AT3G07610
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000280
Physical Location & Seq
Forward (+)
2425884 .. 2433113
7230 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07610.1

Sequence Viewer

Length: 3084 bp
ATGGATTCTGTGGAGGAAGAAGGTGTTGTTAGGGTTGAAGAAGAGAACGGACGCGGTGGTCTCCGTAGGCATCGGAGGGTTTCTACGAAGCTGGCGAATTACGTAGATCCTCCGACTGACGACGAAGAAGATGGAGGACCCAAGCGAAAGGGCAAAAGGGGTGGAAATAGGGCTCCGAAAAAGACACCGAAGAAAGACGAGGAGATGCAAAAGAACGAAATTGATGAAGCAAACCGAGTCACTGGTCTGGTGAAGGAAAAAAGAGCCGCGACTAAGATTCTGAATCGCAAAGACTCCATTATTGAAGTAGGAGAAGCTTCTGGAAGCATGCCCAAGGAAGTAAAGGGAATTAGGATTGGGAAAAGGAAGGGAGAAATCGATGGTGAGATTCCAACTAAGCCGGGCAAGAAGCCAAAGACTACAGTAGACCCGAGAATCATTGGTTACAGACCGGACAATATGTGCCATCAATGTCAAAAGAGCGATAGGATTGTTGAACGGTGTCAGACCTGCAATAGTAAGCGTTATTGTCATCCATGCTTGGACACTTGGTACCCCCTTATAGCAAAAGAAGATGTTGCCAAGAAATGCATGTTCTGCTCTAGTACTTGCAATTGCAGAGCATGCTTGCGTCTAGATACTAAATTGAAAGGGATAAATTCGAACCTCATAGTCAGCGAGGAAGAAAAGGTCCAAGCCTCTAAGTTTATTCTGCAGAGCCTTCTCCCACATCTGAAAGGAATAAATGATGAACAAGTTGCTGAGAAGGAAGTTGAGGCCAAAATATACGGACTGAAGTTTGAAGAGGTGAGGCCCCAAGACGCTAAAGCTTTCCCTGATGAAAGACTATACTGTGATATCTGCAAGACTTCTATCTATGATCTCCATAGGAATTGCAAGTCCTGTAGTTTTGATATCTGCCTTAGCTGTTGCCTTGAGATCCGCAATGGAAAGGCTCTGGCATGTAAGGAGGATGTGTCTTGGAATTATATTAACCGAGGTTTAGAGTATGAACATGGACAAGAAGGAAAAGTGATTGAAAAGCCGGCGAATAAGCTAGATGATAAGTTGAAAGATAAGCTGGATGGTAAGCCGGATGATAAGCCGAAGGGTAAGCCAAAGGGTAGGCCAAAGGGTAAGCCGGATGATAAGCCGAAGGGTAAACTGAAGGGTAAGCAGGATGATAAACCGGATGATAAGCCAGATGAGAAGCCGGTTAATACAGACCATATGAAGTACCCTTCTCTGTGGAAAGCAAATGAAGCTGGGATCATTACTTGTTGTTGTGGTGCTGGGGAGTTAGTGCTGAAACGACTACTTCCGGATGGTTGGATATCTGAGTTGGTCAACAGAGTTGAAAAAACTGCTGAAGCTGGCGAGCTTTTGAATTTACCTGAAACGGTTTTGGAGCGATGCCCTTGTTCTAACTCTGACAGACATATTGACATAGACAGCTGTAATTTGTTAAAAGCTGCTTGTCGAGAAGGTTCAGAAGACAATTATCTTTACTCTCCAAGTGTATGGGATGTTCAACAAGATGATTTGAAGCATTTTCAGCACCATTGGGTAAAAGGCGAGCCTGTGATTGTGAGAAATGTGCTTGAAGCTACATCTGGTTTAAGCTGGGAACCAATGGTAATGCATCGTGCCTGCCGCCAGATAAGCCATGTCCAGCATGGATCACTTAAGGATGTTGTTGCTGTTGATTGTTTGGACTTCTGTGAGGTAAAAGTTAATCTTCATGAATTTTTTACTGGATACACGGATGGCCGATATGATCGAATGGGTTGGCCACTAGTTCTGAAACTGAAAGATTGGCCTCCAGCTAAAGTCTTCAAAGATAACTTGCCACGTCATGCTGAGGAGTTCTTATGTAGTTTGCCTTTGAAGCATTACACTCATCCGGTTAATGGACCTTTGAATCTCGCTGTCAAGCTTCCCCAAAATTGCTTGAAGCCAGACATGGGACCAAAGACGTACGTTGCTTCTGGATTTGCTCAAGAATTAGGCCGTGGAGATTCTGTTACTAAGCTCCACTGCGACATGTCTGATGCGGTGAATATTTTGACGCACATATCTGAAGTGCCCAATATGCAACCTGGAATTGGAAATCTGAAAAAGAAGCATGCCGAACAAGATCTCAAGGAGCTGTATAGCTCAGTAGCTAACAAGGAGGAAATGATGGAGATTCTTGAAAATTCCAGACAACAAGTCCAAAATGTTGAAACTGATGATGGAGCTCTTTGGGACATTTTCCGTAGAGAAGATATTCCTAAATTAGAAAGTTACATTGAGAAACATCACAAGGAGTTCAGACATCTCTACTGCTGTCCTGTGTCTCAGGTTGTTCATCCTATACATGACCAGAACTTCTATCTGACGCGGTATCATATAATGAAGCTGAAAGAAGAATATGGCATTGAACCTTGGACCTTCAATCAGAAGCTTGGTGATGCTGTTTTGATACCTGTAGGTTGCCCTCATCAAGTTAGAAATTTGAAGTCCTGCAATAAGGTAGCGCTTGACTTCGTCTCACCTGAAAATGTCAGCGAGTGTTTACGCTTGACAAAACAGTATCGTCTACTTCCACCAAATCATTTTGCAAAAGAAGACAAGTTAGGGGTTAAGAAGATGATAGTCCATGCAGTTGATAAAGCTCTCAGAGACTTAAGTGGAGAGAAGTCTCCAGAACCTGAAGAGAAGAAACAAAATATGAGAGGGCCGAAGAAGGGGGCAGCCAAGGCAGTTGCCAAGGCTCTCAAAGACTTATCTCCAAGTGAAAAGAAGTCTTCGGAAGCAGCTGAAGAGGAGATATCAAATGGGATAGTCAATGCAATCGATAAGGGTCTCAAAGACTTACCTCCAAGTGAAGAGAAGTCTTCCGAAGCCAAAGTGGAGATATCAAATGGGATAGTCAGTGCAATGGATAAGGATCTCGAACACATATCTTCAAGCGAAAAGAAGTCTACGGAAGAGGAAGGGGTGAAAAGACCAAATATTGTGAGGACATATGAGCGGAGAAAAAAGCTGGGAAGTGAAGTAACCAACGCATACATTGACAGATTAGAAATGGAGAAGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

1027

Amino Acids

116.25

Weight (kDa)

7.97

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 748 - 843 3.7e-11 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 57
Acc36I ACCTGC 1 cut(s) 518
Acc65I GGTACC 1 cut(s) 552
AccB1I GGYRCC 1 cut(s) 552
AccBSI CCGCTC 1 cut(s) 3016
AccI GTMKAC 3 cut(s) 426, 2581, 2966
AccII CGCG 3 cut(s) 54, 269, 2383
AccIII TCCGGA 1 cut(s) 1321
AciI CCGC 7 cut(s) 54, 267, 943, 1654, 2054, 2383, 3016
AclWI GGATC 5 cut(s) 101, 934, 1277, 1687, 2940
AcoI YGGCCR 2 cut(s) 1768, 1790
AcsI RAATTY 5 cut(s) 658, 1387, 1745, 2197, 2494
AcuI CTGAAG 6 cut(s) 815, 1187, 1389, 2100, 2715, 2823
AfaI GTAC 4 cut(s) 554, 607, 1238, 1979
AfeI AGCGCT 1 cut(s) 2520
AfiI CCNNNNNNNGG 4 cut(s) 1910, 1964, 2105, 2729
AflII CTTAAG 2 cut(s) 1685, 2668
AflIII ACRYGT 1 cut(s) 2043
AhdI GACNNNNNGTC 1 cut(s) 2210
AhlI ACTAGT 1 cut(s) 1795
AjiI CACGTC 1 cut(s) 1853
AjnI CCWGG 1 cut(s) 2098
Alw21I GWGCWC 1 cut(s) 2242
Alw26I GTCTC 6 cut(s) 65, 2343, 2536, 2658, 2688, 2852
AlwI GGATC 5 cut(s) 101, 934, 1277, 1687, 2940
AlwNI CAGNNNCTG 1 cut(s) 2693
Ama87I CYCGRG 1 cut(s) 430
Aor13HI TCCGGA 1 cut(s) 1321
Aor51HI AGCGCT 1 cut(s) 2520
AoxI GGCC 8 cut(s) 777, 812, 1127, 1768, 1790, 1817, 2008, 2720
