Rh6DG054800

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000230
Physical Location & Seq
Reverse (-)
5733044 .. 5734516
1473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG054800.1

Sequence Viewer

Length: 1473 bp
ATGGCACCTTTAAAGCCTAATAACACCTTTTGTCATTTAGGCAAGTATAATTATAGTATGGTGGTGATCACTATTTTTTCCCTTCATCTTGTATGTTTTTCTTTTACCGCAGCGGCTAATATCAACAATTATAACGGTGAATTCAGTGCTCATCTTATTGGGAAAAACTCTCCAAATTCACCCTTGTACAATCACAAAAACCACAAAAATTTTCGACGTTTGGTGGGTCCCGAAATGCTACAATCAACAGTAGCAACCAATCCAGATGGTGGCGGTCATCTTATGAAATTGTCAATAGGAACCCCGCCGTTCGATATATATGTAATTGTTGATACAGGCAGCACTCTACTATGGATCCAATGCCAACCATGTAAAAGTTGCTTCAAGACAAAACATGCCATATTCGACCCGGAAAAATCCCCAACTTATGGGAACATTACTTGTTCTGAAAGCGAGTGTAGACTTGTCGACGAGGACTCACCTCAAAACTATTGCAAAGACAATCCTCAAGCTACTTGCATGTACCATTACCGGTATGTAGATAAGTCGTACAGTACAGGTGAAGTGGCTAAAGAAGCAATTACCTTGAAGTCTACGTCAGGTACTGATGTAATCTTAAAAGATATTGTCATTGGGTGTGGGCAAAACAACAGTGATGAACGAGCAGGTGAGTATCAAATGGGAAGAGTTGGGCTTGGACACGGGCCCTTGTCATTTATTTCTCAAATCAGTCCTTATGTTGGAGGCAAAAGATTCTCGTATTGCTTAGTGCCCCTTGATACTGATCCGAAAATCGAAAGCAATATCAACTTTGGAAATGGGAGTGAAGTTTCGGGTAAAGGGGTGGTGTCAACACCTTTGTTCGATATTGAAAGATCCATGAATAAGTATTATGTGACGGTGCGAGGAATTACAATCGGAAATGAATTTCTTCCTTTTAACTCAACAGAGACATTGCTCGAGGAAGGGAATATGTTGATCGACTCGGGCTCAACTTTATCATATTTACCTCAAGAATTTTATGACCGGGTGGTGAATAAGCTGGTAAAAACACTTGATCCAAAATTGGAGCTAATCAATTATATTGACTCAAAAAATACAACTAGCCTTTGCATCAACGCCGCGACGATTTCAAAAGCACCAAATATGGCTGTGCATTTCGACGGTGGTGGAAAACTACAGTTAACGACAGAACGATATTTATTTAGATTAGAAGAGGAAAAGTTAGTTTGCCTTGGAATCAGGAACACCAATAGGAAGGCTTTCCATAGTAACTATACTGGTGTTTTTGGACGCAATGTTCAGGGAAATATGTTGATTGGTTTTGACATAGATAGAGAAGTGGTCTCCTTCAAGCCCACTAATTGCATAAACATACCTAGCGCTGGTGGTGCTAATATTGCCACTCATCCCTTTTCCATTTTCTCCACTTGTCTATTCTATTTGCTTTTGATTGTGAGTTTGTCCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

490

Amino Acids

54.22

Weight (kDa)

6.85

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 94 - 273 2e-47 Xylanase inhibitor N-terminal
Asp PF00026 95 - 144 5e-08 Eukaryotic aspartyl protease
Asp PF00026 265 - 451 5.3e-06 Eukaryotic aspartyl protease
TAXi_C PF14541 296 - 452 4.6e-20 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000230)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g02620 FvH4_6g02640 FvH4_6g02690 FvH4_6g03060 FvH4_6g03100 FvH4_6g03360 FvH4_6g03370 FvH4_6g18770 FvH4_6g24220 FvH4_6g49710
malus_domestica MD04G1225600.v1.1 MD04G1227300.v1.1 MD12G1242600.v1.1 MD12G1242700.v1.1 MD12G1242800.v1.1
