Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000466

Physical Location & Seq

Genomic Coordinates Reverse (-)

85132713 .. 85133885

Gene Structure 1173 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036818

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGTCGGACTATCCCCGCCCTCCAGCTGTAGCGCCGTTAAACAAGGAGACGCTTTTGCAGCGGCTCCAGGAGAGCTGGACCTATGCCATCTTCTGGCAGTCGTCATACGACATGTCGGGAGCTTCCCTTCTCCAATGGGGCCAGGGGTTCTACAACGAAGAGTGTGACAAACCCAAAAAGACGACGTCGTTGGTCGTGCAAGAGTACCGGAAGAAAGTGCTCAGGAACCTCACCTCTTTTTTGTTCGGCACCTCCGCCGCCGACGCGCTCCCAGACCAGGAAGTCACTGATCCAGAATGGTTCGTCTTTTTTTCCACGAAGGAGAAATTCCTCAACGGCGGCGGGTTGCCGGGTCAGGCCTTTTTCCATTCCTCTCCGGTCTGGGTCGCCGGGCCGGACCGCCTAGCGGCGTCCTCGTGCGAGCGGGCCAGACGAGGTCGGGTGTTCCGCCTACAGACTATGGTCTGCGTCCCGACGGCGAATGGGGTGGTCGAATTGGGCTCGACGGGGCTGATATTCCAGAGCTCGCATCTGATGAACAAGGTCCGGGTATTGTTTGATTTCAATAATCTTGCAGTCGGTTCTGGGCCTATGACTATGGCCACTTCAGGACCGAGTAGCAGTAACCATCACATTTCTAAACCGATTCAGTTCAACAACCACCCTAGTTCCAGTGGCTCCTCTGCATGTCTTCCTTCTTCATCGTCAGCTCGTCTCTGGAAGTGTGATGTGTTTTTGAGTTTCAGGGGTGCTGACACACGCAAGGGTATCACAATTGAACTGTACGATCGACTGCAGAGGAGGGGAATTAAAACATTCATGGATGATCGAGATCTTGAAGTAGGGGATGCTATTTCTCCTACTCTCATTGCAGCAATTGAAGAATCAAGGTTTGCAATCATTGTTCTCTCGCAAAATTATGCTTCTTCTATTTGGTGTCTGGAGGAACTTACAAAGATCTGTGAGTGCATGAAAGACCACAACAGAGTTCTTCCACTTTTTTTTTTTCACGTGGAGCCCTTTGATGTAAGATATCAGAAGAGGAGTTTCGAAGAAGCATTCTCTATGCATGAAACATCTGAGCGACACAGATCGGAGAAGGTGAAGCAATGGAGATATGCTTTAAACAAAGTGGCCGGTTTCTCTGGGTGGAATACACAGGATTATAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0006970 GO:0006972 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009651 GO:0009718 GO:0009719 GO:0009725 GO:0009753 GO:0009812 GO:0009813 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042440 GO:0042538 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043425 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046148 GO:0046283 GO:0046872 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

391

Amino Acids

44.13

Weight (kDa)

8.54

Isoelectric Point (pI)