ApeKI GCWGC 3 cut(s) 1472, 2735, 2798
ApoI RAATTY 5 cut(s) 658, 1387, 1745, 2197, 2494
Asp700I GAANNNNTTC 1 cut(s) 2268
Asp718I GGTACC 1 cut(s) 552
AspLEI GCGC 1 cut(s) 2521
AspS9I GGNCC 7 cut(s) 137, 691, 813, 1913, 1967, 2430, 2720
AsuC2I CCSGG 1 cut(s) 402
AsuHPI GGTGA 7 cut(s) 262, 395, 820, 2068, 2462, 2526, 2995
AsuII TTCGAA 1 cut(s) 662
AvaI CYCGRG 1 cut(s) 430
AvaII GGWCC 5 cut(s) 137, 691, 1913, 1967, 2430
BaeGI GKGCMC 1 cut(s) 2088
BalI TGGCCA 1 cut(s) 1792
BanI GGYRCC 1 cut(s) 552
BanII GRGCYC 2 cut(s) 175, 2242
BbsI GAAGAC 5 cut(s) 1500, 1825, 2616, 2781, 2871
Bbv12I GWGCWC 1 cut(s) 2242
BbvCI CCTCAGC 1 cut(s) 1860
BbvI GCAGC 3 cut(s) 1459, 2747, 2810
BccI CCATC 8 cut(s) 125, 374, 474, 1079, 1319, 1760, 2176, 2228
BceAI ACGGC 1 cut(s) 1995
BciT130I CCWGG 1 cut(s) 2100
BciVI GTATCC 1 cut(s) 1751
BcnI CCSGG 1 cut(s) 402
BcoDI GTCTC 6 cut(s) 65, 2343, 2536, 2658, 2688, 2852
BcuI ACTAGT 1 cut(s) 1795
BfaI CTAG 4 cut(s) 603, 635, 1058, 1796
BfmI CTRYAG 4 cut(s) 420, 713, 904, 2469
BfoI RGCGCY 1 cut(s) 2522
BfrI CTTAAG 2 cut(s) 1685, 2668
BfuAI ACCTGC 1 cut(s) 518
BfuI GTATCC 1 cut(s) 1751
BglII AGATCT 1 cut(s) 2137
BisI GCNGC 5 cut(s) 267, 1473, 1654, 2736, 2799
BlsI GCNGC 5 cut(s) 268, 1474, 1655, 2737, 2800
BmcAI AGTACT 1 cut(s) 607
Bme1390I CCNGG 2 cut(s) 402, 2100
Bme18I GGWCC 5 cut(s) 137, 691, 1913, 1967, 2430
BmeRI GACNNNNNGTC 1 cut(s) 2210
BmeT110I CYCGRG 1 cut(s) 430
BmgBI CACGTC 1 cut(s) 1853
BmgT120I GGNCC 7 cut(s) 137, 691, 813, 1913, 1967, 2430, 2720
BmiI GGNNCC 6 cut(s) 139, 174, 554, 815, 1629, 1968
BmrFI CCNGG 2 cut(s) 402, 2100
BmsI GCATC 6 cut(s) 79, 195, 1403, 1651, 2041, 2443
BpiI GAAGAC 5 cut(s) 1500, 1825, 2616, 2781, 2871
BpmI CTGGAG 2 cut(s) 1806, 2670
Bpu10I CCTNAGC 2 cut(s) 923, 1860
Bpu14I TTCGAA 1 cut(s) 662
BpuEI CTTGAG 3 cut(s) 956, 1983, 2126
BpuMI CCSGG 1 cut(s) 402
Bsa29I ATCGAT 2 cut(s) 378, 2838
BsaAI YACGTR 1 cut(s) 103
BsaBI GATNNNNATC 1 cut(s) 2931
BsaI GGTCTC 2 cut(s) 65, 2852
BsaJI CCNNGG 6 cut(s) 333, 997, 2011, 2426, 2739, 2751
BsaWI WCCGGW 4 cut(s) 451, 1189, 1321, 1903
BsaXI ACNNNNNCTCC 5 cut(s) 962, 992, 2007, 2037, 3065
Bsc4I CCNNNNNNNGG 4 cut(s) 1910, 1964, 2105, 2729
Bse118I RCCGGY 2 cut(s) 1045, 1213
Bse1I ACTGG 2 cut(s) 247, 1759
Bse3DI GCAATG 2 cut(s) 952, 2928
