Rorug02G0555900

Protein farnesyltransferase subunit

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
68272381 .. 68280895
8515 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0555900.1

Sequence Viewer

Length: 1869 bp
ATGGGCACAGCGTGTTCCTCTCTTTATTCCATGTACTCGCTCTATGGGAAACCGAGGGACTGGAACTTACAGGGTTTGCAAGTTTACTTTCGGTCAATAGTCATGTCTAAAGATTTTATCTACATGATATACTGCTTGACCTTTGTCACATCCCATCTTTCTCTCAAATTTGCCTTGATTCCCATTCTATGTCGGGCTCTCGTACATGTTGCCAAGTTCCTTAGGCGCAACTTTAGTCAATCCTCATTGTACAGGAAATACTTGGAAGAGCCTTGCGTTTGGGTCGAGTCAAACACAACTACCCTCAGCATACTCTCTTCACATGCCGAGATTGGAAATGGCTTTCTTTTGATTATATCTTTGTTCTCGTGGCAGCGCAACATTATACAGACATTCGTATATTGGCAGCTATTGAAGCTCATGTATCATGCTCCGGTGACTTCTGACTACCATCTGAGTGTGTGGACTAAGATAGGGAGGACAGTTCATCCATTCATCCACCGCTACGCCCCATTCTTGGAGACACCCGTTTCTACAATCCAGAGATGGTGGTTAAGACCTCCAATTCCAATTCAACTCGAATCTCCGATGGACTCCACCGCCAGCCTCCGGCAATCCTCCTCGTCCGCCGCGGCGGAGGAGATGATGGAGATGGAGATGGAGACCAAGCCATTGCTTACCAAGTTCCTGACCTATCCTCCTCCGGTTGCTGCCCAGCGTCGCCGTGCCAAACTCGGCTCGTCTTCGCTGGCCACGCCGCGTCCTAGCCGGCAGAATTCGTTCGGCCGGGATATAGGTCACGCGGCCAAGGAGACCTACTTGATTACTAGCCTCAGCTTCACGCTCCTTCAATACCTCGGGGTAGGCTACCGGTGGATCACAAGATTACTTGCTCTTGCTTGTTATGCCATGTTACTTATGCCGGGATTTCTTCAAGTTGCATATTGTTATTACTTTTCAAGCCACGTCCGGCGTAGTATTGTTTATGGAGATCAACCAAGAAATAGGTTGGATCTATATTTACCGACAAATACTGATGTGAAAAAGCCAGTTGTTGTGTTTGTAACTGGTGGAGCCTGGATTATTGGGTATAAAGCATGGGGTTCTCTTTTAGGTCTGCAGTTGGCTGAAAGAAACATCATAGTGGCATGTGTTGATTACAGAAATTTTCCCCAGGGTACCATCAGTGATATGGTTGAAGATGCTTCTCAGGGTATATCATATATCTGCAACAATATAGCAGACTATGGAGGTGACCCTGACAGAATCTATCTAATGGGGCAATCTGCTGGTGCGCATATTTCTTCTTGTGCTCTCTTGGAGCAAGCAATCAAAGAATCTAAGAAGGAAGAGATCATTTCTTGGAGCGTCTCTCAGATAAAGGCTTACTTTGGTTTATCTGGCGGGTATAATTTATTTAATTTAGTTGATCATTTTGATAGTCGTGGACTGTATCGATCCATTTTCTTAAGCATTATGGAAGGTGAAGAATCCTTCCATCAATTCTCTCCTGAAGTTAGAGTACAGGACCCAAACAATATAGATGCTGTTTCTATCTTGCCTCCTATCACTCTGTTCCATGGAACTGCAGATTATTCGATACCATCAGATGCCAGTAAAATTTTTGTAGATGTTCTTCAAAGGTTAGGAGCTAAAGCTGACTTGGTACTATATGATGGAAAGACGCATACAGACTTGTTTCTTCAAGATCCCTTAAGAGGTGGTAAAGACGAAATGTTTGACCAAATAGTTGCTGTAATACATGCCGATGATAAGGAAGCTCTTGAGCAAGATGCTGTGGCACCTCCTAGAAGACGCCTTGTTCCTGAGATCTTGTTGAAGTTGGCACGCAACATCAGCCCCTTTTAG

Protein Analysis

622

Amino Acids

70.48

Weight (kDa)

8.39

Isoelectric Point (pI)

