Rroxscaffold_2G00080150

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000442
Physical Location & Seq
Forward (+)
3042362 .. 3046408
4047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00080150.1

Sequence Viewer

Length: 1323 bp
ATGGCTCTTTTTCGAAGATTGTTTACTTCTAAACCCTACTATCCTTCTACTTCTAGACCCAACTATCCTTCTAGACTCGTCAACCACACATCTGACATTCACTTTACTCTAATGGATTTTATACAAAATCCAACACAGTATGCAGCACAGGACTTGAGAAAGAACTTTGCAATGGATGTCATTGAAAACATCCGTTCAAAAAGGGAGATGGGCATTGTTGGTGGATCCCTAGCTTTAAATCACATTAAAGTGATCGGTTCTAGAGCTACACTTCCACAAGATGATTACAACTCCATGGTGCACAAGAATTATATTGAAGGCTGCAAAGATTTCTTTGACGATTTATTTGGAGGCAGTAGTGAACCATTGGACGACGAGAATTATATAGACATCAAGGCATATGTGAAGGATCTGAAGACAATAGACCAAATGTTAGTGCTGCTTCGCCACCCTTATTTTCAATCAGTGGATGAAGCTCTGAGATTCATTCCATCCACCCTTAAAGAACTTCATGGCTTAAGGGGTAAAACGTTTCCACTTCCAAGAACTGGGGCTAATCTAGCAACCCCCGATCCAGTGCTAGTGCCTGACGAACGTCATGTCGATTGGAAACGTGCATACATGCATCTATGCCGCACAAAGAGAGAGAATATTTCAGAGTCAATTGGCAGAATTGAATCTGAAGATTACAGACGTGGATTTACGTCTCTATATAATGCTGGAAAGAATGGCACACCGTATGAAGATACCAATGAGATAGATGAGCTGAAGTTTTATGCAAACGCGTGTCAAAATCTAGTAAGATATATGAAGATACGTAGCGAAGGTGATTTATACCAAGCCTTGTGTCGGGCGTTTCCAGACGTGCCCAGAAAGGTGTTCAAGTTATTCTGGACCTATGACGGGCAAGTAAACTTGGAGTTTGTCAGACCTCTGATGTGGGGCGGTAAGGATTTGGTCTCTCATTTGAGAGGTAAGGAGTTTGAGCCCTATCAAAGTGATGTCATTCCGACTAATTGTGTTGGAGGTTGGCATGCACAAAGCGGTGGACCGATTCCCGTATCCGTTGGTGGTGATGAATGCAGAGGCTTCTATGTCGACGGCGGCTATTTGGTGAGGGCTACCGACGACCCGGTGCGATGCCCAAATGGCCTTGCCGGATCGCGATTGGTTTTAGGTCGGGGATGTGACCGGATTTGGTTTTGTGGAGATGTAAAGGATCCGGATCTTGGTGGCGGCGCCGGGGTCGCGATTTTGGGATGGTTGGGGATAGCGAGTCCGCCCATTGTCATGGGTTGGCGGGAAGCTTCTCTCCGCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

440

Amino Acids

49.74

Weight (kDa)

6.57

Isoelectric Point (pI)

47.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000442)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43021 FvH4_6g46860 FvH4_6g46860 FvH4_6g46860 FvH4_6g46860 FvH4_6g46882 FvH4_6g51201
rosa_chinensis RchiOBHm_Chr2g0171801 RchiOBHm_Chr6g0301581 RchiOBHm_Chr7g0179011
rosa_laevigata RLG00000005529 RLG00000009488 RLG00000017141 RLG00000019517 RLG00000022054 RLG00000022057 RLG00000022071 RLG00000022073 RLG00000022076 RLG00000022284 RLG00000023212 RLG00000023370 RLG00000024583 RLG00000027622 RLG00000033172
rosa_multiflora Rmu_sc0000888.1_g000012 Rmu_sc0002026.1_g000021
rosa_roxburghii Rroxscaffold_1G00033790 Rroxscaffold_2G00080150 Rroxscaffold_2G00080220 Rroxscaffold_2G00080240 Rroxscaffold_2G00080330 Rroxscaffold_2G00080440 Rroxscaffold_2G00080470 Rroxscaffold_4G00323360 Rroxscaffold_5G00345900
