00000031523 RLG00000031601 RLG00000031628 RLG00000033737 RLG00000034477 RLG00000034478
rosa_multiflora Rmu_co8440045.1_g000001 Rmu_co8505525.1_g000001 Rmu_sc0000141.1_g000004 Rmu_sc0000148.1_g000068 Rmu_sc0000258.1_g000040 Rmu_sc0000272.1_g000035 Rmu_sc0000309.1_g000036 Rmu_sc0000335.1_g000109 Rmu_sc0000335.1_g000110 Rmu_sc0000382.1_g000008 Rmu_sc0000902.1_g000005 Rmu_sc0001392.1_g000007 Rmu_sc0001665.1_g000048 Rmu_sc0001833.1_g000013 Rmu_sc0001970.1_g000001 Rmu_sc0001970.1_g000006 Rmu_sc0001970.1_g000013 Rmu_sc0002034.1_g000008 Rmu_sc0002106.1_g000008 Rmu_sc0002268.1_g000017 Rmu_sc0002299.1_g000026 Rmu_sc0002329.1_g000037 Rmu_sc0002755.1_g000002 Rmu_sc0003264.1_g000024 Rmu_sc0003354.1_g000004 Rmu_sc0003433.1_g000010 Rmu_sc0003511.1_g000007 Rmu_sc0004888.1_g000041 Rmu_sc0006599.1_g000001 Rmu_sc0006763.1_g000016 Rmu_sc0006763.1_g000017 Rmu_sc0007003.1_g000002 Rmu_sc0007418.1_g000028 Rmu_sc0008222.1_g000002 Rmu_sc0010971.1_g000001 Rmu_sc0011091.1_g000001 Rmu_sc0011091.1_g000002 Rmu_sc0013199.1_g000005 Rmu_sc0016089.1_g000001 Rmu_sc0024549.1_g000004 Rmu_sc0024939.1_g000001 Rmu_sc0025855.1_g000003 Rmu_sc0026912.1_g000001 Rmu_sc0039772.1_g000001 Rmu_ssc0000171.1_g000028 Rmu_ssc0000171.1_g000030
rosa_roxburghii Rroxscaffold_1G00067230 Rroxscaffold_1G00075140 Rroxscaffold_2G00080050 Rroxscaffold_2G00083230 Rroxscaffold_2G00083240 Rroxscaffold_2G00083340 Rroxscaffold_2G00083390 Rroxscaffold_2G00083400 Rroxscaffold_2G00083420 Rroxscaffold_2G00083430 Rroxscaffold_2G00083940 Rroxscaffold_2G00084400 Rroxscaffold_2G00084700 Rroxscaffold_2G00084710 Rroxscaffold_2G00102510 Rroxscaffold_2G00105780 Rroxscaffold_2G00125110 Rroxscaffold_2G00125750 Rroxscaffold_2G00125790 Rroxscaffold_2G00153440 Rroxscaffold_3G00259540 Rroxscaffold_4G00314070 Rroxscaffold_5G00345290 Rroxscaffold_6G00399110 Rroxscaffold_6G00430120
rosa_rugosa Rorug01G0086600 Rorug01G0476800 Rorug02G0530700 Rorug03G0121000 Rorug03G0153000 Rorug03G0272400 Rorug03G0279800 Rorug04G0438800 Rorug05G0566700 Rorug05G0566800 Rorug06G0114400 Rorug07G0057400 Rorug07G0073700
rosa_samantha Rh1AG028900 Rh1AG062000 Rh1AG108900 Rh1AG183100 Rh1BG072000 Rh2AG030200 Rh2AG400600 Rh2AG420900 Rh2AG534000 Rh2AG590500 Rh2AG598300 Rh2AG598700 Rh2AG599000 Rh2AG599100 Rh2AG599500 Rh2AG599600 Rh2AG599900 Rh2AG600200 Rh2AG601200 Rh2AG633000 Rh2BG030200 Rh2BG097100 Rh2BG318200 Rh2BG403500 Rh2BG577200 Rh2BG602600 Rh2BG602700 Rh2BG609600 Rh2BG609700 Rh2BG610200 Rh2BG610400 Rh2BG610700 Rh2BG614300 Rh2BG646600 Rh2CG030500 Rh2CG099200 