52.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMEM33_Pom33 PF03661 28 - 144 9.8e-12 Transmembrane protein 33/Nucleoporin POM33
BD-FAE PF20434 337 - 544 4.6e-27 BD-FAE
COesterase PF00135 337 - 452 1.3e-13 Carboxylesterase family
Abhydrolase_3 PF07859 352 - 563 3.8e-15 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000442)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43021 FvH4_6g46860 FvH4_6g46860 FvH4_6g46860 FvH4_6g46860 FvH4_6g46882 FvH4_6g51201
rosa_chinensis RchiOBHm_Chr2g0171801 RchiOBHm_Chr6g0301581 RchiOBHm_Chr7g0179011
rosa_laevigata RLG00000005529 RLG00000009488 RLG00000017141 RLG00000019517 RLG00000022054 RLG00000022057 RLG00000022071 RLG00000022073 RLG00000022076 RLG00000022284 RLG00000023212 RLG00000023370 RLG00000024583 RLG00000027622 RLG00000033172
rosa_multiflora Rmu_sc0000888.1_g000012 Rmu_sc0002026.1_g000021
rosa_roxburghii Rroxscaffold_1G00033790 Rroxscaffold_2G00080150 Rroxscaffold_2G00080220 Rroxscaffold_2G00080240 Rroxscaffold_2G00080330 Rroxscaffold_2G00080440 Rroxscaffold_2G00080470 Rroxscaffold_4G00323360 Rroxscaffold_5G00345900
rosa_rugosa Rorug02G0085600 Rorug02G0555900 Rorug02G0556000 Rorug02G0556200 Rorug02G0556300
rosa_samantha Rh1AG323200 Rh1BG273400 Rh2AG630700 Rh2AG630900 Rh2AG631900 Rh2AG636400 Rh2BG636800 Rh2BG641800 Rh2BG641900 Rh2BG642000 Rh2BG643800 Rh2BG644200 Rh2BG644700 Rh2BG645400 Rh2BG649800 Rh2CG610100 Rh2CG610200 Rh2CG610900 Rh2CG611000 Rh2CG611100 Rh2CG611800 Rh2CG612100 Rh2CG612300 Rh2CG612400 Rh2DG357300 Rh2DG652600 Rh2DG652800 Rh2DG652900 Rh2DG653100 Rh2DG658100 Rh2DG659200 Rh2DG659300 Rh2DG659800 Rh2DG660100 Rh2DG660300 Rh2DG660400 Rh3AG273000 Rh3DG210900 Rh4AG004400 Rh4AG104800 Rh4AG105200 Rh4AG433400 Rh5AG430100 Rh5BG445500 Rh6AG494800 Rh6DG386400 Rh7AG193900 Rh7CG200400
rosa_wichuraiana Rw2G052220 Rw2G052280 Rw2G052290 Rw2G052320 Rw2G052330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1296
Acc65I GGTACC 1 cut(s) 1178
AccB1I GGYRCC 2 cut(s) 1178, 1801
AccII CGCG 3 cut(s) 632, 760, 803
AciI CCGC 9 cut(s) 502, 600, 627, 630, 632, 635, 758, 803, 1404
AclWI GGATC 4 cut(s) 884, 1020, 1452, 1703
AcoI YGGCCR 3 cut(s) 750, 784, 804
AcsI RAATTY 4 cut(s) 167, 775, 1165, 1620
AcuI CTGAAG 1 cut(s) 1533
