Rh3AG030500

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
2021705 .. 2023519
1815 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG030500.1

Sequence Viewer

Length: 1515 bp
ATGGCAGTTAAAAACCCTAATAGTAGCCTTCGTCGTTTAGACAAGTATTATTATAGGGTAGTGGTCATCATCATTCTTGTGCTTCATCCGGTGTGTTATTCTGTTGCAGCAGCAAATATTAACAATAATCATCATTCTGGTTTCAGTACCCACCTTATTCGAAAAAAGTCCCTAAATTCACCCTTCCACAATCATAGAAAGAATAAAGTTTTTCGACGTTTGATGGGTCCAAACACACCACAATCACCGCTTACAATGGACGAGGATGATGGTGAACATCTTATGAAGTTCTCAATAGGAACTCCGGCCGTCGATATTTATGCAGTTGCTGATTCAGGTAGCACTTTACTATGGACCCAATGCAAGCCGTGTGATGGTTGCTACAAGATGAAGCGTGCCATGTTCGACCCGAAAAAGTCATCAACTTATAGGAAGGTTCCTTGTTCCACAAAGGAATGTAGTTTTCTTGAAGACAATGGATTTTGCTCCTTACCCAAAATGGTTTGCACTTACTACTACGCTTATGTAGATGACTCAATCTCTAAAGGGGTATTGGCTAAAGAAACAATTATCTTGACGTCCACGTCAGGTAAGCCTGTGTCCCTGAAAAATATCGTGATGGGTTGTGGGCATAACAACAGTGGTTCTTTAACTGAAAATCAAATGGGAGTGATTGGGCTTGGACGTGGACCATTGTCATTTATATCTCAAATTGGTCCTCTGGTTGGAGGCAAAAAATTCTCACATTGCTTGGTGCCAACTGATACTGATCCAAAAACTGCAAGCAAGATCAGTTTTGGAAATGGGAGTGAAGTTTCGGGTGACGGTGTGGTGACAACGTCATTGGTCGATAAAGCACTATTCCAGGATCAATATCTAGTGACGCTAGAAGGAGTTACCGTCGGAAATAAGTTTGTTCCGTTTAGTAATTCACAAGGAAACTTGAAGTTGTTTGAGAAAGGTAACATGATTGTCGACTCAGGAACAACTTTGACATATTTTCCGCAAGATTTTTATGAGCGGGTGGTATCTCAAGTGAAGAAGACAGTTAATCCGAAATTGGATCCGGTCTATATGAATATCGTTTTAGATGATCCGACAGAGGGAACCCAGCTTTGCTTCAAAACCACGAAGAATCTGAAAGGACCTGATGTGACCATGCATTTTGAGGGTGGTGCTAAACTCAAGTTAACGGCAGAACAAGTGTTTTTTGAAGACCCAGTAAACAAGTTGTACTGCTTTGGAATGGTGAACACCTCTCGTTCGGACACCATCGGTGAAGATCAAGTTGGTATTTATGGAAACAATCTTCAGGGAAATATCTTGATCGGTTATGATCTGGATAGAAGGGTGGTCTCCTTCAAGCCAGCTGATTGCATAAAGATGAGTAGTAGTAACATTAGTAGTAGTAATAACATTAGTAGTAGTAGTAATGGTGCTGGTGCCACTCATCCCTCCTCATATTTCTTCACTTACCTTTTGTGTTTGCTTTTTATTAATGTACTCTTGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

504

Amino Acids

55.35

Weight (kDa)

8.74

Isoelectric Point (pI)

39.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 94 - 268 3.4e-49 Xylanase inhibitor N-terminal
Asp PF00026 175 - 454 8.2e-10 Eukaryotic aspartyl protease
TAXi_C PF14541 291 - 455 1.4e-21 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000230)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g02620 FvH4_6g02640 FvH4_6g02690 FvH4_6g03060 FvH4_6g03100 FvH4_6g03360 FvH4_6g03370 FvH4_6g18770 FvH4_6g24220 FvH4_6g49710
malus_domestica MD04G1225600.v1.1 MD04G1227300.v1.1 MD12G1242600.v1.1 MD12G1242700.v1.1 MD12G1242800.v1.1
