FvH4_5g24640

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000280
Physical Location & Seq
Forward (+)
16005670 .. 16013810
8141 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g24640.t1

Sequence Viewer

Length: 1866 bp
ATGGAGGCAGAGGAAAATGGTGGTAAGTCTGTGAAGAAGCGTGGCGGTGGAGGTAGGAAAAAGGTGGTGATTGTGAAGGAAGAGGAGAAGAAAGGTGAATTGGAAGTGAAGGGGGACAAGAAACGCGGTAGGAAGCGTGCGAAAACTGAAGAAGAAGAAGAAGAAGGTGGGAAGAATAAGGTACGTTGTTCGTTTAGGCGTCTGAGGGAGCAGGGACATCTATCCGTGGAGGAGCGTAAAAAGTGGATTGAGGAGGTGTCCATGATGTGCCACCAATGTCAGAGGAGTGATAAGGGGAGCGTTGTTCGGTGCAAAAAGTGCAAGACAAAGCGATATTGTGTTCCTTGCATAGAGAATTGGTATCCACATATATCAGAGGATGCCATTGCTGAGGCTTGTCCTTTTTGCTGTGGAAATTGCAATTGCAAAGCATGCTTGCGCTTAGATATACCTGTTAAGAATTTGAAGAACCAAGAATTAGTACTTGACAAAGATGCAAGAGTTGAACACTCTAAGTACTTAATTCATGCACTGCTTCCATCCTTGAAAAGAATTCATGATGAACCAAAGAGTGAGATGGCAGAAGAGGCAAGGAGCAAAGGAATATCCGACTCTGAGCTCCAGATACCAAAGTCTGATTGCGCTGCTGATGTTCGCGCGGATGTCAATATCCACTGGTTTTTTACTGGATACTCGAAGGGATGGTTTGATCTAAAGCATTGGCCTCAGATATTGAAACTGAAAGACTGGCCACCAACTAATTTATTTGAGGAGCGCCTTCCTCGTCATGGTGCTGAGTTCATTAGTTGTCTGCCATATAAGGAATATACTCATCCTCGCAATGGTCCTCTGAACCTTTTTGCCAAATCACCTTCCAAATGTGTAAAACCAGACATGGGACCAAAGACATATATTGCTTATGGTTTTTCACAGGAGCTTGGACGTGGAGATTCTGTAACCAAACTTCATTGTGATATGTCCGATGCGGTGAATATTTTGACACATACCACTGAAGTGAACCTTACTCCCGAGCAACTTACTGTCATTGAAAAGTTGAAAAAGAAGAATGCTCTTCAAGACCAAAGAGAAATTTTTGGCAATTGTAATATTGTTGATGATAATATTGATAGTGACAAGGCTGGTGGTGATTCTTTCTTCAGTGCTGCTGATGATAAACAACCTTTTGATGAAGTTGAAAGTAATAGCATTGGTGTAGCTGTTTCAGAACTAGTTAATCCAATTGTTCCACATGTTGGAGATGCTTCAATGGAATCTGAGTCTGGATCTGAAAAGAATGAAGAGGCAGGATTAGAAAGTGATATCAGTGGTGACATTCCTGTAACAAATTATGGAAATAAGTTGAAAGAGTCAGATGTCACTGAGGGAGGTGCTTTATGGGACATATTCCGTAGACAGGATGTTCCTAAGCTGCAGGTGTATCTCATGAAGCATTTCAAGGAATTCAGGCACATACACTGTTGCCCAGTGCAGCAGGTTGTCCATCCCATACACGATCAGACATTTTATCTTACAGTGCAGCACAAAAAGATGCTTAAAGAGGAATATGGAATCGAACCGTGGACCTTCATTCAAAAACTTGGAGATGCTGTCTTTATTCCTGCAGGATGTCCGCATCAAGTCAGAAACTTGAAGTCTTGCATCAAAGTTGCAATGGATTTTGTCTCCCCTGAAAATGTCGGCGAGTGCTTTCACTTGACAGAAGTATTCCGCACACTTCCAGAAGATCATAGAGCTAAAGAGGACAAATTGGAGGTAAAGAAAATGATTCTTCATTCCGTCACTGATGCTCTGAAGGAACTTGATCAGATTCTGAGATCTGAGGAAGACACTAGCCGACCGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

622

Amino Acids

70.65

Weight (kDa)

6.39

Isoelectric Point (pI)