AcyI GRCGYC 1 cut(s) 1816
AdeI CACNNNGTG 1 cut(s) 12
AfaI GTAC 6 cut(s) 35, 204, 251, 1180, 1524, 1668
AfiI CCNNNNNNNGG 3 cut(s) 517, 609, 1718
AflII CTTAAG 2 cut(s) 1468, 1714
AflIII ACRYGT 1 cut(s) 205
AgeI ACCGGT 1 cut(s) 870
AgsI TTSAA 9 cut(s) 415, 575, 851, 935, 960, 1199, 1640, 1706, 1840
AjiI CACGTC 1 cut(s) 967
AjnI CCWGG 2 cut(s) 1076, 1173
AluBI AGCT 6 cut(s) 409, 418, 837, 1652, 1658, 1781
AluI AGCT 6 cut(s) 409, 418, 837, 1652, 1658, 1781
Alw21I GWGCWC 1 cut(s) 1315
Alw26I GTCTC 4 cut(s) 515, 656, 806, 1375
AlwI GGATC 4 cut(s) 884, 1020, 1452, 1703
Ama87I CYCGRG 1 cut(s) 857
AoxI GGCC 3 cut(s) 750, 784, 804
ApeKI GCWGC 3 cut(s) 373, 406, 710
ApoI RAATTY 4 cut(s) 167, 775, 1165, 1620
ArsI GACNNNNNNTTYG 2 cut(s) 1721, 1753
AsiGI ACCGGT 1 cut(s) 870
Asp700I GAANNNNTTC 1 cut(s) 779
Asp718I GGTACC 1 cut(s) 1178
AspLEI GCGC 3 cut(s) 228, 378, 1297
AspS9I GGNCC 1 cut(s) 1528
AsuC2I CCSGG 2 cut(s) 788, 924
AsuHPI GGTGA 3 cut(s) 448, 1265, 1496
AvaI CYCGRG 1 cut(s) 857
AvaII GGWCC 1 cut(s) 1528
AxyI CCTNAGG 1 cut(s) 221
BaeGI GKGCMC 1 cut(s) 8
BalI TGGCCA 1 cut(s) 752
BanI GGYRCC 2 cut(s) 1178, 1801
BanII GRGCYC 1 cut(s) 199
BarI GAAGNNNNNNTAC 4 cut(s) 1506, 1538, 1620, 1652
BauI CACGAG 1 cut(s) 367
BbsI GAAGAC 2 cut(s) 735, 1819
Bbv12I GWGCWC 1 cut(s) 1315
BbvCI CCTCAGC 2 cut(s) 305, 833
BbvI GCAGC 3 cut(s) 385, 418, 697
BceAI ACGGC 1 cut(s) 708
BcgI CGANNNNNNTGC 2 cut(s) 1578, 1612
BciT130I CCWGG 2 cut(s) 1078, 1175
BclI TGATCA 1 cut(s) 1429
BcnI CCSGG 2 cut(s) 788, 924
BcoDI GTCTC 4 cut(s) 515, 656, 806, 1375
BfaI CTAG 3 cut(s) 765, 828, 1809
BfmI CTRYAG 2 cut(s) 1118, 1587
BfrI CTTAAG 2 cut(s) 1468, 1714
BglII AGATCT 1 cut(s) 1830
BisI GCNGC 7 cut(s) 374, 407, 630, 633, 711, 758, 804
BlsI GCNGC 7 cut(s) 375, 408, 631, 634, 712, 759, 805
Bme1390I CCNGG 4 cut(s) 788, 924, 1078, 1175
Bme18I GGWCC 1 cut(s) 1528
BmeT110I CYCGRG 1 cut(s) 857
BmgBI CACGTC 1 cut(s) 967
BmgT120I GGNCC 1 cut(s) 1528
BmiI GGNNCC 4 cut(s) 1075, 1180, 1530, 1803
BmrFI CCNGG 4 cut(s) 788, 924, 1078, 1175
BmsI GCATC 4 cut(s) 1192, 1534, 1600, 1783
BoxI GACNNNNGTC 1 cut(s) 143
BpiI GAAGAC 2 cut(s) 735, 1819
BplI GAGNNNNNCTC 2 cut(s) 1357, 1389
Bpu10I CCTNAGC 2 cut(s) 305, 833