prunus_persica Prupe.2G103000_v2.0.a1 Prupe.6G344200_v2.0.a1 Prupe.6G344300_v2.0.a1 Prupe.6G344400_v2.0.a1 Prupe.6G346300_v2.0.a1 Prupe.6G346400_v2.0.a1
pyrus_communis pycom12g22170
rosa_chinensis RchiOBHm_Chr3g0450531 RchiOBHm_Chr3g0450541 RchiOBHm_Chr3g0450561 RchiOBHm_Chr3g0450681 RchiOBHm_Chr3g0450691 RchiOBHm_Chr3g0450711 RchiOBHm_Chr3g0451881 RchiOBHm_Chr3g0454771 RchiOBHm_Chr3g0473771 RchiOBHm_Chr3g0473781 RchiOBHm_Chr3g0477881 RchiOBHm_Chr6g0253861
rosa_laevigata RLG00000014956 RLG00000023682 RLG00000023683 RLG00000023985 RLG00000025416 RLG00000025641 RLG00000025642 RLG00000025708 RLG00000025710 RLG00000025711 RLG00000025720 RLG00000025722 RLG00000025723 RLG00000025733 RLG00000035252
rosa_multiflora Rmu_sc0034928.1_g000007
rosa_roxburghii Rroxscaffold_164G00436250 Rroxscaffold_1G00021590 Rroxscaffold_1G00029330 Rroxscaffold_1G00029340 Rroxscaffold_6G00403630 Rroxscaffold_6G00407810 Rroxscaffold_6G00424780 Rroxscaffold_6G00428220 Rroxscaffold_6G00428250 Rroxscaffold_6G00428270 Rroxscaffold_6G00428340 Rroxscaffold_6G00428350 Rroxscaffold_6G00428380 Rroxscaffold_7G00211410
rosa_rugosa Rorug01G0107600 Rorug01G0107600 Rorug02G0450900 Rorug02G0627600 Rorug02G0628400 Rorug02G0628500 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628700 Rorug02G0629600 Rorug02G0629700 Rorug02G0629800 Rorug02G0636700 Rorug03G0002400 Rorug03G0135400 Rorug03G0135500 Rorug03G0163700 Rorug05G0548500
rosa_samantha Rh2DG537800 Rh3AG029200 Rh3AG029300 Rh3AG029500 Rh3AG030500 Rh3AG030700 Rh3AG038600 Rh3AG062400 Rh3AG214300 Rh3BG029600 Rh3BG029700 Rh3BG029900 Rh3BG030800 Rh3BG031000 Rh3BG031200 Rh3BG039900 Rh3BG064300 Rh3BG214100 Rh3BG214300 Rh3BG247800 Rh3CG028500 Rh3CG028600 Rh3CG028800 Rh3CG029600 Rh3CG029800 Rh3CG030000 Rh3CG038400 Rh3CG063200 Rh3CG210800 Rh3CG211000 Rh3CG241900 Rh3DG029300 Rh3DG029400 Rh3DG029600 Rh3DG030400 Rh3DG030600 Rh3DG030900 Rh3DG039200 Rh3DG064000 Rh3DG210000 Rh3DG210200 Rh3DG241200 Rh6AG064000 Rh6BG000600 Rh6BG057900 Rh6CG008800 Rh6CG057800 Rh6DG009600 Rh6DG054800
rosa_wichuraiana Rw2G042600 Rw3G002250 Rw3G002270 Rw3G002340 Rw3G002350 Rw3G002370 Rw3G002890 Rw3G004860 Rw3G016980 Rw3G016990 Rw6G005680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 583
AatII GACGTC 1 cut(s) 581
AccB1I GGYRCC 2 cut(s) 754, 1442
AccBSI CCGCTC 1 cut(s) 1021
AccI GTMKAC 1 cut(s) 975
AciI CCGC 3 cut(s) 248, 1004, 1021
