RchiOBHm_Chr3g0473771

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000230
Physical Location & Seq
Reverse (-)
19500205 .. 19501567
1363 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43943

Sequence Viewer

Length: 1287 bp
ATGGCGACGCCATATCATTCACTCTCCGCCATTGCAAGTTCTATTGTTATTCTCTTTCTCTTAGTTCGCTCTAATGCACAAGATAATGTTCCTCACCATGGCGGTGTTATTAGCCTCAACATGATCCATCGTGACACACCATCTTCTCCCTTATACAATTCGTCGTTAACTAATTGGCAACGAGTAAGCAATGCTTTGCGACGTTCACGTGATCGCATCAACCGTTTCACCTCATCAGAAGATGAATCGCCTGATCATCTAATGTACAGCGAAGGAGATTACCTGGTGAACATATCAATCGGTACACCACCAAGACCTTTCATTGGAATTGTTGACACCGGAAGCGATCTTATATGGACACAATGCATGCCATGCAGGCAATGTTTCGAGCAAAACCCTCCTCTCTTTGATCCAGCTTCTTCATCAACTTACAGAGCTCTTTCGTGTATGTCCAACGAATGTCGTTTGCTAAGACCAGCCTCCTTTTGTTCCATCGACACTGTTACGTTGGGTTCCACATCCATTCCCAAAACTATATTTGGTTGTGGACACCAAAATGGAGGAGATTTCAGTGGGATTGAGTCGGGAATTGTCGGACTAGGACGTGGAGCTGTGTCGTTTATCTCCCAAATAGGGGGGTATTTGGTTGGCGGGAAATATTTCTCTTATTGTTTGGTTCCTAATCCTGCAATGTCTTTCCTGTCTAATAACTCTAATGCAACCTCATCAAGCATGATGTATTTTGGTCGACCGAATACTTCATCAGGTCCTGAAGTGGTCACCACCCCTTTGCTTTCGAACGGTGTTAGCGCCACTCAAACCTTTTATATCGTTGAGCTTCAAGGCATTAGTGTTGGAGCCAACAATATCACACTTAATGCAGATGCCAAGGCCTTTAAGGGTAACATGATCATAGACTCGGGGACTACCTTAACGTACTTGCCGGAGTTGCTTTACGACAGTTTCAAATCAGCAATTGAAGAAGAACTTAAAGATCGAGATCTGGAGGTGAAGCAAGATCCGACTGGTTCTGGGCTGTCTTGTTTCTTGATTAAGTATGATATTCTTCCTGGCCCCAATGTCACTTTCCATTTTAAAGGAGCAGATGTGAAGCTAAAATCTTCCAACACTTTTGTTAGGGTGGATGATGAGACTGTTTGCTTAGCATTCTCCCGAGGCAGCGGTGTCGGAACCTATGGGAATTGGGCACAGATAAACTACTTGGTAGGATATGACCTTGAGAACAAGACTGTCTCCTTCCAGCCAACTGATTGTACAACTAGCTAG

Protein Analysis

428

Amino Acids

46.45

Weight (kDa)

5.4

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 94 - 155 3.8e-21 Xylanase inhibitor N-terminal
Asp PF00026 94 - 421 1.2e-25 Eukaryotic aspartyl protease
TAXi_N PF14543 164 - 249 4.4e-14 Xylanase inhibitor N-terminal
TAXi_C PF14541 276 - 421 4.3e-25 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000230)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g02620 FvH4_6g02640 FvH4_6g02690 FvH4_6g03060 FvH4_6g03100 FvH4_6g03360 FvH4_6g03370 FvH4_6g18770 FvH4_6g24220 FvH4_6g49710
malus_domestica MD04G1225600.v1.1 MD04G1227300.v1.1 MD12G1242600.v1.1 MD12G1242700.v1.1 MD12G1242800.v1.1