Bse8I GATNNNNATC 1 cut(s) 2931
BseAI TCCGGA 1 cut(s) 1321
BseBI CCWGG 1 cut(s) 2100
BseCI ATCGAT 2 cut(s) 378, 2838
BseDI CCNNGG 6 cut(s) 333, 997, 2011, 2426, 2739, 2751
BseJI GATNNNNATC 1 cut(s) 2931
BseLI CCNNNNNNNGG 4 cut(s) 1910, 1964, 2105, 2729
BseMI GCAATG 2 cut(s) 952, 2928
BseMII CTCAG 6 cut(s) 753, 1329, 1851, 2172, 2354, 2674
BseNI ACTGG 2 cut(s) 247, 1759
BseRI GAGGAG 3 cut(s) 215, 1877, 2822
BseSI GKGCMC 1 cut(s) 2088
BseXI GCAGC 3 cut(s) 1459, 2747, 2810
BseYI CCCAGC 4 cut(s) 1265, 1292, 1623, 3028
Bsh1236I CGCG 3 cut(s) 54, 269, 2383
BshFI GGCC 8 cut(s) 779, 814, 1129, 1770, 1792, 1819, 2010, 2722
BshNI GGYRCC 1 cut(s) 552
BshVI ATCGAT 2 cut(s) 378, 2838
BsiHKAI GWGCWC 1 cut(s) 2242
BsiHKCI CYCGRG 1 cut(s) 430
BsiSI CCGG 9 cut(s) 401, 452, 1046, 1094, 1142, 1190, 1214, 1322, 1904
BsiWI CGTACG 1 cut(s) 1977
BslFI GGGAC 2 cut(s) 1980, 2261
BslI CCNNNNNNNGG 4 cut(s) 1910, 1964, 2105, 2729
BsmAI GTCTC 6 cut(s) 65, 2343, 2536, 2658, 2688, 2852
BsmBI CGTCTC 1 cut(s) 2536
BsmFI GGGAC 2 cut(s) 1980, 2261
BsnI GGCC 8 cut(s) 779, 814, 1129, 1770, 1792, 1819, 2010, 2722
Bso31I GGTCTC 2 cut(s) 65, 2852
BsoBI CYCGRG 1 cut(s) 430
Bsp119I TTCGAA 1 cut(s) 662
Bsp1286I GDGCHC 3 cut(s) 175, 2088, 2242
Bsp13I TCCGGA 1 cut(s) 1321
Bsp143I GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
BspACI CCGC 7 cut(s) 54, 267, 943, 1654, 2054, 2383, 3016
BspANI GGCC 8 cut(s) 779, 814, 1129, 1770, 1792, 1819, 2010, 2722
BspCNI CTCAG 6 cut(s) 754, 1330, 1852, 2171, 2353, 2673
BspDI ATCGAT 2 cut(s) 378, 2838
BspEI TCCGGA 1 cut(s) 1321
BspFNI CGCG 3 cut(s) 54, 269, 2383
BspHI TCATGA 1 cut(s) 1741
BspLI GGNNCC 6 cut(s) 139, 174, 554, 815, 1629, 1968
BspMAI CTGCAG 1 cut(s) 717
BspMI ACCTGC 1 cut(s) 518
BspPI GGATC 5 cut(s) 101, 934, 1277, 1687, 2940
BspT104I TTCGAA 1 cut(s) 662
BspT107I GGYRCC 1 cut(s) 552
BspTI CTTAAG 2 cut(s) 1685, 2668
BspTNI GGTCTC 2 cut(s) 65, 2852
BsrBI CCGCTC 1 cut(s) 3016
BsrDI GCAATG 2 cut(s) 952, 2928
BsrFI RCCGGY 2 cut(s) 1045, 1213
BsrI ACTGG 2 cut(s) 247, 1759
BssAI RCCGGY 2 cut(s) 1045, 1213
BssECI CCNNGG 6 cut(s) 333, 997, 2011, 2426, 2739, 2751
BssMI GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
BssT1I CCWWGG 4 cut(s) 333, 2426, 2739, 2751
Bst2UI CCWGG 1 cut(s) 2100
Bst4CI ACNGT 5 cut(s) 424, 501, 854, 1402, 2574