prunus_persica Prupe.2G103000_v2.0.a1 Prupe.6G344200_v2.0.a1 Prupe.6G344300_v2.0.a1 Prupe.6G344400_v2.0.a1 Prupe.6G346300_v2.0.a1 Prupe.6G346400_v2.0.a1
pyrus_communis pycom12g22170
rosa_chinensis RchiOBHm_Chr3g0450531 RchiOBHm_Chr3g0450541 RchiOBHm_Chr3g0450561 RchiOBHm_Chr3g0450681 RchiOBHm_Chr3g0450691 RchiOBHm_Chr3g0450711 RchiOBHm_Chr3g0451881 RchiOBHm_Chr3g0454771 RchiOBHm_Chr3g0473771 RchiOBHm_Chr3g0473781 RchiOBHm_Chr3g0477881 RchiOBHm_Chr6g0253861
rosa_laevigata RLG00000014956 RLG00000023682 RLG00000023683 RLG00000023985 RLG00000025416 RLG00000025641 RLG00000025642 RLG00000025708 RLG00000025710 RLG00000025711 RLG00000025720 RLG00000025722 RLG00000025723 RLG00000025733 RLG00000035252
rosa_multiflora Rmu_sc0034928.1_g000007
rosa_roxburghii Rroxscaffold_164G00436250 Rroxscaffold_1G00021590 Rroxscaffold_1G00029330 Rroxscaffold_1G00029340 Rroxscaffold_6G00403630 Rroxscaffold_6G00407810 Rroxscaffold_6G00424780 Rroxscaffold_6G00428220 Rroxscaffold_6G00428250 Rroxscaffold_6G00428270 Rroxscaffold_6G00428340 Rroxscaffold_6G00428350 Rroxscaffold_6G00428380 Rroxscaffold_7G00211410
rosa_rugosa Rorug01G0107600 Rorug01G0107600 Rorug02G0450900 Rorug02G0627600 Rorug02G0628400 Rorug02G0628500 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628600 Rorug02G0628700 Rorug02G0629600 Rorug02G0629700 Rorug02G0629800 Rorug02G0636700 Rorug03G0002400 Rorug03G0135400 Rorug03G0135500 Rorug03G0163700 Rorug05G0548500
rosa_samantha Rh2DG537800 Rh3AG029200 Rh3AG029300 Rh3AG029500 Rh3AG030500 Rh3AG030700 Rh3AG038600 Rh3AG062400 Rh3AG214300 Rh3BG029600 Rh3BG029700 Rh3BG029900 Rh3BG030800 Rh3BG031000 Rh3BG031200 Rh3BG039900 Rh3BG064300 Rh3BG214100 Rh3BG214300 Rh3BG247800 Rh3CG028500 Rh3CG028600 Rh3CG028800 Rh3CG029600 Rh3CG029800 Rh3CG030000 Rh3CG038400 Rh3CG063200 Rh3CG210800 Rh3CG211000 Rh3CG241900 Rh3DG029300 Rh3DG029400 Rh3DG029600 Rh3DG030400 Rh3DG030600 Rh3DG030900 Rh3DG039200 Rh3DG064000 Rh3DG210000 Rh3DG210200 Rh3DG241200 Rh6AG064000 Rh6BG000600 Rh6BG057900 Rh6CG008800 Rh6CG057800 Rh6DG009600 Rh6DG054800
rosa_wichuraiana Rw2G042600 Rw3G002250 Rw3G002270 Rw3G002340 Rw3G002350 Rw3G002370 Rw3G002890 Rw3G004860 Rw3G016980 Rw3G016990 Rw6G005680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 132
AarI CACCTGC 1 cut(s) 656
Acc36I ACCTGC 1 cut(s) 656
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 2 cut(s) 269, 428
AccI GTMKAC 3 cut(s) 460, 468, 593
AccII CGCG 1 cut(s) 1124
AciI CCGC 5 cut(s) 108, 113, 273, 305, 1122
AclWI GGATC 5 cut(s) 349, 362, 779, 870, 1052
AcsI RAATTY 5 cut(s) 140, 175, 208, 926, 1016