Rh2CG283200 Rh2CG386900 Rh2CG573500 Rh2CG573600 Rh2CG580400 Rh2CG580500 Rh2CG580600 Rh2CG580800 Rh2CG581100 Rh2CG582100 Rh2CG613300 Rh2CG613400 Rh2DG030400 Rh2DG613100 Rh2DG613200 Rh2DG621400 Rh2DG621600 Rh2DG621800 Rh2DG622500 Rh2DG622800 Rh2DG623100 Rh2DG623400 Rh2DG624500 Rh2DG624600 Rh2DG624800 Rh2DG661200 Rh2DG661300 Rh3AG048300 Rh3AG177800 Rh3BG203700 Rh3BG234500 Rh3BG234700 Rh3BG235200 Rh3BG330000 Rh3CG049600 Rh3CG194100 Rh3CG201200 Rh3CG230000 Rh3CG350600 Rh3DG050400 Rh3DG171400 Rh3DG304300 Rh4BG006600 Rh4BG159000 Rh4CG126300 Rh4CG171700 Rh4CG241000 Rh4DG007800 Rh4DG042200 Rh4DG311700 Rh5AG067200 Rh5AG070100 Rh5BG067000 Rh5BG247800 Rh5BG324200 Rh5BG443300 Rh5CG074800 Rh5CG078200 Rh5CG078300 Rh5CG180800 Rh5DG061800 Rh5DG066300 Rh5DG066400 Rh5DG167500 Rh5DG335000 Rh6AG174900 Rh6CG174500 Rh6CG392000 Rh6DG167000 Rh7BG185800 Rh7DG175300
rosa_wichuraiana Rw0G012810 Rw0G014220 Rw0G014230 Rw0G014240 Rw2G002410 Rw2G049760 Rw2G049770 Rw2G049780 Rw2G049800 Rw2G049820 Rw2G049920 Rw4G000180 Rw4G001290 Rw4G003630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 821
AccI GTMKAC 1 cut(s) 19
AciI CCGC 3 cut(s) 219, 706, 791
AclWI GGATC 3 cut(s) 280, 786, 1037
AcoI YGGCCR 1 cut(s) 993
AcsI RAATTY 6 cut(s) 4, 71, 383, 615, 848, 1257
AfaI GTAC 2 cut(s) 864, 980
AfiI CCNNNNNNNGG 2 cut(s) 94, 131
AgsI TTSAA 9 cut(s) 79, 112, 206, 337, 361, 499, 640, 799, 1098
AjnI CCWGG 2 cut(s) 268, 682
AluBI AGCT 2 cut(s) 82, 188
AluI AGCT 2 cut(s) 82, 188
Alw21I GWGCWC 2 cut(s) 190, 507
Alw26I GTCTC 1 cut(s) 575
AlwI GGATC 3 cut(s) 280, 786, 1037
AoxI GGCC 3 cut(s) 220, 993, 1134
ApeKI GCWGC 2 cut(s) 143, 830
ApoI RAATTY 6 cut(s) 4, 71, 383, 615, 848, 1257
Asp700I GAANNNNTTC 2 cut(s) 162, 352
AspS9I GGNCC 1 cut(s) 311
AsuHPI GGTGA 5 cut(s) 780, 898, 1085, 1154, 1172
AvaII GGWCC 1 cut(s) 311
BalI TGGCCA 1 cut(s) 995
BanII GRGCYC 2 cut(s) 190, 475
BauI CACGAG 1 cut(s) 676
BbsI GAAGAC 1 cut(s) 689
Bbv12I GWGCWC 2 cut(s) 190, 507
BbvCI CCTCAGC 1 cut(s) 1191
BbvI GCAGC 2 cut(s) 130, 817
BccI CCATC 5 cut(s) 125, 969, 1018, 1201, 1214
BceAI ACGGC 1 cut(s) 1121
BciT130I CCWGG 2 cut(s) 270, 684
BcoDI GTCTC 1 cut(s) 575
BfaI CTAG 6 cut(s) 152, 227, 308, 689, 921, 1149
BglII AGATCT 1 cut(s) 632
BisI GCNGC 4 cut(s) 144, 220, 707, 831
BlsI GCNGC 4 cut(s) 145, 221, 708, 832
Bme1390I CCNGG 2 cut(s) 270, 684
Bme18I GGWCC 1 cut(s) 311
BmgT120I GGNCC 1 cut(s) 311
BmiI GGNNCC 1 cut(s) 474
BmrFI CCNGG 2 cut(s) 270, 684
BmsI GCATC 2 cut(s) 50, 878
BpiI GAAGAC 1 cut(s) 689
