Zinc finger protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 910 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 548 |
| AccI | GTMKAC | 1 cut(s) | 1038 |
| AciI | CCGC | 1 cut(s) | 634 |
| AclI | AACGTT | 1 cut(s) | 530 |
| AclWI | GGATC | 3 cut(s) | 219, 232, 417 |
| AcuI | CTGAAG | 3 cut(s) | 434, 702, 788 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 548 |
| AflII | CTTAAG | 1 cut(s) | 517 |
| AgsI | TTSAA | 5 cut(s) | 185, 198, 317, 461, 677 |
| AjiI | CACGTC | 1 cut(s) | 695 |
| AluBI | AGCT | 4 cut(s) | 233, 266, 476, 766 |
| AluI | AGCT | 4 cut(s) | 233, 266, 476, 766 |
| Alw21I | GWGCWC | 1 cut(s) | 303 |
| Alw26I | GTCTC | 1 cut(s) | 711 |
| Alw44I | GTGCAC | 1 cut(s) | 299 |
| AlwI | GGATC | 3 cut(s) | 219, 232, 417 |
| AoxI | GGCC | 1 cut(s) | 551 |
| ApaLI | GTGCAC | 1 cut(s) | 299 |
| ApeKI | GCWGC | 2 cut(s) | 143, 439 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 585, 617 |
| AspS9I | GGNCC | 1 cut(s) | 551 |
| AsuII | TTCGAA | 1 cut(s) | 13 |
| AxyI | CCTNAGG | 1 cut(s) | 939 |
| BaeGI | GKGCMC | 1 cut(s) | 303 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 890, 923 |
| BamHI | GGATCC | 1 cut(s) | 224 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 7, 39 |
| BbsI | GAAGAC | 1 cut(s) | 422 |
| Bbv12I | GWGCWC | 1 cut(s) | 303 |
| BbvI | GCAGC | 2 cut(s) | 155, 426 |
| BccI | CCATC | 4 cut(s) | 202, 499, 506, 814 |
| BcoDI | GTCTC | 1 cut(s) | 711 |
| BfaI | CTAG | 6 cut(s) | 72, 261, 267, 581, 797, 888 |
| BfrI | CTTAAG | 1 cut(s) | 517 |
| BfuAI | ACCTGC | 1 cut(s) | 910 |
| BisI | GCNGC | 3 cut(s) | 144, 440, 634 |
| BlsI | GCNGC | 3 cut(s) | 145, 441, 635 |
| BmgBI | CACGTC | 1 cut(s) | 695 |
| BmgT120I | GGNCC | 1 cut(s) | 551 |
| BmiI | GGNNCC | 2 cut(s) | 226, 971 |
| BmrI | ACTGGG | 2 cut(s) | 558, 969 |
| BmsI | GCATC | 2 cut(s) | 634, 972 |
| BmuI | ACTGGG | 2 cut(s) | 558, 969 |
| BoxI | GACNNNNGTC | 1 cut(s) | 594 |
| BpiI | GAAGAC | 1 cut(s) | 422 |
| BpmI | CTGGAG | 1 cut(s) | 956 |
| Bpu14I | TTCGAA | 1 cut(s) | 13 |
| BpuEI | CTTGAG | 2 cut(s) | 175, 896 |
| BsaJI | CCNNGG | 1 cut(s) | 294 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 548 |
| Bse1I | ACTGG | 3 cut(s) | 553, 964, 973 |
| Bse21I | CCTNAGG | 1 cut(s) | 939 |
| Bse3DI | GCAATG | 1 cut(s) | 177 |
| BseDI | CCNNGG | 1 cut(s) | 294 |
| BseGI | GGATG | 5 cut(s) | 181, 189, 475, 491, 820 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 548 |
| BseMI | GCAATG | 1 cut(s) | 177 |
| BseMII | CTCAG | 2 cut(s) | 470, 930 |
| BseNI | ACTGG | 3 cut(s) | 553, 964, 973 |
