Rw1G016720

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000280
Physical Location & Seq
Reverse (-)
37251091 .. 37254959
3869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G016720.1

Sequence Viewer

Length: 1848 bp
ATGGCAGGGTTTGGGGGTGAGGGCATTTTGGGAAATCAAAATTATAGGACCAAACGGGTGGGAGGTGAAGGGAGTTGGGATTCTCCGAGCTTGAGGAAGAGGAAGAGAGAAGGTGAAGCTGGAGGGTCATGTTCTAAGAAGAAATGTACTAAGGGCTCAAATTGGTTTAATTGGAAGTCCTCAATGTGCCATCAGTGTCAGAGGAATGATAGGGCCAGAGTTGTTAACTGCACAAGTTGTAAGCGGAAGCGATTTTGTGTATCATGCATTCAGAATTGGTATCCCCAGATGTCAGAGGAGGCAATTGCTGATGCTTGTCCTGTATGCCTTGGAAATTGCAATTGCAAAGCGTGCTTGCGTTTAGATGAAACTAATCATAATTTGAATAGCAAGCTTGCATTGCACGTTAGCAAAGATGAAGAAGTGGAGCACTCTAAGTATTTGCTTGAAGCATTGCTTCCATTCTTGAAAAGACTTAATGATGAACAAGTTATAGAGATGGTGATGGAGGCTAGAAGACAAGGGAAATCTCTTTCGGAGCTAAAGATCCAAAGGTCGGACAGCTCTCCTGATTATCGTGTATACTGCGACAACTGCAATACATCTATTATTGATTTCCACAGAAGCTGTCCTATATGTTCATATGACCTTTGTCTTATCTGCTGCCGGGAGATTCGAGATGGAAACCAGCAAGGAAGTGCAGAAGAAGTGATTGGGGAGTATATCAATCAAGGTCTAGACTATTTACATGGTGGAAAGGGCAACTTAATAAAAAAGCCTTCTGAAACTAAACTCAAGTGTCCTGTAAGGTCAACATCTAAGTGGAAAGTAAGCAAAGATCGAAGTATTTTTTGCCCCTCAAAAGACATGGACAGCTGTGGTTGTAGTGTTCTAGAACTGAGATGCATATTTTCTGAAAACCACATCATAGAGTTGGTAGAAAAAGCAGAAGAAATTGCAGAAACTAAAAAACTGATGTATGCAGCTGGACCTTCTGCACAGAAGTTTTCATGGTTCAACTCTGCAGGTGGTGCTGACTCAAGAGGCAATGAATTGACGAAAGCAGCATCTCGAGAGGATTCGGAGGACAACTACTTGTACAGTCCAAGGGCTATAAATATCCAACATGAAGACTTTAAGCATTTTCGCTGTCATTGGATCCAGGGTGAGCCTGTGATTGTGGGGAATGTGCTTGAAACTGCAACAGGTTTGAGCTGGGAACCATTTGTCATGTGGCGTGCTTGTCGTCAGATGAGAAATACCGGGCATGATAGACATGTGGAATTTAAGGCCATTGATTGCTTGGATTGGTGTGAGCTAGATATCGGTATCCACCAATTTTTTACTGGATATTTGGAGGGCCAGTTTGATGGGAAAATGTGGCCTCGTATTCTGAAACTCAACGATCAGTCCCTTGATGATTATTTGGAGAAGCGCCTTCCTCGTCATTGTGCTGAGTTTATTTGTTGCTTGCCATTTAAGGAATATACCCATCCTCGCAGTGGCCTCCTGAACCTTGCTGTAAAATTGCCTATGGAGTGTGTAAAGCCAGACATGGGGCCAAAAATGGATATTGCTTATGGTGTGTCCCAGGAGCTTGGACGTGGAGATTCAGTAACTAAGCTTCACTGTGATTCATGTGATGTGGTATGTTTTCTGTTTTGCATATCTGCTGACTTTTCTTTTCTTTGGCTAAGTGGGGGTAAGCAGCTGCACATAGCTGTGTTTATTGCCCATATGATCTCTTGTTTGATGTATGTTGTACTTAGAAACAAGCGATGCTTAATGGCAACTCACTCAGGTGAAGTTTCGCGTCTGATCATTTTCCTCCGATGGGCTGATAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