61.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	19 - 186	7.5e-43	bHLH-MYC and R2R3-MYB transcription factors N-terminal
TIR	PF01582	243 - 388	2.4e-42	TIR domain
TIR_2	PF13676	244 - 336	1.2e-16	TIR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000466)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g35831 FvH4_3g44041 FvH4_5g15070 FvH4_5g15070 FvH4_7g08891
malus_domestica	MD12G1125500.v1.1
prunus_persica	Prupe.2G112700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0322841 RchiOBHm_Chr1g0323391 RchiOBHm_Chr1g0327991 RchiOBHm_Chr1g0328961 RchiOBHm_Chr5g0080091 RchiOBHm_Chr6g0244841 RchiOBHm_Chr6g0250491
rosa_laevigata	RLG00000024005 RLG00000024011 RLG00000024013 RLG00000024016 RLG00000024020 RLG00000024393 RLG00000030320 RLG00000030327 RLG00000030347 RLG00000030348 RLG00000030353 RLG00000030374 RLG00000034792 RLG00000035452 RLG00000036087 RLG00000036760 RLG00000036762 RLG00000036764 RLG00000036766 RLG00000036814 RLG00000036815 RLG00000036818 RLG00000036827 RLG00000036828 RLG00000036830 RLG00000036831 RLG00000036833 RLG00000036835
rosa_multiflora	Rmu_co8082032.1_g000001 Rmu_co8162460.1_g000001 Rmu_co8167342.1_g000001 Rmu_co8180788.1_g000001 Rmu_co8300873.1_g000001 Rmu_sc0000252.1_g000008 Rmu_sc0000588.1_g000050 Rmu_sc0000595.1_g000020 Rmu_sc0000749.1_g000016 Rmu_sc0000749.1_g000039 Rmu_sc0000908.1_g000020 Rmu_sc0001148.1_g000040 Rmu_sc0001148.1_g000041 Rmu_sc0001226.1_g000014 Rmu_sc0001639.1_g000003 Rmu_sc0002075.1_g000005 Rmu_sc0002132.1_g000044 Rmu_sc0002634.1_g000026 Rmu_sc0003418.1_g000010 Rmu_sc0007793.1_g000030 Rmu_sc0012920.1_g000001 Rmu_sc0016164.1_g000016 Rmu_sc0019190.1_g000006 Rmu_sc0019291.1_g000001 Rmu_sc0021169.1_g000003 Rmu_sc0040474.1_g000001
rosa_roxburghii	Rroxscaffold_1G00003030 Rroxscaffold_1G00003240 Rroxscaffold_1G00003280 Rroxscaffold_1G00003530 Rroxscaffold_1G00003600 Rroxscaffold_1G00003920 Rroxscaffold_3G00235100 Rroxscaffold_3G00240330 Rroxscaffold_4G00326470 Rroxscaffold_4G00326760 Rroxscaffold_4G00327070 Rroxscaffold_6G00393840 Rroxscaffold_6G00408110 Rroxscaffold_6G00408180
rosa_rugosa	Rorug01G0036300 Rorug01G0038900 Rorug02G0108200 Rorug05G0459600 Rorug07G0125600 Rorug07G0204700
rosa_samantha	Rh1DG060500 Rh6BG033900