BplI GAGNNNNNCTC 2 cut(s) 89, 121
BpmI CTGGAG 1 cut(s) 551
Bpu10I CCTNAGC 2 cut(s) 296, 1191
BpuEI CTTGAG 2 cut(s) 174, 746
Bsa29I ATCGAT 1 cut(s) 1041
BsaAI YACGTR 1 cut(s) 1264
BsaBI GATNNNNATC 1 cut(s) 821
BsaJI CCNNGG 6 cut(s) 88, 268, 558, 683, 967, 1137
BsaXI ACNNNNNCTCC 2 cut(s) 177, 207
Bsc4I CCNNNNNNNGG 2 cut(s) 94, 131
Bse118I RCCGGY 1 cut(s) 1064
Bse1I ACTGG 2 cut(s) 263, 534
Bse3DI GCAATG 1 cut(s) 290
Bse8I GATNNNNATC 1 cut(s) 821
BseBI CCWGG 2 cut(s) 270, 684
BseCI ATCGAT 1 cut(s) 1041
BseDI CCNNGG 6 cut(s) 88, 268, 558, 683, 967, 1137
BseGI GGATG 4 cut(s) 65, 1183, 1207, 1225
BseJI GATNNNNATC 1 cut(s) 821
BseLI CCNNNNNNNGG 2 cut(s) 94, 131
BseMI GCAATG 1 cut(s) 290
BseMII CTCAG 1 cut(s) 1182
BseNI ACTGG 2 cut(s) 263, 534
BseRI GAGGAG 1 cut(s) 306
BseXI GCAGC 2 cut(s) 130, 817
BsgI GTGCAG 3 cut(s) 463, 755, 816
BshFI GGCC 3 cut(s) 222, 995, 1136
BshVI ATCGAT 1 cut(s) 1041
BsiHKAI GWGCWC 2 cut(s) 190, 507
BsiSI CCGG 1 cut(s) 1065
BslFI GGGAC 1 cut(s) 1226
BslI CCNNNNNNNGG 2 cut(s) 94, 131
BsmAI GTCTC 1 cut(s) 575
BsmFI GGGAC 1 cut(s) 1226
BsmI GAATGC 2 cut(s) 912, 1002
BsnI GGCC 3 cut(s) 222, 995, 1136
Bsp1286I GDGCHC 3 cut(s) 190, 475, 507
Bsp143I GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
Bsp19I CCATGG 1 cut(s) 88
BspACI CCGC 3 cut(s) 219, 706, 791
BspANI GGCC 3 cut(s) 222, 995, 1136
BspCNI CTCAG 1 cut(s) 1183
BspDI ATCGAT 1 cut(s) 1041
BspLI GGNNCC 1 cut(s) 474
BspPI GGATC 3 cut(s) 280, 786, 1037
BsrDI GCAATG 1 cut(s) 290
BsrFI RCCGGY 1 cut(s) 1064
BsrI ACTGG 2 cut(s) 263, 534
BssAI RCCGGY 1 cut(s) 1064
BssECI CCNNGG 6 cut(s) 88, 268, 558, 683, 967, 1137
BssMI GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
BssNAI GTATAC 1 cut(s) 20
BssSI CACGAG 1 cut(s) 676
BssT1I CCWWGG 3 cut(s) 88, 558, 967
Bst1107I GTATAC 1 cut(s) 20
Bst2BI CACGAG 1 cut(s) 676
Bst2UI CCWGG 2 cut(s) 270, 684
Bst4CI ACNGT 2 cut(s) 862, 1160
BstBAI YACGTR 1 cut(s) 1264
BstDEI CTNAG 2 cut(s) 296, 1191
BstDSI CCRYGG 2 cut(s) 88, 1137
BstF5I GGATG 4 cut(s) 65, 1183, 1207, 1225
BstKTI GATC 6 cut(s) 15, 202, 275, 635, 781, 1045
BstMAI GTCTC 1 cut(s) 575
BstMBI GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
BstNI CCWGG 2 cut(s) 270, 684
BstSCI CCNGG 2 cut(s) 268, 682
BstSNI TACGTA 1 cut(s) 1264
BstV1I GCAGC 2 cut(s) 130, 817
BstV2I GAAGAC 1 cut(s) 689
BstX2I RGATCY 3 cut(s) 272, 632, 778
BstYI RGATCY 3 cut(s) 272, 632, 778
BstZ17I GTATAC 1 cut(s) 20
Bsu15I ATCGAT 1 cut(s) 1041
BsuRI GGCC 3 cut(s) 222, 995, 1136
BsuTUI ATCGAT 1 cut(s) 1041