615

Amino Acids

69.98

Weight (kDa)

8.02

Isoelectric Point (pI)

52.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1016
Acc36I ACCTGC 1 cut(s) 1016
AccI GTMKAC 1 cut(s) 582
AccII CGCG 1 cut(s) 1813
AciI CCGC 1 cut(s) 244
AclWI GGATC 3 cut(s) 541, 1153, 1166
AcsI RAATTY 1 cut(s) 1283
AfaI GTAC 3 cut(s) 148, 1100, 1764
AfiI CCNNNNNNNGG 4 cut(s) 556, 1502, 1556, 1834
AflIII ACRYGT 1 cut(s) 1276
AgsI TTSAA 5 cut(s) 385, 449, 469, 1018, 1196
AjiI CACGTC 1 cut(s) 1604
AjnI CCWGG 2 cut(s) 1161, 1590
AjuI GAANNNNNNNTTGG 2 cut(s) 696, 728
AleI CACNNNNGTG 1 cut(s) 1800
Alw21I GWGCWC 1 cut(s) 432
AlwI GGATC 3 cut(s) 541, 1153, 1166
AlwNI CAGNNNCTG 1 cut(s) 627
Ama87I CYCGRG 1 cut(s) 1071
AoxI GGCC 6 cut(s) 213, 1290, 1360, 1382, 1504, 1559
ApeKI GCWGC 5 cut(s) 663, 983, 1064, 1708, 1711
ApoI RAATTY 1 cut(s) 1283
AspLEI GCGC 1 cut(s) 1437
AspS9I GGNCC 5 cut(s) 48, 213, 989, 1360, 1559
AsuC2I CCSGG 2 cut(s) 668, 1264
AsuHPI GGTGA 6 cut(s) 29, 77, 125, 514, 1178, 1814
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 2 cut(s) 48, 989
BamHI GGATCC 1 cut(s) 1158
BanII GRGCYC 1 cut(s) 158
BarI GAAGNNNNNNTAC 2 cut(s) 1608, 1640
BbsI GAAGAC 2 cut(s) 523, 1137
Bbv12I GWGCWC 1 cut(s) 432
BbvI GCAGC 5 cut(s) 650, 995, 1076, 1698, 1720
BccI CCATC 7 cut(s) 198, 493, 499, 674, 1364, 1500, 1827
BciT130I CCWGG 2 cut(s) 1163, 1592
BciVI GTATCC 2 cut(s) 291, 1340
BclI TGATCA 1 cut(s) 1818
BcnI CCSGG 2 cut(s) 668, 1264
BfaI CTAG 4 cut(s) 513, 737, 893, 1319
BfmI CTRYAG 1 cut(s) 1023
BfoI RGCGCY 1 cut(s) 1438
BfuAI ACCTGC 1 cut(s) 1016
BfuI GTATCC 2 cut(s) 291, 1340
BisI GCNGC 5 cut(s) 664, 984, 1065, 1709, 1712
BlsI GCNGC 5 cut(s) 665, 985, 1066, 1710, 1713
Bme1390I CCNGG 4 cut(s) 668, 1163, 1264, 1592
Bme18I GGWCC 2 cut(s) 48, 989
BmeT110I CYCGRG 1 cut(s) 1071
BmgBI CACGTC 1 cut(s) 1604
BmgT120I GGNCC 5 cut(s) 48, 213, 989, 1360, 1559
BmiI GGNNCC 3 cut(s) 1160, 1221, 1560
BmrFI CCNGG 4 cut(s) 668, 1163, 1264, 1592
BmsI GCATC 4 cut(s) 301, 893, 1076, 1769
BoxI GACNNNNGTC 1 cut(s) 651
BpiI GAAGAC 2 cut(s) 523, 1137
BpmI CTGGAG 1 cut(s) 141
BpuEI CTTGAG 3 cut(s) 112, 779, 1024
BpuMI CCSGG 2 cut(s) 668, 1264