Bst6I CTCTTC 6 cut(s) 36, 798, 2691, 2799, 2865, 2967
BstAFI CTTAAG 2 cut(s) 1685, 2668
BstAPI GCANNNNNTGC 2 cut(s) 597, 624
BstBAI YACGTR 1 cut(s) 103
BstBI TTCGAA 1 cut(s) 662
BstDSI CCRYGG 1 cut(s) 2011
BstFNI CGCG 3 cut(s) 54, 269, 2383
BstH2I RGCGCY 1 cut(s) 2522
BstHHI GCGC 1 cut(s) 2521
BstKTI GATC 8 cut(s) 109, 883, 942, 1272, 1682, 1780, 2140, 2935
BstMAI GTCTC 6 cut(s) 65, 2343, 2536, 2658, 2688, 2852
BstMBI GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
BstMWI GCNNNNNNNGC 8 cut(s) 597, 624, 1262, 1555, 1662, 1888, 2092, 2741
BstNI CCWGG 1 cut(s) 2100
BstNSI RCATGY 6 cut(s) 331, 595, 627, 966, 2047, 2129
BstSCI CCNGG 2 cut(s) 400, 2098
BstSFI CTRYAG 4 cut(s) 420, 713, 904, 2469
BstSLI GKGCMC 1 cut(s) 2088
BstSNI TACGTA 1 cut(s) 103
BstUI CGCG 3 cut(s) 54, 269, 2383
BstV1I GCAGC 3 cut(s) 1459, 2747, 2810
BstV2I GAAGAC 5 cut(s) 1500, 1825, 2616, 2781, 2871
BstX2I RGATCY 4 cut(s) 106, 939, 2137, 2932
BstXI CCANNNNNNTGG 1 cut(s) 1521
BstYI RGATCY 4 cut(s) 106, 939, 2137, 2932
Bsu15I ATCGAT 2 cut(s) 378, 2838
BsuI GTATCC 1 cut(s) 1751
BsuRI GGCC 8 cut(s) 779, 814, 1129, 1770, 1792, 1819, 2010, 2722
BsuTUI ATCGAT 2 cut(s) 378, 2838
BtgI CCRYGG 1 cut(s) 2011
BtgZI GCGATG 1 cut(s) 1426
BtrI CACGTC 1 cut(s) 1853
BtsI GCAGTG 1 cut(s) 2035
BtsIMutI CAGTG 3 cut(s) 240, 2035, 2923
BveI ACCTGC 1 cut(s) 518
CaiI CAGNNNCTG 1 cut(s) 2693
CciI TCATGA 1 cut(s) 1741
CfoI GCGC 1 cut(s) 2521
Cfr10I RCCGGY 2 cut(s) 1045, 1213
Cfr13I GGNCC 7 cut(s) 137, 691, 813, 1913, 1967, 2430, 2720
ClaI ATCGAT 2 cut(s) 378, 2838
CseI GACGC 5 cut(s) 60, 620, 830, 2077, 2389
Csp6I GTAC 4 cut(s) 553, 606, 1237, 1978
CspCI CAANNNNNGTGG 2 cut(s) 142, 177
CviQI GTAC 4 cut(s) 553, 606, 1237, 1978
DpnI GATC 8 cut(s) 108, 882, 941, 1271, 1681, 1779, 2139, 2934
DpnII GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
DrdI GACNNNNNNGTC 1 cut(s) 57
DriI GACNNNNNGTC 1 cut(s) 2210
DseDI GACNNNNNNGTC 1 cut(s) 57
EaeI YGGCCR 2 cut(s) 1768, 1790
Eam1104I CTCTTC 6 cut(s) 36, 798, 2691, 2799, 2865, 2967
Eam1105I GACNNNNNGTC 1 cut(s) 2210
EarI CTCTTC 6 cut(s) 36, 798, 2691, 2799, 2865, 2967
Ecl136II GAGCTC 1 cut(s) 2240
Eco105I TACGTA 1 cut(s) 103
Eco130I CCWWGG 4 cut(s) 333, 2426, 2739, 2751
Eco24I GRGCYC 2 cut(s) 175, 2242
Eco31I GGTCTC 2 cut(s) 65, 2852
Eco32I GATATC 5 cut(s) 859, 916, 1335, 2814, 2901
