RLG00000024889

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000280
Physical Location & Seq
Reverse (-)
40067487 .. 40068887
1401 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024889

Sequence Viewer

Length: 1401 bp
ATGGCGGCGATCTGCAGAGACAGGTTGTTCTCTTGGGTTTATTACAGAAAGCGGCGGAGGCAAGAGAGCGGCAGCGGCGGTGTGGTGGAGAAGGGCGGCGAGGGTATTTTGGGAATTGAAGACGAAGAGTCGACTCTGACTCCGGCCGTGATGTTGAAGCAGCTGCGTCGGGAAAAGAAGATGGGGAAGAGTGTTCTGGAGGGTTTAGAGCGTAAAGATTTGATCTTTGGTGATCGAATTGAGGGGCAAAAGGGGAAAGGCGAAGACGGTGAGGACCGTGAGGAGAAGAATCAAGGAAATGGGGTTTTTGATGTGGGTTTTGGCAAAGAGGGAGTGAGTGATGGAATTGAAGAGGGTTTAGTGAAGAAGAAGAAGAAATGTGCTAGAAAGGGTAAGAAATCTGAGAGGTTCGAAGAAAATGGTGATGTGGGTTTTGGTAAAGAGGGAGTGAGAGATGAAAATGAAGAGGGTTTAGTGAAGACTGAGCATGTTAATGGGGTTGTGGAGAAGAATGGAAGATGGAGCATAGCAGAGGAGGATTTTGCTGAGGCCTGTCCTGTTTGCCTTGGGAATTGTAATTGCAAAGCGTGCTTGCGTTTGGATGTGCCTCTGAGATGCATGAAGAATCGAGACTTGGAGATTGGGGAAGACGAGAGGCTAGAGCAGTGTAAGTATTTGGGGAATCGGTTGCTTCCTTATTTAAAGAGGATTAATGATGAACAGGTGAGTGAGATGAAGTTTGAGGCTGAGAAGCAAGGGTTGGTGGAGTTTGAGGAGATGGAAATTGAAAAGTCTAATTGCCGTGTTGGTGAGAGGACGTATTGCAACAACTGCAAGACTTCGATTTTCGACTTTCATAGAAGTTGTCCTGGATGCCAATATGATCTGTGTCCTAAGTGTTGCCGGGAGATTCGGGGTGGAGAGTTGAAGGGAGGTGGGGAGGAAATGATTGAGAAATATGGAAATCGGGGATTTGAGTGTTTTGATGGTGAGGGAAAGATTATTCAGAGGAATGGTGTGGGAACTAGGAGGTTGAGGTCTTCTTCTGCTACAAAGTCAAAGTTTGAATGGAAAGCAGATAAAGATGGAAGCATTCGTTGCCCCCCAGAGCACATGGAAGGTTGCGGTAAGCATCGTTTAGAACTTAGATGTCTGTTTCCTGGAAATAAAGTCATGGAATTGGTAGAGAAAGCTGAAAGTATAGATGAGAGCTATAAAATGTTACATGTTAGTAATGAAACTTGTGAAGAAAGTTGTTCATGTATAAACCCGGTGGATGATGTGAAGTGTAGAAAAGCAGCTTGTAGAGGTGATTCGAAGGAGAACTATTTGTTCTGTCCTGTCCAATGGCTGAAAACATTCAACCCTAGGATTTTGAGCATTTTCAGAGGCATTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

467

Amino Acids

52.8

Weight (kDa)

6.38

Isoelectric Point (pI)