prunus_persica Prupe.2G103000_v2.0.a1 Prupe.6G344200_v2.0.a1 Prupe.6G344300_v2.0.a1 Prupe.6G344400_v2.0.a1 Prupe.6G346300_v2.0.a1 Prupe.6G346400_v2.0.a1
pyrus_communis pycom12g22170
rosa_chinensis RchiOBHm_Chr3g0450531 RchiOBHm_Chr3g0450541 RchiOBHm_Chr3g0450561 RchiOBHm_Chr3g0450681 RchiOBHm_Chr3g0450691 RchiOBHm_Chr3g0450711 RchiOBHm_Chr3g0451881 RchiOBHm_Chr3g0454771 RchiOBHm_Chr3g0473771 RchiOBHm_Chr3g0473781 RchiOBHm_Chr3g0477881 RchiOBHm_Chr6g0253861
rosa_laevigata RLG00000014956 RLG00000023682 RLG00000023683 RLG00000023985 RLG00000025416 RLG00000025641 RLG00000025642 RLG00000025708 RLG00000025710 RLG00000025711 RLG00000025720 RLG00000025722 RLG00000025723 RLG00000025733 RLG00000035252
rosa_multiflora Rmu_sc0034928.1_g000007
rosa_roxburghii Rroxscaffold_164G00436250 Rroxscaffold_1G00021590 Rroxscaffold_1G00029330 Rroxscaffold_1G00029340 Rroxscaffold_6G00403630 Rroxscaffold_6G00407810 Rroxscaffold_6G00424780 Rroxscaffold_6G00428220 Rroxscaffold_6G00428250 Rroxscaffold_6G00428270 Rroxscaffold_6G00428340 Rroxscaffold_6G00428350 Rroxscaffold_6G00428380 Rroxscaffold_7G00211410
rosa_rugosa Rorug01G0107600 Rorug01G0107600 Rorug02G0450900 Rorug02G0627600 Rorug02G0628400 Rorug02G0628500 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628700 Rorug02G0629600 Rorug02G0629700 Rorug02G0629800 Rorug02G0636700 Rorug03G0002400 Rorug03G0135400 Rorug03G0135500 Rorug03G0163700 Rorug05G0548500
rosa_samantha Rh2DG537800 Rh3AG029200 Rh3AG029300 Rh3AG029500 Rh3AG030500 Rh3AG030700 Rh3AG038600 Rh3AG062400 Rh3AG214300 Rh3BG029600 Rh3BG029700 Rh3BG029900 Rh3BG030800 Rh3BG031000 Rh3BG031200 Rh3BG039900 Rh3BG064300 Rh3BG214100 Rh3BG214300 Rh3BG247800 Rh3CG028500 Rh3CG028600 Rh3CG028800 Rh3CG029600 Rh3CG029800 Rh3CG030000 Rh3CG038400 Rh3CG063200 Rh3CG210800 Rh3CG211000 Rh3CG241900 Rh3DG029300 Rh3DG029400 Rh3DG029600 Rh3DG030400 Rh3DG030600 Rh3DG030900 Rh3DG039200 Rh3DG064000 Rh3DG210000 Rh3DG210200 Rh3DG241200 Rh6AG064000 Rh6BG000600 Rh6BG057900 Rh6CG008800 Rh6CG057800 Rh6DG009600 Rh6DG054800
rosa_wichuraiana Rw2G042600 Rw3G002250 Rw3G002270 Rw3G002340 Rw3G002350 Rw3G002370 Rw3G002890 Rw3G004860 Rw3G016980 Rw3G016990 Rw6G005680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 748