| BseRI | GAGGAG | 1 cut(s) | 956 |
| BseSI | GKGCMC | 1 cut(s) | 303 |
| BseXI | GCAGC | 2 cut(s) | 155, 426 |
| BshFI | GGCC | 1 cut(s) | 553 |
| BsiHKAI | GWGCWC | 1 cut(s) | 303 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 548 |
| BsmAI | GTCTC | 1 cut(s) | 711 |
| BsmBI | CGTCTC | 1 cut(s) | 711 |
| BsnI | GGCC | 1 cut(s) | 553 |
| Bsp119I | TTCGAA | 1 cut(s) | 13 |
| Bsp1286I | GDGCHC | 1 cut(s) | 303 |
| Bsp143I | GATC | 4 cut(s) | 224, 252, 409, 571 |
| Bsp19I | CCATGG | 1 cut(s) | 294 |
| BspACI | CCGC | 1 cut(s) | 634 |
| BspANI | GGCC | 1 cut(s) | 553 |
| BspCNI | CTCAG | 2 cut(s) | 471, 931 |
| BspLI | GGNNCC | 2 cut(s) | 226, 971 |
| BspMI | ACCTGC | 1 cut(s) | 910 |
| BspPI | GGATC | 3 cut(s) | 219, 232, 417 |
| BspT104I | TTCGAA | 1 cut(s) | 13 |
| BspTI | CTTAAG | 1 cut(s) | 517 |
| BsrDI | GCAATG | 1 cut(s) | 177 |
| BsrI | ACTGG | 3 cut(s) | 553, 964, 973 |
| BssECI | CCNNGG | 1 cut(s) | 294 |
| BssMI | GATC | 4 cut(s) | 224, 252, 409, 571 |
| BssT1I | CCWWGG | 1 cut(s) | 294 |
| Bst4CI | ACNGT | 2 cut(s) | 138, 738 |
| Bst6I | CTCTTC | 1 cut(s) | 959 |
| BstAFI | CTTAAG | 1 cut(s) | 517 |
| BstBI | TTCGAA | 1 cut(s) | 13 |
| BstDEI | CTNAG | 2 cut(s) | 479, 939 |
| BstDSI | CCRYGG | 1 cut(s) | 294 |
| BstF5I | GGATG | 5 cut(s) | 181, 189, 475, 491, 820 |
| BstKTI | GATC | 4 cut(s) | 227, 255, 412, 574 |
| BstMAI | GTCTC | 1 cut(s) | 711 |
| BstMBI | GATC | 4 cut(s) | 224, 252, 409, 571 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 976 |
| BstNSI | RCATGY | 2 cut(s) | 625, 1020 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 594 |
| BstSLI | GKGCMC | 1 cut(s) | 303 |
| BstV1I | GCAGC | 2 cut(s) | 155, 426 |
| BstV2I | GAAGAC | 1 cut(s) | 422 |
| BstX2I | RGATCY | 2 cut(s) | 224, 409 |
| BstYI | RGATCY | 2 cut(s) | 224, 409 |
| Bsu36I | CCTNAGG | 1 cut(s) | 939 |
| BsuRI | GGCC | 1 cut(s) | 553 |
| BtgI | CCRYGG | 1 cut(s) | 294 |
| BtrI | CACGTC | 1 cut(s) | 695 |
| BtsCI | GGATG | 5 cut(s) | 181, 189, 475, 491, 820 |
| BtsIMutI | CAGTG | 1 cut(s) | 471 |
| BveI | ACCTGC | 1 cut(s) | 910 |
| Cfr13I | GGNCC | 1 cut(s) | 551 |
| CseI | GACGC | 1 cut(s) | 1049 |
| CviAII | CATG | 5 cut(s) | 295, 599, 622, 986, 1017 |
| DdeI | CTNAG | 2 cut(s) | 479, 939 |
| DpnI | GATC | 4 cut(s) | 226, 254, 411, 573 |
| DpnII | GATC | 4 cut(s) | 224, 252, 409, 571 |
| DraI | TTTAAA | 1 cut(s) | 237 |
| Eam1104I | CTCTTC | 1 cut(s) | 959 |
| EarI | CTCTTC | 1 cut(s) | 959 |
| Eco130I | CCWWGG | 1 cut(s) | 294 |
| Eco57I | CTGAAG | 3 cut(s) | 434, 702, 788 |
