lysine-specific demethylase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 187 |
| AcsI | RAATTY | 5 cut(s) | 33, 81, 185, 328, 466 |
| AcuI | CTGAAG | 1 cut(s) | 197 |
| AfaI | GTAC | 2 cut(s) | 89, 157 |
| AflII | CTTAAG | 1 cut(s) | 471 |
| AgsI | TTSAA | 2 cut(s) | 33, 327 |
| AluBI | AGCT | 2 cut(s) | 111, 291 |
| AluI | AGCT | 2 cut(s) | 111, 291 |
| Alw26I | GTCTC | 1 cut(s) | 44 |
| AlwI | GGATC | 1 cut(s) | 187 |
| ApeKI | GCWGC | 2 cut(s) | 288, 341 |
| ApoI | RAATTY | 5 cut(s) | 33, 81, 185, 328, 466 |
| AspS9I | GGNCC | 1 cut(s) | 461 |
| AsuHPI | GGTGA | 2 cut(s) | 69, 143 |
| AvaII | GGWCC | 1 cut(s) | 461 |
| BbvI | GCAGC | 2 cut(s) | 300, 353 |
| BccI | CCATC | 1 cut(s) | 414 |
| BcoDI | GTCTC | 1 cut(s) | 44 |
| BfaI | CTAG | 1 cut(s) | 292 |
| BfmI | CTRYAG | 1 cut(s) | 364 |
| BfrI | CTTAAG | 1 cut(s) | 471 |
| BisI | GCNGC | 2 cut(s) | 289, 342 |
| BlsI | GCNGC | 2 cut(s) | 290, 343 |
| Bme18I | GGWCC | 1 cut(s) | 461 |
| BmgT120I | GGNCC | 1 cut(s) | 461 |
| BmsI | GCATC | 1 cut(s) | 387 |
| BpuEI | CTTGAG | 1 cut(s) | 354 |
| Bse1I | ACTGG | 1 cut(s) | 8 |
| Bse3DI | GCAATG | 1 cut(s) | 262 |
| BseGI | GGATG | 1 cut(s) | 402 |
| BseMI | GCAATG | 1 cut(s) | 262 |
| BseNI | ACTGG | 1 cut(s) | 8 |
| BseRI | GAGGAG | 1 cut(s) | 351 |
| BseXI | GCAGC | 2 cut(s) | 300, 353 |
| BsmAI | GTCTC | 1 cut(s) | 44 |
| Bsp1407I | TGTACA | 1 cut(s) | 155 |
| Bsp143I | GATC | 1 cut(s) | 179 |
| BspPI | GGATC | 1 cut(s) | 187 |
| BspTI | CTTAAG | 1 cut(s) | 471 |
| BsrDI | GCAATG | 1 cut(s) | 262 |
| BsrGI | TGTACA | 1 cut(s) | 155 |
| BsrI | ACTGG | 1 cut(s) | 8 |
| BssMI | GATC | 1 cut(s) | 179 |
| Bst6I | CTCTTC | 1 cut(s) | 451 |
| BstAFI | CTTAAG | 1 cut(s) | 471 |
| BstAUI | TGTACA | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 1 cut(s) | 373 |
| BstF5I | GGATG | 1 cut(s) | 402 |
| BstKTI | GATC | 1 cut(s) | 182 |
| BstMAI | GTCTC | 1 cut(s) | 44 |
| BstMBI | GATC | 1 cut(s) | 179 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 233, 368 |
| BstSFI | CTRYAG | 1 cut(s) | 364 |
| BstV1I | GCAGC | 2 cut(s) | 300, 353 |
| BtsCI | GGATG | 1 cut(s) | 402 |
| Cac8I | GCNNGC | 1 cut(s) | 373 |
| Cfr13I | GGNCC | 1 cut(s) | 461 |
| Csp6I | GTAC | 2 cut(s) | 88, 156 |
| CviAII | CATG | 2 cut(s) | 150, 159 |
| CviJI | RGCY | 8 cut(s) | 111, 165, 227, 236, 291, 344, 362, 371 |
| CviKI_1 | RGCY | 8 cut(s) | 111, 165, 227, 236, 291, 344, 362, 371 |
| CviQI | GTAC | 2 cut(s) | 88, 156 |
| DpnI | GATC | 1 cut(s) | 181 |
| DpnII | GATC | 1 cut(s) | 179 |
| Eam1104I | CTCTTC | 1 cut(s) | 451 |
| EarI | CTCTTC | 1 cut(s) | 451 |
| Eco47I | GGWCC | 1 cut(s) | 461 |
| Eco57I | CTGAAG | 1 cut(s) | 197 |
| EcoRI | GAATTC | 1 cut(s) | 81 |
| FaeI | CATG | 2 cut(s) | 153, 162 |