AciI CCGC 4 cut(s) 27, 102, 651, 1182
AclWI GGATC 3 cut(s) 118, 404, 1013
AcuI CTGAAG 1 cut(s) 792
AcvI CACGTG 1 cut(s) 209
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 4 cut(s) 266, 304, 938, 1276
AfiI CCNNNNNNNGG 4 cut(s) 98, 323, 633, 634
AgsI TTSAA 3 cut(s) 842, 967, 980
AjiI CACGTC 1 cut(s) 605
AjnI CCWGG 2 cut(s) 282, 1069
AjuI GAANNNNNNNTTGG 2 cut(s) 1070, 1102
AluBI AGCT 6 cut(s) 416, 437, 611, 838, 1114, 1284
AluI AGCT 6 cut(s) 416, 437, 611, 838, 1114, 1284
Alw21I GWGCWC 1 cut(s) 439
Alw26I GTCTC 2 cut(s) 1145, 1258
AlwI GGATC 3 cut(s) 118, 404, 1013
AlwNI CAGNNNCTG 1 cut(s) 770
Ama87I CYCGRG 2 cut(s) 919, 1173
AoxI GGCC 2 cut(s) 891, 1072
ApeKI GCWGC 1 cut(s) 1179
Asp700I GAANNNNTTC 1 cut(s) 659
AspLEI GCGC 1 cut(s) 812
AspS9I GGNCC 2 cut(s) 767, 1073
AsuHPI GGTGA 5 cut(s) 86, 220, 298, 772, 1021
AsuII TTCGAA 1 cut(s) 797
AvaI CYCGRG 2 cut(s) 919, 1173
AvaII GGWCC 1 cut(s) 767
BaeGI GKGCMC 1 cut(s) 1210
BanII GRGCYC 1 cut(s) 439
BbrPI CACGTG 1 cut(s) 209
Bbv12I GWGCWC 1 cut(s) 439
BbvI GCAGC 1 cut(s) 1191
BccI CCATC 3 cut(s) 135, 148, 500
BcgI CGANNNNNNTGC 2 cut(s) 1168, 1202
BciT130I CCWGG 2 cut(s) 284, 1071
BclI TGATCA 2 cut(s) 253, 909
BcoDI GTCTC 2 cut(s) 1145, 1258
BfaI CTAG 3 cut(s) 599, 1281, 1285
BfoI RGCGCY 1 cut(s) 813
BglI GCCNNNNNGGC 1 cut(s) 376
BglII AGATCT 1 cut(s) 1000
BisI GCNGC 1 cut(s) 1180
BlpI GCTNAGC 1 cut(s) 1162
BlsI GCNGC 1 cut(s) 1181
Bme1390I CCNGG 2 cut(s) 284, 1071
Bme18I GGWCC 1 cut(s) 767
BmeT110I CYCGRG 2 cut(s) 919, 1173
BmgBI CACGTC 1 cut(s) 605
BmgT120I GGNCC 2 cut(s) 767, 1073
BmiI GGNNCC 5 cut(s) 514, 678, 859, 1075, 1192
BmrFI CCNGG 2 cut(s) 284, 1071
BmsI GCATC 2 cut(s) 225, 874
BpmI CTGGAG 1 cut(s) 1025
Bpu1102I GCTNAGC 1 cut(s) 1162
Bpu14I TTCGAA 1 cut(s) 797
BpuEI CTTGAG 1 cut(s) 1259
BsaAI YACGTR 1 cut(s) 209
BsaBI GATNNNNATC 1 cut(s) 999
BsaHI GRCGYC 1 cut(s) 8
BsaJI CCNNGG 3 cut(s) 97, 888, 1174
BsaWI WCCGGW 1 cut(s) 338
BsaXI ACNNNNNCTCC 2 cut(s) 1092, 1122
Bsc4I CCNNNNNNNGG 4 cut(s) 98, 323, 633, 634
Bse1I ACTGG 1 cut(s) 1030
Bse3DI GCAATG 4 cut(s) 30, 196, 386, 696
Bse8I GATNNNNATC 1 cut(s) 999
BseBI CCWGG 2 cut(s) 284, 1071
BseDI CCNNGG 3 cut(s) 97, 888, 1174
BseGI GGATG 2 cut(s) 518, 1150