rosa_wichuraiana	Rw0G008150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1167
AasI	GACNNNNNNGTC	1 cut(s)	281
AatII	GACGTC	1 cut(s)	188
AccB1I	GGYRCC	1 cut(s)	248
AccB7I	CCANNNNNTGG	1 cut(s)	93
AccBSI	CCGCTC	1 cut(s)	424
AccII	CGCG	1 cut(s)	266
AclWI	GGATC	1 cut(s)	284
AcoI	YGGCCR	2 cut(s)	600, 1134
AcsI	RAATTY	1 cut(s)	326
AcuI	CTGAAG	1 cut(s)	591
AcvI	CACGTG	1 cut(s)	1012
AcyI	GRCGYC	2 cut(s)	185, 410
AfaI	GTAC	2 cut(s)	206, 785
AfiI	CCNNNNNNNGG	3 cut(s)	93, 277, 406
AflIII	ACRYGT	1 cut(s)	111
AgsI	TTSAA	5 cut(s)	565, 655, 779, 839, 881
AjnI	CCWGG	3 cut(s)	66, 141, 276
AluBI	AGCT	5 cut(s)	26, 75, 122, 525, 710
AluI	AGCT	5 cut(s)	26, 75, 122, 525, 710
Alw21I	GWGCWC	2 cut(s)	222, 527
Alw26I	GTCTC	2 cut(s)	41, 719
AlwI	GGATC	1 cut(s)	284
AoxI	GGCC	7 cut(s)	139, 357, 392, 426, 587, 600, 1134
ApeKI	GCWGC	2 cut(s)	58, 872
ApoI	RAATTY	1 cut(s)	326
AspLEI	GCGC	2 cut(s)	34, 268
AspS9I	GGNCC	8 cut(s)	78, 139, 392, 397, 426, 544, 587, 611
AsuC2I	CCSGG	3 cut(s)	351, 391, 548
AsuHPI	GGTGA	2 cut(s)	223, 1114
AsuII	TTCGAA	1 cut(s)	1050
AvaII	GGWCC	4 cut(s)	78, 397, 544, 611
BalI	TGGCCA	1 cut(s)	602
BanI	GGYRCC	1 cut(s)	248
BanII	GRGCYC	3 cut(s)	503, 527, 1020
BauI	CACGAG	1 cut(s)	415
BbrPI	CACGTG	1 cut(s)	1012
BbsI	GAAGAC	1 cut(s)	683
Bbv12I	GWGCWC	2 cut(s)	222, 527
BbvI	GCAGC	2 cut(s)	70, 884
BccI	CCATC	2 cut(s)	95, 636
BceAI	ACGGC	3 cut(s)	19, 352, 492
BciT130I	CCWGG	3 cut(s)	68, 143, 278
BcnI	CCSGG	3 cut(s)	351, 391, 548
BcoDI	GTCTC	2 cut(s)	41, 719
BfaI	CTAG	2 cut(s)	404, 666
BfmI	CTRYAG	3 cut(s)	27, 452, 794
BfoI	RGCGCY	1 cut(s)	35
BglII	AGATCT	2 cut(s)	832, 957
BisI	GCNGC	6 cut(s)	59, 62, 258, 340, 408, 873
BlsI	GCNGC	6 cut(s)	60, 63, 259, 341, 409, 874
Bme1390I	CCNGG	6 cut(s)	68, 143, 278, 351, 391, 548
Bme18I	GGWCC	4 cut(s)	78, 397, 544, 611
BmgT120I	GGNCC	8 cut(s)	78, 139, 392, 397, 426, 544, 587, 611
BmiI	GGNNCC	6 cut(s)	65, 140, 227, 250, 679, 1017
BmrFI	CCNGG	6 cut(s)	68, 143, 278, 351, 391, 548
BmsI	GCATC	2 cut(s)	538, 838
BoxI	GACNNNNGTC	1 cut(s)	461
BpiI	GAAGAC	1 cut(s)	683
BpmI	CTGGAG	3 cut(s)	6, 50, 962
Bpu10I	CCTNAGC	1 cut(s)	221
Bpu14I	TTCGAA	1 cut(s)	1050
BpuMI	CCSGG	3 cut(s)	351, 391, 548
BsaAI	YACGTR	1 cut(s)	1012
BsaBI	GATNNNNATC	1 cut(s)	831
BsaHI	GRCGYC	2 cut(s)	185, 410
BsaJI	CCNNGG	1 cut(s)	142