BpuEI CTTGAG 1 cut(s) 1805
BpuMI CCSGG 2 cut(s) 788, 924
Bsa29I ATCGAT 1 cut(s) 1456
BsaHI GRCGYC 1 cut(s) 1816
BsaI GGTCTC 2 cut(s) 656, 806
BsaJI CCNNGG 7 cut(s) 53, 630, 807, 856, 1173, 1174, 1579
BsaWI WCCGGW 3 cut(s) 433, 703, 870
BsaXI ACNNNNNCTCC 2 cut(s) 682, 712
Bsc4I CCNNNNNNNGG 3 cut(s) 517, 609, 1718
Bse118I RCCGGY 2 cut(s) 768, 870
Bse1I ACTGG 4 cut(s) 65, 1049, 1072, 1614
Bse21I CCTNAGG 1 cut(s) 221
Bse3DI GCAATG 1 cut(s) 671
BseBI CCWGG 2 cut(s) 1078, 1175
BseCI ATCGAT 1 cut(s) 1456
BseDI CCNNGG 7 cut(s) 53, 630, 807, 856, 1173, 1174, 1579
BseGI GGATG 3 cut(s) 149, 487, 495
BseLI CCNNNNNNNGG 3 cut(s) 517, 609, 1718
BseMI GCAATG 1 cut(s) 671
BseMII CTCAG 6 cut(s) 319, 446, 847, 1223, 1388, 1818
BseNI ACTGG 4 cut(s) 65, 1049, 1072, 1614
BseRI GAGGAG 3 cut(s) 610, 653, 690
BseSI GKGCMC 1 cut(s) 8
BseX3I CGGCCG 1 cut(s) 784
BseXI GCAGC 3 cut(s) 385, 418, 697
BseYI CCCAGC 1 cut(s) 714
Bsh1236I CGCG 3 cut(s) 632, 760, 803
Bsh1285I CGRYCG 1 cut(s) 787
BshFI GGCC 3 cut(s) 752, 786, 806
BshNI GGYRCC 2 cut(s) 1178, 1801
BshTI ACCGGT 1 cut(s) 870
BshVI ATCGAT 1 cut(s) 1456
BsiEI CGRYCG 1 cut(s) 787
BsiHKAI GWGCWC 1 cut(s) 1315
BsiHKCI CYCGRG 1 cut(s) 857
BsiSI CCGG 8 cut(s) 434, 610, 704, 769, 787, 871, 923, 970
BslFI GGGAC 1 cut(s) 71
BslI CCNNNNNNNGG 3 cut(s) 517, 609, 1718
BsmAI GTCTC 4 cut(s) 515, 656, 806, 1375
BsmBI CGTCTC 1 cut(s) 1375
BsmFI GGGAC 1 cut(s) 71
BsnI GGCC 3 cut(s) 752, 786, 806
Bso31I GGTCTC 2 cut(s) 656, 806
BsoBI CYCGRG 1 cut(s) 857
Bsp1286I GDGCHC 3 cut(s) 8, 199, 1315
Bsp1407I TGTACA 1 cut(s) 249
Bsp143I GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
Bsp19I CCATGG 1 cut(s) 1579
BspACI CCGC 9 cut(s) 502, 600, 627, 630, 632, 635, 758, 803, 1404
BspANI GGCC 3 cut(s) 752, 786, 806
BspCNI CTCAG 6 cut(s) 318, 447, 846, 1222, 1387, 1819
BspDI ATCGAT 1 cut(s) 1456
BspFNI CGCG 3 cut(s) 632, 760, 803
BspLI GGNNCC 4 cut(s) 1075, 1180, 1530, 1803
BspMAI CTGCAG 2 cut(s) 1122, 1591
BspPI GGATC 4 cut(s) 884, 1020, 1452, 1703
BspQI GCTCTTC 1 cut(s) 261
BspT107I GGYRCC 2 cut(s) 1178, 1801
BspTI CTTAAG 2 cut(s) 1468, 1714
BspTNI GGTCTC 2 cut(s) 656, 806
BsrDI GCAATG 1 cut(s) 671
BsrFI RCCGGY 2 cut(s) 768, 870
BsrGI TGTACA 1 cut(s) 249