BseJI GATNNNNATC 1 cut(s) 999
BseLI CCNNNNNNNGG 4 cut(s) 98, 323, 633, 634
BseMI GCAATG 4 cut(s) 30, 196, 386, 696
BseNI ACTGG 1 cut(s) 1030
BseRI GAGGAG 2 cut(s) 390, 576
BseSI GKGCMC 1 cut(s) 1210
BseXI GCAGC 1 cut(s) 1191
Bsh1285I CGRYCG 1 cut(s) 752
BshFI GGCC 2 cut(s) 893, 1074
BsiEI CGRYCG 1 cut(s) 752
BsiHKAI GWGCWC 1 cut(s) 439
BsiHKCI CYCGRG 2 cut(s) 919, 1173
BsiSI CCGG 2 cut(s) 339, 944
BslFI GGGAC 1 cut(s) 937
BslI CCNNNNNNNGG 4 cut(s) 98, 323, 633, 634
BsmAI GTCTC 2 cut(s) 1145, 1258
BsmFI GGGAC 1 cut(s) 937
BsmI GAATGC 1 cut(s) 1166
BsnI GGCC 2 cut(s) 893, 1074
BsoBI CYCGRG 2 cut(s) 919, 1173
Bsp119I TTCGAA 1 cut(s) 797
Bsp1286I GDGCHC 2 cut(s) 439, 1210
Bsp1407I TGTACA 2 cut(s) 264, 1274
Bsp143I GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
Bsp1720I GCTNAGC 1 cut(s) 1162
Bsp19I CCATGG 1 cut(s) 97
BspACI CCGC 4 cut(s) 27, 102, 651, 1182
BspANI GGCC 2 cut(s) 893, 1074
BspLI GGNNCC 5 cut(s) 514, 678, 859, 1075, 1192
BspPI GGATC 3 cut(s) 118, 404, 1013
BspT104I TTCGAA 1 cut(s) 797
BsrDI GCAATG 4 cut(s) 30, 196, 386, 696
BsrGI TGTACA 2 cut(s) 264, 1274
BsrI ACTGG 1 cut(s) 1030
BssECI CCNNGG 3 cut(s) 97, 888, 1174
BssMI GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
BssNI GRCGYC 1 cut(s) 8
BssT1I CCWWGG 2 cut(s) 97, 888
Bst2UI CCWGG 2 cut(s) 284, 1071
Bst4CI ACNGT 6 cut(s) 224, 502, 803, 962, 1156, 1252
BstACI GRCGYC 1 cut(s) 8
BstAPI GCANNNNNTGC 1 cut(s) 372
BstAUI TGTACA 2 cut(s) 264, 1274
BstBAI YACGTR 1 cut(s) 209
BstBI TTCGAA 1 cut(s) 797
BstC8I GCNNGC 2 cut(s) 368, 377
BstDEI CTNAG 3 cut(s) 61, 470, 1162
BstDSI CCRYGG 1 cut(s) 97
BstEII GGTNACC 1 cut(s) 778
BstF5I GGATG 2 cut(s) 518, 1150
BstH2I RGCGCY 1 cut(s) 813
BstHHI GCGC 1 cut(s) 812
BstKTI GATC 9 cut(s) 126, 214, 256, 349, 412, 912, 997, 1003, 1021
BstMAI GTCTC 2 cut(s) 1145, 1258
BstMBI GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
BstMCI CGRYCG 1 cut(s) 752
BstMWI GCNNNNNNNGC 3 cut(s) 372, 376, 949
BstNI CCWGG 2 cut(s) 284, 1071
BstNSI RCATGY 1 cut(s) 370
BstPI GGTNACC 1 cut(s) 778
BstSCI CCNGG 2 cut(s) 282, 1069
BstSLI GKGCMC 1 cut(s) 1210
BstV1I GCAGC 1 cut(s) 1191
BstX2I RGATCY 2 cut(s) 1000, 1018
BstYI RGATCY 2 cut(s) 1000, 1018
BsuRI GGCC 2 cut(s) 893, 1074