BsaWI	WCCGGW	2 cut(s)	207, 376
Bsc4I	CCNNNNNNNGG	3 cut(s)	93, 277, 406
Bse118I	RCCGGY	1 cut(s)	1136
Bse1I	ACTGG	1 cut(s)	672
Bse3DI	GCAATG	2 cut(s)	867, 1115
Bse8I	GATNNNNATC	1 cut(s)	831
BseBI	CCWGG	3 cut(s)	68, 143, 278
BseDI	CCNNGG	1 cut(s)	142
BseGI	GGATG	2 cut(s)	829, 853
BseJI	GATNNNNATC	1 cut(s)	831
BseLI	CCNNNNNNNGG	3 cut(s)	93, 277, 406
BseMI	GCAATG	2 cut(s)	867, 1115
BseMII	CTCAG	2 cut(s)	235, 1071
BseNI	ACTGG	1 cut(s)	672
BseRI	GAGGAG	3 cut(s)	670, 814, 1057
BseXI	GCAGC	2 cut(s)	70, 884
Bsh1236I	CGCG	1 cut(s)	266
Bsh1285I	CGRYCG	1 cut(s)	790
BshFI	GGCC	7 cut(s)	141, 359, 394, 428, 589, 602, 1136
BshNI	GGYRCC	1 cut(s)	248
BsiEI	CGRYCG	1 cut(s)	790
BsiHKAI	GWGCWC	2 cut(s)	222, 527
BsiSI	CCGG	7 cut(s)	208, 350, 377, 390, 395, 547, 1137
BslFI	GGGAC	1 cut(s)	455
BslI	CCNNNNNNNGG	3 cut(s)	93, 277, 406
BsmAI	GTCTC	2 cut(s)	41, 719
BsmBI	CGTCTC	2 cut(s)	41, 719
BsmFI	GGGAC	1 cut(s)	455
BsmI	GAATGC	1 cut(s)	1058
BsnI	GGCC	7 cut(s)	141, 359, 394, 428, 589, 602, 1136
Bsp119I	TTCGAA	1 cut(s)	1050
Bsp1286I	GDGCHC	4 cut(s)	222, 503, 527, 1020
Bsp143I	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
BspANI	GGCC	7 cut(s)	141, 359, 394, 428, 589, 602, 1136
BspCNI	CTCAG	2 cut(s)	234, 1072
BspFNI	CGCG	1 cut(s)	266
BspLI	GGNNCC	6 cut(s)	65, 140, 227, 250, 679, 1017
BspMAI	CTGCAG	1 cut(s)	798
BspPI	GGATC	1 cut(s)	284
BspT104I	TTCGAA	1 cut(s)	1050
BspT107I	GGYRCC	1 cut(s)	248
BsrBI	CCGCTC	1 cut(s)	424
BsrDI	GCAATG	2 cut(s)	867, 1115
BsrFI	RCCGGY	1 cut(s)	1136
BsrI	ACTGG	1 cut(s)	672
BssAI	RCCGGY	1 cut(s)	1136
BssECI	CCNNGG	1 cut(s)	142
BssMI	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
BssNI	GRCGYC	2 cut(s)	185, 410
BssSI	CACGAG	1 cut(s)	415
Bst2BI	CACGAG	1 cut(s)	415
Bst2UI	CCWGG	3 cut(s)	68, 143, 278
Bst4CI	ACNGT	1 cut(s)	783
Bst6I	CTCTTC	2 cut(s)	153, 1034
BstACI	GRCGYC	2 cut(s)	185, 410
BstBAI	YACGTR	1 cut(s)	1012
BstBI	TTCGAA	1 cut(s)	1050
BstC8I	GCNNGC	3 cut(s)	422, 426, 527
BstDEI	CTNAG	2 cut(s)	221, 1080
BstF5I	GGATG	2 cut(s)	829, 853
BstFNI	CGCG	1 cut(s)	266
BstH2I	RGCGCY	1 cut(s)	35
BstHHI	GCGC	2 cut(s)	34, 268
BstKTI	GATC	6 cut(s)	292, 790, 829, 835, 960, 1094
BstMAI	GTCTC	2 cut(s)	41, 719
BstMBI	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