AfaI GTAC 5 cut(s) 188, 524, 551, 556, 604
AfeI AGCGCT 1 cut(s) 1384
AfiI CCNNNNNNNGG 4 cut(s) 269, 428, 740, 1385
AgeI ACCGGT 1 cut(s) 531
AgsI TTSAA 5 cut(s) 385, 589, 872, 1134, 1354
AloI GAACNNNNNNTCC 2 cut(s) 1284, 1316
AluBI AGCT 3 cut(s) 512, 1042, 1072
AluI AGCT 3 cut(s) 512, 1042, 1072
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 2 cut(s) 944, 1351
AlwI GGATC 5 cut(s) 349, 362, 779, 870, 1052
AlwNI CAGNNNCTG 1 cut(s) 605
Ama87I CYCGRG 2 cut(s) 959, 985
Aor51HI AGCGCT 1 cut(s) 1384
AoxI GGCC 1 cut(s) 704
ApaI GGGCCC 1 cut(s) 708
ApeKI GCWGC 2 cut(s) 110, 339
ApoI RAATTY 5 cut(s) 140, 175, 208, 926, 1016
AsiGI ACCGGT 1 cut(s) 531
Asp700I GAANNNNTTC 2 cut(s) 930, 1262
AspLEI GCGC 1 cut(s) 1385
AspS9I GGNCC 3 cut(s) 227, 704, 705
AsuC2I CCSGG 2 cut(s) 410, 1028
AsuHPI GGTGA 7 cut(s) 76, 149, 171, 471, 572, 680, 1045
AvaI CYCGRG 2 cut(s) 959, 985
AvaII GGWCC 1 cut(s) 227
BaeGI GKGCMC 2 cut(s) 708, 774
BaeI ACNNNNGTAYC 2 cut(s) 594, 627
BamHI GGATCC 1 cut(s) 354
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 708, 992
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 2 cut(s) 122, 351
BccI CCATC 1 cut(s) 260
BceAI ACGGC 1 cut(s) 292
BclI TGATCA 1 cut(s) 66
BcnI CCSGG 2 cut(s) 410, 1028
BcoDI GTCTC 2 cut(s) 944, 1351
BfaI CTAG 3 cut(s) 1104, 1380, 1471
BfmI CTRYAG 1 cut(s) 1178
BfoI RGCGCY 1 cut(s) 1386
BfuAI ACCTGC 1 cut(s) 656
BisI GCNGC 4 cut(s) 111, 114, 340, 1122
BlsI GCNGC 4 cut(s) 112, 115, 341, 1123
Bme1390I CCNGG 2 cut(s) 410, 1028
Bme18I GGWCC 1 cut(s) 227
BmeT110I CYCGRG 2 cut(s) 959, 985
BmgT120I GGNCC 3 cut(s) 227, 704, 705
BmiI GGNNCC 6 cut(s) 6, 228, 229, 301, 356, 706
BmrFI CCNGG 2 cut(s) 410, 1028
BmsI GCATC 1 cut(s) 1122
BpuEI CTTGAG 2 cut(s) 492, 996
BpuMI CCSGG 2 cut(s) 410, 1028
BsaBI GATNNNNATC 1 cut(s) 783
BsaI GGTCTC 1 cut(s) 1351
BsaJI CCNNGG 1 cut(s) 1234
BsaWI WCCGGW 1 cut(s) 531
Bsc4I CCNNNNNNNGG 4 cut(s) 269, 428, 740, 1385
Bse118I RCCGGY 1 cut(s) 531
Bse1I ACTGG 1 cut(s) 1285
Bse3DI GCAATG 2 cut(s) 953, 1303
Bse8I GATNNNNATC 1 cut(s) 783
BseDI CCNNGG 1 cut(s) 1234
BseGI GGATG 1 cut(s) 1408
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 4 cut(s) 269, 428, 740, 1385
BseMI GCAATG 2 cut(s) 953, 1303
BseNI ACTGG 1 cut(s) 1285
BseSI GKGCMC 2 cut(s) 708, 774
BseXI GCAGC 2 cut(s) 122, 351
Bsh1236I CGCG 1 cut(s) 1124
BshFI GGCC 1 cut(s) 706
BshNI GGYRCC 1 cut(s) 4
BshTI ACCGGT 1 cut(s) 531
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 2 cut(s) 959, 985
