Rh4CG152800

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000415
Physical Location & Seq
Forward (+)
33688885 .. 33695179
6295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG152800.1

Sequence Viewer

Length: 1548 bp
ATGTTGAAAGAGTACTTGGCACAGAAGATTGAGTGTTGGAATGATGAAGTTTATGGTCAAGGATTCATAAATGCTATGCGTGCTATTGAAATAGTTGGATTCAAAACTACGGTGGATCATATCGTCAAAGATGGAACTCTCCCTGTGGTTCCACCGGTTGCCCCGGTTGTGATGGGGAAGAAGAAGAAGACCACCACCACCACCACTGAGTTAACGAGGAAGAAGACCACCTGTGCTCCAATAACTGAGCTGTTATGGAAGGCGACTAGCAGCACAACTAAATCATTATGGAAGGCCACAGCTGCAACAATTACCAACTTATTATGGAAGAGCTGCAATCAAAATCAAAGGTTACTTGCACATGCAAAGGTCGAATCTGTAAAATCAAAGGAAGTGGCTGAACAGAGGATGCTCCTGAAGAAAAGCTGGTTTTCATTTAGATGGCGTACACCTGATGAATCTAATGATGATACTTCTGAGGGATCACAGTCACCAGAAGAAAGACTGACTGAAGAGGAGTGGCAAGCAATTAATAAGTTACTAAGTTACCAGCCAGATGAAACATTGGCATCTCACTCAGGAAAGGACATGCCGAATATGATCCGGTTTATGATTCTATGGTCTGTATGCACCGGAAGGCTCGCTTGCTCAAGCGTATCTAGTGAGCAGAAGGCAAATGCACTGGCCGCTAGCTTTGTATACCATCCAGTTGGAGAGAATGTTGATCGGAGGCTTTCAGCTACCATTTCACCTTGTCATGTCACGGTTTTGATGGAAAGCTGCGATCGCTTTTTGGATTTTGTGAAAAGGAGTAATGCAGTTAGTCCTACTGTTACATTGGAAACGACAACTGCTTTGCAGATGCAGATTGAGAAAGTGACTCATAGAGCACAAGAGCAATTTCAAATGGTATTAGAAGAACAAAGCAGATTTGCCCTTGATATTGATTTGGATGCTCCAAAAGTAAGAATTCCTATCAGAACCAAGGGCTCTTCCAAATGTGATAGCCATTTTCTATTGGATCTTGGTCATTTCACCCTGCAAACGAAGGATACTCAGCATGATAAACAGAAGAAGAACATGTATTCTCGTTTTTTTATAACTGGAAGAGATATTGCTGCATTTTTTATGGATTGTGGTTCCGATTGCCAAATTCGCACTTTGGAATCACCTGATTCTGATAACCACCCACCGGTTACCCTGGAAACTGTTGACAATTTCTATTCTCTCATAGATAGGTGTGGAATGGCTCCACTTGTTGATCAGATCAGAGTACCTCACCCAAGTTACCTCCAGCTGTTGATAATTTTCAAGCAGAACGTGCCCCATGGAGTCCTGCAGATCTTTTACACGGATGCTAGAATTTTAGTATGGAAGGGGATTGGCAATTCTGTGGCTACATGGCAACCTTGTTTTCTTGTGTTGTCGGGGACAAATATTTGTGTTTTTGGAATCCGAGAAGTCGCAGACTTATCAGCGATACTCCAGCATGGCTGGTGGACAAGGGGATGGACACTCAAAAGGCTCTGGAGTCTTCTAGTAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 Chorein_N Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

515

Amino Acids

58.34

Weight (kDa)

8.32

Isoelectric Point (pI)

45.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 220 - 358 4.3e-08 VPS13-like family N-terminal region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000415)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g17790 FvH4_2g20000 FvH4_5g06730 FvH4_5g06800 FvH4_5g06820 FvH4_6g04440 FvH4_6g04540 FvH4_6g34210
malus_domestica MD10G1023300.v1.1 MD14G1198500.v1.1