BstMCI	CGRYCG	1 cut(s)	790
BstMWI	GCNNNNNNNGC	2 cut(s)	58, 263
BstNI	CCWGG	3 cut(s)	68, 143, 278
BstNSI	RCATGY	2 cut(s)	115, 690
BstPAI	GACNNNNGTC	1 cut(s)	461
BstSCI	CCNGG	6 cut(s)	66, 141, 276, 349, 389, 546
BstSFI	CTRYAG	3 cut(s)	27, 452, 794
BstUI	CGCG	1 cut(s)	266
BstV1I	GCAGC	2 cut(s)	70, 884
BstV2I	GAAGAC	1 cut(s)	683
BstX2I	RGATCY	2 cut(s)	832, 957
BstYI	RGATCY	2 cut(s)	832, 957
BsuRI	GGCC	7 cut(s)	141, 359, 394, 428, 589, 602, 1136
BtsCI	GGATG	2 cut(s)	829, 853
BtsIMutI	CAGTG	2 cut(s)	285, 679
Cac8I	GCNNGC	3 cut(s)	422, 426, 527
CfoI	GCGC	2 cut(s)	34, 268
Cfr10I	RCCGGY	1 cut(s)	1136
Cfr13I	GGNCC	8 cut(s)	78, 139, 392, 397, 426, 544, 587, 611
CpoI	CGGWCCG	1 cut(s)	397
CseI	GACGC	4 cut(s)	58, 272, 399, 457
Csp6I	GTAC	2 cut(s)	205, 784
CspI	CGGWCCG	1 cut(s)	397
CviAII	CATG	5 cut(s)	112, 687, 820, 970, 1070
CviQI	GTAC	2 cut(s)	205, 784
DdeI	CTNAG	2 cut(s)	221, 1080
DpnI	GATC	6 cut(s)	291, 789, 828, 834, 959, 1093
DpnII	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
DraI	TTTAAA	1 cut(s)	1125
DrdI	GACNNNNNNGTC	1 cut(s)	281
DseDI	GACNNNNNNGTC	1 cut(s)	281
EaeI	YGGCCR	2 cut(s)	600, 1134
Eam1104I	CTCTTC	2 cut(s)	153, 1034
EarI	CTCTTC	2 cut(s)	153, 1034
EciI	GGCGGA	2 cut(s)	244, 437
Ecl136II	GAGCTC	1 cut(s)	525
Eco147I	AGGCCT	1 cut(s)	359
Eco24I	GRGCYC	3 cut(s)	503, 527, 1020
Eco32I	GATATC	1 cut(s)	1034
Eco47I	GGWCC	4 cut(s)	78, 397, 544, 611
Eco53kI	GAGCTC	1 cut(s)	525
Eco57I	CTGAAG	1 cut(s)	591
Eco72I	CACGTG	1 cut(s)	1012
EcoICRI	GAGCTC	1 cut(s)	525
EcoRII	CCWGG	3 cut(s)	66, 141, 276
EcoRV	GATATC	1 cut(s)	1034
EcoT22I	ATGCAT	1 cut(s)	1071
EcoT38I	GRGCYC	3 cut(s)	503, 527, 1020
Esp3I	CGTCTC	2 cut(s)	41, 719
FaeI	CATG	5 cut(s)	115, 690, 823, 973, 1073
FaqI	GGGAC	1 cut(s)	455
FatI	CATG	5 cut(s)	111, 686, 819, 969, 1069
FauI	CCCGC	3 cut(s)	23, 335, 417
Fnu4HI	GCNGC	6 cut(s)	59, 62, 258, 340, 408, 873
FokI	GGATG	2 cut(s)	836, 860
FriOI	GRGCYC	3 cut(s)	503, 527, 1020
Fsp4HI	GCNGC	6 cut(s)	59, 62, 258, 340, 408, 873
FspBI	CTAG	2 cut(s)	404, 666
GlaI	GCGC	2 cut(s)	33, 267
GluI	GCNGC	6 cut(s)	59, 62, 258, 340, 408, 873
GsuI	CTGGAG	3 cut(s)	6, 50, 962
HaeII	RGCGCY	1 cut(s)	35
HaeIII	GGCC	7 cut(s)	141, 359, 394, 428, 589, 602, 1136
HapII	CCGG	7 cut(s)	208, 350, 377, 390, 395, 547, 1137