49.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 69
AccI GTMKAC 1 cut(s) 131
AciI CCGC 8 cut(s) 5, 52, 55, 69, 75, 78, 96, 1125
AcoI YGGCCR 1 cut(s) 144
AflIII ACRYGT 1 cut(s) 1225
AgsI TTSAA 7 cut(s) 119, 157, 350, 788, 928, 1067, 1363
AhdI GACNNNNNGTC 1 cut(s) 127
AjnI CCWGG 2 cut(s) 868, 1159
AjuI GAANNNNNNNTTGG 4 cut(s) 617, 649, 743, 775
AluBI AGCT 4 cut(s) 163, 1193, 1212, 1301
AluI AGCT 4 cut(s) 163, 1193, 1212, 1301
Alw21I GWGCWC 1 cut(s) 1113
Alw26I GTCTC 2 cut(s) 12, 624
AoxI GGCC 2 cut(s) 144, 549
ApeKI GCWGC 4 cut(s) 72, 160, 163, 1298
AseI ATTAAT 1 cut(s) 711
Asp700I GAANNNNTTC 1 cut(s) 1358
AspA2I CCTAGG 1 cut(s) 1367
AspS9I GGNCC 1 cut(s) 274
AsuC2I CCSGG 2 cut(s) 905, 1271
AsuHPI GGTGA 7 cut(s) 242, 281, 434, 736, 821, 1001, 1322
AsuII TTCGAA 2 cut(s) 411, 1316
AvaII GGWCC 1 cut(s) 274
AvrII CCTAGG 1 cut(s) 1367
BbsI GAAGAC 5 cut(s) 126, 270, 485, 654, 1032
Bbv12I GWGCWC 1 cut(s) 1113
BbvCI CCTCAGC 1 cut(s) 546
BbvI GCAGC 4 cut(s) 84, 150, 172, 1310
BccI CCATC 6 cut(s) 175, 335, 513, 772, 980, 1079
BceAI ACGGC 2 cut(s) 131, 786
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BciT130I CCWGG 2 cut(s) 870, 1161
BcnI CCSGG 2 cut(s) 905, 1271
BcoDI GTCTC 2 cut(s) 12, 624
BfaI CTAG 4 cut(s) 384, 659, 1026, 1368
BfmI CTRYAG 1 cut(s) 13
BisI GCNGC 9 cut(s) 6, 53, 70, 73, 76, 97, 161, 164, 1299
BlnI CCTAGG 1 cut(s) 1367
BlsI GCNGC 9 cut(s) 7, 54, 71, 74, 77, 98, 162, 165, 1300
Bme1390I CCNGG 4 cut(s) 870, 905, 1161, 1271
Bme18I GGWCC 1 cut(s) 274
BmeRI GACNNNNNGTC 1 cut(s) 127
BmgT120I GGNCC 1 cut(s) 274
BmrFI CCNGG 4 cut(s) 870, 905, 1161, 1271
BmsI GCATC 3 cut(s) 605, 863, 1141
BpiI GAAGAC 5 cut(s) 126, 270, 485, 654, 1032
BpmI CTGGAG 1 cut(s) 218
Bpu10I CCTNAGC 1 cut(s) 546
Bpu14I TTCGAA 2 cut(s) 411, 1316
BpuMI CCSGG 2 cut(s) 905, 1271
BsaJI CCNNGG 2 cut(s) 565, 1367
BsaXI ACNNNNNCTCC 2 cut(s) 124, 154
BseBI CCWGG 2 cut(s) 870, 1161
BseDI CCNNGG 2 cut(s) 565, 1367
BseGI GGATG 3 cut(s) 607, 878, 1282
BseMII CTCAG 5 cut(s) 393, 474, 537, 602, 738
BseRI GAGGAG 3 cut(s) 296, 548, 788
BseX3I CGGCCG 1 cut(s) 144
BseXI GCAGC 4 cut(s) 84, 150, 172, 1310
Bsh1285I CGRYCG 1 cut(s) 147
BshFI GGCC 2 cut(s) 146, 551
BsiEI CGRYCG 1 cut(s) 147