rosa_rugosa Rorug02G0085600 Rorug02G0555900 Rorug02G0556000 Rorug02G0556200 Rorug02G0556300
rosa_samantha Rh1AG323200 Rh1BG273400 Rh2AG630700 Rh2AG630900 Rh2AG631900 Rh2AG636400 Rh2BG636800 Rh2BG641800 Rh2BG641900 Rh2BG642000 Rh2BG643800 Rh2BG644200 Rh2BG644700 Rh2BG645400 Rh2BG649800 Rh2CG610100 Rh2CG610200 Rh2CG610900 Rh2CG611000 Rh2CG611100 Rh2CG611800 Rh2CG612100 Rh2CG612300 Rh2CG612400 Rh2DG357300 Rh2DG652600 Rh2DG652800 Rh2DG652900 Rh2DG653100 Rh2DG658100 Rh2DG659200 Rh2DG659300 Rh2DG659800 Rh2DG660100 Rh2DG660300 Rh2DG660400 Rh3AG273000 Rh3DG210900 Rh4AG004400 Rh4AG104800 Rh4AG105200 Rh4AG433400 Rh5AG430100 Rh5BG445500 Rh6AG494800 Rh6DG386400 Rh7AG193900 Rh7CG200400
rosa_wichuraiana Rw2G052220 Rw2G052280 Rw2G052290 Rw2G052320 Rw2G052330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1238
AccB7I CCANNNNNTGG 1 cut(s) 548
AccI GTMKAC 1 cut(s) 1098
AccII CGCG 4 cut(s) 785, 1165, 1250, 1317
AccIII TCCGGA 1 cut(s) 1222
AciI CCGC 8 cut(s) 634, 945, 1044, 1104, 1236, 1280, 1300, 1315
AclI AACGTT 1 cut(s) 530
AclWI GGATC 8 cut(s) 219, 232, 417, 566, 1168, 1214, 1227, 1233
AcuI CTGAAG 3 cut(s) 434, 702, 788
AcyI GRCGYC 1 cut(s) 1239
AfiI CCNNNNNNNGG 4 cut(s) 548, 849, 903, 1229
AflII CTTAAG 1 cut(s) 517
AflIII ACRYGT 1 cut(s) 783
AgsI TTSAA 6 cut(s) 185, 198, 317, 461, 677, 883
AjiI CACGTC 2 cut(s) 695, 865
AluBI AGCT 5 cut(s) 233, 266, 476, 766, 1307
AluI AGCT 5 cut(s) 233, 266, 476, 766, 1307
Alw21I GWGCWC 1 cut(s) 303
Alw26I GTCTC 2 cut(s) 711, 964
Alw44I GTGCAC 1 cut(s) 299
AlwI GGATC 8 cut(s) 219, 232, 417, 566, 1168, 1214, 1227, 1233
Aor13HI TCCGGA 1 cut(s) 1222
AoxI GGCC 1 cut(s) 1150
ApaLI GTGCAC 1 cut(s) 299
ApeKI GCWGC 3 cut(s) 143, 321, 439
ArsI GACNNNNNNTTYG 4 cut(s) 329, 361, 585, 617
AspLEI GCGC 1 cut(s) 1241
AspS9I GGNCC 2 cut(s) 894, 1049
AsuC2I CCSGG 2 cut(s) 1133, 1243
AsuHPI GGTGA 3 cut(s) 839, 1085, 1126
AsuII TTCGAA 1 cut(s) 13
AvaII GGWCC 2 cut(s) 894, 1049
BaeGI GKGCMC 2 cut(s) 303, 870
BamHI GGATCC 2 cut(s) 224, 1219
BanI GGYRCC 1 cut(s) 1238
BanII GRGCYC 1 cut(s) 990
BarI GAAGNNNNNNTAC 2 cut(s) 7, 39
BbsI GAAGAC 1 cut(s) 422
Bbv12I GWGCWC 1 cut(s) 303
BbvI GCAGC 3 cut(s) 155, 308, 426
BccI CCATC 3 cut(s) 202, 499, 1254
BceAI ACGGC 1 cut(s) 1117
BciVI GTATCC 1 cut(s) 1072
BcnI CCSGG 2 cut(s) 1133, 1243
BcoDI GTCTC 2 cut(s) 711, 964
BfaI CTAG 7 cut(s) 54, 72, 230, 261, 560, 581, 797
BfoI RGCGCY 1 cut(s) 1242
BfrI CTTAAG 1 cut(s) 517
BfuI GTATCC 1 cut(s) 1072