BtgI CCRYGG 1 cut(s) 97
BtrI CACGTC 1 cut(s) 605
BtsCI GGATG 2 cut(s) 518, 1150
BtsIMutI CAGTG 2 cut(s) 498, 577
Cac8I GCNNGC 2 cut(s) 368, 377
CaiI CAGNNNCTG 1 cut(s) 770
CfoI GCGC 1 cut(s) 812
Cfr13I GGNCC 2 cut(s) 767, 1073
CseI GACGC 1 cut(s) 16
CsiI ACCWGGT 1 cut(s) 282
Csp6I GTAC 4 cut(s) 265, 303, 937, 1275
CviAII CATG 6 cut(s) 98, 121, 367, 372, 733, 907
CviQI GTAC 4 cut(s) 265, 303, 937, 1275
DdeI CTNAG 3 cut(s) 61, 470, 1162
DpnI GATC 9 cut(s) 125, 213, 255, 348, 411, 911, 996, 1002, 1020
DpnII GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
DraI TTTAAA 1 cut(s) 1096
EciI GGCGGA 1 cut(s) 16
Ecl136II GAGCTC 1 cut(s) 437
Eco130I CCWWGG 2 cut(s) 97, 888
Eco147I AGGCCT 1 cut(s) 893
Eco24I GRGCYC 1 cut(s) 439
Eco47I GGWCC 1 cut(s) 767
Eco53kI GAGCTC 1 cut(s) 437
Eco57I CTGAAG 1 cut(s) 792
Eco72I CACGTG 1 cut(s) 209
Eco88I CYCGRG 2 cut(s) 919, 1173
Eco91I GGTNACC 1 cut(s) 778
EcoICRI GAGCTC 1 cut(s) 437
EcoO109I RGGNCCY 1 cut(s) 767
EcoO65I GGTNACC 1 cut(s) 778
EcoRII CCWGG 2 cut(s) 282, 1069
EcoT14I CCWWGG 2 cut(s) 97, 888
EcoT22I ATGCAT 1 cut(s) 368
EcoT38I GRGCYC 1 cut(s) 439
ErhI CCWWGG 2 cut(s) 97, 888
FaeI CATG 6 cut(s) 101, 124, 370, 375, 736, 910
FalI AAGNNNNNCTT 4 cut(s) 178, 210, 972, 1004
FaqI GGGAC 1 cut(s) 937
FatI CATG 6 cut(s) 97, 120, 366, 371, 732, 906
FauI CCCGC 1 cut(s) 644
FbaI TGATCA 2 cut(s) 253, 909
FblI GTMKAC 1 cut(s) 748
Fnu4HI GCNGC 1 cut(s) 1180
FokI GGATG 2 cut(s) 505, 1157
FriOI GRGCYC 1 cut(s) 439
Fsp4HI GCNGC 1 cut(s) 1180
FspBI CTAG 3 cut(s) 599, 1281, 1285
GlaI GCGC 1 cut(s) 811
GluI GCNGC 1 cut(s) 1180
GsuI CTGGAG 1 cut(s) 1025
HaeII RGCGCY 1 cut(s) 813
HaeIII GGCC 2 cut(s) 893, 1074
HapII CCGG 2 cut(s) 339, 944
HgaI GACGC 1 cut(s) 16
HhaI GCGC 1 cut(s) 812
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 6 cut(s) 101, 124, 370, 375, 736, 910
Hin6I GCGC 1 cut(s) 810
HinP1I GCGC 1 cut(s) 810
HincII GTYRAC 3 cut(s) 168, 334, 749
HindII GTYRAC 3 cut(s) 168, 334, 749
HinfI GANTC 3 cut(s) 245, 581, 917
HpaI GTTAAC 1 cut(s) 168
HpaII CCGG 2 cut(s) 339, 944
HphI GGTGA 5 cut(s) 86, 220, 298, 772, 1021
Hpy166II GTNNAC 7 cut(s) 168, 206, 289, 305, 334, 548, 749
Hpy188I TCNGA 4 cut(s) 238, 596, 1023, 1190