BsiHKAI GWGCWC 1 cut(s) 1113
BsiSI CCGG 3 cut(s) 143, 904, 1271
BsmAI GTCTC 2 cut(s) 12, 624
BsmI GAATGC 1 cut(s) 1092
BsnI GGCC 2 cut(s) 146, 551
Bsp119I TTCGAA 2 cut(s) 411, 1316
Bsp1286I GDGCHC 1 cut(s) 1113
Bsp143I GATC 4 cut(s) 9, 222, 232, 883
BspACI CCGC 8 cut(s) 5, 52, 55, 69, 75, 78, 96, 1125
BspANI GGCC 2 cut(s) 146, 551
BspCNI CTCAG 5 cut(s) 394, 475, 538, 603, 739
BspMAI CTGCAG 1 cut(s) 17
BspT104I TTCGAA 2 cut(s) 411, 1316
BsrBI CCGCTC 1 cut(s) 69
BssECI CCNNGG 2 cut(s) 565, 1367
BssMI GATC 4 cut(s) 9, 222, 232, 883
BssT1I CCWWGG 2 cut(s) 565, 1367
Bst2UI CCWGG 2 cut(s) 870, 1161
Bst4CI ACNGT 2 cut(s) 269, 278
Bst6I CTCTTC 4 cut(s) 120, 182, 345, 459
BstAPI GCANNNNNTGC 3 cut(s) 588, 831, 1098
BstBI TTCGAA 2 cut(s) 411, 1316
BstC8I GCNNGC 2 cut(s) 589, 593
BstDEI CTNAG 7 cut(s) 402, 483, 546, 611, 747, 894, 1145
BstF5I GGATG 3 cut(s) 607, 878, 1282
BstKTI GATC 4 cut(s) 12, 225, 235, 886
BstMAI GTCTC 2 cut(s) 12, 624
BstMBI GATC 4 cut(s) 9, 222, 232, 883
BstMCI CGRYCG 1 cut(s) 147
BstMWI GCNNNNNNNGC 5 cut(s) 58, 75, 588, 831, 1098
BstNI CCWGG 2 cut(s) 870, 1161
BstNSI RCATGY 2 cut(s) 491, 1229
BstSCI CCNGG 4 cut(s) 868, 903, 1159, 1269
BstSFI CTRYAG 1 cut(s) 13
BstV1I GCAGC 4 cut(s) 84, 150, 172, 1310
BstV2I GAAGAC 5 cut(s) 126, 270, 485, 654, 1032
BstZI CGGCCG 1 cut(s) 144
BsuRI GGCC 2 cut(s) 146, 551
BtsCI GGATG 3 cut(s) 607, 878, 1282
BtsI GCAGTG 1 cut(s) 671
BtsIMutI CAGTG 1 cut(s) 671
Cac8I GCNNGC 2 cut(s) 589, 593
Cfr13I GGNCC 1 cut(s) 274
CseI GACGC 1 cut(s) 155
CviAII CATG 6 cut(s) 488, 619, 1114, 1174, 1226, 1260
CviJI RGCY 9 cut(s) 146, 163, 551, 658, 746, 1193, 1212, 1301, 1351
CviKI_1 RGCY 9 cut(s) 146, 163, 551, 658, 746, 1193, 1212, 1301, 1351
DdeI CTNAG 7 cut(s) 402, 483, 546, 611, 747, 894, 1145
DpnI GATC 4 cut(s) 11, 224, 234, 885
DpnII GATC 4 cut(s) 9, 222, 232, 883
DraI TTTAAA 1 cut(s) 702
DriI GACNNNNNGTC 1 cut(s) 127
EaeI YGGCCR 1 cut(s) 144
EagI CGGCCG 1 cut(s) 144
Eam1104I CTCTTC 4 cut(s) 120, 182, 345, 459
Eam1105I GACNNNNNGTC 1 cut(s) 127
EarI CTCTTC 4 cut(s) 120, 182, 345, 459
EciI GGCGGA 1 cut(s) 70
EclXI CGGCCG 1 cut(s) 144
Eco130I CCWWGG 2 cut(s) 565, 1367
Eco147I AGGCCT 1 cut(s) 551
Eco47I GGWCC 1 cut(s) 274
Eco52I CGGCCG 1 cut(s) 144