BsaJI CCNNGG 4 cut(s) 328, 1106, 1162, 1590
BsaXI ACNNNNNCTCC 4 cut(s) 1349, 1379, 1599, 1629
Bsc4I CCNNNNNNNGG 4 cut(s) 556, 1502, 1556, 1834
Bse1I ACTGG 2 cut(s) 1351, 1363
Bse3DI GCAATG 3 cut(s) 398, 452, 1054
BseBI CCWGG 2 cut(s) 1163, 1592
BseDI CCNNGG 4 cut(s) 328, 1106, 1162, 1590
BseGI GGATG 1 cut(s) 1492
BseLI CCNNNNNNNGG 4 cut(s) 556, 1502, 1556, 1834
BseMI GCAATG 3 cut(s) 398, 452, 1054
BseMII CTCAG 3 cut(s) 890, 1446, 1812
BseNI ACTGG 2 cut(s) 1351, 1363
BseRI GAGGAG 1 cut(s) 311
BseXI GCAGC 5 cut(s) 650, 995, 1076, 1698, 1720
BseYI CCCAGC 1 cut(s) 1215
BsgI GTGCAG 4 cut(s) 214, 720, 981, 1697
Bsh1236I CGCG 1 cut(s) 1813
BshFI GGCC 6 cut(s) 215, 1292, 1362, 1384, 1506, 1561
BsiHKAI GWGCWC 1 cut(s) 432
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 2 cut(s) 667, 1263
BslFI GGGAC 2 cut(s) 1396, 1573
BslI CCNNNNNNNGG 4 cut(s) 556, 1502, 1556, 1834
BsmFI GGGAC 2 cut(s) 1396, 1573
BsmI GAATGC 1 cut(s) 267
BsnI GGCC 6 cut(s) 215, 1292, 1362, 1384, 1506, 1561
BsoBI CYCGRG 1 cut(s) 1071
Bsp1286I GDGCHC 2 cut(s) 158, 432
Bsp1407I TGTACA 1 cut(s) 1098
Bsp143I GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
BspACI CCGC 1 cut(s) 244
BspANI GGCC 6 cut(s) 215, 1292, 1362, 1384, 1506, 1561
BspCNI CTCAG 3 cut(s) 891, 1447, 1811
BspFNI CGCG 1 cut(s) 1813
BspLI GGNNCC 3 cut(s) 1160, 1221, 1560
BspMAI CTGCAG 1 cut(s) 1027
BspMI ACCTGC 1 cut(s) 1016
BspPI GGATC 3 cut(s) 541, 1153, 1166
BsrDI GCAATG 3 cut(s) 398, 452, 1054
BsrGI TGTACA 1 cut(s) 1098
BsrI ACTGG 2 cut(s) 1351, 1363
BssECI CCNNGG 4 cut(s) 328, 1106, 1162, 1590
BssMI GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
BssNAI GTATAC 1 cut(s) 583
BssT1I CCWWGG 2 cut(s) 328, 1106
Bst1107I GTATAC 1 cut(s) 583
Bst2UI CCWGG 2 cut(s) 1163, 1592
Bst4CI ACNGT 2 cut(s) 1103, 1631
Bst6I CTCTTC 2 cut(s) 92, 98
BstAPI GCANNNNNTGC 2 cut(s) 351, 1031
BstAUI TGTACA 1 cut(s) 1098
BstC8I GCNNGC 6 cut(s) 352, 356, 392, 396, 1239, 1472
BstF5I GGATG 1 cut(s) 1492
BstFNI CGCG 1 cut(s) 1813
BstH2I RGCGCY 1 cut(s) 1438
BstHHI GCGC 1 cut(s) 1437
BstKTI GATC 6 cut(s) 549, 841, 1161, 1408, 1743, 1821
BstMBI GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