BsrI ACTGG 4 cut(s) 65, 1049, 1072, 1614
BssAI RCCGGY 2 cut(s) 768, 870
BssECI CCNNGG 7 cut(s) 53, 630, 807, 856, 1173, 1174, 1579
BssMI GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
BssNI GRCGYC 1 cut(s) 1816
BssSI CACGAG 1 cut(s) 367
BssT1I CCWWGG 2 cut(s) 807, 1579
Bst2BI CACGAG 1 cut(s) 367
Bst2UI CCWGG 2 cut(s) 1078, 1175
Bst4CI ACNGT 2 cut(s) 484, 1452
Bst6I CTCTTC 3 cut(s) 261, 322, 1344
BstACI GRCGYC 1 cut(s) 1816
BstAFI CTTAAG 2 cut(s) 1468, 1714
BstAUI TGTACA 1 cut(s) 249
BstC8I GCNNGC 5 cut(s) 604, 750, 770, 1326, 1849
BstDEI CTNAG 9 cut(s) 221, 305, 455, 468, 833, 1209, 1341, 1374, 1827
BstDSI CCRYGG 2 cut(s) 630, 1579
BstEII GGTNACC 1 cut(s) 1253
BstF5I GGATG 3 cut(s) 149, 487, 495
BstFNI CGCG 3 cut(s) 632, 760, 803
BstHHI GCGC 3 cut(s) 228, 378, 1297
BstKTI GATC 8 cut(s) 879, 994, 1015, 1356, 1432, 1460, 1711, 1833
BstMAI GTCTC 4 cut(s) 515, 656, 806, 1375
BstMBI GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
BstMCI CGRYCG 1 cut(s) 787
BstMWI GCNNNNNNNGC 4 cut(s) 415, 754, 905, 1857
BstNI CCWGG 2 cut(s) 1078, 1175
BstNSI RCATGY 4 cut(s) 209, 326, 1152, 1766
BstPAI GACNNNNGTC 1 cut(s) 143
BstPI GGTNACC 1 cut(s) 1253
BstSCI CCNGG 4 cut(s) 786, 922, 1076, 1173
BstSFI CTRYAG 2 cut(s) 1118, 1587
BstSLI GKGCMC 1 cut(s) 8
BstUI CGCG 3 cut(s) 632, 760, 803
BstV1I GCAGC 3 cut(s) 385, 418, 697
BstV2I GAAGAC 2 cut(s) 735, 1819
BstX2I RGATCY 3 cut(s) 1012, 1708, 1830
BstYI RGATCY 3 cut(s) 1012, 1708, 1830
BstZI CGGCCG 1 cut(s) 784
Bsu15I ATCGAT 1 cut(s) 1456
Bsu36I CCTNAGG 1 cut(s) 221
BsuRI GGCC 3 cut(s) 752, 786, 806
BsuTUI ATCGAT 1 cut(s) 1456
BtgI CCRYGG 2 cut(s) 630, 1579
BtrI CACGTC 1 cut(s) 967
BtsCI GGATG 3 cut(s) 149, 487, 495
BtsIMutI CAGTG 1 cut(s) 1192
Cac8I GCNNGC 5 cut(s) 604, 750, 770, 1326, 1849
CfoI GCGC 3 cut(s) 228, 378, 1297
Cfr10I RCCGGY 2 cut(s) 768, 870
Cfr13I GGNCC 1 cut(s) 1528
Cfr42I CCGCGG 1 cut(s) 633
ClaI ATCGAT 1 cut(s) 1456
CseI GACGC 5 cut(s) 707, 749, 1357, 1693, 1824
Csp6I GTAC 6 cut(s) 34, 203, 250, 1179, 1523, 1667
CspAI ACCGGT 1 cut(s) 870
CviQI GTAC 6 cut(s) 34, 203, 250, 1179, 1523, 1667
DdeI CTNAG 9 cut(s) 221, 305, 455, 468, 833, 1209, 1341, 1374, 1827
DpnI GATC 8 cut(s) 878, 993, 1014, 1355, 1431, 1459, 1710, 1832
