MD07G1099700.v1.1

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000280
Physical Location & Seq
Reverse (-)
10996082 .. 11000309
4228 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1099700.v1.1.491

Sequence Viewer

Length: 1791 bp
ATGTTTTTGGTTTTTTTTTTACAGTGGAATGAGGAAGACGACTCTTTATTGTGCCACTGCCATCAGTGTAAGAGGAATGATAAGGGCAGGTTGTTTGGTGCAGAACTTGTAAAACAAATCGATTTTGTATCCCTTGCGTATCCTCATATGTCGGAGGAAGCCATTGCTGAAGCTTGTCCTATATGCCTTGGAAATTGCAATTGCAAAGCATGCTTACGTTTAGAAAAGTTGAAGAATCTGTTGGAATTTCACATTTGCAAAGATGACGCAGTTGAGCACTCTAAGTATTTACTTCAAGCATTGCTTCCATTCTTCAAAAGACTTAATGATGAACAAATGATTGAGATTGAGATTGAGGCTAGGAGACAAGGTATAGTTCTGTGGCAGACATGTGTTGGAACTCATCAGATTGTCGGGAAACCTATTTCAGAGCTAAAGATACTAAGGTCAGATTGCCCCGAGGATGATCGTATATATTGCAACAACTCAAAACTTCTATTTTTGGATTTTCACAGAAGCTGCCCTAAATGTTCCTATGATCTTTGCCTCACCTGTTGCCGGGAGATTCGAGATGGACACCTGCAGGGAGAAGTGCCTTCTGAAACTAGCACCAAGTGTCGTGCATGGCCGAAATCTGAGTGGAAAGCAAATTTAGATGGGAGTGTTCTTTGCCCTCCGAAGGACATGGGTGCTTGTGGTTGTACTCTTTTAGAATTGAGATGCATGTTTTCTGAAAGCCACATTAGCCAGTTGGTAAAAAAAGCAGAAGAAATTGTTGAAACACATCAACGCATGCATGTGTCTGGAACTTCTGCACAACAGCGTTGCAACTCTCTGGGTATCCTTGACGCGATCAGCAATAAGTTAAGGAAAGCAGCTTCTCGAGAGGGATCTGATGAAAACTTTTTATACCGTCCAAGAGGTAAAGACATCCAACCGGAGGATTTAAAGCATTTTCAATGTCATTGGATCCAGGGAGAACCTGTGATTGTAACTAGTGTCCTTGAAATTGCATTAGGTTTAAGCTGGGAACCACAGGTCATGTGGAGCGCTTGTCGTCAGACGCGACATGCTAAGCGGGATAGACATATCGAAGTGAATGCCATTAATTGTTTGGATTGGTGTCATGTCCGTTATTCTGACTTTGAATTGCTCAGTACTGTTTGTAAATGTGAAATCTCTGTTGATGGTCTGAATTGGATATGTGATGAAACGCAGGTAGATATCAACATCCACCATTTTTTTAATGGATATTTGAAGGGTCGGTTTGATAGGGAAATGTGGCCTCAGATGTTGAAACTCAATGATCCATCCCTAGATGATTCTTTCCAGGAGCACCTTCCTCGTCACTGTGCTGAGTTCATTTGTTGCTTGCCATTTAAGGAATATACTCATCCTTACCGTGGCTTTTTGAACCTTTCTGTCAAATTGCCTACAGAATGCGTGAAGCCAGTCATGGGACCAAAGACATACATCGCTTATGGTATTTCCCAGGAGCTTGGTCGTGGAGATTCTGTGAATATTTTGATGCATACTACTGAAGTGACCTGTAATCCTGAGCAAATTGTTACTATAGAAAGGTTAAAGAAAAAGCACGCTGAACATGACAGGACGGAAATTTTTGGAAATTCTGAGACTTCGGATGACAAAGTTGATACTAACAAGGCTGGCCATGGGTCTTGTGGCAACAATGCAAATGATAAAGAATTTTGTTTTGAAACCCAAGGAAGATTTTCTTGCTCTGAAACACGAAATCGGATGTTTTTCATACATCAATTAAATCATACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

597

Amino Acids

68.58

Weight (kDa)

6.09

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 588
Acc36I ACCTGC 3 cut(s) 78, 588, 1207
AccII CGCG 2 cut(s) 851, 1066
AciI CCGC 1 cut(s) 1078