BstMWI GCNNNNNNNGC 4 cut(s) 351, 400, 594, 1031
BstNI CCWGG 2 cut(s) 1163, 1592
BstNSI RCATGY 1 cut(s) 1280
BstPAI GACNNNNGTC 1 cut(s) 651
BstSCI CCNGG 4 cut(s) 666, 1161, 1262, 1590
BstSFI CTRYAG 1 cut(s) 1023
BstUI CGCG 1 cut(s) 1813
BstV1I GCAGC 5 cut(s) 650, 995, 1076, 1698, 1720
BstV2I GAAGAC 2 cut(s) 523, 1137
BstX2I RGATCY 2 cut(s) 546, 1158
BstXI CCANNNNNNTGG 3 cut(s) 58, 1370, 1598
BstYI RGATCY 2 cut(s) 546, 1158
BstZ17I GTATAC 1 cut(s) 583
BsuI GTATCC 2 cut(s) 291, 1340
BsuRI GGCC 6 cut(s) 215, 1292, 1362, 1384, 1506, 1561
BtgZI GCGATG 1 cut(s) 1792
BtrI CACGTC 1 cut(s) 1604
BtsCI GGATG 1 cut(s) 1492
BtsI GCAGTG 1 cut(s) 1507
BtsIMutI CAGTG 3 cut(s) 200, 1507, 1627
BveI ACCTGC 1 cut(s) 1016
Cac8I GCNNGC 6 cut(s) 352, 356, 392, 396, 1239, 1472
CaiI CAGNNNCTG 1 cut(s) 627
CfoI GCGC 1 cut(s) 1437
Cfr13I GGNCC 5 cut(s) 48, 213, 989, 1360, 1559
CseI GACGC 1 cut(s) 1802
Csp6I GTAC 3 cut(s) 147, 1099, 1763
CviQI GTAC 3 cut(s) 147, 1099, 1763
DpnI GATC 6 cut(s) 548, 840, 1160, 1407, 1742, 1820
DpnII GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
Eam1104I CTCTTC 2 cut(s) 92, 98
EarI CTCTTC 2 cut(s) 92, 98
Eco130I CCWWGG 2 cut(s) 328, 1106
Eco24I GRGCYC 1 cut(s) 158
Eco32I GATATC 1 cut(s) 1324
Eco47I GGWCC 2 cut(s) 48, 989
Eco88I CYCGRG 1 cut(s) 1071
EcoRII CCWGG 2 cut(s) 1161, 1590
EcoRV GATATC 1 cut(s) 1324
EcoT14I CCWWGG 2 cut(s) 328, 1106
EcoT22I ATGCAT 2 cut(s) 269, 908
EcoT38I GRGCYC 1 cut(s) 158
ErhI CCWWGG 2 cut(s) 328, 1106
FalI AAGNNNNNCTT 6 cut(s) 441, 473, 749, 781, 1766, 1798
FaqI GGGAC 2 cut(s) 1396, 1573
FauNDI CATATG 2 cut(s) 643, 1737
FbaI TGATCA 1 cut(s) 1818
FblI GTMKAC 1 cut(s) 582
Fnu4HI GCNGC 5 cut(s) 664, 984, 1065, 1709, 1712
FokI GGATG 1 cut(s) 1479
FriOI GRGCYC 1 cut(s) 158
Fsp4HI GCNGC 5 cut(s) 664, 984, 1065, 1709, 1712
FspBI CTAG 4 cut(s) 513, 737, 893, 1319
GlaI GCGC 1 cut(s) 1436
GluI GCNGC 5 cut(s) 664, 984, 1065, 1709, 1712
GsaI CCCAGC 1 cut(s) 1219
GsuI CTGGAG 1 cut(s) 141
HaeII RGCGCY 1 cut(s) 1438
HaeIII GGCC 6 cut(s) 215, 1292, 1362, 1384, 1506, 1561
HapII CCGG 2 cut(s) 667, 1263
HgaI GACGC 1 cut(s) 1802
HhaI GCGC 1 cut(s) 1437