BtgI CCRYGG 2 cut(s) 88, 1137
BtsCI GGATG 4 cut(s) 65, 1183, 1207, 1225
BtsI GCAGTG 2 cut(s) 451, 538
BtsIMutI CAGTG 3 cut(s) 256, 451, 538
Cfr10I RCCGGY 1 cut(s) 1064
Cfr13I GGNCC 1 cut(s) 311
ClaI ATCGAT 1 cut(s) 1041
Csp6I GTAC 2 cut(s) 863, 979
CviAII CATG 5 cut(s) 89, 592, 656, 959, 1087
CviQI GTAC 2 cut(s) 863, 979
DdeI CTNAG 2 cut(s) 296, 1191
DpnI GATC 6 cut(s) 14, 201, 274, 634, 780, 1044
DpnII GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
EaeI YGGCCR 1 cut(s) 993
Ecl136II GAGCTC 1 cut(s) 188
Eco105I TACGTA 1 cut(s) 1264
Eco130I CCWWGG 3 cut(s) 88, 558, 967
Eco24I GRGCYC 2 cut(s) 190, 475
Eco47I GGWCC 1 cut(s) 311
Eco53kI GAGCTC 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 188
EcoO109I RGGNCCY 1 cut(s) 311
EcoRII CCWGG 2 cut(s) 268, 682
EcoT14I CCWWGG 3 cut(s) 88, 558, 967
EcoT38I GRGCYC 2 cut(s) 190, 475
ErhI CCWWGG 3 cut(s) 88, 558, 967
FaeI CATG 5 cut(s) 92, 595, 659, 962, 1090
FaqI GGGAC 1 cut(s) 1226
FatI CATG 5 cut(s) 88, 591, 655, 958, 1086
FblI GTMKAC 1 cut(s) 19
Fnu4HI GCNGC 4 cut(s) 144, 220, 707, 831
FokI GGATG 4 cut(s) 72, 1190, 1214, 1232
FriOI GRGCYC 2 cut(s) 190, 475
Fsp4HI GCNGC 4 cut(s) 144, 220, 707, 831
FspBI CTAG 6 cut(s) 152, 227, 308, 689, 921, 1149
GluI GCNGC 4 cut(s) 144, 220, 707, 831
GsuI CTGGAG 1 cut(s) 551
HaeIII GGCC 3 cut(s) 222, 995, 1136
HapII CCGG 1 cut(s) 1065
Hin1II CATG 5 cut(s) 92, 595, 659, 962, 1090
HincII GTYRAC 1 cut(s) 103
HindII GTYRAC 1 cut(s) 103
HindIII AAGCTT 1 cut(s) 80
HinfI GANTC 7 cut(s) 104, 163, 535, 644, 924, 955, 1094
HpaII CCGG 1 cut(s) 1065
HphI GGTGA 5 cut(s) 780, 898, 1085, 1154, 1172
Hpy166II GTNNAC 2 cut(s) 20, 103
Hpy188I TCNGA 3 cut(s) 628, 816, 1008
Hpy188III TCNNGA 5 cut(s) 227, 320, 898, 921, 1098
Hpy8I GTNNAC 2 cut(s) 20, 103
HpyAV CCTTC 3 cut(s) 233, 563, 1075
HpyCH4III ACNGT 2 cut(s) 862, 1160
HpyCH4IV ACGT 1 cut(s) 1263
HpyCH4V TGCA 8 cut(s) 173, 444, 543, 578, 659, 772, 833, 1002
HpyF3I CTNAG 2 cut(s) 296, 1191
HpySE526I ACGT 1 cut(s) 1263
Hsp92II CATG 5 cut(s) 92, 595, 659, 962, 1090
Kzo9I GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
LmnI GCTCC 3 cut(s) 185, 478, 510
Lsp1109I GCAGC 2 cut(s) 130, 817
LweI GCATC 2 cut(s) 50, 878
MaeI CTAG 6 cut(s) 152, 227, 308, 689, 921, 1149
MaeII ACGT 1 cut(s) 1263
MaeIII GTNAC 1 cut(s) 261
MalI GATC 6 cut(s) 14, 201, 274, 634, 780, 1044
MboI GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
MboII GAAGA 6 cut(s) 194, 689, 737, 857, 916, 1241
MflI RGATCY 3 cut(s) 272, 632, 778
MhlI GDGCHC 3 cut(s) 190, 475, 507