prunus_persica Prupe.2G100600_v2.0.a1 Prupe.8G205400_v2.0.a1 Prupe.8G205500_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0321451 RchiOBHm_Chr2g0160021 RchiOBHm_Chr4g0407711 RchiOBHm_Chr4g0407721 RchiOBHm_Chr4g0407751 RchiOBHm_Chr4g0407761 RchiOBHm_Chr6g0282811 RchiOBHm_Chr6g0285651 RchiOBHm_Chr6g0285661 RchiOBHm_Chr6g0285691 RchiOBHm_Chr6g0285701 RchiOBHm_Chr7g0191701
rosa_laevigata RLG00000001989 RLG00000003825 RLG00000004431 RLG00000012616 RLG00000012797 RLG00000012866 RLG00000015356 RLG00000021192 RLG00000025443
rosa_multiflora Rmu_sc0000600.1_g000050 Rmu_sc0000600.1_g000051 Rmu_sc0000600.1_g000053 Rmu_sc0000600.1_g000054 Rmu_sc0001123.1_g000019 Rmu_sc0001123.1_g000023 Rmu_sc0001521.1_g000015 Rmu_sc0002023.1_g000017
rosa_roxburghii Rroxscaffold_157G00438540 Rroxscaffold_2G00090090 Rroxscaffold_3G00263620 Rroxscaffold_7G00182850 Rroxscaffold_7G00185190 Rroxscaffold_7G00186010 Rroxscaffold_7G00215810
rosa_rugosa Rorug02G0479800 Rorug03G0030400 Rorug03G0077500 Rorug04G0221600 Rorug06G0006300 Rorug06G0157700 Rorug06G0176400 Rorug06G0511100 Rorug07G0052100 Rorug07G0220500
rosa_samantha Rh2AG546400 Rh2BG559800 Rh2CG529800 Rh2DG568400 Rh2DG568500 Rh3BG143100 Rh3DG144300 Rh4AG146200 Rh4AG146300 Rh4BG153900 Rh4CG152800 Rh6AG024300 Rh6AG262900 Rh6AG270400 Rh6AG288000 Rh6BG265800 Rh6BG272000 Rh6BG289500 Rh6CG016700 Rh6CG265100 Rh6CG272600 Rh6CG272700 Rh6CG290500 Rh6CG290700 Rh6DG017800 Rh6DG257600 Rh6DG265800 Rh6DG283200 Rh7AG119900 Rh7AG120400 Rh7BG122400 Rh7BG178300 Rh7CG125000 Rh7CG125100 Rh7DG123200 Rh7DG123500 Rh7DG123600
rosa_wichuraiana Rw4G011890 Rw4G011910 Rw4G011920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1100
AccI GTMKAC 1 cut(s) 699
AciI CCGC 1 cut(s) 687
AclWI GGATC 4 cut(s) 123, 490, 595, 1029
AcoI YGGCCR 1 cut(s) 684
AcsI RAATTY 3 cut(s) 969, 1152, 1362
AcuI CTGAAG 2 cut(s) 437, 531
AfaI GTAC 3 cut(s) 14, 448, 1275
AfiI CCNNNNNNNGG 1 cut(s) 1192
AflIII ACRYGT 1 cut(s) 1080
AgeI ACCGGT 2 cut(s) 154, 1192
AgsI TTSAA 5 cut(s) 7, 89, 103, 905, 1312
AjnI CCWGG 1 cut(s) 1200
AjuI GAANNNNNNNTTGG 1 cut(s) 31
AluBI AGCT 9 cut(s) 250, 302, 333, 426, 693, 740, 780, 1297, 1544
AluI AGCT 9 cut(s) 250, 302, 333, 426, 693, 740, 780, 1297, 1544
Alw21I GWGCWC 2 cut(s) 238, 892
AlwI GGATC 4 cut(s) 123, 490, 595, 1029
AoxI GGCC 2 cut(s) 294, 684
ApeKI GCWGC 5 cut(s) 270, 302, 333, 780, 1118
ApoI RAATTY 3 cut(s) 969, 1152, 1362
ArsI GACNNNNNNTTYG 2 cut(s) 838, 870
AseI ATTAAT 1 cut(s) 531
AsiGI ACCGGT 2 cut(s) 154, 1192