DpnII GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
DraIII CACNNNGTG 1 cut(s) 12
EaeI YGGCCR 3 cut(s) 750, 784, 804
EagI CGGCCG 1 cut(s) 784
Eam1104I CTCTTC 3 cut(s) 261, 322, 1344
EarI CTCTTC 3 cut(s) 261, 322, 1344
EciI GGCGGA 2 cut(s) 616, 650
EclXI CGGCCG 1 cut(s) 784
Eco130I CCWWGG 2 cut(s) 807, 1579
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 2 cut(s) 656, 806
Eco47I GGWCC 1 cut(s) 1528
Eco52I CGGCCG 1 cut(s) 784
Eco57I CTGAAG 1 cut(s) 1533
Eco81I CCTNAGG 1 cut(s) 221
Eco88I CYCGRG 1 cut(s) 857
Eco91I GGTNACC 1 cut(s) 1253
EcoO109I RGGNCCY 1 cut(s) 1528
EcoO65I GGTNACC 1 cut(s) 1253
EcoRI GAATTC 1 cut(s) 775
EcoRII CCWGG 2 cut(s) 1076, 1173
EcoT14I CCWWGG 2 cut(s) 807, 1579
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 807, 1579
Esp3I CGTCTC 1 cut(s) 1375
FalI AAGNNNNNCTT 2 cut(s) 1373, 1405
FaqI GGGAC 1 cut(s) 71
FauI CCCGC 1 cut(s) 1397
FbaI TGATCA 1 cut(s) 1429
Fnu4HI GCNGC 7 cut(s) 374, 407, 630, 633, 711, 758, 804
FokI GGATG 3 cut(s) 136, 474, 482
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 7 cut(s) 374, 407, 630, 633, 711, 758, 804
FspAI RTGCGCAY 1 cut(s) 1296
FspBI CTAG 3 cut(s) 765, 828, 1809
FspI TGCGCA 1 cut(s) 1296
GlaI GCGC 3 cut(s) 227, 377, 1296
GluI GCNGC 7 cut(s) 374, 407, 630, 633, 711, 758, 804
GsaI CCCAGC 1 cut(s) 718
HaeIII GGCC 3 cut(s) 752, 786, 806
HapII CCGG 8 cut(s) 434, 610, 704, 769, 787, 871, 923, 970
HgaI GACGC 5 cut(s) 707, 749, 1357, 1693, 1824
HhaI GCGC 3 cut(s) 228, 378, 1297
Hin1I GRCGYC 1 cut(s) 1816
Hin6I GCGC 3 cut(s) 226, 376, 1295
HinP1I GCGC 3 cut(s) 226, 376, 1295
HinfI GANTC 7 cut(s) 178, 287, 581, 593, 1266, 1337, 1490
HpaII CCGG 8 cut(s) 434, 610, 704, 769, 787, 871, 923, 970
HphI GGTGA 3 cut(s) 448, 1265, 1496
Hpy166II GTNNAC 3 cut(s) 85, 465, 1448
Hpy188I TCNGA 5 cut(s) 445, 456, 588, 1377, 1609
Hpy188III TCNNGA 6 cut(s) 541, 688, 1511, 1706, 1784, 1826
Hpy8I GTNNAC 3 cut(s) 85, 465, 1448
Hpy99I CGWCG 1 cut(s) 723
HpyAV CCTTC 4 cut(s) 857, 1339, 1475, 1504
HpyCH4III ACNGT 2 cut(s) 484, 1452
HpyCH4IV ACGT 1 cut(s) 966
HpyCH4V TGCA 5 cut(s) 79, 941, 1120, 1230, 1589
HpyF10VI GCNNNNNNNGC 4 cut(s) 415, 754, 905, 1857
HpyF3I CTNAG 9 cut(s) 221, 305, 455, 468, 833, 1209, 1341, 1374, 1827