Eco47I GGWCC 5 cut(s) 137, 691, 1913, 1967, 2430
Eco47III AGCGCT 1 cut(s) 2520
Eco53kI GAGCTC 1 cut(s) 2240
Eco57I CTGAAG 6 cut(s) 815, 1187, 1389, 2100, 2715, 2823
Eco88I CYCGRG 1 cut(s) 430
EcoICRI GAGCTC 1 cut(s) 2240
EcoO109I RGGNCCY 2 cut(s) 137, 813
EcoRII CCWGG 1 cut(s) 2098
EcoRV GATATC 5 cut(s) 859, 916, 1335, 2814, 2901
EcoT14I CCWWGG 4 cut(s) 333, 2426, 2739, 2751
EcoT22I ATGCAT 2 cut(s) 593, 1644
EcoT38I GRGCYC 2 cut(s) 175, 2242
ErhI CCWWGG 4 cut(s) 333, 2426, 2739, 2751
Esp3I CGTCTC 1 cut(s) 2536
FalI AAGNNNNNCTT 2 cut(s) 1722, 1754
FaqI GGGAC 2 cut(s) 1980, 2261
FauNDI CATATG 2 cut(s) 1230, 3010
FblI GTMKAC 3 cut(s) 426, 2581, 2966
Fnu4HI GCNGC 5 cut(s) 267, 1473, 1654, 2736, 2799
FriOI GRGCYC 2 cut(s) 175, 2242
Fsp4HI GCNGC 5 cut(s) 267, 1473, 1654, 2736, 2799
FspBI CTAG 4 cut(s) 603, 635, 1058, 1796
GlaI GCGC 1 cut(s) 2520
GluI GCNGC 5 cut(s) 267, 1473, 1654, 2736, 2799
GsaI CCCAGC 4 cut(s) 1269, 1296, 1627, 3032
GsuI CTGGAG 2 cut(s) 1806, 2670
HaeII RGCGCY 1 cut(s) 2522
HaeIII GGCC 8 cut(s) 779, 814, 1129, 1770, 1792, 1819, 2010, 2722
HapII CCGG 9 cut(s) 401, 452, 1046, 1094, 1142, 1190, 1214, 1322, 1904
HgaI GACGC 5 cut(s) 60, 620, 830, 2077, 2389
HhaI GCGC 1 cut(s) 2521
Hin6I GCGC 1 cut(s) 2519
HinP1I GCGC 1 cut(s) 2519
HincII GTYRAC 1 cut(s) 1348
HindII GTYRAC 1 cut(s) 1348
HindIII AAGCTT 4 cut(s) 315, 828, 1934, 2444
HpaII CCGG 9 cut(s) 401, 452, 1046, 1094, 1142, 1190, 1214, 1322, 1904
HphI GGTGA 7 cut(s) 262, 395, 820, 2068, 2462, 2526, 2995
Hpy166II GTNNAC 6 cut(s) 427, 1163, 1348, 2558, 2582, 2967
Hpy8I GTNNAC 6 cut(s) 427, 1163, 1348, 2558, 2582, 2967
Hpy99I CGWCG 1 cut(s) 125
HpyCH4III ACNGT 5 cut(s) 424, 501, 854, 1402, 2574
HpyCH4IV ACGT 4 cut(s) 102, 1852, 1976, 1980
HpyF10VI GCNNNNNNNGC 8 cut(s) 597, 624, 1262, 1555, 1662, 1888, 2092, 2741
HpySE526I ACGT 4 cut(s) 102, 1852, 1976, 1980
HspAI GCGC 1 cut(s) 2519
Kpn2I TCCGGA 1 cut(s) 1321
KpnI GGTACC 1 cut(s) 556
KroI GCCGGC 1 cut(s) 1045
KroNI GCCGGC 1 cut(s) 1047
Kzo9I GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
LmnI GCTCC 5 cut(s) 178, 1408, 2037, 2146, 2237
Lsp1109I GCAGC 3 cut(s) 1459, 2747, 2810
LweI GCATC 6 cut(s) 79, 195, 1403, 1651, 2041, 2443
MaeI CTAG 4 cut(s) 603, 635, 1058, 1796
MaeII ACGT 4 cut(s) 102, 1852, 1976, 1980