AsiSI GCGATCGC 1 cut(s) 787
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 5 cut(s) 483, 741, 1027, 1161, 1271
AsuNHI GCTAGC 1 cut(s) 689
BaeGI GKGCMC 1 cut(s) 1326
BanII GRGCYC 1 cut(s) 992
BbsI GAAGAC 3 cut(s) 194, 230, 1526
Bbv12I GWGCWC 2 cut(s) 238, 892
BbvI GCAGC 5 cut(s) 282, 289, 320, 767, 1105
BccI CCATC 6 cut(s) 125, 166, 435, 711, 766, 1503
BciT130I CCWGG 1 cut(s) 1202
BciVI GTATCC 1 cut(s) 1045
BclI TGATCA 1 cut(s) 1261
BcnI CCSGG 1 cut(s) 164
BfaI CTAG 5 cut(s) 267, 660, 690, 1359, 1538
BfmI CTRYAG 1 cut(s) 1337
BfuI GTATCC 1 cut(s) 1045
BglII AGATCT 1 cut(s) 1341
BisI GCNGC 6 cut(s) 271, 303, 334, 687, 781, 1119
BlsI GCNGC 6 cut(s) 272, 304, 335, 688, 782, 1120
BmcAI AGTACT 1 cut(s) 14
Bme1390I CCNGG 2 cut(s) 164, 1202
BmiI GGNNCC 3 cut(s) 150, 1141, 1251
BmrFI CCNGG 2 cut(s) 164, 1202
BmsI GCATC 5 cut(s) 399, 578, 852, 943, 1345
BmtI GCTAGC 1 cut(s) 693
BpiI GAAGAC 3 cut(s) 194, 230, 1526
BpmI CTGGAG 2 cut(s) 1277, 1469
BpuEI CTTGAG 1 cut(s) 634
BpuMI CCSGG 1 cut(s) 164
BsaJI CCNNGG 4 cut(s) 162, 984, 1200, 1327
BsaWI WCCGGW 4 cut(s) 154, 603, 632, 1192
BsaXI ACNNNNNCTCC 4 cut(s) 220, 250, 705, 735
Bsc4I CCNNNNNNNGG 1 cut(s) 1192
Bse118I RCCGGY 2 cut(s) 154, 1192
Bse1I ACTGG 3 cut(s) 687, 707, 1108
BseBI CCWGG 1 cut(s) 1202
BseDI CCNNGG 4 cut(s) 162, 984, 1200, 1327
BseGI GGATG 5 cut(s) 414, 703, 958, 1360, 1514
BseLI CCNNNNNNNGG 1 cut(s) 1192
BseMII CTCAG 5 cut(s) 198, 237, 468, 591, 1070
BseNI ACTGG 3 cut(s) 687, 707, 1108
BseRI GAGGAG 1 cut(s) 530
BseSI GKGCMC 1 cut(s) 1326
BseXI GCAGC 5 cut(s) 282, 289, 320, 767, 1105
Bsh1285I CGRYCG 1 cut(s) 787
BshFI GGCC 2 cut(s) 296, 686
BshTI ACCGGT 2 cut(s) 154, 1192
BsiEI CGRYCG 1 cut(s) 787
BsiHKAI GWGCWC 2 cut(s) 238, 892
BsiSI CCGG 5 cut(s) 155, 164, 604, 633, 1193
BslFI GGGAC 1 cut(s) 1444
BslI CCNNNNNNNGG 1 cut(s) 1192
BsmFI GGGAC 1 cut(s) 1444
BsnI GGCC 2 cut(s) 296, 686
Bsp1286I GDGCHC 4 cut(s) 238, 892, 992, 1326
Bsp143I GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
Bsp19I CCATGG 1 cut(s) 1327
BspACI CCGC 1 cut(s) 687
BspANI GGCC 2 cut(s) 296, 686
BspCNI CTCAG 5 cut(s) 199, 238, 469, 590, 1069
BspLI GGNNCC 3 cut(s) 150, 1141, 1251
BspMAI CTGCAG 1 cut(s) 1341
BspOI GCTAGC 1 cut(s) 693
BspPI GGATC 4 cut(s) 123, 490, 595, 1029
BspQI GCTCTTC 2 cut(s) 323, 997
BsrFI RCCGGY 2 cut(s) 154, 1192
BsrI ACTGG 3 cut(s) 687, 707, 1108
BssAI RCCGGY 2 cut(s) 154, 1192
BssECI CCNNGG 4 cut(s) 162, 984, 1200, 1327