HpySE526I ACGT 1 cut(s) 966
Hsp92I GRCGYC 1 cut(s) 1816
HspAI GCGC 3 cut(s) 226, 376, 1295
KpnI GGTACC 1 cut(s) 1182
KroI GCCGGC 1 cut(s) 768
KroNI GCCGGC 1 cut(s) 770
Ksp22I TGATCA 1 cut(s) 1429
KspI CCGCGG 1 cut(s) 633
Kzo9I GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
LguI GCTCTTC 1 cut(s) 261
LmnI GCTCC 6 cut(s) 436, 849, 1073, 1321, 1365, 1649
Lsp1109I GCAGC 3 cut(s) 385, 418, 697
LweI GCATC 4 cut(s) 1192, 1534, 1600, 1783
MaeI CTAG 3 cut(s) 765, 828, 1809
MaeII ACGT 1 cut(s) 966
MaeIII GTNAC 6 cut(s) 145, 436, 797, 912, 1063, 1253
MalI GATC 8 cut(s) 878, 993, 1014, 1355, 1431, 1459, 1710, 1832
MboI GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
MflI RGATCY 3 cut(s) 1012, 1708, 1830
MhlI GDGCHC 3 cut(s) 8, 199, 1315
MlsI TGGCCA 1 cut(s) 752
MluCI AATT 9 cut(s) 167, 564, 570, 775, 1165, 1411, 1420, 1502, 1620
MluNI TGGCCA 1 cut(s) 752
MlyI GAGTC 2 cut(s) 296, 587
MmeI TCCRAC 1 cut(s) 990
Mox20I TGGCCA 1 cut(s) 752
MroNI GCCGGC 1 cut(s) 768
MroXI GAANNNNTTC 1 cut(s) 779
MscI TGGCCA 1 cut(s) 752
MseI TTAA 4 cut(s) 554, 1419, 1469, 1715
MslI CAYNNNNRTG 3 cut(s) 456, 1142, 1767
Msp20I TGGCCA 1 cut(s) 752
MspA1I CMGCKG 1 cut(s) 632
MspCI CTTAAG 2 cut(s) 1468, 1714
MspI CCGG 8 cut(s) 434, 610, 704, 769, 787, 871, 923, 970
MspR9I CCNGG 4 cut(s) 788, 924, 1078, 1175
MvaI CCWGG 2 cut(s) 1078, 1175
MvnI CGCG 3 cut(s) 632, 760, 803
MwoI GCNNNNNNNGC 4 cut(s) 415, 754, 905, 1857
NaeI GCCGGC 1 cut(s) 770
NciI CCSGG 2 cut(s) 788, 924
NcoI CCATGG 1 cut(s) 1579
NdeII GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
NgoMIV GCCGGC 1 cut(s) 768
NlaIV GGNNCC 4 cut(s) 1075, 1180, 1530, 1803
NmeAIII GCCGAG 2 cut(s) 352, 714
NmuCI GTSAC 4 cut(s) 145, 436, 797, 1253
NsbI TGCGCA 1 cut(s) 1296
NspI RCATGY 4 cut(s) 209, 326, 1152, 1766
PasI CCCWGGG 1 cut(s) 1174
PciI ACATGT 1 cut(s) 205
PciSI GCTCTTC 1 cut(s) 261
PdiI GCCGGC 1 cut(s) 770
PdmI GAANNNNTTC 1 cut(s) 779
PfeI GAWTC 5 cut(s) 178, 581, 1266, 1337, 1490
PinAI ACCGGT 1 cut(s) 870
PkrI GCNGC 7 cut(s) 375, 408, 631, 634, 712, 759, 805
PleI GAGTC 2 cut(s) 295, 587
PpsI GAGTC 2 cut(s) 295, 587
PpuMI RGGWCCY 1 cut(s) 1528
PscI ACATGT 1 cut(s) 205
PshAI GACNNNNGTC 1 cut(s) 143