55.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 491 - 560 2.3e-14 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1423
Acc36I ACCTGC 2 cut(s) 1423, 1483
AccB7I CCANNNNNTGG 1 cut(s) 1253
AccI GTMKAC 1 cut(s) 1411
AccII CGCG 3 cut(s) 126, 657, 659
AciI CCGC 6 cut(s) 45, 126, 659, 986, 1631, 1729
AclWI GGATC 1 cut(s) 1291
AcoI YGGCCR 1 cut(s) 749
AcsI RAATTY 4 cut(s) 460, 552, 1089, 1460
AcuI CTGAAG 4 cut(s) 168, 1032, 1141, 1832
AcyI GRCGYC 1 cut(s) 199
AfaI GTAC 3 cut(s) 183, 483, 518
AfiI CCNNNNNNNGG 5 cut(s) 788, 842, 896, 1253, 1414
AflIII ACRYGT 1 cut(s) 1249
AhlI ACTAGT 1 cut(s) 1228
AjiI CACGTC 1 cut(s) 944
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AleI CACNNNNGTG 1 cut(s) 1013
AluBI AGCT 5 cut(s) 619, 937, 1217, 1429, 1754
AluI AGCT 5 cut(s) 619, 937, 1217, 1429, 1754
Alw21I GWGCWC 1 cut(s) 621
Alw26I GTCTC 1 cut(s) 1687
AlwI GGATC 1 cut(s) 1291
AlwNI CAGNNNCTG 1 cut(s) 1831
Ama87I CYCGRG 1 cut(s) 1028
AoxI GGCC 2 cut(s) 722, 749
ApeKI GCWGC 5 cut(s) 644, 1163, 1429, 1489, 1537
ApoI RAATTY 4 cut(s) 460, 552, 1089, 1460
Asp700I GAANNNNTTC 1 cut(s) 1451
AspLEI GCGC 4 cut(s) 441, 644, 659, 777
AspS9I GGNCC 3 cut(s) 845, 899, 1581
AsuHPI GGTGA 6 cut(s) 79, 107, 861, 1000, 1157, 1340
AvaI CYCGRG 1 cut(s) 1028
AvaII GGWCC 3 cut(s) 845, 899, 1581
BaeI ACNNNNGTAYC 2 cut(s) 617, 650
BalI TGGCCA 1 cut(s) 751
BanII GRGCYC 1 cut(s) 621
BarI GAAGNNNNNNTAC 2 cut(s) 948, 980
BbsI GAAGAC 1 cut(s) 1851
Bbv12I GWGCWC 1 cut(s) 621
BbvCI CCTCAGC 1 cut(s) 390
BbvI GCAGC 5 cut(s) 631, 1150, 1416, 1501, 1549
BccI CCATC 4 cut(s) 547, 571, 696, 1509
BciVI GTATCC 2 cut(s) 372, 683
BclI TGATCA 1 cut(s) 1822
BcoDI GTCTC 1 cut(s) 1687
BcuI ACTAGT 1 cut(s) 1228
BfaI CTAG 2 cut(s) 1229, 1851
BfmI CTRYAG 2 cut(s) 1430, 1620
BfoI RGCGCY 1 cut(s) 778
BfuAI ACCTGC 2 cut(s) 1423, 1483
BfuI GTATCC 2 cut(s) 372, 683
BglII AGATCT 1 cut(s) 1835
BisI GCNGC 5 cut(s) 645, 1164, 1430, 1490, 1538
BlsI GCNGC 5 cut(s) 646, 1165, 1431, 1491, 1539
BmcAI AGTACT 2 cut(s) 483, 518
Bme18I GGWCC 3 cut(s) 845, 899, 1581
BmeT110I CYCGRG 1 cut(s) 1028
BmgBI CACGTC 1 cut(s) 944
BmgT120I GGNCC 3 cut(s) 845, 899, 1581
BmiI GGNNCC 1 cut(s) 900
BmrI ACTGGG 1 cut(s) 1478
BmsI GCATC 9 cut(s) 370, 484, 973, 1249, 1539, 1594, 1642, 1668, 1795