BglI GCCNNNNNGGC 1 cut(s) 1149
BisI GCNGC 6 cut(s) 144, 322, 440, 634, 1105, 1237
BlsI GCNGC 6 cut(s) 145, 323, 441, 635, 1106, 1238
Bme1390I CCNGG 2 cut(s) 1133, 1243
Bme18I GGWCC 2 cut(s) 894, 1049
BmgBI CACGTC 2 cut(s) 695, 865
BmgT120I GGNCC 2 cut(s) 894, 1049
BmiI GGNNCC 3 cut(s) 226, 1221, 1240
BmrFI CCNGG 2 cut(s) 1133, 1243
BmrI ACTGGG 1 cut(s) 558
BmsI GCATC 2 cut(s) 634, 1130
BmuI ACTGGG 1 cut(s) 558
BoxI GACNNNNGTC 1 cut(s) 594
BpiI GAAGAC 1 cut(s) 422
Bpu14I TTCGAA 1 cut(s) 13
BpuEI CTTGAG 1 cut(s) 175
BpuMI CCSGG 2 cut(s) 1133, 1243
BsaAI YACGTR 1 cut(s) 818
BsaBI GATNNNNATC 1 cut(s) 1224
BsaHI GRCGYC 1 cut(s) 1239
BsaI GGTCTC 1 cut(s) 964
BsaJI CCNNGG 2 cut(s) 294, 1242
BsaWI WCCGGW 2 cut(s) 1191, 1222
Bsc4I CCNNNNNNNGG 4 cut(s) 548, 849, 903, 1229
Bse1I ACTGG 2 cut(s) 553, 575
Bse3DI GCAATG 1 cut(s) 177
Bse8I GATNNNNATC 1 cut(s) 1224
BseAI TCCGGA 1 cut(s) 1222
BseDI CCNNGG 2 cut(s) 294, 1242
BseGI GGATG 6 cut(s) 181, 189, 475, 491, 1190, 1265
BseJI GATNNNNATC 1 cut(s) 1224
BseLI CCNNNNNNNGG 4 cut(s) 548, 849, 903, 1229
BseMI GCAATG 1 cut(s) 177
BseMII CTCAG 1 cut(s) 470
BseNI ACTGG 2 cut(s) 553, 575
BseSI GKGCMC 2 cut(s) 303, 870
BseXI GCAGC 3 cut(s) 155, 308, 426
Bsh1236I CGCG 4 cut(s) 785, 1165, 1250, 1317
BshFI GGCC 1 cut(s) 1152
BshNI GGYRCC 1 cut(s) 1238
BsiHKAI GWGCWC 1 cut(s) 303
BsiSI CCGG 5 cut(s) 1133, 1158, 1192, 1223, 1242
BslI CCNNNNNNNGG 4 cut(s) 548, 849, 903, 1229
BsmAI GTCTC 2 cut(s) 711, 964
BsmBI CGTCTC 1 cut(s) 711
BsmI GAATGC 1 cut(s) 1085
BsnI GGCC 1 cut(s) 1152
Bso31I GGTCTC 1 cut(s) 964
Bsp119I TTCGAA 1 cut(s) 13
Bsp1286I GDGCHC 3 cut(s) 303, 870, 990
Bsp13I TCCGGA 1 cut(s) 1222
Bsp143I GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
Bsp19I CCATGG 1 cut(s) 294
Bsp68I TCGCGA 2 cut(s) 1165, 1250
BspACI CCGC 8 cut(s) 634, 945, 1044, 1104, 1236, 1280, 1300, 1315
BspANI GGCC 1 cut(s) 1152
BspCNI CTCAG 1 cut(s) 471
BspEI TCCGGA 1 cut(s) 1222
BspFNI CGCG 4 cut(s) 785, 1165, 1250, 1317
BspLI GGNNCC 3 cut(s) 226, 1221, 1240
BspPI GGATC 8 cut(s) 219, 232, 417, 566, 1168, 1214, 1227, 1233
BspT104I TTCGAA 1 cut(s) 13
BspT107I GGYRCC 1 cut(s) 1238
BspTI CTTAAG 1 cut(s) 517
BspTNI GGTCTC 1 cut(s) 964
BsrDI GCAATG 1 cut(s) 177
BsrI ACTGG 2 cut(s) 553, 575
BssECI CCNNGG 2 cut(s) 294, 1242
BssMI GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
BssNI GRCGYC 1 cut(s) 1239
BssT1I CCWWGG 1 cut(s) 294
Bst4CI ACNGT 2 cut(s) 138, 738
BstACI GRCGYC 1 cut(s) 1239
BstAFI CTTAAG 1 cut(s) 517