AclWI GGATC 5 cut(s) 764, 876, 1058, 1071, 1088
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 2 cut(s) 175, 737
AcuI CTGAAG 1 cut(s) 1295
AcyI GRCGYC 1 cut(s) 578
AfaI GTAC 3 cut(s) 148, 1235, 1503
AfiI CCNNNNNNNGG 3 cut(s) 374, 725, 1103
AgsI TTSAA 5 cut(s) 470, 946, 1123, 1214, 1363
AjiI CACGTC 2 cut(s) 585, 686
AjnI CCWGG 1 cut(s) 864
AjuI GAANNNNNNNTTGG 2 cut(s) 1272, 1304
AluBI AGCT 2 cut(s) 1114, 1370
AluI AGCT 2 cut(s) 1114, 1370
Alw26I GTCTC 1 cut(s) 1360
AlwI GGATC 5 cut(s) 764, 876, 1058, 1071, 1088
AlwNI CAGNNNCTG 1 cut(s) 329
AoxI GGCC 1 cut(s) 306
ApeKI GCWGC 2 cut(s) 107, 110
ApoI RAATTY 2 cut(s) 175, 737
AseI ATTAAT 1 cut(s) 1497
AspS9I GGNCC 5 cut(s) 227, 354, 689, 716, 1145
AsuHPI GGTGA 7 cut(s) 171, 237, 284, 833, 844, 1261, 1289
AsuII TTCGAA 1 cut(s) 160
AvaII GGWCC 5 cut(s) 227, 354, 689, 716, 1145
BamHI GGATCC 1 cut(s) 1063
BanI GGYRCC 2 cut(s) 754, 1442
BbsI GAAGAC 3 cut(s) 477, 1049, 1221
BbvI GCAGC 2 cut(s) 119, 122
BccI CCATC 5 cut(s) 217, 263, 368, 613, 1280
BceAI ACGGC 3 cut(s) 293, 352, 1209
BcgI CGANNNNNNTGC 2 cut(s) 302, 336
BciT130I CCWGG 1 cut(s) 866
BcoDI GTCTC 1 cut(s) 1360
BfaI CTAG 3 cut(s) 878, 887, 1513
BisI GCNGC 2 cut(s) 108, 111
BlsI GCNGC 2 cut(s) 109, 112
Bme1390I CCNGG 1 cut(s) 866
Bme18I GGWCC 5 cut(s) 227, 354, 689, 716, 1145
BmgBI CACGTC 2 cut(s) 585, 686
BmgT120I GGNCC 5 cut(s) 227, 354, 689, 716, 1145
BmiI GGNNCC 7 cut(s) 228, 356, 438, 756, 1065, 1108, 1444
BmrFI CCNGG 1 cut(s) 866
BmrI ACTGGG 1 cut(s) 1214
BmuI ACTGGG 1 cut(s) 1214
BoxI GACNNNNGTC 1 cut(s) 694
BpiI GAAGAC 3 cut(s) 477, 1049, 1221
Bpu14I TTCGAA 1 cut(s) 160
BpuEI CTTGAG 2 cut(s) 1017, 1169
BsaBI GATNNNNATC 2 cut(s) 768, 873
BsaHI GRCGYC 1 cut(s) 578
BsaI GGTCTC 1 cut(s) 1360
BsaWI WCCGGW 2 cut(s) 88, 1066
BsaXI ACNNNNNCTCC 2 cut(s) 885, 915
Bsc4I CCNNNNNNNGG 3 cut(s) 374, 725, 1103
Bse1I ACTGG 1 cut(s) 1220
Bse3DI GCAATG 1 cut(s) 745
Bse8I GATNNNNATC 2 cut(s) 768, 873
BseBI CCWGG 1 cut(s) 866
BseGI GGATG 3 cut(s) 85, 271, 1450
BseJI GATNNNNATC 2 cut(s) 768, 873
BseLI CCNNNNNNNGG 3 cut(s) 374, 725, 1103
BseMI GCAATG 1 cut(s) 745
BseMII CTCAG 1 cut(s) 993
BseNI ACTGG 1 cut(s) 1220
BseRI GAGGAG 1 cut(s) 1447
BseX3I CGGCCG 1 cut(s) 306
BseXI GCAGC 2 cut(s) 119, 122
BseYI CCCAGC 1 cut(s) 1110
Bsh1285I CGRYCG 1 cut(s) 309
BshFI GGCC 1 cut(s) 308
BshNI GGYRCC 2 cut(s) 754, 1442
BsiEI CGRYCG 1 cut(s) 309