AclWI GGATC 4 cut(s) 898, 964, 977, 1301
AcoI YGGCCR 2 cut(s) 626, 1669
AcsI RAATTY 5 cut(s) 245, 649, 1617, 1627, 1706
AcuI CTGAAG 2 cut(s) 189, 1560
AdeI CACNNNGTG 1 cut(s) 615
AfaI GTAC 2 cut(s) 703, 1159
AfeI AGCGCT 1 cut(s) 1051
AfiI CCNNNNNNNGG 5 cut(s) 558, 679, 940, 1403, 1457
AflIII ACRYGT 1 cut(s) 389
AhlI ACTAGT 1 cut(s) 995
AjnI CCWGG 3 cut(s) 972, 1329, 1491
AjuI GAANNNNNNNTTGG 2 cut(s) 224, 256
AluBI AGCT 6 cut(s) 173, 433, 519, 878, 1026, 1498
AluI AGCT 6 cut(s) 173, 433, 519, 878, 1026, 1498
Alw21I GWGCWC 2 cut(s) 279, 1338
Alw26I GTCTC 2 cut(s) 358, 1628
AlwI GGATC 4 cut(s) 898, 964, 977, 1301
AlwNI CAGNNNCTG 1 cut(s) 519
Ama87I CYCGRG 2 cut(s) 458, 882
Aor51HI AGCGCT 1 cut(s) 1051
AoxI GGCC 3 cut(s) 626, 1283, 1669
ApeKI GCWGC 2 cut(s) 519, 875
ApoI RAATTY 5 cut(s) 245, 649, 1617, 1627, 1706
AseI ATTAAT 1 cut(s) 1107
Asp700I GAANNNNTTC 1 cut(s) 1732
AspLEI GCGC 1 cut(s) 1052
AspS9I GGNCC 1 cut(s) 1460
AsuC2I CCSGG 1 cut(s) 560
AsuHPI GGTGA 1 cut(s) 541
AvaI CYCGRG 2 cut(s) 458, 882
AvaII GGWCC 1 cut(s) 1460
BaeI ACNNNNGTAYC 2 cut(s) 431, 464
BalI TGGCCA 1 cut(s) 1671
BamHI GGATCC 1 cut(s) 969
BbsI GAAGAC 1 cut(s) 42
Bbv12I GWGCWC 2 cut(s) 279, 1338
BbvI GCAGC 2 cut(s) 506, 887
BccI CCATC 5 cut(s) 69, 566, 650, 1181, 1318
BcgI CGANNNNNNTGC 4 cut(s) 1082, 1116, 1325, 1359
BciT130I CCWGG 3 cut(s) 974, 1331, 1493
BciVI GTATCC 3 cut(s) 139, 150, 851
BcnI CCSGG 1 cut(s) 560
BcoDI GTCTC 2 cut(s) 358, 1628
BcuI ACTAGT 1 cut(s) 995
BfaI CTAG 4 cut(s) 360, 606, 996, 1316
BfmI CTRYAG 3 cut(s) 581, 1434, 1572
BfoI RGCGCY 1 cut(s) 1053
BfuAI ACCTGC 3 cut(s) 78, 588, 1207
BfuI GTATCC 3 cut(s) 139, 150, 851
BisI GCNGC 2 cut(s) 520, 876
BlpI GCTNAGC 1 cut(s) 1074
BlsI GCNGC 2 cut(s) 521, 877
BmcAI AGTACT 1 cut(s) 1159
Bme1390I CCNGG 4 cut(s) 560, 974, 1331, 1493
Bme18I GGWCC 1 cut(s) 1460
BmeT110I CYCGRG 2 cut(s) 458, 882
BmgT120I GGNCC 1 cut(s) 1460
BmiI GGNNCC 3 cut(s) 971, 1032, 1461
BmrFI CCNGG 4 cut(s) 560, 974, 1331, 1493
BmsI GCATC 2 cut(s) 710, 1518
BpiI GAAGAC 1 cut(s) 42
Bpu10I CCTNAGC 1 cut(s) 1557
Bpu1102I GCTNAGC 1 cut(s) 1074
BpuMI CCSGG 1 cut(s) 560
Bsa29I ATCGAT 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 1788
BsaJI CCNNGG 7 cut(s) 187, 459, 973, 1402, 1491, 1672, 1723
BsaWI WCCGGW 1 cut(s) 937