| FaiI | YATR | 8 cut(s) | 106, 108, 151, 160, 197, 249, 251, 366 |
| FatI | CATG | 2 cut(s) | 149, 158 |
| Fnu4HI | GCNGC | 2 cut(s) | 289, 342 |
| FokI | GGATG | 1 cut(s) | 409 |
| Fsp4HI | GCNGC | 2 cut(s) | 289, 342 |
| FspBI | CTAG | 1 cut(s) | 292 |
| GluI | GCNGC | 2 cut(s) | 289, 342 |
| Hin1II | CATG | 2 cut(s) | 153, 162 |
| HinfI | GANTC | 1 cut(s) | 312 |
| HphI | GGTGA | 2 cut(s) | 69, 143 |
| Hpy166II | GTNNAC | 1 cut(s) | 90 |
| Hpy188I | TCNGA | 2 cut(s) | 73, 184 |
| Hpy188III | TCNNGA | 1 cut(s) | 333 |
| Hpy8I | GTNNAC | 1 cut(s) | 90 |
| HpyAV | CCTTC | 2 cut(s) | 238, 355 |
| HpyCH4IV | ACGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 3 cut(s) | 16, 267, 400 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 233, 368 |
| HpySE526I | ACGT | 1 cut(s) | 68 |
| Hsp92II | CATG | 2 cut(s) | 153, 162 |
| Kzo9I | GATC | 1 cut(s) | 179 |
| LmnI | GCTCC | 1 cut(s) | 338 |
| LpnPI | CCDG | 5 cut(s) | 21, 58, 200, 253, 385 |
| Lsp1109I | GCAGC | 2 cut(s) | 300, 353 |
| LweI | GCATC | 1 cut(s) | 387 |
| MaeI | CTAG | 1 cut(s) | 292 |
| MaeII | ACGT | 1 cut(s) | 68 |
| MalI | GATC | 1 cut(s) | 181 |
| MboI | GATC | 1 cut(s) | 179 |
| MboII | GAAGA | 2 cut(s) | 146, 468 |
| MluCI | AATT | 8 cut(s) | 33, 81, 123, 185, 273, 328, 351, 466 |
| MseI | TTAA | 4 cut(s) | 19, 205, 244, 472 |
| MspCI | CTTAAG | 1 cut(s) | 471 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 233, 368 |
| NdeII | GATC | 1 cut(s) | 179 |
| NlaIII | CATG | 2 cut(s) | 153, 162 |
| PfeI | GAWTC | 1 cut(s) | 312 |
| PkrI | GCNGC | 2 cut(s) | 290, 343 |
| PspPI | GGNCC | 1 cut(s) | 461 |
| RsaI | GTAC | 2 cut(s) | 89, 157 |
| RsaNI | GTAC | 2 cut(s) | 88, 156 |
| SaqAI | TTAA | 4 cut(s) | 19, 205, 244, 472 |
| SatI | GCNGC | 2 cut(s) | 289, 342 |
| Sau3AI | GATC | 1 cut(s) | 179 |
| Sau96I | GGNCC | 1 cut(s) | 461 |
| SetI | ASST | 7 cut(s) | 71, 113, 133, 195, 293, 325, 463 |
| SfaNI | GCATC | 1 cut(s) | 387 |
| SfcI | CTRYAG | 1 cut(s) | 364 |
| SinI | GGWCC | 1 cut(s) | 461 |
| SmlI | CTYRAG | 2 cut(s) | 333, 471 |
| SmoI | CTYRAG | 2 cut(s) | 333, 471 |
| Sse9I | AATT | 8 cut(s) | 33, 81, 123, 185, 273, 328, 351, 466 |
| SspMI | CTAG | 1 cut(s) | 292 |
| TaiI | ACGT | 1 cut(s) | 71 |
| TaqI | TCGA | 1 cut(s) | 315 |
| TasI | AATT | 8 cut(s) | 33, 81, 123, 185, 273, 328, 351, 466 |
| TatI | WGTACW | 1 cut(s) | 155 |
| TfiI | GAWTC | 1 cut(s) | 312 |
| Tru1I | TTAA | 4 cut(s) | 19, 205, 244, 472 |
| Tru9I | TTAA | 4 cut(s) | 19, 205, 244, 472 |
| TseI | GCWGC | 2 cut(s) | 288, 341 |
| TspDTI | ATGAA | 3 cut(s) | 94, 138, 469 |
| TspGWI | ACGGA | 2 cut(s) | 75, 419 |
| Vha464I | CTTAAG | 1 cut(s) | 471 |
| VpaK11BI | GGWCC | 1 cut(s) | 461 |
| XapI | RAATTY | 5 cut(s) | 33, 81, 185, 328, 466 |
| XspI | CTAG | 1 cut(s) | 292 |