BsiSI CCGG 3 cut(s) 89, 305, 1067
BslFI GGGAC 2 cut(s) 154, 586
BslI CCNNNNNNNGG 3 cut(s) 374, 725, 1103
BsmAI GTCTC 1 cut(s) 1360
BsmFI GGGAC 2 cut(s) 154, 586
BsnI GGCC 1 cut(s) 308
Bso31I GGTCTC 1 cut(s) 1360
Bsp119I TTCGAA 1 cut(s) 160
Bsp143I GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
BspACI CCGC 3 cut(s) 248, 1004, 1021
BspANI GGCC 1 cut(s) 308
BspCNI CTCAG 1 cut(s) 992
BspLI GGNNCC 7 cut(s) 228, 356, 438, 756, 1065, 1108, 1444
BspPI GGATC 5 cut(s) 764, 876, 1058, 1071, 1088
BspT104I TTCGAA 1 cut(s) 160
BspT107I GGYRCC 2 cut(s) 754, 1442
BspTNI GGTCTC 1 cut(s) 1360
BsrBI CCGCTC 1 cut(s) 1021
BsrDI GCAATG 1 cut(s) 745
BsrI ACTGG 1 cut(s) 1220
BssMI GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
BssNI GRCGYC 1 cut(s) 578
Bst2UI CCWGG 1 cut(s) 866
Bst4CI ACNGT 4 cut(s) 641, 827, 901, 1048
BstACI GRCGYC 1 cut(s) 578
BstBI TTCGAA 1 cut(s) 160
BstC8I GCNNGC 4 cut(s) 365, 396, 784, 1368
BstDEI CTNAG 1 cut(s) 979
BstF5I GGATG 3 cut(s) 85, 271, 1450
BstKTI GATC 8 cut(s) 772, 792, 871, 1066, 1096, 1285, 1329, 1339
BstMAI GTCTC 1 cut(s) 1360
BstMBI GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
BstMCI CGRYCG 1 cut(s) 309
BstNI CCWGG 1 cut(s) 866
BstPAI GACNNNNGTC 1 cut(s) 694
BstSCI CCNGG 1 cut(s) 864
BstV1I GCAGC 2 cut(s) 119, 122
BstV2I GAAGAC 3 cut(s) 477, 1049, 1221
BstX2I RGATCY 1 cut(s) 1063
BstYI RGATCY 1 cut(s) 1063
BstZI CGGCCG 1 cut(s) 306
BsuRI GGCC 1 cut(s) 308
BtrI CACGTC 2 cut(s) 585, 686
BtsCI GGATG 3 cut(s) 85, 271, 1450
BtsIMutI CAGTG 1 cut(s) 646
Cac8I GCNNGC 4 cut(s) 365, 396, 784, 1368
CaiI CAGNNNCTG 1 cut(s) 329
Cfr13I GGNCC 5 cut(s) 227, 354, 689, 716, 1145
CseI GACGC 1 cut(s) 892
Csp6I GTAC 3 cut(s) 147, 1234, 1502
CviAII CATG 3 cut(s) 400, 967, 1159
CviJI RGCY 9 cut(s) 27, 308, 367, 557, 595, 679, 1114, 1366, 1370
CviKI_1 RGCY 9 cut(s) 27, 308, 367, 557, 595, 679, 1114, 1366, 1370
CviQI GTAC 3 cut(s) 147, 1234, 1502
DdeI CTNAG 1 cut(s) 979
DpnI GATC 8 cut(s) 771, 791, 870, 1065, 1095, 1284, 1328, 1338
DpnII GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
DrdI GACNNNNNNGTC 1 cut(s) 583
DseDI GACNNNNNNGTC 1 cut(s) 583
EaeI YGGCCR 1 cut(s) 306
EagI CGGCCG 1 cut(s) 306
EclXI CGGCCG 1 cut(s) 306
Eco31I GGTCTC 1 cut(s) 1360
Eco47I GGWCC 5 cut(s) 227, 354, 689, 716, 1145
Eco52I CGGCCG 1 cut(s) 306
Eco57I CTGAAG 1 cut(s) 1295
EcoO109I RGGNCCY 1 cut(s) 1145