BstBAI YACGTR 1 cut(s) 818
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 1035
BstDEI CTNAG 1 cut(s) 479
BstDSI CCRYGG 1 cut(s) 294
BstF5I GGATG 6 cut(s) 181, 189, 475, 491, 1190, 1265
BstFNI CGCG 4 cut(s) 785, 1165, 1250, 1317
BstH2I RGCGCY 1 cut(s) 1242
BstHHI GCGC 1 cut(s) 1241
BstKTI GATC 7 cut(s) 227, 255, 412, 574, 1163, 1222, 1228
BstMAI GTCTC 2 cut(s) 711, 964
BstMBI GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
BstMWI GCNNNNNNNGC 3 cut(s) 560, 1149, 1247
BstNSI RCATGY 2 cut(s) 625, 1037
BstPAI GACNNNNGTC 1 cut(s) 594
BstSCI CCNGG 2 cut(s) 1131, 1241
BstSLI GKGCMC 2 cut(s) 303, 870
BstSNI TACGTA 1 cut(s) 818
BstUI CGCG 4 cut(s) 785, 1165, 1250, 1317
BstV1I GCAGC 3 cut(s) 155, 308, 426
BstV2I GAAGAC 1 cut(s) 422
BstX2I RGATCY 4 cut(s) 224, 409, 1219, 1225
BstXI CCANNNNNNTGG 1 cut(s) 1291
BstYI RGATCY 4 cut(s) 224, 409, 1219, 1225
BsuI GTATCC 1 cut(s) 1072
BsuRI GGCC 1 cut(s) 1152
BtgI CCRYGG 1 cut(s) 294
BtgZI GCGATG 1 cut(s) 1153
BtrI CACGTC 2 cut(s) 695, 865
BtsCI GGATG 6 cut(s) 181, 189, 475, 491, 1190, 1265
BtsIMutI CAGTG 2 cut(s) 471, 582
BtuMI TCGCGA 2 cut(s) 1165, 1250
Cac8I GCNNGC 1 cut(s) 1035
CfoI GCGC 1 cut(s) 1241
Cfr13I GGNCC 2 cut(s) 894, 1049
CviAII CATG 6 cut(s) 295, 512, 599, 622, 1034, 1291
DdeI CTNAG 1 cut(s) 479
DinI GGCGCC 1 cut(s) 1240
DpnI GATC 7 cut(s) 226, 254, 411, 573, 1162, 1221, 1227
DpnII GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
DraI TTTAAA 1 cut(s) 237
EciI GGCGGA 1 cut(s) 1269
Eco105I TACGTA 1 cut(s) 818
Eco130I CCWWGG 1 cut(s) 294
Eco24I GRGCYC 1 cut(s) 990
Eco31I GGTCTC 1 cut(s) 964
Eco47I GGWCC 2 cut(s) 894, 1049
Eco57I CTGAAG 3 cut(s) 434, 702, 788
EcoT14I CCWWGG 1 cut(s) 294
EcoT22I ATGCAT 1 cut(s) 627
EcoT38I GRGCYC 1 cut(s) 990
EgeI GGCGCC 1 cut(s) 1240
EheI GGCGCC 1 cut(s) 1240
ErhI CCWWGG 1 cut(s) 294
Esp3I CGTCTC 1 cut(s) 711
FaeI CATG 6 cut(s) 298, 515, 602, 625, 1037, 1294
FatI CATG 6 cut(s) 294, 511, 598, 621, 1033, 1290
FauI CCCGC 1 cut(s) 1293
FauNDI CATATG 1 cut(s) 400
FblI GTMKAC 1 cut(s) 1098
Fnu4HI GCNGC 6 cut(s) 144, 322, 440, 634, 1105, 1237
FokI GGATG 6 cut(s) 176, 188, 478, 482, 1197, 1272
FriOI GRGCYC 1 cut(s) 990
Fsp4HI GCNGC 6 cut(s) 144, 322, 440, 634, 1105, 1237
FspBI CTAG 7 cut(s) 54, 72, 230, 261, 560, 581, 797
GlaI GCGC 1 cut(s) 1240
GluI GCNGC 6 cut(s) 144, 322, 440, 634, 1105, 1237
HaeII RGCGCY 1 cut(s) 1242
HaeIII GGCC 1 cut(s) 1152
HapII CCGG 5 cut(s) 1133, 1158, 1192, 1223, 1242
HhaI GCGC 1 cut(s) 1241