BmuI ACTGGG 1 cut(s) 1478
BpiI GAAGAC 1 cut(s) 1851
BpmI CTGGAG 1 cut(s) 605
Bpu10I CCTNAGC 2 cut(s) 390, 1425
BsaHI GRCGYC 1 cut(s) 199
BsaJI CCNNGG 2 cut(s) 225, 1577
BsaXI ACNNNNNCTCC 4 cut(s) 939, 969, 1593, 1623
Bsc4I CCNNNNNNNGG 5 cut(s) 788, 842, 896, 1253, 1414
Bse1I ACTGG 4 cut(s) 680, 691, 752, 1484
Bse3DI GCAATG 3 cut(s) 384, 847, 1677
BseDI CCNNGG 2 cut(s) 225, 1577
BseGI GGATG 8 cut(s) 385, 539, 667, 707, 832, 1423, 1501, 1631
BseLI CCNNNNNNNGG 5 cut(s) 788, 842, 896, 1253, 1414
BseMI GCAATG 3 cut(s) 384, 847, 1677
BseMII CTCAG 9 cut(s) 194, 381, 606, 740, 786, 1266, 1371, 1823, 1830
BseNI ACTGG 4 cut(s) 680, 691, 752, 1484
BseRI GAGGAG 5 cut(s) 98, 245, 266, 298, 785
BseXI GCAGC 5 cut(s) 631, 1150, 1416, 1501, 1549
BsgI GTGCAG 2 cut(s) 1508, 1556
Bsh1236I CGCG 3 cut(s) 126, 657, 659
Bsh1285I CGRYCG 1 cut(s) 1859
BshFI GGCC 2 cut(s) 724, 751
BsiEI CGRYCG 1 cut(s) 1859
BsiHKAI GWGCWC 1 cut(s) 621
BsiHKCI CYCGRG 1 cut(s) 1028
BslFI GGGAC 4 cut(s) 128, 228, 912, 1412
BslI CCNNNNNNNGG 5 cut(s) 788, 842, 896, 1253, 1414
BsmAI GTCTC 1 cut(s) 1687
BsmFI GGGAC 4 cut(s) 128, 228, 912, 1412
BsmI GAATGC 1 cut(s) 1072
BsnI GGCC 2 cut(s) 724, 751
BsoBI CYCGRG 1 cut(s) 1028
Bsp1286I GDGCHC 1 cut(s) 621
Bsp143I GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
BspACI CCGC 6 cut(s) 45, 126, 659, 986, 1631, 1729
BspANI GGCC 2 cut(s) 724, 751
BspCNI CTCAG 9 cut(s) 195, 382, 607, 739, 787, 1267, 1372, 1824, 1831
BspFNI CGCG 3 cut(s) 126, 657, 659
BspHI TCATGA 2 cut(s) 556, 1443
BspLI GGNNCC 1 cut(s) 900
BspMAI CTGCAG 2 cut(s) 1434, 1624
BspMI ACCTGC 2 cut(s) 1423, 1483
BspPI GGATC 1 cut(s) 1291
BspQI GCTCTTC 1 cut(s) 1077
BsrDI GCAATG 3 cut(s) 384, 847, 1677
BsrI ACTGG 4 cut(s) 680, 691, 752, 1484
BssECI CCNNGG 2 cut(s) 225, 1577
BssMI GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
BssNI GRCGYC 1 cut(s) 199
Bst4CI ACNGT 4 cut(s) 1042, 1478, 1534, 1578
Bst6I CTCTTC 4 cut(s) 75, 579, 1077, 1293
BstACI GRCGYC 1 cut(s) 199
BstAPI GCANNNNNTGC 2 cut(s) 318, 432
BstC8I GCNNGC 3 cut(s) 138, 433, 437
BstDSI CCRYGG 2 cut(s) 225, 1577
BstF5I GGATG 8 cut(s) 385, 539, 667, 707, 832, 1423, 1501, 1631
BstFNI CGCG 3 cut(s) 126, 657, 659
BstH2I RGCGCY 1 cut(s) 778
BstHHI GCGC 4 cut(s) 441, 644, 659, 777