EcoRII CCWGG 1 cut(s) 864
EcoT22I ATGCAT 1 cut(s) 1164
FaeI CATG 3 cut(s) 403, 970, 1162
FaqI GGGAC 2 cut(s) 154, 586
FatI CATG 3 cut(s) 399, 966, 1158
FauI CCCGC 1 cut(s) 1014
FblI GTMKAC 1 cut(s) 975
Fnu4HI GCNGC 2 cut(s) 108, 111
FokI GGATG 3 cut(s) 72, 278, 1437
Fsp4HI GCNGC 2 cut(s) 108, 111
FspBI CTAG 3 cut(s) 878, 887, 1513
GluI GCNGC 2 cut(s) 108, 111
GsaI CCCAGC 1 cut(s) 1114
HaeIII GGCC 1 cut(s) 308
HapII CCGG 3 cut(s) 89, 305, 1067
HgaI GACGC 1 cut(s) 892
Hin1I GRCGYC 1 cut(s) 578
Hin1II CATG 3 cut(s) 403, 970, 1162
HincII GTYRAC 2 cut(s) 976, 1191
HindII GTYRAC 2 cut(s) 976, 1191
HinfI GANTC 4 cut(s) 332, 533, 977, 1135
HpaI GTTAAC 1 cut(s) 1191
HpaII CCGG 3 cut(s) 89, 305, 1067
HphI GGTGA 7 cut(s) 171, 237, 284, 833, 844, 1261, 1289
Hpy166II GTNNAC 7 cut(s) 275, 582, 689, 976, 1191, 1225, 1252
Hpy188I TCNGA 5 cut(s) 905, 1056, 1098, 1140, 1267
Hpy188III TCNNGA 6 cut(s) 467, 574, 616, 981, 1324, 1340
Hpy8I GTNNAC 7 cut(s) 275, 582, 689, 976, 1191, 1225, 1252
Hpy99I CGWCG 4 cut(s) 36, 219, 314, 905
HpyAV CCTTC 6 cut(s) 38, 193, 427, 884, 1341, 1369
HpyCH4III ACNGT 4 cut(s) 641, 827, 901, 1048
HpyCH4IV ACGT 5 cut(s) 217, 578, 584, 685, 839
HpyCH4V TGCA 7 cut(s) 107, 323, 363, 507, 782, 1162, 1377
HpyF3I CTNAG 1 cut(s) 979
HpySE526I ACGT 5 cut(s) 217, 578, 584, 685, 839
Hsp92I GRCGYC 1 cut(s) 578
Hsp92II CATG 3 cut(s) 403, 970, 1162
KspAI GTTAAC 1 cut(s) 1191
Kzo9I GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
LmnI GCTCC 1 cut(s) 491
Lsp1109I GCAGC 2 cut(s) 119, 122
MaeI CTAG 3 cut(s) 878, 887, 1513
MaeII ACGT 5 cut(s) 217, 578, 584, 685, 839
MaeIII GTNAC 7 cut(s) 821, 832, 880, 895, 962, 1153, 1394
MalI GATC 8 cut(s) 771, 791, 870, 1065, 1095, 1284, 1328, 1338
MbiI CCGCTC 1 cut(s) 1021
MboI GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
MboII GAAGA 8 cut(s) 482, 1051, 1054, 1144, 1226, 1292, 1301, 1459
MflI RGATCY 1 cut(s) 1063
MluCI AATT 6 cut(s) 175, 567, 711, 737, 928, 1058
MlyI GAGTC 2 cut(s) 527, 971
MmeI TCCRAC 3 cut(s) 706, 883, 1121
MnlI CCTC 8 cut(s) 256, 722, 729, 1096, 1162, 1267, 1465, 1468
Mph1103I ATGCAT 1 cut(s) 1164
MseI TTAA 6 cut(s) 9, 120, 650, 1050, 1190, 1497
MslI CAYNNNNRTG 2 cut(s) 77, 1382
MspA1I CMGCKG 1 cut(s) 1370
MspI CCGG 3 cut(s) 89, 305, 1067
MspR9I CCNGG 1 cut(s) 866
MvaI CCWGG 1 cut(s) 866
NdeII GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
NlaIII CATG 3 cut(s) 403, 970, 1162