BssMI GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
BssNAI GTATAC 1 cut(s) 700
BssT1I CCWWGG 2 cut(s) 984, 1327
Bst1107I GTATAC 1 cut(s) 700
Bst2UI CCWGG 1 cut(s) 1202
Bst4CI ACNGT 5 cut(s) 112, 489, 766, 832, 1210
Bst6I CTCTTC 4 cut(s) 323, 507, 997, 1102
BstAPI GCANNNNNTGC 1 cut(s) 1321
BstC8I GCNNGC 5 cut(s) 81, 525, 642, 646, 691
BstDEI CTNAG 6 cut(s) 207, 246, 477, 542, 577, 1056
BstDSI CCRYGG 1 cut(s) 1327
BstEII GGTNACC 1 cut(s) 1195
BstF5I GGATG 5 cut(s) 414, 703, 958, 1360, 1514
BstKTI GATC 9 cut(s) 118, 485, 603, 727, 787, 1024, 1264, 1269, 1344
BstMBI GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
BstMCI CGRYCG 1 cut(s) 787
BstMWI GCNNNNNNNGC 6 cut(s) 80, 302, 686, 786, 1155, 1321
BstNI CCWGG 1 cut(s) 1202
BstNSI RCATGY 3 cut(s) 365, 592, 1084
BstPI GGTNACC 1 cut(s) 1195
BstSCI CCNGG 2 cut(s) 162, 1200
BstSFI CTRYAG 1 cut(s) 1337
BstSLI GKGCMC 1 cut(s) 1326
BstV1I GCAGC 5 cut(s) 282, 289, 320, 767, 1105
BstV2I GAAGAC 3 cut(s) 194, 230, 1526
BstX2I RGATCY 2 cut(s) 1021, 1341
BstXI CCANNNNNNTGG 1 cut(s) 710
BstYI RGATCY 2 cut(s) 1021, 1341
BstZ17I GTATAC 1 cut(s) 700
BsuI GTATCC 1 cut(s) 1045
BsuRI GGCC 2 cut(s) 296, 686
BtgI CCRYGG 1 cut(s) 1327
BtsCI GGATG 5 cut(s) 414, 703, 958, 1360, 1514
BtsIMutI CAGTG 2 cut(s) 204, 680
Cac8I GCNNGC 5 cut(s) 81, 525, 642, 646, 691
Cfr10I RCCGGY 2 cut(s) 154, 1192
Csp6I GTAC 3 cut(s) 13, 447, 1274
CspAI ACCGGT 2 cut(s) 154, 1192
CspCI CAANNNNNGTGG 2 cut(s) 375, 410
CviAII CATG 8 cut(s) 362, 589, 758, 1061, 1081, 1328, 1401, 1490
CviQI GTAC 3 cut(s) 13, 447, 1274
DdeI CTNAG 6 cut(s) 207, 246, 477, 542, 577, 1056
DpnI GATC 9 cut(s) 117, 484, 602, 726, 786, 1023, 1263, 1268, 1343
DpnII GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
EaeI YGGCCR 1 cut(s) 684
Eam1104I CTCTTC 4 cut(s) 323, 507, 997, 1102
EarI CTCTTC 4 cut(s) 323, 507, 997, 1102
Eco130I CCWWGG 2 cut(s) 984, 1327
Eco24I GRGCYC 1 cut(s) 992
Eco57I CTGAAG 2 cut(s) 437, 531
Eco91I GGTNACC 1 cut(s) 1195
EcoO65I GGTNACC 1 cut(s) 1195
EcoRI GAATTC 1 cut(s) 969
EcoRII CCWGG 1 cut(s) 1200
EcoT14I CCWWGG 2 cut(s) 984, 1327
EcoT38I GRGCYC 1 cut(s) 992
ErhI CCWWGG 2 cut(s) 984, 1327
FaeI CATG 8 cut(s) 365, 592, 761, 1064, 1084, 1331, 1404, 1493
FalI AAGNNNNNCTT 2 cut(s) 628, 660
FaqI GGGAC 1 cut(s) 1444
FatI CATG 8 cut(s) 361, 588, 757, 1060, 1080, 1327, 1400, 1489
FbaI TGATCA 1 cut(s) 1261
FblI GTMKAC 1 cut(s) 699
Fnu4HI GCNGC 6 cut(s) 271, 303, 334, 687, 781, 1119
