Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0000230

Physical Location & Seq

Genomic Coordinates Reverse (-)

19275997 .. 19277359

Gene Structure 1363 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG210800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGGCGACGCCATATCATTCACTCTCCGCCATTGCAAGTTCTATTGTTATTCTCTTTCTCTTAGTTCGCTCTAATGCACAAGATAATGTTCCTCACCATGGCGGTGTTATTAGCCTCAACATGATCCATCGTGACACACCATCTTCTCCCTTATACAATTCGTCGTTAACTAATTGGCAACGAGTAAGCAATGCTTTGCGACGTTCACGTGATCGCATCAACCGTTTCACCTCATCAGAAGATGAATCGCCTGATCATCTAATGTACAGCGAAGGAGATTACCTGGTGAACATATCAATCGGTACACCACCAAGACCTTTCATTGGAATTGTTGACACCGGAAGCGATCTTATATGGACACAATGCATGCCATGCAGGCAATGTTTCGAGCAAAACCCTCCTCTCTTTGATCCAGCTTCTTCATCAACTTACAGAGCTCTTTCGTTCGACACTGTTACGTTGGGTTCCACATCCATTCCCAAAACTATATTTGGTTGTGGACACCAAAATGGAGGAGATTTCAGTGGGATTGAGTCGGGAATTGTCGGACTAGGACGTGGAGCTGTGTCGTTTATCTCCCAAATAGGGGGGTATTTGGTTGGCGGGAAATATTTCTCTTATTGTTTGGTTCCTAATCCTGCAATGTCTTTCCTGTCTAATAACTCTAATGCAACCTCATCAAGCATGATGTATTTTGGTCGACCGAATACTTCATCAGGTCCTGAAGTGGTCACCACCCCTTTGCTTTCGAACGGTGTTAGCGCCACTCAAACCTTTTATATCGTTGAGCTTCAAGGCATTAGTGTTGGAGCCAACAATATCACACTTAATGCAGATGCCAAGGCCTTTAAGGGTAACATGATCATAGACTCGGGGACTACCTTAACGTACTTGCCGGAGTTGCTTTACGACAGTTTCAAATCAGCAATTGAAGAAGAACTTAAAGATCGAGATCTGGAGGTGAAGCAAGATCCGACTGGTTCTGGGCTGTCTTGTTTCTTGATTAAGTATGATATTCTTCCTGGCCCCAATGTCACTTTCCATTTTAAAGGAGCAGATGTGAAGCTAAAATCTTCCAACACTTTTGTTAGGGTGGATGATGAGACTGTTTGCTTAGCATTCTCCCGAGGCAGCGGTGTCGGAACCTATGGGAATTGGGCACAGATAAACTACTTGGTAGGATATGACCTTGAGAACAAGACTGTCTCCTTCCAGCCAACTGATTGTACAACTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

412

Amino Acids

44.69

Weight (kDa)

5.27

Isoelectric Point (pI)

38.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	94 - 149	3.4e-17	Xylanase inhibitor N-terminal
Asp	PF00026	94 - 405	4e-22	Eukaryotic aspartyl protease
TAXi_N	PF14543	147 - 233	3e-14	Xylanase inhibitor N-terminal
TAXi_C	PF14541	260 - 405	4e-25	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000230)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g02620 FvH4_6g02640 FvH4_6g02690 FvH4_6g03060 FvH4_6g03100 FvH4_6g03360 FvH4_6g03370 FvH4_6g18770 FvH4_6g24220 FvH4_6g49710
malus_domestica	MD04G1225600.v1.1 MD04G1227300.v1.1 MD12G1242600.v1.1 MD12G1242700.v1.1 MD12G1242800.v1.1