BsiSI CCGG 3 cut(s) 410, 532, 1027
BslFI GGGAC 1 cut(s) 213
BslI CCNNNNNNNGG 4 cut(s) 269, 428, 740, 1385
BsmAI GTCTC 2 cut(s) 944, 1351
BsmFI GGGAC 1 cut(s) 213
BsnI GGCC 1 cut(s) 706
Bso31I GGTCTC 1 cut(s) 1351
BsoBI CYCGRG 2 cut(s) 959, 985
Bsp120I GGGCCC 1 cut(s) 704
Bsp1286I GDGCHC 4 cut(s) 151, 708, 774, 992
Bsp1407I TGTACA 1 cut(s) 186
Bsp143I GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
BspACI CCGC 5 cut(s) 108, 113, 273, 305, 1122
BspANI GGCC 1 cut(s) 706
BspFNI CGCG 1 cut(s) 1124
BspLI GGNNCC 6 cut(s) 6, 228, 229, 301, 356, 706
BspMI ACCTGC 1 cut(s) 656
BspPI GGATC 5 cut(s) 349, 362, 779, 870, 1052
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 1351
BsrDI GCAATG 2 cut(s) 953, 1303
BsrFI RCCGGY 1 cut(s) 531
BsrGI TGTACA 1 cut(s) 186
BsrI ACTGG 1 cut(s) 1285
BssAI RCCGGY 1 cut(s) 531
BssECI CCNNGG 1 cut(s) 1234
BssMI GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
BssT1I CCWWGG 1 cut(s) 1234
Bst4CI ACNGT 7 cut(s) 137, 250, 554, 653, 901, 1166, 1182
Bst6I CTCTTC 2 cut(s) 679, 1209
BstAUI TGTACA 1 cut(s) 186
BstDEI CTNAG 1 cut(s) 766
BstF5I GGATG 1 cut(s) 1408
BstFNI CGCG 1 cut(s) 1124
BstH2I RGCGCY 1 cut(s) 1386
BstHHI GCGC 1 cut(s) 1385
BstKTI GATC 6 cut(s) 69, 357, 787, 878, 981, 1060
BstMAI GTCTC 2 cut(s) 944, 1351
BstMBI GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
BstMWI GCNNNNNNNGC 3 cut(s) 575, 1391, 1400
BstNSI RCATGY 2 cut(s) 398, 523
BstSCI CCNGG 2 cut(s) 408, 1026
BstSFI CTRYAG 1 cut(s) 1178
BstSLI GKGCMC 2 cut(s) 708, 774
BstUI CGCG 1 cut(s) 1124
BstV1I GCAGC 2 cut(s) 122, 351
BstX2I RGATCY 2 cut(s) 354, 875
BstYI RGATCY 2 cut(s) 354, 875
BsuRI GGCC 1 cut(s) 706
BtsCI GGATG 1 cut(s) 1408
BtsIMutI CAGTG 2 cut(s) 151, 658
BveI ACCTGC 1 cut(s) 656
CaiI CAGNNNCTG 1 cut(s) 605
CfoI GCGC 1 cut(s) 1385
Cfr10I RCCGGY 1 cut(s) 531
Cfr13I GGNCC 3 cut(s) 227, 704, 705
CseI GACGC 1 cut(s) 1302
Csp6I GTAC 5 cut(s) 187, 523, 550, 555, 603
CspAI ACCGGT 1 cut(s) 531
CviAII CATG 4 cut(s) 369, 395, 520, 880
CviQI GTAC 5 cut(s) 187, 523, 550, 555, 603
DdeI CTNAG 1 cut(s) 766
DpnI GATC 6 cut(s) 68, 356, 786, 877, 980, 1059
DpnII GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
DraI TTTAAA 1 cut(s) 12
Eam1104I CTCTTC 2 cut(s) 679, 1209
EarI CTCTTC 2 cut(s) 679, 1209
Eco130I CCWWGG 1 cut(s) 1234
Eco24I GRGCYC 2 cut(s) 708, 992
Eco31I GGTCTC 1 cut(s) 1351
Eco47I GGWCC 1 cut(s) 227
Eco47III AGCGCT 1 cut(s) 1384
Eco88I CYCGRG 2 cut(s) 959, 985