Hin1I GRCGYC 1 cut(s) 1239
Hin1II CATG 6 cut(s) 298, 515, 602, 625, 1037, 1294
Hin6I GCGC 1 cut(s) 1239
HinP1I GCGC 1 cut(s) 1239
HincII GTYRAC 2 cut(s) 82, 1099
HindII GTYRAC 2 cut(s) 82, 1099
HindIII AAGCTT 1 cut(s) 1305
HinfI GANTC 6 cut(s) 75, 483, 659, 677, 1054, 1276
HpaII CCGG 5 cut(s) 1133, 1158, 1192, 1223, 1242
HphI GGTGA 3 cut(s) 839, 1085, 1126
Hpy166II GTNNAC 7 cut(s) 24, 82, 301, 362, 913, 1049, 1099
Hpy188I TCNGA 8 cut(s) 94, 414, 480, 658, 682, 929, 936, 1011
Hpy188III TCNNGA 8 cut(s) 54, 72, 261, 860, 892, 1164, 1223, 1249
Hpy8I GTNNAC 7 cut(s) 24, 82, 301, 362, 913, 1049, 1099
Hpy99I CGWCG 3 cut(s) 377, 1103, 1130
HpyAV CCTTC 5 cut(s) 54, 78, 311, 400, 818
HpyCH4III ACNGT 2 cut(s) 138, 738
HpyCH4IV ACGT 7 cut(s) 530, 595, 613, 694, 704, 817, 864
HpyCH4V TGCA 9 cut(s) 143, 170, 301, 324, 617, 625, 779, 1037, 1083
HpyF10VI GCNNNNNNNGC 3 cut(s) 560, 1149, 1247
HpyF3I CTNAG 1 cut(s) 479
HpySE526I ACGT 7 cut(s) 530, 595, 613, 694, 704, 817, 864
Hsp92I GRCGYC 1 cut(s) 1239
Hsp92II CATG 6 cut(s) 298, 515, 602, 625, 1037, 1294
HspAI GCGC 1 cut(s) 1239
KasI GGCGCC 1 cut(s) 1238
Kpn2I TCCGGA 1 cut(s) 1222
Kzo9I GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
Lsp1109I GCAGC 3 cut(s) 155, 308, 426
LweI GCATC 2 cut(s) 634, 1130
MaeI CTAG 7 cut(s) 54, 72, 230, 261, 560, 581, 797
MaeII ACGT 7 cut(s) 530, 595, 613, 694, 704, 817, 864
MaeIII GTNAC 1 cut(s) 1187
MalI GATC 7 cut(s) 226, 254, 411, 573, 1162, 1221, 1227
MboI GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
MboII GAAGA 5 cut(s) 27, 427, 695, 755, 823
MfeI CAATTG 1 cut(s) 663
MflI RGATCY 4 cut(s) 224, 409, 1219, 1225
MhlI GDGCHC 3 cut(s) 303, 870, 990
MluCI AATT 5 cut(s) 307, 379, 663, 672, 1015
MluI ACGCGT 1 cut(s) 783
Mly113I GGCGCC 1 cut(s) 1239
MlyI GAGTC 3 cut(s) 69, 668, 1285
MmeI TCCRAC 3 cut(s) 155, 1003, 1034
MnlI CCTC 6 cut(s) 344, 942, 965, 1019, 1079, 1110
Mph1103I ATGCAT 1 cut(s) 627
MroI TCCGGA 1 cut(s) 1222
MseI TTAA 4 cut(s) 236, 246, 501, 518
MslI CAYNNNNRTG 2 cut(s) 248, 1289
MspCI CTTAAG 1 cut(s) 517
MspI CCGG 5 cut(s) 1133, 1158, 1192, 1223, 1242
MspR9I CCNGG 2 cut(s) 1133, 1243
MunI CAATTG 1 cut(s) 663
Mva1269I GAATGC 1 cut(s) 1085
MvnI CGCG 4 cut(s) 785, 1165, 1250, 1317
MwoI GCNNNNNNNGC 3 cut(s) 560, 1149, 1247
NarI GGCGCC 1 cut(s) 1239
NciI CCSGG 2 cut(s) 1133, 1243
NcoI CCATGG 1 cut(s) 294
NdeI CATATG 1 cut(s) 400
NdeII GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
NlaIII CATG 6 cut(s) 298, 515, 602, 625, 1037, 1294