prunus_persica	Prupe.2G103000_v2.0.a1 Prupe.6G344200_v2.0.a1 Prupe.6G344300_v2.0.a1 Prupe.6G344400_v2.0.a1 Prupe.6G346300_v2.0.a1 Prupe.6G346400_v2.0.a1
pyrus_communis	pycom12g22170
rosa_chinensis	RchiOBHm_Chr3g0450531 RchiOBHm_Chr3g0450541 RchiOBHm_Chr3g0450561 RchiOBHm_Chr3g0450681 RchiOBHm_Chr3g0450691 RchiOBHm_Chr3g0450711 RchiOBHm_Chr3g0451881 RchiOBHm_Chr3g0454771 RchiOBHm_Chr3g0473771 RchiOBHm_Chr3g0473781 RchiOBHm_Chr3g0477881 RchiOBHm_Chr6g0253861
rosa_laevigata	RLG00000014956 RLG00000023682 RLG00000023683 RLG00000023985 RLG00000025416 RLG00000025641 RLG00000025642 RLG00000025708 RLG00000025710 RLG00000025711 RLG00000025720 RLG00000025722 RLG00000025723 RLG00000025733 RLG00000035252
rosa_multiflora	Rmu_sc0034928.1_g000007
rosa_roxburghii	Rroxscaffold_164G00436250 Rroxscaffold_1G00021590 Rroxscaffold_1G00029330 Rroxscaffold_1G00029340 Rroxscaffold_6G00403630 Rroxscaffold_6G00407810 Rroxscaffold_6G00424780 Rroxscaffold_6G00428220 Rroxscaffold_6G00428250 Rroxscaffold_6G00428270 Rroxscaffold_6G00428340 Rroxscaffold_6G00428350 Rroxscaffold_6G00428380 Rroxscaffold_7G00211410
rosa_rugosa	Rorug01G0107600 Rorug01G0107600 Rorug02G0450900 Rorug02G0627600 Rorug02G0628400 Rorug02G0628500 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628700 Rorug02G0629600 Rorug02G0629700 Rorug02G0629800 Rorug02G0636700 Rorug03G0002400 Rorug03G0135400 Rorug03G0135500 Rorug03G0163700 Rorug05G0548500
rosa_samantha	Rh2DG537800 Rh3AG029200 Rh3AG029300 Rh3AG029500 Rh3AG030500 Rh3AG030700 Rh3AG038600 Rh3AG062400 Rh3AG214300 Rh3BG029600 Rh3BG029700 Rh3BG029900 Rh3BG030800 Rh3BG031000 Rh3BG031200 Rh3BG039900 Rh3BG064300 Rh3BG214100 Rh3BG214300 Rh3BG247800 Rh3CG028500 Rh3CG028600 Rh3CG028800 Rh3CG029600 Rh3CG029800 Rh3CG030000 Rh3CG038400 Rh3CG063200 Rh3CG210800 Rh3CG211000 Rh3CG241900 Rh3DG029300 Rh3DG029400 Rh3DG029600 Rh3DG030400 Rh3DG030600 Rh3DG030900 Rh3DG039200 Rh3DG064000 Rh3DG210000 Rh3DG210200 Rh3DG241200 Rh6AG064000 Rh6BG000600 Rh6BG057900 Rh6CG008800 Rh6CG057800 Rh6DG009600 Rh6DG054800
rosa_wichuraiana	Rw2G042600 Rw3G002250 Rw3G002270 Rw3G002340 Rw3G002350 Rw3G002370 Rw3G002890 Rw3G004860 Rw3G016980 Rw3G016990 Rw6G005680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	700