| Eco81I | CCTNAGG | 1 cut(s) | 939 |
| EcoT14I | CCWWGG | 1 cut(s) | 294 |
| EcoT22I | ATGCAT | 2 cut(s) | 627, 987 |
| ErhI | CCWWGG | 1 cut(s) | 294 |
| Esp3I | CGTCTC | 1 cut(s) | 711 |
| FaeI | CATG | 5 cut(s) | 298, 602, 625, 989, 1020 |
| FatI | CATG | 5 cut(s) | 294, 598, 621, 985, 1016 |
| FauNDI | CATATG | 3 cut(s) | 400, 871, 921 |
| FblI | GTMKAC | 1 cut(s) | 1038 |
| Fnu4HI | GCNGC | 3 cut(s) | 144, 440, 634 |
| FokI | GGATG | 5 cut(s) | 176, 188, 478, 482, 827 |
| Fsp4HI | GCNGC | 3 cut(s) | 144, 440, 634 |
| FspBI | CTAG | 6 cut(s) | 72, 261, 267, 581, 797, 888 |
| GluI | GCNGC | 3 cut(s) | 144, 440, 634 |
| GsuI | CTGGAG | 1 cut(s) | 956 |
| HaeIII | GGCC | 1 cut(s) | 553 |
| HgaI | GACGC | 1 cut(s) | 1049 |
| Hin1II | CATG | 5 cut(s) | 298, 602, 625, 989, 1020 |
| HincII | GTYRAC | 3 cut(s) | 82, 957, 1039 |
| HindII | GTYRAC | 3 cut(s) | 82, 957, 1039 |
| HinfI | GANTC | 4 cut(s) | 75, 483, 659, 677 |
| Hpy166II | GTNNAC | 6 cut(s) | 24, 82, 301, 362, 957, 1039 |
| Hpy188I | TCNGA | 6 cut(s) | 94, 414, 480, 658, 682, 1027 |
| Hpy188III | TCNNGA | 4 cut(s) | 72, 261, 913, 938 |
| Hpy8I | GTNNAC | 6 cut(s) | 24, 82, 301, 362, 957, 1039 |
| Hpy99I | CGWCG | 2 cut(s) | 377, 1043 |
| HpyAV | CCTTC | 5 cut(s) | 54, 78, 311, 400, 805 |
| HpyCH4III | ACNGT | 2 cut(s) | 138, 738 |
| HpyCH4IV | ACGT | 5 cut(s) | 530, 595, 613, 694, 704 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 976 |
| HpyF3I | CTNAG | 2 cut(s) | 479, 939 |
| HpySE526I | ACGT | 5 cut(s) | 530, 595, 613, 694, 704 |
| Hsp92II | CATG | 5 cut(s) | 298, 602, 625, 989, 1020 |
| Kzo9I | GATC | 4 cut(s) | 224, 252, 409, 571 |
| LmnI | GCTCC | 1 cut(s) | 975 |
| LpnPI | CCDG | 9 cut(s) | 134, 534, 600, 705, 822, 915, 945, 951, 986 |
| Lsp1109I | GCAGC | 2 cut(s) | 155, 426 |
| LweI | GCATC | 2 cut(s) | 634, 972 |
| MaeI | CTAG | 6 cut(s) | 72, 261, 267, 581, 797, 888 |
| MaeII | ACGT | 5 cut(s) | 530, 595, 613, 694, 704 |
| MalI | GATC | 4 cut(s) | 226, 254, 411, 573 |
| MboI | GATC | 4 cut(s) | 224, 252, 409, 571 |
| MboII | GAAGA | 7 cut(s) | 27, 427, 695, 755, 887, 958, 976 |
| MfeI | CAATTG | 1 cut(s) | 663 |
| MflI | RGATCY | 2 cut(s) | 224, 409 |
| MhlI | GDGCHC | 1 cut(s) | 303 |
| MluCI | AATT | 4 cut(s) | 307, 379, 663, 672 |
| MlyI | GAGTC | 2 cut(s) | 69, 668 |
| MmeI | TCCRAC | 2 cut(s) | 155, 1022 |
| MnlI | CCTC | 4 cut(s) | 344, 934, 960, 1027 |
| Mph1103I | ATGCAT | 2 cut(s) | 627, 987 |
| MseI | TTAA | 6 cut(s) | 236, 246, 501, 518, 894, 1005 |
| MslI | CAYNNNNRTG | 1 cut(s) | 248 |
| MspCI | CTTAAG | 1 cut(s) | 517 |