NlaIV GGNNCC 3 cut(s) 226, 1221, 1240
NmuCI GTSAC 1 cut(s) 1187
NruI TCGCGA 2 cut(s) 1165, 1250
NsiI ATGCAT 1 cut(s) 627
NspI RCATGY 2 cut(s) 625, 1037
NspV TTCGAA 1 cut(s) 13
PaeI GCATGC 1 cut(s) 1037
PctI GAATGC 1 cut(s) 1085
PfeI GAWTC 3 cut(s) 483, 677, 1054
PflMI CCANNNNNTGG 1 cut(s) 548
PkrI GCNGC 6 cut(s) 145, 323, 441, 635, 1106, 1238
PleI GAGTC 3 cut(s) 69, 667, 1284
PluTI GGCGCC 1 cut(s) 1242
PpsI GAGTC 3 cut(s) 69, 667, 1284
Ppu21I YACGTR 1 cut(s) 818
PshAI GACNNNNGTC 1 cut(s) 594
Psp1406I AACGTT 1 cut(s) 530
PspN4I GGNNCC 3 cut(s) 226, 1221, 1240
PspPI GGNCC 2 cut(s) 894, 1049
PsuI RGATCY 4 cut(s) 224, 409, 1219, 1225
RruI TCGCGA 2 cut(s) 1165, 1250
RseI CAYNNNNRTG 2 cut(s) 248, 1289
SalI GTCGAC 1 cut(s) 1097
SaqAI TTAA 4 cut(s) 236, 246, 501, 518
SatI GCNGC 6 cut(s) 144, 322, 440, 634, 1105, 1237
Sau3AI GATC 7 cut(s) 224, 252, 409, 571, 1160, 1219, 1225
Sau96I GGNCC 2 cut(s) 894, 1049
SchI GAGTC 3 cut(s) 69, 668, 1285
ScrFI CCNGG 2 cut(s) 1133, 1243
SduI GDGCHC 3 cut(s) 303, 870, 990
SfaNI GCATC 2 cut(s) 634, 1130
SfoI GGCGCC 1 cut(s) 1240
SfuI TTCGAA 1 cut(s) 13
SinI GGWCC 2 cut(s) 894, 1049
SmiMI CAYNNNNRTG 2 cut(s) 248, 1289
SmlI CTYRAG 2 cut(s) 154, 517
SmoI CTYRAG 2 cut(s) 154, 517
SnaBI TACGTA 1 cut(s) 818
SphI GCATGC 1 cut(s) 1037
Sse9I AATT 5 cut(s) 307, 379, 663, 672, 1015
SsiI CCGC 8 cut(s) 634, 945, 1044, 1104, 1236, 1280, 1300, 1315
SspDI GGCGCC 1 cut(s) 1238
SspI AATATT 1 cut(s) 652
SspMI CTAG 7 cut(s) 54, 72, 230, 261, 560, 581, 797
StyD4I CCNGG 2 cut(s) 1131, 1241
StyI CCWWGG 1 cut(s) 294
TaaI ACNGT 2 cut(s) 138, 738
TaiI ACGT 7 cut(s) 533, 598, 616, 697, 707, 820, 867
TaqI TCGA 3 cut(s) 13, 603, 1098
TaqII GACCGA 1 cut(s) 1066
TasI AATT 5 cut(s) 307, 379, 663, 672, 1015
TauI GCSGC 3 cut(s) 636, 1107, 1239
TfiI GAWTC 3 cut(s) 483, 677, 1054
Tru1I TTAA 4 cut(s) 236, 246, 501, 518
Tru9I TTAA 4 cut(s) 236, 246, 501, 518
TscAI CASTG 2 cut(s) 471, 582
TseFI GTSAC 1 cut(s) 1187
TseI GCWGC 3 cut(s) 143, 321, 439
Tsp45I GTSAC 1 cut(s) 1187
TspDTI ATGAA 6 cut(s) 475, 486, 500, 756, 824, 1092
TspGWI ACGGA 2 cut(s) 182, 1054
TspRI CASTG 2 cut(s) 471, 582
Van91I CCANNNNNTGG 1 cut(s) 548
Vha464I CTTAAG 1 cut(s) 517
VneI GTGCAC 1 cut(s) 299
VpaK11BI GGWCC 2 cut(s) 894, 1049
XbaI TCTAGA 3 cut(s) 53, 71, 260
XceI RCATGY 2 cut(s) 625, 1037
XmiI GTMKAC 1 cut(s) 1098
XspI CTAG 7 cut(s) 54, 72, 230, 261, 560, 581, 797
Zsp2I ATGCAT 1 cut(s) 627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.