Hin6I GCGC 1 cut(s) 1435
HinP1I GCGC 1 cut(s) 1435
HincII GTYRAC 2 cut(s) 226, 813
HindII GTYRAC 2 cut(s) 226, 813
HindIII AAGCTT 2 cut(s) 392, 1622
HinfI GANTC 6 cut(s) 80, 673, 1037, 1079, 1610, 1634
HpaI GTTAAC 1 cut(s) 226
HpaII CCGG 2 cut(s) 667, 1263
HphI GGTGA 6 cut(s) 29, 77, 125, 514, 1178, 1814
Hpy166II GTNNAC 3 cut(s) 226, 583, 813
Hpy188III TCNNGA 9 cut(s) 466, 569, 677, 737, 893, 1041, 1071, 1073, 1510
Hpy8I GTNNAC 3 cut(s) 226, 583, 813
HpyAV CCTTC 5 cut(s) 62, 104, 789, 1002, 1448
HpyCH4III ACNGT 2 cut(s) 1103, 1631
HpyCH4IV ACGT 2 cut(s) 405, 1603
HpyF10VI GCNNNNNNNGC 4 cut(s) 351, 400, 594, 1031
HpySE526I ACGT 2 cut(s) 405, 1603
HspAI GCGC 1 cut(s) 1435
Ksp22I TGATCA 1 cut(s) 1818
KspAI GTTAAC 1 cut(s) 226
Kzo9I GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
LmnI GCTCC 3 cut(s) 427, 538, 1594
Lsp1109I GCAGC 5 cut(s) 650, 995, 1076, 1698, 1720
LweI GCATC 4 cut(s) 301, 893, 1076, 1769
MaeI CTAG 4 cut(s) 513, 737, 893, 1319
MaeII ACGT 2 cut(s) 405, 1603
MaeIII GTNAC 1 cut(s) 1615
MalI GATC 6 cut(s) 548, 840, 1160, 1407, 1742, 1820
MboI GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
MboII GAAGA 8 cut(s) 109, 115, 151, 431, 528, 716, 962, 1142
MfeI CAATTG 2 cut(s) 303, 340
MflI RGATCY 2 cut(s) 546, 1158
MhlI GDGCHC 2 cut(s) 158, 432
MlyI GAGTC 1 cut(s) 1031
MmeI TCCRAC 2 cut(s) 537, 1147
Mph1103I ATGCAT 2 cut(s) 269, 908
MseI TTAA 8 cut(s) 168, 225, 477, 767, 1137, 1287, 1479, 1784
MslI CAYNNNNRTG 3 cut(s) 820, 1721, 1800
MspA1I CMGCKG 3 cut(s) 876, 986, 1711
MspI CCGG 2 cut(s) 667, 1263
MspR9I CCNGG 4 cut(s) 668, 1163, 1264, 1592
MunI CAATTG 2 cut(s) 303, 340
Mva1269I GAATGC 1 cut(s) 267
MvaI CCWGG 2 cut(s) 1163, 1592
MvnI CGCG 1 cut(s) 1813
MwoI GCNNNNNNNGC 4 cut(s) 351, 400, 594, 1031
NciI CCSGG 2 cut(s) 668, 1264
NdeI CATATG 2 cut(s) 643, 1737
NdeII GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
NlaIV GGNNCC 3 cut(s) 1160, 1221, 1560
NsiI ATGCAT 2 cut(s) 269, 908
NspI RCATGY 1 cut(s) 1280
OliI CACNNNNGTG 1 cut(s) 1800
PaeR7I CTCGAG 1 cut(s) 1071
PaqCI CACCTGC 1 cut(s) 1016
PciI ACATGT 1 cut(s) 1276
PctI GAATGC 1 cut(s) 267
PfeI GAWTC 5 cut(s) 80, 673, 1079, 1610, 1634