BstKTI GATC 6 cut(s) 712, 1286, 1516, 1747, 1825, 1838
BstMAI GTCTC 1 cut(s) 1687
BstMBI GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
BstMCI CGRYCG 1 cut(s) 1859
BstMWI GCNNNNNNNGC 3 cut(s) 318, 432, 587
BstNSI RCATGY 2 cut(s) 435, 1253
BstSFI CTRYAG 2 cut(s) 1430, 1620
BstUI CGCG 3 cut(s) 126, 657, 659
BstV1I GCAGC 5 cut(s) 631, 1150, 1416, 1501, 1549
BstV2I GAAGAC 1 cut(s) 1851
BstX2I RGATCY 2 cut(s) 1283, 1835
BstYI RGATCY 2 cut(s) 1283, 1835
BsuI GTATCC 2 cut(s) 372, 683
BsuRI GGCC 2 cut(s) 724, 751
BtgI CCRYGG 2 cut(s) 225, 1577
BtrI CACGTC 1 cut(s) 944
BtsCI GGATG 8 cut(s) 385, 539, 667, 707, 832, 1423, 1501, 1631
BtsI GCAGTG 1 cut(s) 530
BveI ACCTGC 2 cut(s) 1423, 1483
Cac8I GCNNGC 3 cut(s) 138, 433, 437
CaiI CAGNNNCTG 1 cut(s) 1831
CciI TCATGA 2 cut(s) 556, 1443
CfoI GCGC 4 cut(s) 441, 644, 659, 777
Cfr13I GGNCC 3 cut(s) 845, 899, 1581
CseI GACGC 1 cut(s) 188
Csp6I GTAC 3 cut(s) 182, 482, 517
CspCI CAANNNNNGTGG 2 cut(s) 1123, 1158
CviAII CATG 8 cut(s) 262, 432, 527, 557, 788, 895, 1250, 1444
CviQI GTAC 3 cut(s) 182, 482, 517
DpnI GATC 6 cut(s) 711, 1285, 1515, 1746, 1824, 1837
DpnII GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
EaeI YGGCCR 1 cut(s) 749
Eam1104I CTCTTC 4 cut(s) 75, 579, 1077, 1293
EarI CTCTTC 4 cut(s) 75, 579, 1077, 1293
Ecl136II GAGCTC 1 cut(s) 619
Eco24I GRGCYC 1 cut(s) 621
Eco32I GATATC 1 cut(s) 1321
Eco47I GGWCC 3 cut(s) 845, 899, 1581
Eco53kI GAGCTC 1 cut(s) 619
Eco57I CTGAAG 4 cut(s) 168, 1032, 1141, 1832
Eco88I CYCGRG 1 cut(s) 1028
EcoICRI GAGCTC 1 cut(s) 619
EcoRI GAATTC 2 cut(s) 552, 1460
EcoRV GATATC 1 cut(s) 1321
EcoT38I GRGCYC 1 cut(s) 621
FaeI CATG 8 cut(s) 265, 435, 530, 560, 791, 898, 1253, 1447
FalI AAGNNNNNCTT 2 cut(s) 1005, 1037
FaqI GGGAC 4 cut(s) 128, 228, 912, 1412
FatI CATG 8 cut(s) 261, 431, 526, 556, 787, 894, 1249, 1443
FbaI TGATCA 1 cut(s) 1822
FblI GTMKAC 1 cut(s) 1411
Fnu4HI GCNGC 5 cut(s) 645, 1164, 1430, 1490, 1538
FokI GGATG 8 cut(s) 392, 526, 674, 714, 819, 1430, 1488, 1638
FriOI GRGCYC 1 cut(s) 621
Fsp4HI GCNGC 5 cut(s) 645, 1164, 1430, 1490, 1538
FspBI CTAG 2 cut(s) 1229, 1851
GlaI GCGC 4 cut(s) 440, 643, 658, 776
GluI GCNGC 5 cut(s) 645, 1164, 1430, 1490, 1538
GsuI CTGGAG 1 cut(s) 605
HaeII RGCGCY 1 cut(s) 778