AciI	CCGC	4 cut(s)	27, 102, 603, 1134
AclWI	GGATC	3 cut(s)	118, 404, 965
AcuI	CTGAAG	1 cut(s)	744
AcvI	CACGTG	1 cut(s)	209
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	4 cut(s)	266, 304, 890, 1228
AfiI	CCNNNNNNNGG	4 cut(s)	98, 323, 585, 586
AgsI	TTSAA	3 cut(s)	794, 919, 932
AjiI	CACGTC	1 cut(s)	557
AjnI	CCWGG	2 cut(s)	282, 1021
AjuI	GAANNNNNNNTTGG	2 cut(s)	1022, 1054
AluBI	AGCT	6 cut(s)	416, 437, 563, 790, 1066, 1236
AluI	AGCT	6 cut(s)	416, 437, 563, 790, 1066, 1236
Alw21I	GWGCWC	1 cut(s)	439
Alw26I	GTCTC	2 cut(s)	1097, 1210
AlwI	GGATC	3 cut(s)	118, 404, 965
AlwNI	CAGNNNCTG	1 cut(s)	722
Ama87I	CYCGRG	2 cut(s)	871, 1125
AoxI	GGCC	2 cut(s)	843, 1024
ApeKI	GCWGC	1 cut(s)	1131
Asp700I	GAANNNNTTC	1 cut(s)	611
AspLEI	GCGC	1 cut(s)	764
AspS9I	GGNCC	2 cut(s)	719, 1025
AsuHPI	GGTGA	5 cut(s)	86, 220, 298, 724, 973
AsuII	TTCGAA	1 cut(s)	749
AvaI	CYCGRG	2 cut(s)	871, 1125
AvaII	GGWCC	1 cut(s)	719
BaeGI	GKGCMC	1 cut(s)	1162
BanII	GRGCYC	1 cut(s)	439
BbrPI	CACGTG	1 cut(s)	209
Bbv12I	GWGCWC	1 cut(s)	439
BbvI	GCAGC	1 cut(s)	1143
BccI	CCATC	2 cut(s)	135, 148
BcgI	CGANNNNNNTGC	2 cut(s)	1120, 1154
BciT130I	CCWGG	2 cut(s)	284, 1023
BclI	TGATCA	2 cut(s)	253, 861
BcoDI	GTCTC	2 cut(s)	1097, 1210
BfaI	CTAG	3 cut(s)	551, 1233, 1237
BfoI	RGCGCY	1 cut(s)	765
BglI	GCCNNNNNGGC	1 cut(s)	376
BglII	AGATCT	1 cut(s)	952
BisI	GCNGC	1 cut(s)	1132
BlpI	GCTNAGC	1 cut(s)	1114
BlsI	GCNGC	1 cut(s)	1133
Bme1390I	CCNGG	2 cut(s)	284, 1023
Bme18I	GGWCC	1 cut(s)	719
BmeT110I	CYCGRG	2 cut(s)	871, 1125
BmgBI	CACGTC	1 cut(s)	557
BmgT120I	GGNCC	2 cut(s)	719, 1025
BmiI	GGNNCC	5 cut(s)	466, 630, 811, 1027, 1144
BmrFI	CCNGG	2 cut(s)	284, 1023
BmsI	GCATC	2 cut(s)	225, 826
BpmI	CTGGAG	1 cut(s)	977
Bpu1102I	GCTNAGC	1 cut(s)	1114
Bpu14I	TTCGAA	1 cut(s)	749
BpuEI	CTTGAG	1 cut(s)	1211
BsaAI	YACGTR	1 cut(s)	209
BsaBI	GATNNNNATC	1 cut(s)	951
BsaHI	GRCGYC	1 cut(s)	8
BsaJI	CCNNGG	3 cut(s)	97, 840, 1126
BsaWI	WCCGGW	1 cut(s)	338
BsaXI	ACNNNNNCTCC	2 cut(s)	1044, 1074
Bsc4I	CCNNNNNNNGG	4 cut(s)	98, 323, 585, 586
Bse1I	ACTGG	1 cut(s)	982
Bse3DI	GCAATG	4 cut(s)	30, 196, 386, 648
Bse8I	GATNNNNATC	1 cut(s)	951
BseBI	CCWGG	2 cut(s)	284, 1023
BseDI	CCNNGG	3 cut(s)	97, 840, 1126
BseGI	GGATG	2 cut(s)	470, 1102