NlaIV GGNNCC 7 cut(s) 228, 356, 438, 756, 1065, 1108, 1444
NmuCI GTSAC 4 cut(s) 821, 832, 880, 1153
NsiI ATGCAT 1 cut(s) 1164
NspV TTCGAA 1 cut(s) 160
PfeI GAWTC 2 cut(s) 332, 1135
PflFI GACNNNGTC 1 cut(s) 838
PfoI TCCNGGA 1 cut(s) 864
PkrI GCNGC 2 cut(s) 109, 112
PleI GAGTC 2 cut(s) 527, 971
PpsI GAGTC 2 cut(s) 527, 971
PpuMI RGGWCCY 1 cut(s) 1145
PshAI GACNNNNGTC 1 cut(s) 694
PshBI ATTAAT 1 cut(s) 1497
Psp5II RGGWCCY 1 cut(s) 1145
Psp6I CCWGG 1 cut(s) 864
PspFI CCCAGC 1 cut(s) 1110
PspGI CCWGG 1 cut(s) 864
PspN4I GGNNCC 7 cut(s) 228, 356, 438, 756, 1065, 1108, 1444
PspPI GGNCC 5 cut(s) 227, 354, 689, 716, 1145
PspPPI RGGWCCY 1 cut(s) 1145
PstNI CAGNNNCTG 1 cut(s) 329
PsuI RGATCY 1 cut(s) 1063
PsyI GACNNNGTC 1 cut(s) 838
PvuII CAGCTG 1 cut(s) 1370
RsaI GTAC 3 cut(s) 148, 1235, 1503
RsaNI GTAC 3 cut(s) 147, 1234, 1502
RseI CAYNNNNRTG 2 cut(s) 77, 1382
SalI GTCGAC 1 cut(s) 974
SaqAI TTAA 6 cut(s) 9, 120, 650, 1050, 1190, 1497
SatI GCNGC 2 cut(s) 108, 111
Sau3AI GATC 8 cut(s) 769, 789, 868, 1063, 1093, 1282, 1326, 1336
Sau96I GGNCC 5 cut(s) 227, 354, 689, 716, 1145
SchI GAGTC 2 cut(s) 527, 971
ScrFI CCNGG 1 cut(s) 866
SfuI TTCGAA 1 cut(s) 160
SinI GGWCC 5 cut(s) 227, 354, 689, 716, 1145
SmiMI CAYNNNNRTG 2 cut(s) 77, 1382
SmlI CTYRAG 2 cut(s) 1032, 1184
SmoI CTYRAG 2 cut(s) 1032, 1184
Sse9I AATT 6 cut(s) 175, 567, 711, 737, 928, 1058
SsiI CCGC 3 cut(s) 248, 1004, 1021
SspI AATATT 1 cut(s) 118
SspMI CTAG 3 cut(s) 878, 887, 1513
StyD4I CCNGG 1 cut(s) 864
TaaI ACNGT 4 cut(s) 641, 827, 901, 1048
TaiI ACGT 5 cut(s) 220, 581, 587, 688, 842
TaqI TCGA 6 cut(s) 160, 214, 312, 405, 849, 975
TasI AATT 6 cut(s) 175, 567, 711, 737, 928, 1058
TatI WGTACW 2 cut(s) 1233, 1501
TfiI GAWTC 2 cut(s) 332, 1135
Tru1I TTAA 6 cut(s) 9, 120, 650, 1050, 1190, 1497
Tru9I TTAA 6 cut(s) 9, 120, 650, 1050, 1190, 1497
TscAI CASTG 1 cut(s) 646
TseFI GTSAC 4 cut(s) 821, 832, 880, 1153
TseI GCWGC 2 cut(s) 107, 110
Tsp45I GTSAC 4 cut(s) 821, 832, 880, 1153
TspDTI ATGAA 4 cut(s) 74, 299, 404, 1091
TspGWI ACGGA 1 cut(s) 909
TspRI CASTG 1 cut(s) 646
Tth111I GACNNNGTC 1 cut(s) 838
VpaK11BI GGWCC 5 cut(s) 227, 354, 689, 716, 1145
VspI ATTAAT 1 cut(s) 1497
XapI RAATTY 2 cut(s) 175, 737
XmiI GTMKAC 1 cut(s) 975
XspI CTAG 3 cut(s) 878, 887, 1513
ZraI GACGTC 1 cut(s) 579
Zsp2I ATGCAT 1 cut(s) 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.