HaeIII GGCC 2 cut(s) 724, 751
HgaI GACGC 1 cut(s) 188
HhaI GCGC 4 cut(s) 441, 644, 659, 777
Hin1I GRCGYC 1 cut(s) 199
Hin1II CATG 8 cut(s) 265, 435, 530, 560, 791, 898, 1253, 1447
Hin6I GCGC 4 cut(s) 439, 642, 657, 775
HinP1I GCGC 4 cut(s) 439, 642, 657, 775
HinfI GANTC 9 cut(s) 611, 950, 1148, 1271, 1277, 1367, 1569, 1786, 1828
HphI GGTGA 6 cut(s) 79, 107, 861, 1000, 1157, 1340
Hpy166II GTNNAC 3 cut(s) 1018, 1412, 1581
Hpy188III TCNNGA 7 cut(s) 557, 622, 1028, 1076, 1281, 1444, 1739
Hpy8I GTNNAC 3 cut(s) 1018, 1412, 1581
HpyAV CCTTC 8 cut(s) 70, 103, 158, 691, 788, 882, 1594, 1807
HpyCH4III ACNGT 4 cut(s) 1042, 1478, 1534, 1578
HpyCH4IV ACGT 2 cut(s) 184, 943
HpyF10VI GCNNNNNNNGC 3 cut(s) 318, 432, 587
HpySE526I ACGT 2 cut(s) 184, 943
Hsp92I GRCGYC 1 cut(s) 199
Hsp92II CATG 8 cut(s) 265, 435, 530, 560, 791, 898, 1253, 1447
HspAI GCGC 4 cut(s) 439, 642, 657, 775
Ksp22I TGATCA 1 cut(s) 1822
Kzo9I GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
LguI GCTCTTC 1 cut(s) 1077
LmnI GCTCC 7 cut(s) 208, 232, 297, 594, 624, 772, 934
Lsp1109I GCAGC 5 cut(s) 631, 1150, 1416, 1501, 1549
LweI GCATC 9 cut(s) 370, 484, 973, 1249, 1539, 1594, 1642, 1668, 1795
MaeI CTAG 2 cut(s) 1229, 1851
MaeII ACGT 2 cut(s) 184, 943
MaeIII GTNAC 6 cut(s) 955, 1130, 1328, 1339, 1375, 1798
MalI GATC 6 cut(s) 711, 1285, 1515, 1746, 1824, 1837
MboI GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
MfeI CAATTG 3 cut(s) 421, 1099, 1239
MflI RGATCY 2 cut(s) 1283, 1835
MhlI GDGCHC 1 cut(s) 621
MlsI TGGCCA 1 cut(s) 751
MluNI TGGCCA 1 cut(s) 751
MlyI GAGTC 3 cut(s) 605, 1286, 1376
MmeI TCCRAC 2 cut(s) 633, 1234
Mox20I TGGCCA 1 cut(s) 751
MroXI GAANNNNTTC 1 cut(s) 1451
MscI TGGCCA 1 cut(s) 751
MseI TTAA 5 cut(s) 456, 521, 1233, 1554, 1864
MslI CAYNNNNRTG 1 cut(s) 1013
Msp20I TGGCCA 1 cut(s) 751
MunI CAATTG 3 cut(s) 421, 1099, 1239
Mva1269I GAATGC 1 cut(s) 1072
MvnI CGCG 3 cut(s) 126, 657, 659
MwoI GCNNNNNNNGC 3 cut(s) 318, 432, 587
NdeII GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
NlaIII CATG 8 cut(s) 265, 435, 530, 560, 791, 898, 1253, 1447
NlaIV GGNNCC 1 cut(s) 900
NmuCI GTSAC 4 cut(s) 1130, 1328, 1375, 1798
NspI RCATGY 2 cut(s) 435, 1253
OliI CACNNNNGTG 1 cut(s) 1013
PaeI GCATGC 1 cut(s) 435