BseJI	GATNNNNATC	1 cut(s)	951
BseLI	CCNNNNNNNGG	4 cut(s)	98, 323, 585, 586
BseMI	GCAATG	4 cut(s)	30, 196, 386, 648
BseNI	ACTGG	1 cut(s)	982
BseRI	GAGGAG	2 cut(s)	390, 528
BseSI	GKGCMC	1 cut(s)	1162
BseXI	GCAGC	1 cut(s)	1143
Bsh1285I	CGRYCG	1 cut(s)	704
BshFI	GGCC	2 cut(s)	845, 1026
BsiEI	CGRYCG	1 cut(s)	704
BsiHKAI	GWGCWC	1 cut(s)	439
BsiHKCI	CYCGRG	2 cut(s)	871, 1125
BsiSI	CCGG	2 cut(s)	339, 896
BslFI	GGGAC	1 cut(s)	889
BslI	CCNNNNNNNGG	4 cut(s)	98, 323, 585, 586
BsmAI	GTCTC	2 cut(s)	1097, 1210
BsmFI	GGGAC	1 cut(s)	889
BsmI	GAATGC	1 cut(s)	1118
BsnI	GGCC	2 cut(s)	845, 1026
BsoBI	CYCGRG	2 cut(s)	871, 1125
Bsp119I	TTCGAA	1 cut(s)	749
Bsp1286I	GDGCHC	2 cut(s)	439, 1162
Bsp1407I	TGTACA	2 cut(s)	264, 1226
Bsp143I	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
Bsp1720I	GCTNAGC	1 cut(s)	1114
Bsp19I	CCATGG	1 cut(s)	97
BspACI	CCGC	4 cut(s)	27, 102, 603, 1134
BspANI	GGCC	2 cut(s)	845, 1026
BspLI	GGNNCC	5 cut(s)	466, 630, 811, 1027, 1144
BspPI	GGATC	3 cut(s)	118, 404, 965
BspT104I	TTCGAA	1 cut(s)	749
BsrDI	GCAATG	4 cut(s)	30, 196, 386, 648
BsrGI	TGTACA	2 cut(s)	264, 1226
BsrI	ACTGG	1 cut(s)	982
BssECI	CCNNGG	3 cut(s)	97, 840, 1126
BssMI	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
BssNI	GRCGYC	1 cut(s)	8
BssT1I	CCWWGG	2 cut(s)	97, 840
Bst2UI	CCWGG	2 cut(s)	284, 1023
Bst4CI	ACNGT	6 cut(s)	224, 454, 755, 914, 1108, 1204
BstACI	GRCGYC	1 cut(s)	8
BstAPI	GCANNNNNTGC	1 cut(s)	372
BstAUI	TGTACA	2 cut(s)	264, 1226
BstBAI	YACGTR	1 cut(s)	209
BstBI	TTCGAA	1 cut(s)	749
BstC8I	GCNNGC	2 cut(s)	368, 377
BstDEI	CTNAG	2 cut(s)	61, 1114
BstDSI	CCRYGG	1 cut(s)	97
BstEII	GGTNACC	1 cut(s)	730
BstF5I	GGATG	2 cut(s)	470, 1102
BstH2I	RGCGCY	1 cut(s)	765
BstHHI	GCGC	1 cut(s)	764
BstKTI	GATC	9 cut(s)	126, 214, 256, 349, 412, 864, 949, 955, 973
BstMAI	GTCTC	2 cut(s)	1097, 1210
BstMBI	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
BstMCI	CGRYCG	1 cut(s)	704
BstMWI	GCNNNNNNNGC	3 cut(s)	372, 376, 901
BstNI	CCWGG	2 cut(s)	284, 1023
BstNSI	RCATGY	1 cut(s)	370
BstPI	GGTNACC	1 cut(s)	730
BstSCI	CCNGG	2 cut(s)	282, 1021
BstSLI	GKGCMC	1 cut(s)	1162
BstV1I	GCAGC	1 cut(s)	1143
BstX2I	RGATCY	2 cut(s)	952, 970
BstYI	RGATCY	2 cut(s)	952, 970
BsuRI	GGCC	2 cut(s)	845, 1026