Psp5II RGGWCCY 1 cut(s) 1528
Psp6I CCWGG 2 cut(s) 1076, 1173
PspEI GGTNACC 1 cut(s) 1253
PspFI CCCAGC 1 cut(s) 714
PspGI CCWGG 2 cut(s) 1076, 1173
PspN4I GGNNCC 4 cut(s) 1075, 1180, 1530, 1803
PspPI GGNCC 1 cut(s) 1528
PspPPI RGGWCCY 1 cut(s) 1528
PstI CTGCAG 2 cut(s) 1122, 1591
PsuI RGATCY 3 cut(s) 1012, 1708, 1830
RsaI GTAC 6 cut(s) 35, 204, 251, 1180, 1524, 1668
RsaNI GTAC 6 cut(s) 34, 203, 250, 1179, 1523, 1667
RseI CAYNNNNRTG 3 cut(s) 456, 1142, 1767
SacII CCGCGG 1 cut(s) 633
SapI GCTCTTC 1 cut(s) 261
SaqAI TTAA 4 cut(s) 554, 1419, 1469, 1715
SatI GCNGC 7 cut(s) 374, 407, 630, 633, 711, 758, 804
Sau3AI GATC 8 cut(s) 876, 991, 1012, 1353, 1429, 1457, 1708, 1830
Sau96I GGNCC 1 cut(s) 1528
SchI GAGTC 2 cut(s) 296, 587
ScrFI CCNGG 4 cut(s) 788, 924, 1078, 1175
SduI GDGCHC 3 cut(s) 8, 199, 1315
SfaNI GCATC 4 cut(s) 1192, 1534, 1600, 1783
SfcI CTRYAG 2 cut(s) 1118, 1587
Sfr303I CCGCGG 1 cut(s) 633
SgrBI CCGCGG 1 cut(s) 633
SinI GGWCC 1 cut(s) 1528
SmiMI CAYNNNNRTG 3 cut(s) 456, 1142, 1767
SmlI CTYRAG 3 cut(s) 1468, 1714, 1784
SmoI CTYRAG 3 cut(s) 1468, 1714, 1784
Sse9I AATT 9 cut(s) 167, 564, 570, 775, 1165, 1411, 1420, 1502, 1620
SsiI CCGC 9 cut(s) 502, 600, 627, 630, 632, 635, 758, 803, 1404
SspMI CTAG 3 cut(s) 765, 828, 1809
StyD4I CCNGG 4 cut(s) 786, 922, 1076, 1173
StyI CCWWGG 2 cut(s) 807, 1579
TaaI ACNGT 2 cut(s) 484, 1452
TaiI ACGT 1 cut(s) 969
TaqI TCGA 4 cut(s) 285, 579, 1456, 1598
TaqII GACCGA 1 cut(s) 81
TasI AATT 9 cut(s) 167, 564, 570, 775, 1165, 1411, 1420, 1502, 1620
TatI WGTACW 3 cut(s) 33, 249, 1522
TauI GCSGC 4 cut(s) 632, 635, 760, 806
TfiI GAWTC 5 cut(s) 178, 581, 1266, 1337, 1490
Tru1I TTAA 4 cut(s) 554, 1419, 1469, 1715
Tru9I TTAA 4 cut(s) 554, 1419, 1469, 1715
TscAI CASTG 1 cut(s) 1192
TseFI GTSAC 4 cut(s) 145, 436, 797, 1253
TseI GCWGC 3 cut(s) 373, 406, 710
Tsp45I GTSAC 4 cut(s) 145, 436, 797, 1253
TspDTI ATGAA 2 cut(s) 476, 484
TspRI CASTG 1 cut(s) 1192
Vha464I CTTAAG 2 cut(s) 1468, 1714
VpaK11BI GGWCC 1 cut(s) 1528
XapI RAATTY 4 cut(s) 167, 775, 1165, 1620
XceI RCATGY 4 cut(s) 209, 326, 1152, 1766
XcmI CCANNNNNNNNNTGG 1 cut(s) 1189
XmnI GAANNNNTTC 1 cut(s) 779
XspI CTAG 3 cut(s) 765, 828, 1809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.