BsaXI ACNNNNNCTCC 8 cut(s) 355, 385, 969, 999, 1039, 1069, 1500, 1530
Bsc4I CCNNNNNNNGG 5 cut(s) 558, 679, 940, 1403, 1457
Bse1I ACTGG 2 cut(s) 748, 1451
Bse3DI GCAATG 2 cut(s) 162, 299
BseBI CCWGG 3 cut(s) 974, 1331, 1493
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 7 cut(s) 187, 459, 973, 1402, 1491, 1672, 1723
BseGI GGATG 7 cut(s) 469, 930, 1230, 1310, 1393, 1648, 1764
BseLI CCNNNNNNNGG 5 cut(s) 558, 679, 940, 1403, 1457
BseMI GCAATG 2 cut(s) 162, 299
BseMII CTCAG 6 cut(s) 627, 1168, 1301, 1347, 1548, 1623
BseNI ACTGG 2 cut(s) 748, 1451
BseXI GCAGC 2 cut(s) 506, 887
BseYI CCCAGC 1 cut(s) 1026
BsgI GTGCAG 2 cut(s) 120, 798
Bsh1236I CGCG 2 cut(s) 851, 1066
BshFI GGCC 3 cut(s) 628, 1285, 1671
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 2 cut(s) 279, 1338
BsiHKCI CYCGRG 2 cut(s) 458, 882
BsiSI CCGG 2 cut(s) 559, 938
BslFI GGGAC 1 cut(s) 1473
BslI CCNNNNNNNGG 5 cut(s) 558, 679, 940, 1403, 1457
BsmAI GTCTC 2 cut(s) 358, 1628
BsmFI GGGAC 1 cut(s) 1473
BsmI GAATGC 2 cut(s) 1105, 1445
BsnI GGCC 3 cut(s) 628, 1285, 1671
BsoBI CYCGRG 2 cut(s) 458, 882
Bsp1286I GDGCHC 2 cut(s) 279, 1338
Bsp143I GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
Bsp1720I GCTNAGC 1 cut(s) 1074
Bsp19I CCATGG 1 cut(s) 1672
BspACI CCGC 1 cut(s) 1078
BspANI GGCC 3 cut(s) 628, 1285, 1671
BspCNI CTCAG 6 cut(s) 628, 1167, 1300, 1348, 1549, 1624
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 2 cut(s) 851, 1066
BspLI GGNNCC 3 cut(s) 971, 1032, 1461
BspMAI CTGCAG 1 cut(s) 585
BspMI ACCTGC 3 cut(s) 78, 588, 1207
BspPI GGATC 4 cut(s) 898, 964, 977, 1301
BsrDI GCAATG 2 cut(s) 162, 299
BsrI ACTGG 2 cut(s) 748, 1451
BssECI CCNNGG 7 cut(s) 187, 459, 973, 1402, 1491, 1672, 1723
BssMI GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
BssT1I CCWWGG 3 cut(s) 187, 1672, 1723
Bst2UI CCWGG 3 cut(s) 974, 1331, 1493
Bst4CI ACNGT 5 cut(s) 24, 914, 1162, 1352, 1403
BstAPI GCANNNNNTGC 1 cut(s) 210
BstBAI YACGTR 1 cut(s) 1788
BstC8I GCNNGC 5 cut(s) 211, 794, 1373, 1596, 1669
BstDEI CTNAG 9 cut(s) 282, 443, 636, 1074, 1154, 1287, 1356, 1557, 1632
BstDSI CCRYGG 2 cut(s) 1402, 1672
BstF5I GGATG 7 cut(s) 469, 930, 1230, 1310, 1393, 1648, 1764
BstFNI CGCG 2 cut(s) 851, 1066
BstH2I RGCGCY 1 cut(s) 1053
BstHHI GCGC 1 cut(s) 1052
BstKTI GATC 6 cut(s) 469, 541, 855, 893, 972, 1309
BstMAI GTCTC 2 cut(s) 358, 1628