| MunI | CAATTG | 1 cut(s) | 663 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 976 |
| NcoI | CCATGG | 1 cut(s) | 294 |
| NdeI | CATATG | 3 cut(s) | 400, 871, 921 |
| NdeII | GATC | 4 cut(s) | 224, 252, 409, 571 |
| NlaIII | CATG | 5 cut(s) | 298, 602, 625, 989, 1020 |
| NlaIV | GGNNCC | 2 cut(s) | 226, 971 |
| NsiI | ATGCAT | 2 cut(s) | 627, 987 |
| NspI | RCATGY | 2 cut(s) | 625, 1020 |
| NspV | TTCGAA | 1 cut(s) | 13 |
| PfeI | GAWTC | 2 cut(s) | 483, 677 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 548 |
| PkrI | GCNGC | 3 cut(s) | 145, 441, 635 |
| PleI | GAGTC | 2 cut(s) | 69, 667 |
| PpsI | GAGTC | 2 cut(s) | 69, 667 |
| PshAI | GACNNNNGTC | 1 cut(s) | 594 |
| Psp1406I | AACGTT | 1 cut(s) | 530 |
| PspN4I | GGNNCC | 2 cut(s) | 226, 971 |
| PspPI | GGNCC | 1 cut(s) | 551 |
| PsuI | RGATCY | 2 cut(s) | 224, 409 |
| RseI | CAYNNNNRTG | 1 cut(s) | 248 |
| SalI | GTCGAC | 1 cut(s) | 1037 |
| SaqAI | TTAA | 6 cut(s) | 236, 246, 501, 518, 894, 1005 |
| SatI | GCNGC | 3 cut(s) | 144, 440, 634 |
| Sau3AI | GATC | 4 cut(s) | 224, 252, 409, 571 |
| Sau96I | GGNCC | 1 cut(s) | 551 |
| SchI | GAGTC | 2 cut(s) | 69, 668 |
| SduI | GDGCHC | 1 cut(s) | 303 |
| SfaNI | GCATC | 2 cut(s) | 634, 972 |
| SfuI | TTCGAA | 1 cut(s) | 13 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 248 |
| SmlI | CTYRAG | 3 cut(s) | 154, 517, 911 |
| SmoI | CTYRAG | 3 cut(s) | 154, 517, 911 |
| Sse9I | AATT | 4 cut(s) | 307, 379, 663, 672 |
| SsiI | CCGC | 1 cut(s) | 634 |
| SspI | AATATT | 1 cut(s) | 652 |
| SspMI | CTAG | 6 cut(s) | 72, 261, 267, 581, 797, 888 |
| StyI | CCWWGG | 1 cut(s) | 294 |
| TaaI | ACNGT | 2 cut(s) | 138, 738 |
| TaiI | ACGT | 5 cut(s) | 533, 598, 616, 697, 707 |
| TaqI | TCGA | 4 cut(s) | 13, 349, 603, 1038 |
| TasI | AATT | 4 cut(s) | 307, 379, 663, 672 |
| TauI | GCSGC | 1 cut(s) | 636 |
| TfiI | GAWTC | 2 cut(s) | 483, 677 |
| Tru1I | TTAA | 6 cut(s) | 236, 246, 501, 518, 894, 1005 |
| Tru9I | TTAA | 6 cut(s) | 236, 246, 501, 518, 894, 1005 |
| TscAI | CASTG | 1 cut(s) | 471 |
| TseI | GCWGC | 2 cut(s) | 143, 439 |
| TspDTI | ATGAA | 5 cut(s) | 475, 486, 756, 824, 888 |
| TspGWI | ACGGA | 2 cut(s) | 182, 217 |
| TspRI | CASTG | 1 cut(s) | 471 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 548 |
| Vha464I | CTTAAG | 1 cut(s) | 517 |
| VneI | GTGCAC | 1 cut(s) | 299 |
| XbaI | TCTAGA | 2 cut(s) | 71, 260 |
| XceI | RCATGY | 2 cut(s) | 625, 1020 |
| XmiI | GTMKAC | 1 cut(s) | 1038 |
| XspI | CTAG | 6 cut(s) | 72, 261, 267, 581, 797, 888 |
| Zsp2I | ATGCAT | 2 cut(s) | 627, 987 |