BtgI	CCRYGG	1 cut(s)	97
BtrI	CACGTC	1 cut(s)	557
BtsCI	GGATG	2 cut(s)	470, 1102
BtsIMutI	CAGTG	2 cut(s)	450, 529
Cac8I	GCNNGC	2 cut(s)	368, 377
CaiI	CAGNNNCTG	1 cut(s)	722
CfoI	GCGC	1 cut(s)	764
Cfr13I	GGNCC	2 cut(s)	719, 1025
CseI	GACGC	1 cut(s)	16
CsiI	ACCWGGT	1 cut(s)	282
Csp6I	GTAC	4 cut(s)	265, 303, 889, 1227
CviAII	CATG	6 cut(s)	98, 121, 367, 372, 685, 859
CviQI	GTAC	4 cut(s)	265, 303, 889, 1227
DdeI	CTNAG	2 cut(s)	61, 1114
DpnI	GATC	9 cut(s)	125, 213, 255, 348, 411, 863, 948, 954, 972
DpnII	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
DraI	TTTAAA	1 cut(s)	1048
EciI	GGCGGA	1 cut(s)	16
Ecl136II	GAGCTC	1 cut(s)	437
Eco130I	CCWWGG	2 cut(s)	97, 840
Eco147I	AGGCCT	1 cut(s)	845
Eco24I	GRGCYC	1 cut(s)	439
Eco47I	GGWCC	1 cut(s)	719
Eco53kI	GAGCTC	1 cut(s)	437
Eco57I	CTGAAG	1 cut(s)	744
Eco72I	CACGTG	1 cut(s)	209
Eco88I	CYCGRG	2 cut(s)	871, 1125
Eco91I	GGTNACC	1 cut(s)	730
EcoICRI	GAGCTC	1 cut(s)	437
EcoO109I	RGGNCCY	1 cut(s)	719
EcoO65I	GGTNACC	1 cut(s)	730
EcoRII	CCWGG	2 cut(s)	282, 1021
EcoT14I	CCWWGG	2 cut(s)	97, 840
EcoT22I	ATGCAT	1 cut(s)	368
EcoT38I	GRGCYC	1 cut(s)	439
ErhI	CCWWGG	2 cut(s)	97, 840
FaeI	CATG	6 cut(s)	101, 124, 370, 375, 688, 862
FalI	AAGNNNNNCTT	4 cut(s)	178, 210, 924, 956
FaqI	GGGAC	1 cut(s)	889
FatI	CATG	6 cut(s)	97, 120, 366, 371, 684, 858
FauI	CCCGC	1 cut(s)	596
FbaI	TGATCA	2 cut(s)	253, 861
FblI	GTMKAC	1 cut(s)	700
Fnu4HI	GCNGC	1 cut(s)	1132
FokI	GGATG	2 cut(s)	457, 1109
FriOI	GRGCYC	1 cut(s)	439
Fsp4HI	GCNGC	1 cut(s)	1132
FspBI	CTAG	3 cut(s)	551, 1233, 1237
GlaI	GCGC	1 cut(s)	763
GluI	GCNGC	1 cut(s)	1132
GsuI	CTGGAG	1 cut(s)	977
HaeII	RGCGCY	1 cut(s)	765
HaeIII	GGCC	2 cut(s)	845, 1026
HapII	CCGG	2 cut(s)	339, 896
HgaI	GACGC	1 cut(s)	16
HhaI	GCGC	1 cut(s)	764
Hin1I	GRCGYC	1 cut(s)	8
Hin1II	CATG	6 cut(s)	101, 124, 370, 375, 688, 862
Hin6I	GCGC	1 cut(s)	762
HinP1I	GCGC	1 cut(s)	762
HincII	GTYRAC	3 cut(s)	168, 334, 701
HindII	GTYRAC	3 cut(s)	168, 334, 701
HinfI	GANTC	3 cut(s)	245, 533, 869
HpaI	GTTAAC	1 cut(s)	168
HpaII	CCGG	2 cut(s)	339, 896
HphI	GGTGA	5 cut(s)	86, 220, 298, 724, 973
Hpy166II	GTNNAC	7 cut(s)	168, 206, 289, 305, 334, 500, 701
Hpy188I	TCNGA	4 cut(s)	238, 548, 975, 1142
Hpy188III	TCNNGA	7 cut(s)	131, 537, 722, 950, 956, 1000, 1125