EcoO109I RGGNCCY 2 cut(s) 227, 705
EcoRI GAATTC 1 cut(s) 140
EcoT14I CCWWGG 1 cut(s) 1234
EcoT38I GRGCYC 2 cut(s) 708, 992
ErhI CCWWGG 1 cut(s) 1234
FaeI CATG 4 cut(s) 372, 398, 523, 883
FaqI GGGAC 1 cut(s) 213
FatI CATG 4 cut(s) 368, 394, 519, 879
FauI CCCGC 1 cut(s) 312
FbaI TGATCA 1 cut(s) 66
FblI GTMKAC 3 cut(s) 460, 468, 593
Fnu4HI GCNGC 4 cut(s) 111, 114, 340, 1122
FokI GGATG 1 cut(s) 1395
FriOI GRGCYC 2 cut(s) 708, 992
Fsp4HI GCNGC 4 cut(s) 111, 114, 340, 1122
FspBI CTAG 3 cut(s) 1104, 1380, 1471
GlaI GCGC 1 cut(s) 1384
GluI GCNGC 4 cut(s) 111, 114, 340, 1122
HaeII RGCGCY 1 cut(s) 1386
HaeIII GGCC 1 cut(s) 706
HapII CCGG 3 cut(s) 410, 532, 1027
HgaI GACGC 1 cut(s) 1302
HhaI GCGC 1 cut(s) 1385
Hin1II CATG 4 cut(s) 372, 398, 523, 883
Hin6I GCGC 1 cut(s) 1383
HinP1I GCGC 1 cut(s) 1383
HincII GTYRAC 3 cut(s) 469, 852, 1185
HindII GTYRAC 3 cut(s) 469, 852, 1185
HinfI GANTC 5 cut(s) 476, 753, 983, 1088, 1239
HpaI GTTAAC 1 cut(s) 1185
HpaII CCGG 3 cut(s) 410, 532, 1027
HphI GGTGA 7 cut(s) 76, 149, 171, 471, 572, 680, 1045
Hpy166II GTNNAC 5 cut(s) 461, 469, 594, 852, 1185
Hpy188I TCNGA 3 cut(s) 448, 789, 920
Hpy188III TCNNGA 5 cut(s) 230, 263, 385, 1013, 1243
Hpy8I GTNNAC 5 cut(s) 461, 469, 594, 852, 1185
Hpy99I CGWCG 4 cut(s) 219, 473, 1129, 1166
HpyAV CCTTC 4 cut(s) 92, 959, 1252, 1360
HpyCH4III ACNGT 7 cut(s) 137, 250, 554, 653, 901, 1166, 1182
HpyCH4IV ACGT 2 cut(s) 217, 596
HpyCH4V TGCA 5 cut(s) 495, 519, 1113, 1156, 1368
HpyF10VI GCNNNNNNNGC 3 cut(s) 575, 1391, 1400
HpyF3I CTNAG 1 cut(s) 766
HpySE526I ACGT 2 cut(s) 217, 596
Hsp92II CATG 4 cut(s) 372, 398, 523, 883
HspAI GCGC 1 cut(s) 1383
KflI GGGWCCC 1 cut(s) 227
Ksp22I TGATCA 1 cut(s) 66
KspAI GTTAAC 1 cut(s) 1185
Kzo9I GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
LmnI GCTCC 1 cut(s) 1069
Lsp1109I GCAGC 2 cut(s) 122, 351
LweI GCATC 1 cut(s) 1122
MaeI CTAG 3 cut(s) 1104, 1380, 1471
MaeII ACGT 2 cut(s) 217, 596
MaeIII GTNAC 2 cut(s) 895, 1271
MalI GATC 6 cut(s) 68, 356, 786, 877, 980, 1059
MboI GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
MboII GAAGA 3 cut(s) 696, 923, 1226
MflI RGATCY 2 cut(s) 354, 875
MhlI GDGCHC 4 cut(s) 151, 708, 774, 992
MlyI GAGTC 3 cut(s) 470, 977, 1082
MmeI TCCRAC 1 cut(s) 721
MnlI CCTC 8 cut(s) 466, 492, 516, 737, 899, 955, 1020, 1210
MroXI GAANNNNTTC 2 cut(s) 930, 1262
MseI TTAA 4 cut(s) 11, 617, 939, 1184
MspA1I CMGCKG 1 cut(s) 113
MspI CCGG 3 cut(s) 410, 532, 1027
MspR9I CCNGG 2 cut(s) 410, 1028
MvnI CGCG 1 cut(s) 1124