MaeIII GTNAC 5 cut(s) 238, 443, 2023, 2285, 3040
MalI GATC 8 cut(s) 108, 882, 941, 1271, 1681, 1779, 2139, 2934
MbiI CCGCTC 1 cut(s) 3016
MboI GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
MfeI CAATTG 1 cut(s) 613
MflI RGATCY 4 cut(s) 106, 939, 2137, 2932
MhlI GDGCHC 3 cut(s) 175, 2088, 2242
MlsI TGGCCA 1 cut(s) 1792
MluNI TGGCCA 1 cut(s) 1792
MlyI GAGTC 2 cut(s) 246, 287
MmeI TCCRAC 3 cut(s) 137, 416, 1310
Mox20I TGGCCA 1 cut(s) 1792
Mph1103I ATGCAT 2 cut(s) 593, 1644
MroI TCCGGA 1 cut(s) 1321
MroNI GCCGGC 1 cut(s) 1045
MroXI GAANNNNTTC 1 cut(s) 2268
MscI TGGCCA 1 cut(s) 1792
MseI TTAA 9 cut(s) 993, 1218, 1466, 1619, 1686, 1734, 1908, 2625, 2669
Msp20I TGGCCA 1 cut(s) 1792
MspA1I CMGCKG 2 cut(s) 1455, 2801
MspCI CTTAAG 2 cut(s) 1685, 2668
MspI CCGG 9 cut(s) 401, 452, 1046, 1094, 1142, 1190, 1214, 1322, 1904
MspR9I CCNGG 2 cut(s) 402, 2100
MunI CAATTG 1 cut(s) 613
MvaI CCWGG 1 cut(s) 2100
MvnI CGCG 3 cut(s) 54, 269, 2383
MwoI GCNNNNNNNGC 8 cut(s) 597, 624, 1262, 1555, 1662, 1888, 2092, 2741
NaeI GCCGGC 1 cut(s) 1047
NciI CCSGG 1 cut(s) 402
NdeI CATATG 2 cut(s) 1230, 3010
NdeII GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
NgoMIV GCCGGC 1 cut(s) 1045
NlaIV GGNNCC 6 cut(s) 139, 174, 554, 815, 1629, 1968
NmuCI GTSAC 1 cut(s) 238
NsiI ATGCAT 2 cut(s) 593, 1644
NspI RCATGY 6 cut(s) 331, 595, 627, 966, 2047, 2129
NspV TTCGAA 1 cut(s) 662
PaeI GCATGC 3 cut(s) 331, 627, 2129
PagI TCATGA 1 cut(s) 1741
PciI ACATGT 1 cut(s) 2043
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PdiI GCCGGC 1 cut(s) 1047
PdmI GAANNNNTTC 1 cut(s) 2268
PfeI GAWTC 8 cut(s) 5, 277, 283, 388, 435, 1921, 2018, 2188
Pfl23II CGTACG 1 cut(s) 1977
PflFI GACNNNGTC 1 cut(s) 2528
PkrI GCNGC 5 cut(s) 268, 1474, 1655, 2737, 2800
PleI GAGTC 2 cut(s) 245, 287
PpsI GAGTC 2 cut(s) 245, 287
Ppu21I YACGTR 1 cut(s) 103
PpuMI RGGWCCY 1 cut(s) 137
PscI ACATGT 1 cut(s) 2043
Psp124BI GAGCTC 1 cut(s) 2242
Psp5II RGGWCCY 1 cut(s) 137
Psp6I CCWGG 1 cut(s) 2098
PspFI CCCAGC 4 cut(s) 1265, 1292, 1623, 3028
PspGI CCWGG 1 cut(s) 2098
PspLI CGTACG 1 cut(s) 1977
PspN4I GGNNCC 6 cut(s) 139, 174, 554, 815, 1629, 1968
PspPI GGNCC 7 cut(s) 137, 691, 813, 1913, 1967, 2430, 2720
PspPPI RGGWCCY 1 cut(s) 137
PsrI GAACNNNNNNTAC 2 cut(s) 1512, 1544
PstI CTGCAG 1 cut(s) 717
PstNI CAGNNNCTG 1 cut(s) 2693