Hpy8I	GTNNAC	7 cut(s)	168, 206, 289, 305, 334, 500, 701
Hpy99I	CGWCG	3 cut(s)	10, 166, 204
HpyAV	CCTTC	2 cut(s)	266, 1219
HpyCH4III	ACNGT	6 cut(s)	224, 454, 755, 914, 1108, 1204
HpyCH4IV	ACGT	5 cut(s)	202, 208, 458, 556, 887
HpyCH4V	TGCA	7 cut(s)	35, 77, 366, 375, 641, 671, 833
HpyF10VI	GCNNNNNNNGC	3 cut(s)	372, 376, 901
HpyF3I	CTNAG	2 cut(s)	61, 1114
HpySE526I	ACGT	5 cut(s)	202, 208, 458, 556, 887
Hsp92I	GRCGYC	1 cut(s)	8
Hsp92II	CATG	6 cut(s)	101, 124, 370, 375, 688, 862
HspAI	GCGC	1 cut(s)	762
Ksp22I	TGATCA	2 cut(s)	253, 861
KspAI	GTTAAC	1 cut(s)	168
Kzo9I	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
LmnI	GCTCC	3 cut(s)	560, 809, 1052
Lsp1109I	GCAGC	1 cut(s)	1143
LweI	GCATC	2 cut(s)	225, 826
MabI	ACCWGGT	1 cut(s)	282
MaeI	CTAG	3 cut(s)	551, 1233, 1237
MaeII	ACGT	5 cut(s)	202, 208, 458, 556, 887
MaeIII	GTNAC	5 cut(s)	131, 454, 730, 854, 1033
MalI	GATC	9 cut(s)	125, 213, 255, 348, 411, 863, 948, 954, 972
MboI	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
MboII	GAAGA	7 cut(s)	135, 251, 411, 944, 947, 1010, 1065
MfeI	CAATTG	1 cut(s)	927
MflI	RGATCY	2 cut(s)	952, 970
MhlI	GDGCHC	2 cut(s)	439, 1162
MluCI	AATT	6 cut(s)	157, 172, 327, 540, 927, 1153
MlyI	GAGTC	2 cut(s)	542, 863
MmeI	TCCRAC	5 cut(s)	526, 787, 998, 1101, 1120
MnlI	CCTC	9 cut(s)	102, 125, 241, 408, 411, 506, 685, 952, 1121
Mph1103I	ATGCAT	1 cut(s)	368
MroXI	GAANNNNTTC	1 cut(s)	611
MseI	TTAA	7 cut(s)	167, 828, 849, 884, 942, 1005, 1047
MslI	CAYNNNNRTG	2 cut(s)	102, 507
MspA1I	CMGCKG	1 cut(s)	1134
MspI	CCGG	2 cut(s)	339, 896
MspR9I	CCNGG	2 cut(s)	284, 1023
MunI	CAATTG	1 cut(s)	927
Mva1269I	GAATGC	1 cut(s)	1118
MvaI	CCWGG	2 cut(s)	284, 1023
MwoI	GCNNNNNNNGC	3 cut(s)	372, 376, 901
NcoI	CCATGG	1 cut(s)	97
NdeII	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
NlaIII	CATG	6 cut(s)	101, 124, 370, 375, 688, 862
NlaIV	GGNNCC	5 cut(s)	466, 630, 811, 1027, 1144
NmuCI	GTSAC	3 cut(s)	131, 730, 1033
NsiI	ATGCAT	1 cut(s)	368
NspI	RCATGY	1 cut(s)	370
NspV	TTCGAA	1 cut(s)	749
PaeI	GCATGC	1 cut(s)	370
PceI	AGGCCT	1 cut(s)	845
PcsI	WCGNNNNNNNCGW	1 cut(s)	220
PctI	GAATGC	1 cut(s)	1118
PdmI	GAANNNNTTC	1 cut(s)	611
PfeI	GAWTC	1 cut(s)	245
PkrI	GCNGC	1 cut(s)	1133
PleI	GAGTC	2 cut(s)	541, 863