BstMBI GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
BstMWI GCNNNNNNNGC 2 cut(s) 210, 744
BstNI CCWGG 3 cut(s) 974, 1331, 1493
BstNSI RCATGY 6 cut(s) 213, 393, 727, 796, 800, 1073
BstSCI CCNGG 4 cut(s) 558, 972, 1329, 1491
BstSFI CTRYAG 3 cut(s) 581, 1434, 1572
BstSNI TACGTA 1 cut(s) 1788
BstUI CGCG 2 cut(s) 851, 1066
BstV1I GCAGC 2 cut(s) 506, 887
BstV2I GAAGAC 1 cut(s) 42
BstX2I RGATCY 2 cut(s) 890, 969
BstXI CCANNNNNNTGG 1 cut(s) 1499
BstYI RGATCY 2 cut(s) 890, 969
Bsu15I ATCGAT 1 cut(s) 120
BsuI GTATCC 3 cut(s) 139, 150, 851
BsuRI GGCC 3 cut(s) 628, 1285, 1671
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 2 cut(s) 1402, 1672
BtgZI GCGATG 1 cut(s) 1459
BtsCI GGATG 7 cut(s) 469, 930, 1230, 1310, 1393, 1648, 1764
BtsI GCAGTG 1 cut(s) 55
BtsIMutI CAGTG 4 cut(s) 29, 55, 71, 1348
BveI ACCTGC 3 cut(s) 78, 588, 1207
Cac8I GCNNGC 5 cut(s) 211, 794, 1373, 1596, 1669
CaiI CAGNNNCTG 1 cut(s) 519
CfoI GCGC 1 cut(s) 1052
Cfr13I GGNCC 1 cut(s) 1460
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 3 cut(s) 275, 857, 1072
Csp6I GTAC 2 cut(s) 702, 1158
CviQI GTAC 2 cut(s) 702, 1158
DdeI CTNAG 9 cut(s) 282, 443, 636, 1074, 1154, 1287, 1356, 1557, 1632
DpnI GATC 6 cut(s) 468, 540, 854, 892, 971, 1308
DpnII GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
DraI TTTAAA 1 cut(s) 948
DraIII CACNNNGTG 1 cut(s) 615
EaeI YGGCCR 2 cut(s) 626, 1669
Eco105I TACGTA 1 cut(s) 1788
Eco130I CCWWGG 3 cut(s) 187, 1672, 1723
Eco32I GATATC 1 cut(s) 1225
Eco47I GGWCC 1 cut(s) 1460
Eco47III AGCGCT 1 cut(s) 1051
Eco57I CTGAAG 2 cut(s) 189, 1560
Eco88I CYCGRG 2 cut(s) 458, 882
EcoRII CCWGG 3 cut(s) 972, 1329, 1491
EcoRV GATATC 1 cut(s) 1225
EcoT14I CCWWGG 3 cut(s) 187, 1672, 1723
EcoT22I ATGCAT 3 cut(s) 725, 798, 1533
ErhI CCWWGG 3 cut(s) 187, 1672, 1723
FalI AAGNNNNNCTT 4 cut(s) 288, 320, 1720, 1752
FaqI GGGAC 1 cut(s) 1473
FauI CCCGC 1 cut(s) 1071
FauNDI CATATG 1 cut(s) 147
Fnu4HI GCNGC 2 cut(s) 520, 876
FokI GGATG 7 cut(s) 476, 917, 1217, 1297, 1380, 1655, 1771
Fsp4HI GCNGC 2 cut(s) 520, 876
FspBI CTAG 4 cut(s) 360, 606, 996, 1316
GlaI GCGC 1 cut(s) 1051
GluI GCNGC 2 cut(s) 520, 876
GsaI CCCAGC 1 cut(s) 1030
HaeII RGCGCY 1 cut(s) 1053
HaeIII GGCC 3 cut(s) 628, 1285, 1671
HapII CCGG 2 cut(s) 559, 938
HgaI GACGC 3 cut(s) 275, 857, 1072