Hpy188III TCNNGA 7 cut(s) 131, 585, 770, 998, 1004, 1048, 1173
Hpy8I GTNNAC 7 cut(s) 168, 206, 289, 305, 334, 548, 749
Hpy99I CGWCG 3 cut(s) 10, 166, 204
HpyAV CCTTC 2 cut(s) 266, 1267
HpyCH4III ACNGT 6 cut(s) 224, 502, 803, 962, 1156, 1252
HpyCH4IV ACGT 5 cut(s) 202, 208, 506, 604, 935
HpyCH4V TGCA 7 cut(s) 35, 77, 366, 375, 689, 719, 881
HpyF10VI GCNNNNNNNGC 3 cut(s) 372, 376, 949
HpyF3I CTNAG 3 cut(s) 61, 470, 1162
HpySE526I ACGT 5 cut(s) 202, 208, 506, 604, 935
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 6 cut(s) 101, 124, 370, 375, 736, 910
HspAI GCGC 1 cut(s) 810
Ksp22I TGATCA 2 cut(s) 253, 909
KspAI GTTAAC 1 cut(s) 168
Kzo9I GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
LmnI GCTCC 3 cut(s) 608, 857, 1100
Lsp1109I GCAGC 1 cut(s) 1191
LweI GCATC 2 cut(s) 225, 874
MabI ACCWGGT 1 cut(s) 282
MaeI CTAG 3 cut(s) 599, 1281, 1285
MaeII ACGT 5 cut(s) 202, 208, 506, 604, 935
MaeIII GTNAC 5 cut(s) 131, 502, 778, 902, 1081
MalI GATC 9 cut(s) 125, 213, 255, 348, 411, 911, 996, 1002, 1020
MboI GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
MboII GAAGA 7 cut(s) 135, 251, 411, 992, 995, 1058, 1113
MfeI CAATTG 1 cut(s) 975
MflI RGATCY 2 cut(s) 1000, 1018
MhlI GDGCHC 2 cut(s) 439, 1210
MluCI AATT 6 cut(s) 157, 172, 327, 588, 975, 1201
MlyI GAGTC 2 cut(s) 590, 911
MmeI TCCRAC 6 cut(s) 477, 574, 835, 1046, 1149, 1168
Mph1103I ATGCAT 1 cut(s) 368
MroXI GAANNNNTTC 1 cut(s) 659
MseI TTAA 7 cut(s) 167, 876, 897, 932, 990, 1053, 1095
MslI CAYNNNNRTG 2 cut(s) 102, 555
MspA1I CMGCKG 1 cut(s) 1182
MspI CCGG 2 cut(s) 339, 944
MspR9I CCNGG 2 cut(s) 284, 1071
MunI CAATTG 1 cut(s) 975
Mva1269I GAATGC 1 cut(s) 1166
MvaI CCWGG 2 cut(s) 284, 1071
MwoI GCNNNNNNNGC 3 cut(s) 372, 376, 949
NcoI CCATGG 1 cut(s) 97
NdeII GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
NlaIII CATG 6 cut(s) 101, 124, 370, 375, 736, 910
NlaIV GGNNCC 5 cut(s) 514, 678, 859, 1075, 1192
NmuCI GTSAC 3 cut(s) 131, 778, 1081
NsiI ATGCAT 1 cut(s) 368
NspI RCATGY 1 cut(s) 370
NspV TTCGAA 1 cut(s) 797
PaeI GCATGC 1 cut(s) 370
PceI AGGCCT 1 cut(s) 893
PcsI WCGNNNNNNNCGW 1 cut(s) 220
PctI GAATGC 1 cut(s) 1166
PdmI GAANNNNTTC 1 cut(s) 659
PfeI GAWTC 1 cut(s) 245
PkrI GCNGC 1 cut(s) 1181
PleI GAGTC 2 cut(s) 589, 911