FokI GGATG 5 cut(s) 421, 690, 965, 1367, 1521
FriOI GRGCYC 1 cut(s) 992
Fsp4HI GCNGC 6 cut(s) 271, 303, 334, 687, 781, 1119
FspBI CTAG 5 cut(s) 267, 660, 690, 1359, 1538
GluI GCNGC 6 cut(s) 271, 303, 334, 687, 781, 1119
GsuI CTGGAG 2 cut(s) 1277, 1469
HaeIII GGCC 2 cut(s) 296, 686
HapII CCGG 5 cut(s) 155, 164, 604, 633, 1193
Hin1II CATG 8 cut(s) 365, 592, 761, 1064, 1084, 1331, 1404, 1493
HincII GTYRAC 2 cut(s) 213, 1213
HindII GTYRAC 2 cut(s) 213, 1213
HpaI GTTAAC 1 cut(s) 213
HpaII CCGG 5 cut(s) 155, 164, 604, 633, 1193
HphI GGTGA 5 cut(s) 483, 741, 1027, 1161, 1271
Hpy166II GTNNAC 5 cut(s) 213, 449, 700, 1213, 1500
Hpy188I TCNGA 8 cut(s) 478, 729, 980, 1144, 1180, 1266, 1271, 1457
Hpy188III TCNNGA 3 cut(s) 415, 579, 1528
Hpy8I GTNNAC 5 cut(s) 213, 449, 700, 1213, 1500
HpyAV CCTTC 6 cut(s) 253, 286, 630, 664, 1042, 1369
HpyCH4III ACNGT 5 cut(s) 112, 489, 766, 832, 1210
HpyCH4IV ACGT 1 cut(s) 1320
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 302, 686, 786, 1155, 1321
HpyF3I CTNAG 6 cut(s) 207, 246, 477, 542, 577, 1056
HpySE526I ACGT 1 cut(s) 1320
Hsp92II CATG 8 cut(s) 365, 592, 761, 1064, 1084, 1331, 1404, 1493
Ksp22I TGATCA 1 cut(s) 1261
KspAI GTTAAC 1 cut(s) 213
Kzo9I GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
LguI GCTCTTC 2 cut(s) 323, 997
LmnI GCTCC 4 cut(s) 241, 417, 961, 1255
Lsp1109I GCAGC 5 cut(s) 282, 289, 320, 767, 1105
LweI GCATC 5 cut(s) 399, 578, 852, 943, 1345
MaeI CTAG 5 cut(s) 267, 660, 690, 1359, 1538
MaeII ACGT 1 cut(s) 1320
MaeIII GTNAC 9 cut(s) 351, 489, 537, 545, 760, 832, 877, 1195, 1286
MalI GATC 9 cut(s) 117, 484, 602, 726, 786, 1023, 1263, 1268, 1343
MboI GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
MflI RGATCY 2 cut(s) 1021, 1341
MhlI GDGCHC 4 cut(s) 238, 892, 992, 1326
MluCI AATT 9 cut(s) 309, 528, 899, 969, 1152, 1216, 1305, 1362, 1387
MlyI GAGTC 3 cut(s) 874, 1341, 1540
MmeI TCCRAC 3 cut(s) 17, 76, 691
MnlI CCTC 7 cut(s) 210, 399, 472, 508, 723, 1287, 1301
MseI TTAA 2 cut(s) 212, 531
MslI CAYNNNNRTG 1 cut(s) 439
MspA1I CMGCKG 2 cut(s) 302, 1297
MspI CCGG 5 cut(s) 155, 164, 604, 633, 1193
MspR9I CCNGG 2 cut(s) 164, 1202
MvaI CCWGG 1 cut(s) 1202
MwoI GCNNNNNNNGC 6 cut(s) 80, 302, 686, 786, 1155, 1321
NciI CCSGG 1 cut(s) 164
NcoI CCATGG 1 cut(s) 1327
NdeII GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
NheI GCTAGC 1 cut(s) 689
NlaIII CATG 8 cut(s) 365, 592, 761, 1064, 1084, 1331, 1404, 1493