PagI TCATGA 2 cut(s) 556, 1443
PaqCI CACCTGC 1 cut(s) 1423
PciI ACATGT 1 cut(s) 1249
PciSI GCTCTTC 1 cut(s) 1077
PctI GAATGC 1 cut(s) 1072
PdmI GAANNNNTTC 1 cut(s) 1451
PfeI GAWTC 6 cut(s) 950, 1148, 1271, 1569, 1786, 1828
PflMI CCANNNNNTGG 1 cut(s) 1253
PkrI GCNGC 5 cut(s) 646, 1165, 1431, 1491, 1539
PleI GAGTC 3 cut(s) 605, 1285, 1375
PpsI GAGTC 3 cut(s) 605, 1285, 1375
PscI ACATGT 1 cut(s) 1249
Psp124BI GAGCTC 1 cut(s) 621
PspN4I GGNNCC 1 cut(s) 900
PspPI GGNCC 3 cut(s) 845, 899, 1581
PstI CTGCAG 2 cut(s) 1434, 1624
PstNI CAGNNNCTG 1 cut(s) 1831
PsuI RGATCY 2 cut(s) 1283, 1835
RsaI GTAC 3 cut(s) 183, 483, 518
RsaNI GTAC 3 cut(s) 182, 482, 517
RseI CAYNNNNRTG 1 cut(s) 1013
SacI GAGCTC 1 cut(s) 621
SapI GCTCTTC 1 cut(s) 1077
SaqAI TTAA 5 cut(s) 456, 521, 1233, 1554, 1864
SatI GCNGC 5 cut(s) 645, 1164, 1430, 1490, 1538
Sau3AI GATC 6 cut(s) 709, 1283, 1513, 1744, 1822, 1835
Sau96I GGNCC 3 cut(s) 845, 899, 1581
SbfI CCTGCAGG 1 cut(s) 1624
ScaI AGTACT 2 cut(s) 483, 518
SchI GAGTC 3 cut(s) 605, 1286, 1376
SdaI CCTGCAGG 1 cut(s) 1624
SduI GDGCHC 1 cut(s) 621
SfaNI GCATC 9 cut(s) 370, 484, 973, 1249, 1539, 1594, 1642, 1668, 1795
SfcI CTRYAG 2 cut(s) 1430, 1620
SinI GGWCC 3 cut(s) 845, 899, 1581
SmiMI CAYNNNNRTG 1 cut(s) 1013
SpeI ACTAGT 1 cut(s) 1228
SphI GCATGC 1 cut(s) 435
Sse8387I CCTGCAGG 1 cut(s) 1624
SsiI CCGC 6 cut(s) 45, 126, 659, 986, 1631, 1729
SspI AATATT 3 cut(s) 994, 1108, 1123
SspMI CTAG 2 cut(s) 1229, 1851
SstI GAGCTC 1 cut(s) 621
TaaI ACNGT 4 cut(s) 1042, 1478, 1534, 1578
TaiI ACGT 2 cut(s) 187, 946
TaqI TCGA 2 cut(s) 695, 1572
TatI WGTACW 2 cut(s) 481, 516
TfiI GAWTC 6 cut(s) 950, 1148, 1271, 1569, 1786, 1828
Tru1I TTAA 5 cut(s) 456, 521, 1233, 1554, 1864
Tru9I TTAA 5 cut(s) 456, 521, 1233, 1554, 1864
TseFI GTSAC 4 cut(s) 1130, 1328, 1375, 1798
TseI GCWGC 5 cut(s) 644, 1163, 1429, 1489, 1537
Tsp45I GTSAC 4 cut(s) 1130, 1328, 1375, 1798
TspGWI ACGGA 3 cut(s) 214, 1397, 1786
Van91I CCANNNNNTGG 1 cut(s) 1253
VpaK11BI GGWCC 3 cut(s) 845, 899, 1581
XapI RAATTY 4 cut(s) 460, 552, 1089, 1460
XceI RCATGY 2 cut(s) 435, 1253
XmiI GTMKAC 1 cut(s) 1411
XmnI GAANNNNTTC 1 cut(s) 1451
XspI CTAG 2 cut(s) 1229, 1851
ZrmI AGTACT 2 cut(s) 483, 518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.