PsuI RGATCY 4 cut(s) 106, 939, 2137, 2932
PsyI GACNNNGTC 1 cut(s) 2528
PvuII CAGCTG 2 cut(s) 1455, 2801
RsaI GTAC 4 cut(s) 554, 607, 1238, 1979
RsaNI GTAC 4 cut(s) 553, 606, 1237, 1978
SacI GAGCTC 1 cut(s) 2242
SaqAI TTAA 9 cut(s) 993, 1218, 1466, 1619, 1686, 1734, 1908, 2625, 2669
SatI GCNGC 5 cut(s) 267, 1473, 1654, 2736, 2799
Sau3AI GATC 8 cut(s) 106, 880, 939, 1269, 1679, 1777, 2137, 2932
Sau96I GGNCC 7 cut(s) 137, 691, 813, 1913, 1967, 2430, 2720
ScaI AGTACT 1 cut(s) 607
SchI GAGTC 2 cut(s) 246, 287
ScrFI CCNGG 2 cut(s) 402, 2100
SduI GDGCHC 3 cut(s) 175, 2088, 2242
SfaNI GCATC 6 cut(s) 79, 195, 1403, 1651, 2041, 2443
SfcI CTRYAG 4 cut(s) 420, 713, 904, 2469
SfuI TTCGAA 1 cut(s) 662
SinI GGWCC 5 cut(s) 137, 691, 1913, 1967, 2430
SmlI CTYRAG 5 cut(s) 935, 1685, 1998, 2141, 2668
SmoI CTYRAG 5 cut(s) 935, 1685, 1998, 2141, 2668
SnaBI TACGTA 1 cut(s) 103
SpeI ACTAGT 1 cut(s) 1795
SphI GCATGC 3 cut(s) 331, 627, 2129
SsiI CCGC 7 cut(s) 54, 267, 943, 1654, 2054, 2383, 3016
SspI AATATT 2 cut(s) 2062, 2998
SspMI CTAG 4 cut(s) 603, 635, 1058, 1796
SstI GAGCTC 1 cut(s) 2242
StyD4I CCNGG 2 cut(s) 400, 2098
StyI CCWWGG 4 cut(s) 333, 2426, 2739, 2751
TaaI ACNGT 5 cut(s) 424, 501, 854, 1402, 2574
TaiI ACGT 4 cut(s) 105, 1855, 1979, 1983
TaqI TCGA 6 cut(s) 378, 662, 1480, 1780, 2838, 2937
TatI WGTACW 1 cut(s) 605
TauI GCSGC 2 cut(s) 269, 1656
TfiI GAWTC 8 cut(s) 5, 277, 283, 388, 435, 1921, 2018, 2188
Tru1I TTAA 9 cut(s) 993, 1218, 1466, 1619, 1686, 1734, 1908, 2625, 2669
Tru9I TTAA 9 cut(s) 993, 1218, 1466, 1619, 1686, 1734, 1908, 2625, 2669
TscAI CASTG 3 cut(s) 247, 2042, 2923
TseFI GTSAC 1 cut(s) 238
TseI GCWGC 3 cut(s) 1472, 2735, 2798
Tsp45I GTSAC 1 cut(s) 238
TspGWI ACGGA 6 cut(s) 53, 63, 804, 1778, 2246, 2984
TspRI CASTG 3 cut(s) 247, 2042, 2923
Tth111I GACNNNGTC 1 cut(s) 2528
Vha464I CTTAAG 2 cut(s) 1685, 2668
VpaK11BI GGWCC 5 cut(s) 137, 691, 1913, 1967, 2430
XapI RAATTY 5 cut(s) 658, 1387, 1745, 2197, 2494
XbaI TCTAGA 1 cut(s) 634
XceI RCATGY 6 cut(s) 331, 595, 627, 966, 2047, 2129
XcmI CCANNNNNNNNNTGG 1 cut(s) 1673
XmiI GTMKAC 3 cut(s) 426, 2581, 2966
XmnI GAANNNNTTC 1 cut(s) 2268
XspI CTAG 4 cut(s) 603, 635, 1058, 1796
ZrmI AGTACT 1 cut(s) 607
Zsp2I ATGCAT 2 cut(s) 593, 1644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.