PkrI GCNGC 5 cut(s) 665, 985, 1066, 1710, 1713
PleI GAGTC 1 cut(s) 1031
PpsI GAGTC 1 cut(s) 1031
PscI ACATGT 1 cut(s) 1276
PshAI GACNNNNGTC 1 cut(s) 651
Psp6I CCWGG 2 cut(s) 1161, 1590
PspFI CCCAGC 1 cut(s) 1215
PspGI CCWGG 2 cut(s) 1161, 1590
PspN4I GGNNCC 3 cut(s) 1160, 1221, 1560
PspPI GGNCC 5 cut(s) 48, 213, 989, 1360, 1559
PstI CTGCAG 1 cut(s) 1027
PstNI CAGNNNCTG 1 cut(s) 627
PsuI RGATCY 2 cut(s) 546, 1158
PvuII CAGCTG 3 cut(s) 876, 986, 1711
RsaI GTAC 3 cut(s) 148, 1100, 1764
RsaNI GTAC 3 cut(s) 147, 1099, 1763
RseI CAYNNNNRTG 3 cut(s) 820, 1721, 1800
SaqAI TTAA 8 cut(s) 168, 225, 477, 767, 1137, 1287, 1479, 1784
SatI GCNGC 5 cut(s) 664, 984, 1065, 1709, 1712
Sau3AI GATC 6 cut(s) 546, 838, 1158, 1405, 1740, 1818
Sau96I GGNCC 5 cut(s) 48, 213, 989, 1360, 1559
SchI GAGTC 1 cut(s) 1031
ScrFI CCNGG 4 cut(s) 668, 1163, 1264, 1592
SduI GDGCHC 2 cut(s) 158, 432
SfaNI GCATC 4 cut(s) 301, 893, 1076, 1769
SfcI CTRYAG 1 cut(s) 1023
Sfr274I CTCGAG 1 cut(s) 1071
SinI GGWCC 2 cut(s) 48, 989
SlaI CTCGAG 1 cut(s) 1071
SmiMI CAYNNNNRTG 3 cut(s) 820, 1721, 1800
SmlI CTYRAG 4 cut(s) 91, 794, 1039, 1071
SmoI CTYRAG 4 cut(s) 91, 794, 1039, 1071
SsiI CCGC 1 cut(s) 244
SspMI CTAG 4 cut(s) 513, 737, 893, 1319
StyD4I CCNGG 4 cut(s) 666, 1161, 1262, 1590
StyI CCWWGG 2 cut(s) 328, 1106
TaaI ACNGT 2 cut(s) 1103, 1631
TaiI ACGT 2 cut(s) 408, 1606
TaqI TCGA 3 cut(s) 676, 841, 1072
TatI WGTACW 3 cut(s) 146, 1098, 1762
TfiI GAWTC 5 cut(s) 80, 673, 1079, 1610, 1634
Tru1I TTAA 8 cut(s) 168, 225, 477, 767, 1137, 1287, 1479, 1784
Tru9I TTAA 8 cut(s) 168, 225, 477, 767, 1137, 1287, 1479, 1784
TscAI CASTG 3 cut(s) 200, 1507, 1634
TseI GCWGC 5 cut(s) 663, 983, 1064, 1708, 1711
TspDTI ATGAA 8 cut(s) 381, 432, 498, 630, 999, 1065, 1143, 1626
TspRI CASTG 3 cut(s) 200, 1507, 1634
VpaK11BI GGWCC 2 cut(s) 48, 989
XapI RAATTY 1 cut(s) 1283
XbaI TCTAGA 2 cut(s) 736, 892
XceI RCATGY 1 cut(s) 1280
XcmI CCANNNNNNNNNTGG 4 cut(s) 1230, 1300, 1343, 1499
XhoI CTCGAG 1 cut(s) 1071
XmiI GTMKAC 1 cut(s) 582
XspI CTAG 4 cut(s) 513, 737, 893, 1319
Zsp2I ATGCAT 2 cut(s) 269, 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.