PmaCI	CACGTG	1 cut(s)	209
PmlI	CACGTG	1 cut(s)	209
PpsI	GAGTC	2 cut(s)	541, 863
Ppu21I	YACGTR	1 cut(s)	209
PpuMI	RGGWCCY	1 cut(s)	719
Psp124BI	GAGCTC	1 cut(s)	439
Psp5II	RGGWCCY	1 cut(s)	719
Psp6I	CCWGG	2 cut(s)	282, 1021
PspCI	CACGTG	1 cut(s)	209
PspEI	GGTNACC	1 cut(s)	730
PspGI	CCWGG	2 cut(s)	282, 1021
PspN4I	GGNNCC	5 cut(s)	466, 630, 811, 1027, 1144
PspPI	GGNCC	2 cut(s)	719, 1025
PspPPI	RGGWCCY	1 cut(s)	719
PstNI	CAGNNNCTG	1 cut(s)	722
PsuI	RGATCY	2 cut(s)	952, 970
RsaI	GTAC	4 cut(s)	266, 304, 890, 1228
RsaNI	GTAC	4 cut(s)	265, 303, 889, 1227
RseI	CAYNNNNRTG	2 cut(s)	102, 507
SacI	GAGCTC	1 cut(s)	439
SalI	GTCGAC	1 cut(s)	699
SaqAI	TTAA	7 cut(s)	167, 828, 849, 884, 942, 1005, 1047
SatI	GCNGC	1 cut(s)	1132
Sau3AI	GATC	9 cut(s)	123, 211, 253, 346, 409, 861, 946, 952, 970
Sau96I	GGNCC	2 cut(s)	719, 1025
SchI	GAGTC	2 cut(s)	542, 863
ScrFI	CCNGG	2 cut(s)	284, 1023
SduI	GDGCHC	2 cut(s)	439, 1162
SexAI	ACCWGGT	1 cut(s)	282
SfaNI	GCATC	2 cut(s)	225, 826
SfuI	TTCGAA	1 cut(s)	749
SinI	GGWCC	1 cut(s)	719
SmiMI	CAYNNNNRTG	2 cut(s)	102, 507
SmlI	CTYRAG	1 cut(s)	1190
SmoI	CTYRAG	1 cut(s)	1190
SphI	GCATGC	1 cut(s)	370
Sse9I	AATT	6 cut(s)	157, 172, 327, 540, 927, 1153
SseBI	AGGCCT	1 cut(s)	845
SsiI	CCGC	4 cut(s)	27, 102, 603, 1134
SspI	AATATT	1 cut(s)	611
SspMI	CTAG	3 cut(s)	551, 1233, 1237
SstI	GAGCTC	1 cut(s)	439
StuI	AGGCCT	1 cut(s)	845
StyD4I	CCNGG	2 cut(s)	282, 1021
StyI	CCWWGG	2 cut(s)	97, 840
TaaI	ACNGT	6 cut(s)	224, 454, 755, 914, 1108, 1204
TaiI	ACGT	5 cut(s)	205, 211, 461, 559, 890
TaqI	TCGA	5 cut(s)	387, 447, 700, 749, 949
TaqII	GACCGA	1 cut(s)	718
TasI	AATT	6 cut(s)	157, 172, 327, 540, 927, 1153
TatI	WGTACW	2 cut(s)	264, 1226
TfiI	GAWTC	1 cut(s)	245
Tru1I	TTAA	7 cut(s)	167, 828, 849, 884, 942, 1005, 1047
Tru9I	TTAA	7 cut(s)	167, 828, 849, 884, 942, 1005, 1047
TscAI	CASTG	2 cut(s)	457, 529
TseFI	GTSAC	3 cut(s)	131, 730, 1033
TseI	GCWGC	1 cut(s)	1131
Tsp45I	GTSAC	3 cut(s)	131, 730, 1033
TspDTI	ATGAA	4 cut(s)	258, 310, 411, 702
TspRI	CASTG	2 cut(s)	457, 529
VpaK11BI	GGWCC	1 cut(s)	719
XceI	RCATGY	1 cut(s)	370
XmiI	GTMKAC	1 cut(s)	700
XmnI	GAANNNNTTC	1 cut(s)	611
XspI	CTAG	3 cut(s)	551, 1233, 1237
Zsp2I	ATGCAT	1 cut(s)	368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.