PmaCI CACGTG 1 cut(s) 209
PmlI CACGTG 1 cut(s) 209
PpsI GAGTC 2 cut(s) 589, 911
Ppu21I YACGTR 1 cut(s) 209
PpuMI RGGWCCY 1 cut(s) 767
Psp124BI GAGCTC 1 cut(s) 439
Psp5II RGGWCCY 1 cut(s) 767
Psp6I CCWGG 2 cut(s) 282, 1069
PspCI CACGTG 1 cut(s) 209
PspEI GGTNACC 1 cut(s) 778
PspGI CCWGG 2 cut(s) 282, 1069
PspN4I GGNNCC 5 cut(s) 514, 678, 859, 1075, 1192
PspPI GGNCC 2 cut(s) 767, 1073
PspPPI RGGWCCY 1 cut(s) 767
PstNI CAGNNNCTG 1 cut(s) 770
PsuI RGATCY 2 cut(s) 1000, 1018
RsaI GTAC 4 cut(s) 266, 304, 938, 1276
RsaNI GTAC 4 cut(s) 265, 303, 937, 1275
RseI CAYNNNNRTG 2 cut(s) 102, 555
SacI GAGCTC 1 cut(s) 439
SalI GTCGAC 1 cut(s) 747
SaqAI TTAA 7 cut(s) 167, 876, 897, 932, 990, 1053, 1095
SatI GCNGC 1 cut(s) 1180
Sau3AI GATC 9 cut(s) 123, 211, 253, 346, 409, 909, 994, 1000, 1018
Sau96I GGNCC 2 cut(s) 767, 1073
SchI GAGTC 2 cut(s) 590, 911
ScrFI CCNGG 2 cut(s) 284, 1071
SduI GDGCHC 2 cut(s) 439, 1210
SexAI ACCWGGT 1 cut(s) 282
SfaNI GCATC 2 cut(s) 225, 874
SfuI TTCGAA 1 cut(s) 797
SinI GGWCC 1 cut(s) 767
SmiMI CAYNNNNRTG 2 cut(s) 102, 555
SmlI CTYRAG 1 cut(s) 1238
SmoI CTYRAG 1 cut(s) 1238
SphI GCATGC 1 cut(s) 370
Sse9I AATT 6 cut(s) 157, 172, 327, 588, 975, 1201
SseBI AGGCCT 1 cut(s) 893
SsiI CCGC 4 cut(s) 27, 102, 651, 1182
SspI AATATT 1 cut(s) 659
SspMI CTAG 3 cut(s) 599, 1281, 1285
SstI GAGCTC 1 cut(s) 439
StuI AGGCCT 1 cut(s) 893
StyD4I CCNGG 2 cut(s) 282, 1069
StyI CCWWGG 2 cut(s) 97, 888
TaaI ACNGT 6 cut(s) 224, 502, 803, 962, 1156, 1252
TaiI ACGT 5 cut(s) 205, 211, 509, 607, 938
TaqI TCGA 5 cut(s) 387, 495, 748, 797, 997
TaqII GACCGA 1 cut(s) 766
TasI AATT 6 cut(s) 157, 172, 327, 588, 975, 1201
TatI WGTACW 2 cut(s) 264, 1274
TfiI GAWTC 1 cut(s) 245
Tru1I TTAA 7 cut(s) 167, 876, 897, 932, 990, 1053, 1095
Tru9I TTAA 7 cut(s) 167, 876, 897, 932, 990, 1053, 1095
TscAI CASTG 2 cut(s) 505, 577
TseFI GTSAC 3 cut(s) 131, 778, 1081
TseI GCWGC 1 cut(s) 1179
Tsp45I GTSAC 3 cut(s) 131, 778, 1081
TspDTI ATGAA 4 cut(s) 258, 310, 411, 750
TspRI CASTG 2 cut(s) 505, 577
VpaK11BI GGWCC 1 cut(s) 767
XceI RCATGY 1 cut(s) 370
XmiI GTMKAC 1 cut(s) 748
XmnI GAANNNNTTC 1 cut(s) 659
XspI CTAG 3 cut(s) 599, 1281, 1285
Zsp2I ATGCAT 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.