NlaIV GGNNCC 3 cut(s) 150, 1141, 1251
NmuCI GTSAC 3 cut(s) 489, 760, 877
NspI RCATGY 3 cut(s) 365, 592, 1084
PciI ACATGT 1 cut(s) 1080
PciSI GCTCTTC 2 cut(s) 323, 997
PfeI GAWTC 8 cut(s) 63, 99, 374, 458, 613, 1166, 1175, 1452
PinAI ACCGGT 2 cut(s) 154, 1192
PkrI GCNGC 6 cut(s) 272, 304, 335, 688, 782, 1120
Ple19I CGATCG 1 cut(s) 787
PleI GAGTC 3 cut(s) 874, 1340, 1539
PpsI GAGTC 3 cut(s) 874, 1340, 1539
PscI ACATGT 1 cut(s) 1080
PshBI ATTAAT 1 cut(s) 531
PsiI TTATAA 1 cut(s) 1100
Psp6I CCWGG 1 cut(s) 1200
PspEI GGTNACC 1 cut(s) 1195
PspGI CCWGG 1 cut(s) 1200
PspN4I GGNNCC 3 cut(s) 150, 1141, 1251
PstI CTGCAG 1 cut(s) 1341
PsuI RGATCY 2 cut(s) 1021, 1341
PvuI CGATCG 1 cut(s) 787
PvuII CAGCTG 2 cut(s) 302, 1297
RgaI GCGATCGC 1 cut(s) 787
RsaI GTAC 3 cut(s) 14, 448, 1275
RsaNI GTAC 3 cut(s) 13, 447, 1274
RseI CAYNNNNRTG 1 cut(s) 439
SapI GCTCTTC 2 cut(s) 323, 997
SaqAI TTAA 2 cut(s) 212, 531
SatI GCNGC 6 cut(s) 271, 303, 334, 687, 781, 1119
Sau3AI GATC 9 cut(s) 115, 482, 600, 724, 784, 1021, 1261, 1266, 1341
ScaI AGTACT 1 cut(s) 14
SchI GAGTC 3 cut(s) 874, 1341, 1540
ScrFI CCNGG 2 cut(s) 164, 1202
SduI GDGCHC 4 cut(s) 238, 892, 992, 1326
SfaAI GCGATCGC 1 cut(s) 787
SfaNI GCATC 5 cut(s) 399, 578, 852, 943, 1345
SfcI CTRYAG 1 cut(s) 1337
SgfI GCGATCGC 1 cut(s) 787
SmiMI CAYNNNNRTG 1 cut(s) 439
SmlI CTYRAG 1 cut(s) 649
SmoI CTYRAG 1 cut(s) 649
Sse9I AATT 9 cut(s) 309, 528, 899, 969, 1152, 1216, 1305, 1362, 1387
SsiI CCGC 1 cut(s) 687
SspI AATATT 1 cut(s) 1438
SspMI CTAG 5 cut(s) 267, 660, 690, 1359, 1538
StyD4I CCNGG 2 cut(s) 162, 1200
StyI CCWWGG 2 cut(s) 984, 1327
TaaI ACNGT 5 cut(s) 112, 489, 766, 832, 1210
TaiI ACGT 1 cut(s) 1323
TaqI TCGA 1 cut(s) 372
TasI AATT 9 cut(s) 309, 528, 899, 969, 1152, 1216, 1305, 1362, 1387
TatI WGTACW 1 cut(s) 12
TauI GCSGC 1 cut(s) 689
TfiI GAWTC 8 cut(s) 63, 99, 374, 458, 613, 1166, 1175, 1452
Tru1I TTAA 2 cut(s) 212, 531
Tru9I TTAA 2 cut(s) 212, 531
TscAI CASTG 2 cut(s) 211, 687
TseFI GTSAC 3 cut(s) 489, 760, 877
TseI GCWGC 5 cut(s) 270, 302, 333, 780, 1118
Tsp45I GTSAC 3 cut(s) 489, 760, 877
TspDTI ATGAA 5 cut(s) 55, 60, 423, 471, 573
TspGWI ACGGA 1 cut(s) 1367
TspRI CASTG 2 cut(s) 211, 687
VspI ATTAAT 1 cut(s) 531
XapI RAATTY 3 cut(s) 969, 1152, 1362
XceI RCATGY 3 cut(s) 365, 592, 1084
XmiI GTMKAC 1 cut(s) 699
XspI CTAG 5 cut(s) 267, 660, 690, 1359, 1538
ZrmI AGTACT 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.