HhaI GCGC 1 cut(s) 1052
Hin6I GCGC 1 cut(s) 1050
HinP1I GCGC 1 cut(s) 1050
HindIII AAGCTT 1 cut(s) 171
HinfI GANTC 5 cut(s) 41, 235, 565, 1322, 1511
HpaII CCGG 2 cut(s) 559, 938
HphI GGTGA 1 cut(s) 541
Hpy188III TCNNGA 6 cut(s) 415, 569, 804, 882, 884, 1556
HpyAV CCTTC 4 cut(s) 606, 673, 1252, 1349
HpyCH4III ACNGT 5 cut(s) 24, 914, 1162, 1352, 1403
HpyCH4IV ACGT 2 cut(s) 217, 1787
HpyF10VI GCNNNNNNNGC 2 cut(s) 210, 744
HpyF3I CTNAG 9 cut(s) 282, 443, 636, 1074, 1154, 1287, 1356, 1557, 1632
HpySE526I ACGT 2 cut(s) 217, 1787
HspAI GCGC 1 cut(s) 1050
Kzo9I GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
LmnI GCTCC 3 cut(s) 1047, 1333, 1495
Lsp1109I GCAGC 2 cut(s) 506, 887
LweI GCATC 2 cut(s) 710, 1518
MaeI CTAG 4 cut(s) 360, 606, 996, 1316
MaeII ACGT 2 cut(s) 217, 1787
MaeIII GTNAC 4 cut(s) 991, 1346, 1543, 1567
MalI GATC 6 cut(s) 468, 540, 854, 892, 971, 1308
MboI GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
MboII GAAGA 5 cut(s) 47, 244, 304, 779, 1740
MfeI CAATTG 1 cut(s) 199
MflI RGATCY 2 cut(s) 890, 969
MhlI GDGCHC 2 cut(s) 279, 1338
MlsI TGGCCA 1 cut(s) 1671
MluNI TGGCCA 1 cut(s) 1671
MlyI GAGTC 1 cut(s) 35
MmeI TCCRAC 4 cut(s) 132, 222, 376, 958
Mox20I TGGCCA 1 cut(s) 1671
Mph1103I ATGCAT 3 cut(s) 725, 798, 1533
MroXI GAANNNNTTC 1 cut(s) 1732
MscI TGGCCA 1 cut(s) 1671
MseI TTAA 9 cut(s) 324, 866, 947, 1022, 1107, 1245, 1380, 1583, 1778
MslI CAYNNNNRTG 1 cut(s) 797
Msp20I TGGCCA 1 cut(s) 1671
MspI CCGG 2 cut(s) 559, 938
MspR9I CCNGG 4 cut(s) 560, 974, 1331, 1493
MunI CAATTG 1 cut(s) 199
Mva1269I GAATGC 2 cut(s) 1105, 1445
MvaI CCWGG 3 cut(s) 974, 1331, 1493
MvnI CGCG 2 cut(s) 851, 1066
MwoI GCNNNNNNNGC 2 cut(s) 210, 744
NciI CCSGG 1 cut(s) 560
NcoI CCATGG 1 cut(s) 1672
NdeI CATATG 1 cut(s) 147
NdeII GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
NlaIV GGNNCC 3 cut(s) 971, 1032, 1461
NmuCI GTSAC 2 cut(s) 1346, 1543
NsiI ATGCAT 3 cut(s) 725, 798, 1533
NspI RCATGY 6 cut(s) 213, 393, 727, 796, 800, 1073
PaeI GCATGC 2 cut(s) 213, 796
PaeR7I CTCGAG 1 cut(s) 882
PaqCI CACCTGC 1 cut(s) 588
PciI ACATGT 1 cut(s) 389
PcsI WCGNNNNNNNCGW 1 cut(s) 1063
PctI GAATGC 2 cut(s) 1105, 1445
PdmI GAANNNNTTC 1 cut(s) 1732
PfeI GAWTC 4 cut(s) 235, 565, 1322, 1511
PfoI TCCNGGA 1 cut(s) 1329
PkrI GCNGC 2 cut(s) 521, 877
PleI GAGTC 1 cut(s) 35