EcoRII CCWGG 2 cut(s) 868, 1159
EcoT14I CCWWGG 2 cut(s) 565, 1367
EcoT22I ATGCAT 1 cut(s) 620
ErhI CCWWGG 2 cut(s) 565, 1367
FaeI CATG 6 cut(s) 491, 622, 1117, 1177, 1229, 1263
FatI CATG 6 cut(s) 487, 618, 1113, 1173, 1225, 1259
FblI GTMKAC 1 cut(s) 131
Fnu4HI GCNGC 9 cut(s) 6, 53, 70, 73, 76, 97, 161, 164, 1299
FokI GGATG 3 cut(s) 614, 885, 1289
Fsp4HI GCNGC 9 cut(s) 6, 53, 70, 73, 76, 97, 161, 164, 1299
FspBI CTAG 4 cut(s) 384, 659, 1026, 1368
GluI GCNGC 9 cut(s) 6, 53, 70, 73, 76, 97, 161, 164, 1299
GsuI CTGGAG 1 cut(s) 218
HaeIII GGCC 2 cut(s) 146, 551
HapII CCGG 3 cut(s) 143, 904, 1271
HgaI GACGC 1 cut(s) 155
Hin1II CATG 6 cut(s) 491, 622, 1117, 1177, 1229, 1263
HincII GTYRAC 1 cut(s) 132
HindII GTYRAC 1 cut(s) 132
HinfI GANTC 8 cut(s) 128, 133, 139, 289, 625, 682, 910, 1313
HpaII CCGG 3 cut(s) 143, 904, 1271
HphI GGTGA 7 cut(s) 242, 281, 434, 736, 821, 1001, 1322
Hpy166II GTNNAC 1 cut(s) 132
Hpy188I TCNGA 5 cut(s) 138, 403, 612, 1008, 1388
Hpy188III TCNNGA 3 cut(s) 170, 197, 629
Hpy8I GTNNAC 1 cut(s) 132
Hpy99I CGWCG 1 cut(s) 171
HpyAV CCTTC 4 cut(s) 85, 922, 1112, 1312
HpyCH4III ACNGT 2 cut(s) 269, 278
HpyCH4IV ACGT 1 cut(s) 818
HpyCH4V TGCA 5 cut(s) 15, 582, 618, 825, 834
HpyF10VI GCNNNNNNNGC 5 cut(s) 58, 75, 588, 831, 1098
HpyF3I CTNAG 7 cut(s) 402, 483, 546, 611, 747, 894, 1145
HpySE526I ACGT 1 cut(s) 818
Hsp92II CATG 6 cut(s) 491, 622, 1117, 1177, 1229, 1263
Kzo9I GATC 4 cut(s) 9, 222, 232, 883
LmnI GCTCC 1 cut(s) 522
Lsp1109I GCAGC 4 cut(s) 84, 150, 172, 1310
LweI GCATC 3 cut(s) 605, 863, 1141
MaeI CTAG 4 cut(s) 384, 659, 1026, 1368
MaeII ACGT 1 cut(s) 818
MaeIII GTNAC 1 cut(s) 1221
MalI GATC 4 cut(s) 11, 224, 234, 885
MbiI CCGCTC 1 cut(s) 69
MboI GATC 4 cut(s) 9, 222, 232, 883
MhlI GDGCHC 1 cut(s) 1113
MluCI AATT 8 cut(s) 114, 237, 345, 571, 577, 783, 796, 1178
MlyI GAGTC 3 cut(s) 127, 133, 137
Mph1103I ATGCAT 1 cut(s) 620
MroXI GAANNNNTTC 1 cut(s) 1358
MseI TTAA 3 cut(s) 492, 701, 711
MslI CAYNNNNRTG 1 cut(s) 492
MspA1I CMGCKG 2 cut(s) 75, 163
MspI CCGG 3 cut(s) 143, 904, 1271
MspR9I CCNGG 4 cut(s) 870, 905, 1161, 1271
Mva1269I GAATGC 1 cut(s) 1092
MvaI CCWGG 2 cut(s) 870, 1161
MwoI GCNNNNNNNGC 5 cut(s) 58, 75, 588, 831, 1098