HgaI	GACGC	4 cut(s)	58, 272, 399, 457
HhaI	GCGC	2 cut(s)	34, 268
Hin1I	GRCGYC	2 cut(s)	185, 410
Hin1II	CATG	5 cut(s)	115, 690, 823, 973, 1073
Hin6I	GCGC	2 cut(s)	32, 266
HinP1I	GCGC	2 cut(s)	32, 266
HinfI	GANTC	2 cut(s)	646, 884
HpaII	CCGG	7 cut(s)	208, 350, 377, 390, 395, 547, 1137
HphI	GGTGA	2 cut(s)	223, 1114
Hpy188I	TCNGA	5 cut(s)	7, 534, 1038, 1081, 1096
Hpy99I	CGWCG	5 cut(s)	187, 190, 266, 478, 508
HpyAV	CCTTC	4 cut(s)	137, 313, 705, 1093
HpyCH4III	ACNGT	1 cut(s)	783
HpyCH4IV	ACGT	2 cut(s)	185, 1011
HpyCH4V	TGCA	9 cut(s)	58, 199, 575, 686, 796, 872, 896, 969, 1069
HpyF10VI	GCNNNNNNNGC	2 cut(s)	58, 263
HpyF3I	CTNAG	2 cut(s)	221, 1080
HpySE526I	ACGT	2 cut(s)	185, 1011
Hsp92I	GRCGYC	2 cut(s)	185, 410
Hsp92II	CATG	5 cut(s)	115, 690, 823, 973, 1073
HspAI	GCGC	2 cut(s)	32, 266
Kzo9I	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
LmnI	GCTCC	5 cut(s)	69, 119, 273, 683, 1015
Lsp1109I	GCAGC	2 cut(s)	70, 884
LweI	GCATC	2 cut(s)	538, 838
MaeI	CTAG	2 cut(s)	404, 666
MaeII	ACGT	2 cut(s)	185, 1011
MaeIII	GTNAC	3 cut(s)	164, 283, 623
MalI	GATC	6 cut(s)	291, 789, 828, 834, 959, 1093
MbiI	CCGCTC	1 cut(s)	424
MboI	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
MfeI	CAATTG	2 cut(s)	774, 876
MflI	RGATCY	2 cut(s)	832, 957
MhlI	GDGCHC	4 cut(s)	222, 503, 527, 1020
MlsI	TGGCCA	1 cut(s)	602
MluCI	AATT	6 cut(s)	326, 494, 774, 807, 876, 916
MluNI	TGGCCA	1 cut(s)	602
Mox20I	TGGCCA	1 cut(s)	602
Mph1103I	ATGCAT	1 cut(s)	1071
MscI	TGGCCA	1 cut(s)	602
MseI	TTAA	3 cut(s)	38, 810, 1124
Msp20I	TGGCCA	1 cut(s)	602
MspA1I	CMGCKG	2 cut(s)	26, 61
MspI	CCGG	7 cut(s)	208, 350, 377, 390, 395, 547, 1137
MspR9I	CCNGG	6 cut(s)	68, 143, 278, 351, 391, 548
MunI	CAATTG	2 cut(s)	774, 876
Mva1269I	GAATGC	1 cut(s)	1058
MvaI	CCWGG	3 cut(s)	68, 143, 278
MvnI	CGCG	1 cut(s)	266
MwoI	GCNNNNNNNGC	2 cut(s)	58, 263
NciI	CCSGG	3 cut(s)	351, 391, 548
NdeII	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
NlaIII	CATG	5 cut(s)	115, 690, 823, 973, 1073
NlaIV	GGNNCC	6 cut(s)	65, 140, 227, 250, 679, 1017
NmuCI	GTSAC	2 cut(s)	164, 283
NsiI	ATGCAT	1 cut(s)	1071
NspI	RCATGY	2 cut(s)	115, 690
NspV	TTCGAA	1 cut(s)	1050
PceI	AGGCCT	1 cut(s)	359
PciI	ACATGT	1 cut(s)	111
PctI	GAATGC	1 cut(s)	1058
PfeI	GAWTC	2 cut(s)	646, 884
PflFI	GACNNNGTC	2 cut(s)	184, 435