MlsI TGGCCA 1 cut(s) 995
MluNI TGGCCA 1 cut(s) 995
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 1 cut(s) 822
Mox20I TGGCCA 1 cut(s) 995
MroXI GAANNNNTTC 2 cut(s) 162, 352
MscI TGGCCA 1 cut(s) 995
MseI TTAA 5 cut(s) 344, 420, 434, 857, 951
MslI CAYNNNNRTG 1 cut(s) 798
Msp20I TGGCCA 1 cut(s) 995
MspI CCGG 1 cut(s) 1065
MspR9I CCNGG 2 cut(s) 270, 684
Mva1269I GAATGC 2 cut(s) 912, 1002
MvaI CCWGG 2 cut(s) 270, 684
NcoI CCATGG 1 cut(s) 88
NdeII GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
NlaIII CATG 5 cut(s) 92, 595, 659, 962, 1090
NlaIV GGNNCC 1 cut(s) 474
PctI GAATGC 2 cut(s) 912, 1002
PdmI GAANNNNTTC 2 cut(s) 162, 352
PfeI GAWTC 6 cut(s) 163, 535, 644, 924, 955, 1094
PkrI GCNGC 4 cut(s) 145, 221, 708, 832
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
Ppu21I YACGTR 1 cut(s) 1264
PpuMI RGGWCCY 1 cut(s) 311
PsiI TTATAA 1 cut(s) 821
Psp124BI GAGCTC 1 cut(s) 190
Psp5II RGGWCCY 1 cut(s) 311
Psp6I CCWGG 2 cut(s) 268, 682
PspGI CCWGG 2 cut(s) 268, 682
PspN4I GGNNCC 1 cut(s) 474
PspPI GGNCC 1 cut(s) 311
PspPPI RGGWCCY 1 cut(s) 311
PsuI RGATCY 3 cut(s) 272, 632, 778
RsaI GTAC 2 cut(s) 864, 980
RsaNI GTAC 2 cut(s) 863, 979
RseI CAYNNNNRTG 1 cut(s) 798
SacI GAGCTC 1 cut(s) 190
SaqAI TTAA 5 cut(s) 344, 420, 434, 857, 951
SatI GCNGC 4 cut(s) 144, 220, 707, 831
Sau3AI GATC 6 cut(s) 12, 199, 272, 632, 778, 1042
Sau96I GGNCC 1 cut(s) 311
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 2 cut(s) 270, 684
SduI GDGCHC 3 cut(s) 190, 475, 507
SfaNI GCATC 2 cut(s) 50, 878
SinI GGWCC 1 cut(s) 311
SmiMI CAYNNNNRTG 1 cut(s) 798
SmlI CTYRAG 2 cut(s) 189, 761
SmoI CTYRAG 2 cut(s) 189, 761
SnaBI TACGTA 1 cut(s) 1264
SsiI CCGC 3 cut(s) 219, 706, 791
SspI AATATT 1 cut(s) 550
SspMI CTAG 6 cut(s) 152, 227, 308, 689, 921, 1149
SstI GAGCTC 1 cut(s) 190
StyD4I CCNGG 2 cut(s) 268, 682
StyI CCWWGG 3 cut(s) 88, 558, 967
TaaI ACNGT 2 cut(s) 862, 1160
TaiI ACGT 1 cut(s) 1266
TaqI TCGA 1 cut(s) 1041
TaqII GACCGA 1 cut(s) 506
TauI GCSGC 2 cut(s) 222, 709
TfiI GAWTC 6 cut(s) 163, 535, 644, 924, 955, 1094
Tru1I TTAA 5 cut(s) 344, 420, 434, 857, 951
Tru9I TTAA 5 cut(s) 344, 420, 434, 857, 951
TscAI CASTG 3 cut(s) 263, 451, 545
TseI GCWGC 2 cut(s) 143, 830
TspRI CASTG 3 cut(s) 263, 451, 545
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 6 cut(s) 4, 71, 383, 615, 848, 1257
XbaI TCTAGA 2 cut(s) 226, 920
XmiI GTMKAC 1 cut(s) 19
XmnI GAANNNNTTC 2 cut(s) 162, 352
XspI CTAG 6 cut(s) 152, 227, 308, 689, 921, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.