PpsI GAGTC 1 cut(s) 35
Ppu21I YACGTR 1 cut(s) 1788
PscI ACATGT 1 cut(s) 389
PshBI ATTAAT 1 cut(s) 1107
Psp6I CCWGG 3 cut(s) 972, 1329, 1491
PspFI CCCAGC 1 cut(s) 1026
PspGI CCWGG 3 cut(s) 972, 1329, 1491
PspN4I GGNNCC 3 cut(s) 971, 1032, 1461
PspPI GGNCC 1 cut(s) 1460
PstI CTGCAG 1 cut(s) 585
PstNI CAGNNNCTG 1 cut(s) 519
PsuI RGATCY 2 cut(s) 890, 969
RsaI GTAC 2 cut(s) 703, 1159
RsaNI GTAC 2 cut(s) 702, 1158
RseI CAYNNNNRTG 1 cut(s) 797
SaqAI TTAA 9 cut(s) 324, 866, 947, 1022, 1107, 1245, 1380, 1583, 1778
SatI GCNGC 2 cut(s) 520, 876
Sau3AI GATC 6 cut(s) 466, 538, 852, 890, 969, 1306
Sau96I GGNCC 1 cut(s) 1460
SbfI CCTGCAGG 1 cut(s) 585
ScaI AGTACT 1 cut(s) 1159
SchI GAGTC 1 cut(s) 35
ScrFI CCNGG 4 cut(s) 560, 974, 1331, 1493
SdaI CCTGCAGG 1 cut(s) 585
SduI GDGCHC 2 cut(s) 279, 1338
SfaNI GCATC 2 cut(s) 710, 1518
SfcI CTRYAG 3 cut(s) 581, 1434, 1572
Sfr274I CTCGAG 1 cut(s) 882
SinI GGWCC 1 cut(s) 1460
SlaI CTCGAG 1 cut(s) 882
SmiMI CAYNNNNRTG 1 cut(s) 797
SmlI CTYRAG 1 cut(s) 882
SmoI CTYRAG 1 cut(s) 882
SnaBI TACGTA 1 cut(s) 1788
SpeI ACTAGT 1 cut(s) 995
SphI GCATGC 2 cut(s) 213, 796
Sse8387I CCTGCAGG 1 cut(s) 585
SsiI CCGC 1 cut(s) 1078
SspI AATATT 1 cut(s) 1522
SspMI CTAG 4 cut(s) 360, 606, 996, 1316
StyD4I CCNGG 4 cut(s) 558, 972, 1329, 1491
StyI CCWWGG 3 cut(s) 187, 1672, 1723
TaaI ACNGT 5 cut(s) 24, 914, 1162, 1352, 1403
TaiI ACGT 2 cut(s) 220, 1790
TaqI TCGA 4 cut(s) 120, 568, 883, 1092
TatI WGTACW 2 cut(s) 701, 1157
TfiI GAWTC 4 cut(s) 235, 565, 1322, 1511
Tru1I TTAA 9 cut(s) 324, 866, 947, 1022, 1107, 1245, 1380, 1583, 1778
Tru9I TTAA 9 cut(s) 324, 866, 947, 1022, 1107, 1245, 1380, 1583, 1778
TscAI CASTG 4 cut(s) 29, 62, 71, 1355
TseFI GTSAC 2 cut(s) 1346, 1543
TseI GCWGC 2 cut(s) 519, 875
Tsp45I GTSAC 2 cut(s) 1346, 1543
TspDTI ATGAA 5 cut(s) 345, 912, 1224, 1351, 1756
TspGWI ACGGA 2 cut(s) 1121, 1628
TspRI CASTG 4 cut(s) 29, 62, 71, 1355
VpaK11BI GGWCC 1 cut(s) 1460
VspI ATTAAT 1 cut(s) 1107
XapI RAATTY 5 cut(s) 245, 649, 1617, 1627, 1706
XceI RCATGY 6 cut(s) 213, 393, 727, 796, 800, 1073
XcmI CCANNNNNNNNNTGG 4 cut(s) 1041, 1111, 1244, 1679
XhoI CTCGAG 1 cut(s) 882
XmnI GAANNNNTTC 1 cut(s) 1732
XspI CTAG 4 cut(s) 360, 606, 996, 1316
ZrmI AGTACT 1 cut(s) 1159
Zsp2I ATGCAT 3 cut(s) 725, 798, 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.