PflMI	CCANNNNNTGG	1 cut(s)	93
PfoI	TCCNGGA	1 cut(s)	66
PkrI	GCNGC	6 cut(s)	60, 63, 259, 341, 409, 874
Ple19I	CGATCG	1 cut(s)	790
PmaCI	CACGTG	1 cut(s)	1012
PmlI	CACGTG	1 cut(s)	1012
Ppu21I	YACGTR	1 cut(s)	1012
PscI	ACATGT	1 cut(s)	111
PshAI	GACNNNNGTC	1 cut(s)	461
PsiI	TTATAA	1 cut(s)	1167
Psp124BI	GAGCTC	1 cut(s)	527
Psp6I	CCWGG	3 cut(s)	66, 141, 276
PspCI	CACGTG	1 cut(s)	1012
PspGI	CCWGG	3 cut(s)	66, 141, 276
PspN4I	GGNNCC	6 cut(s)	65, 140, 227, 250, 679, 1017
PspPI	GGNCC	8 cut(s)	78, 139, 392, 397, 426, 544, 587, 611
PstI	CTGCAG	1 cut(s)	798
PsuI	RGATCY	2 cut(s)	832, 957
PsyI	GACNNNGTC	2 cut(s)	184, 435
PvuI	CGATCG	1 cut(s)	790
PvuII	CAGCTG	1 cut(s)	26
RsaI	GTAC	2 cut(s)	206, 785
RsaNI	GTAC	2 cut(s)	205, 784
Rsr2I	CGGWCCG	1 cut(s)	397
RsrII	CGGWCCG	1 cut(s)	397
SacI	GAGCTC	1 cut(s)	527
SaqAI	TTAA	3 cut(s)	38, 810, 1124
SatI	GCNGC	6 cut(s)	59, 62, 258, 340, 408, 873
Sau3AI	GATC	6 cut(s)	289, 787, 826, 832, 957, 1091
Sau96I	GGNCC	8 cut(s)	78, 139, 392, 397, 426, 544, 587, 611
ScrFI	CCNGG	6 cut(s)	68, 143, 278, 351, 391, 548
SduI	GDGCHC	4 cut(s)	222, 503, 527, 1020
SfaNI	GCATC	2 cut(s)	538, 838
SfcI	CTRYAG	3 cut(s)	27, 452, 794
SfuI	TTCGAA	1 cut(s)	1050
SinI	GGWCC	4 cut(s)	78, 397, 544, 611
Sse9I	AATT	6 cut(s)	326, 494, 774, 807, 876, 916
SseBI	AGGCCT	1 cut(s)	359
SspMI	CTAG	2 cut(s)	404, 666
SstI	GAGCTC	1 cut(s)	527
StuI	AGGCCT	1 cut(s)	359
StyD4I	CCNGG	6 cut(s)	66, 141, 276, 349, 389, 546
TaaI	ACNGT	1 cut(s)	783
TaiI	ACGT	2 cut(s)	188, 1014
TaqI	TCGA	5 cut(s)	492, 503, 790, 829, 1050
TaqII	GACCGA	1 cut(s)	628
TasI	AATT	6 cut(s)	326, 494, 774, 807, 876, 916
TauI	GCSGC	4 cut(s)	64, 260, 342, 410
TfiI	GAWTC	2 cut(s)	646, 884
Tru1I	TTAA	3 cut(s)	38, 810, 1124
Tru9I	TTAA	3 cut(s)	38, 810, 1124
TscAI	CASTG	2 cut(s)	292, 679
TseFI	GTSAC	2 cut(s)	164, 283
TseI	GCWGC	2 cut(s)	58, 872
Tsp45I	GTSAC	2 cut(s)	164, 283
TspDTI	ATGAA	5 cut(s)	551, 690, 808, 986, 1086
TspRI	CASTG	2 cut(s)	292, 679
Tth111I	GACNNNGTC	2 cut(s)	184, 435
Van91I	CCANNNNNTGG	1 cut(s)	93
VpaK11BI	GGWCC	4 cut(s)	78, 397, 544, 611
XapI	RAATTY	1 cut(s)	326
XceI	RCATGY	2 cut(s)	115, 690
XspI	CTAG	2 cut(s)	404, 666
ZraI	GACGTC	1 cut(s)	186
Zsp2I	ATGCAT	1 cut(s)	1071

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.