NciI CCSGG 2 cut(s) 905, 1271
NdeII GATC 4 cut(s) 9, 222, 232, 883
NlaIII CATG 6 cut(s) 491, 622, 1117, 1177, 1229, 1263
NsiI ATGCAT 1 cut(s) 620
NspI RCATGY 2 cut(s) 491, 1229
NspV TTCGAA 2 cut(s) 411, 1316
PceI AGGCCT 1 cut(s) 551
PciI ACATGT 1 cut(s) 1225
PctI GAATGC 1 cut(s) 1092
PdmI GAANNNNTTC 1 cut(s) 1358
PfeI GAWTC 5 cut(s) 289, 625, 682, 910, 1313
PfoI TCCNGGA 2 cut(s) 868, 1159
PkrI GCNGC 9 cut(s) 7, 54, 71, 74, 77, 98, 162, 165, 1300
PleI GAGTC 3 cut(s) 127, 133, 136
PpsI GAGTC 3 cut(s) 127, 133, 136
PscI ACATGT 1 cut(s) 1225
PshBI ATTAAT 1 cut(s) 711
Psp6I CCWGG 2 cut(s) 868, 1159
PspGI CCWGG 2 cut(s) 868, 1159
PspPI GGNCC 1 cut(s) 274
PstI CTGCAG 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 163
RseI CAYNNNNRTG 1 cut(s) 492
SalI GTCGAC 1 cut(s) 130
SaqAI TTAA 3 cut(s) 492, 701, 711
SatI GCNGC 9 cut(s) 6, 53, 70, 73, 76, 97, 161, 164, 1299
Sau3AI GATC 4 cut(s) 9, 222, 232, 883
Sau96I GGNCC 1 cut(s) 274
SchI GAGTC 3 cut(s) 127, 133, 137
ScrFI CCNGG 4 cut(s) 870, 905, 1161, 1271
SduI GDGCHC 1 cut(s) 1113
SfaNI GCATC 3 cut(s) 605, 863, 1141
SfcI CTRYAG 1 cut(s) 13
SfuI TTCGAA 2 cut(s) 411, 1316
SinI GGWCC 1 cut(s) 274
SmiMI CAYNNNNRTG 1 cut(s) 492
Sse9I AATT 8 cut(s) 114, 237, 345, 571, 577, 783, 796, 1178
SseBI AGGCCT 1 cut(s) 551
SsiI CCGC 8 cut(s) 5, 52, 55, 69, 75, 78, 96, 1125
SspMI CTAG 4 cut(s) 384, 659, 1026, 1368
StuI AGGCCT 1 cut(s) 551
StyD4I CCNGG 4 cut(s) 868, 903, 1159, 1269
StyI CCWWGG 2 cut(s) 565, 1367
TaaI ACNGT 2 cut(s) 269, 278
TaiI ACGT 1 cut(s) 821
TaqI TCGA 7 cut(s) 131, 235, 411, 628, 842, 849, 1316
TasI AATT 8 cut(s) 114, 237, 345, 571, 577, 783, 796, 1178
TauI GCSGC 5 cut(s) 8, 55, 72, 78, 99
TfiI GAWTC 5 cut(s) 289, 625, 682, 910, 1313
Tru1I TTAA 3 cut(s) 492, 701, 711
Tru9I TTAA 3 cut(s) 492, 701, 711
TscAI CASTG 1 cut(s) 671
TseI GCWGC 4 cut(s) 72, 160, 163, 1298
TspDTI ATGAA 8 cut(s) 471, 477, 635, 732, 749, 845, 1248, 1251
TspRI CASTG 1 cut(s) 671
VpaK11BI GGWCC 1 cut(s) 274
VspI ATTAAT 1 cut(s) 711
XceI RCATGY 2 cut(s) 491, 1229
XmaJI CCTAGG 1 cut(s) 1367
XmiI GTMKAC 1 cut(s) 131
XmnI GAANNNNTTC 1 cut(s) 1358
XspI CTAG 4 cut(s) 384, 659, 1026, 1368
Zsp2I ATGCAT 1 cut(s) 620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.