MwoI GCNNNNNNNGC 3 cut(s) 575, 1391, 1400
NciI CCSGG 2 cut(s) 410, 1028
NdeII GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
NlaIII CATG 4 cut(s) 372, 398, 523, 883
NlaIV GGNNCC 6 cut(s) 6, 228, 229, 301, 356, 706
NmuCI GTSAC 1 cut(s) 895
NspI RCATGY 2 cut(s) 398, 523
PaeR7I CTCGAG 1 cut(s) 959
PaqCI CACCTGC 1 cut(s) 656
PdmI GAANNNNTTC 2 cut(s) 930, 1262
PfeI GAWTC 2 cut(s) 753, 1239
PflMI CCANNNNNTGG 2 cut(s) 269, 428
PinAI ACCGGT 1 cut(s) 531
PkrI GCNGC 4 cut(s) 112, 115, 341, 1123
PleI GAGTC 3 cut(s) 470, 977, 1082
PpsI GAGTC 3 cut(s) 470, 977, 1082
PpuMI RGGWCCY 1 cut(s) 227
PsiI TTATAA 1 cut(s) 132
Psp5II RGGWCCY 1 cut(s) 227
PspN4I GGNNCC 6 cut(s) 6, 228, 229, 301, 356, 706
PspOMI GGGCCC 1 cut(s) 704
PspPI GGNCC 3 cut(s) 227, 704, 705
PspPPI RGGWCCY 1 cut(s) 227
PspXI VCTCGAGB 1 cut(s) 959
PstNI CAGNNNCTG 1 cut(s) 605
PsuI RGATCY 2 cut(s) 354, 875
RsaI GTAC 5 cut(s) 188, 524, 551, 556, 604
RsaNI GTAC 5 cut(s) 187, 523, 550, 555, 603
SalI GTCGAC 1 cut(s) 467
SaqAI TTAA 4 cut(s) 11, 617, 939, 1184
SatI GCNGC 4 cut(s) 111, 114, 340, 1122
Sau3AI GATC 6 cut(s) 66, 354, 784, 875, 978, 1057
Sau96I GGNCC 3 cut(s) 227, 704, 705
SchI GAGTC 3 cut(s) 470, 977, 1082
ScrFI CCNGG 2 cut(s) 410, 1028
SduI GDGCHC 4 cut(s) 151, 708, 774, 992
SfaNI GCATC 1 cut(s) 1122
SfcI CTRYAG 1 cut(s) 1178
Sfr274I CTCGAG 1 cut(s) 959
SinI GGWCC 1 cut(s) 227
SlaI CTCGAG 1 cut(s) 959
SmlI CTYRAG 3 cut(s) 507, 959, 1011
SmoI CTYRAG 3 cut(s) 507, 959, 1011
SsiI CCGC 5 cut(s) 108, 113, 273, 305, 1122
SspI AATATT 1 cut(s) 1399
SspMI CTAG 3 cut(s) 1104, 1380, 1471
StyD4I CCNGG 2 cut(s) 408, 1026
StyI CCWWGG 1 cut(s) 1234
TaaI ACNGT 7 cut(s) 137, 250, 554, 653, 901, 1166, 1182
TaiI ACGT 2 cut(s) 220, 599
TaqI TCGA 9 cut(s) 214, 312, 405, 468, 795, 864, 960, 981, 1161
TatI WGTACW 2 cut(s) 186, 554
TauI GCSGC 2 cut(s) 116, 1124
TfiI GAWTC 2 cut(s) 753, 1239
Tru1I TTAA 4 cut(s) 11, 617, 939, 1184
Tru9I TTAA 4 cut(s) 11, 617, 939, 1184
TscAI CASTG 2 cut(s) 151, 658
TseFI GTSAC 1 cut(s) 895
TseI GCWGC 2 cut(s) 110, 339
Tsp45I GTSAC 1 cut(s) 895
TspDTI ATGAA 5 cut(s) 74, 299, 672, 896, 939
TspRI CASTG 2 cut(s) 151, 658
Van91I CCANNNNNTGG 2 cut(s) 269, 428
VpaK11BI GGWCC 1 cut(s) 227
XapI RAATTY 5 cut(s) 140, 175, 208, 926, 1016
XceI RCATGY 2 cut(s) 398, 523
XhoI CTCGAG 1 cut(s) 959
XmiI GTMKAC 3 cut(s) 460, 468, 593
XmnI GAANNNNTTC 2 cut(s) 930, 1262
XspI CTAG 3 cut(s) 1104, 1380, 1471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.