Rmu_co8460737.1_g000001

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8460737.1
OG0000280
Physical Location & Seq
Forward (+)
1 .. 1839
1839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8460737.1_g000001.1.cds

Sequence Viewer

Length: 1839 bp
cttatgggacattttccggatccaggatgttccgcagctggagaaatacatccacaagcacgtcaatgaatttatgcatgtgctctgtaatcctttgcagcatgttactcatgctatacatgatcagactgtttatctcactgtagagcacaagaggaagctcaaggaggaatttggtatcgagccgtggacatttgttcaaagacttggagatgctgttttcattcctgcaggttgtcctcatcaggtgaggaacttgaagtcttgtttcaaagttgcactggactttgtttcccctgagaatgtgggtgagtgctttcgtttgacggaagagtttcgcacacttccgacaaaccacagcgccagtgaggacaagctggaggtgaagaaaatgattgtgcatgctgtttgtgaagctattaaggagatttctggtgagaatgtgatggtaaagagggcaagggatgtgaaggcaaagagggcaagggctctgaaggcagagagggcaagggctctgaaggcaaagagggcaagggctcccttggacgtgtcaacaatttgccatcagtgtcagagaaatgttaagggaagagtggtgtggtgcacaaggtgtgcgaggaagaggtattgtattccttgcatacagagatggtatccgaacacatcagaggaagccattgctaaggcttgtcctgtgtgccgtggcaactgcaactgcacagcctgccttcgattggatgtggctgtcaggcgttggcagaatctagacccaaaaatcgacaagggtaccaagctggagcactgtaagtacttggttcatcagctgcttccctatttgaagaggattagggatgagcaggtgattgagatgctgatcgaggctaagaggcagggattacgtgatgtttcggaggtcaaggtggagaaggctaattgcggtgaagatgagcgtatgtactgcaacaactgcagcacttcgatttttgattttcataggagttgtcctgagtgtgagtatgatctgtgcctcagttgctgccgggagattcgagatggcaggtggaagaagagagggatggaggagaaagctcaagtgtccacatttgagtggagagcaagtgaagatggaagcattctctggacacatatgaaatgctgtggtaagcataaattagaattgaaatgcaaattttctcagaatcatgtcatagaattggtagagaaagcaggaaaaatagatgaaagttacagtcatttgcgtgctagtagtgaaacacctgcacacaagtgttcatgtgttaaacctgtggatgatgccattagctcaagtagcagctgctctatgttaaggaaagcagcttctagagatggttctgatgataactacttgttctgtccaagggttggacaaatccaagataaggattttgggcattttcagtggcattggatgaggggtgagcctgtgatcgttagcaatacacttgaaaatggatcaggtttaagctgggaaccatctgtcatgtggcgggcatttagaaagataaagaagatcaagcatgatagtgaattgacagtccacgccattgattgctgggattggtgttttatagaaatcaacatcctccatttctttagtggatattccaacggacggtgttataagacaggatggcctcagaatctcaagctcaatgacttcccatcatctgctgagtttcacaatcggcttccccggcatgttaaggaatttttatcttgtctgcctttcaaggagtatactcaccccaacaagggaactctgaaccttgctatctacttgccacctacctcagtaaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

612

Amino Acids

70.88

Weight (kDa)

8.84

Isoelectric Point (pI)

50.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1663
AarI CACCTGC 3 cut(s) 848, 1048, 1286
Acc36I ACCTGC 4 cut(s) 222, 848, 1048, 1286
Acc65I GGTACC 1 cut(s) 786
AccB1I GGYRCC 1 cut(s) 786
AccB7I CCANNNNNTGG 1 cut(s) 1404
AccI GTMKAC 1 cut(s) 1779
AccIII TCCGGA 1 cut(s) 16
AciI CCGC 3 cut(s) 33, 937, 1529
AclWI GGATC 3 cut(s) 14, 27, 1502
AcsI RAATTY 4 cut(s) 69, 171, 1188, 1749
AcuI CTGAAG 2 cut(s) 513, 537
AdeI CACNNNGTG 1 cut(s) 610
AfaI GTAC 3 cut(s) 788, 810, 957
AfiI CCNNNNNNNGG 7 cut(s) 23, 734, 1404, 1421, 1654, 1793, 1794
AflIII ACRYGT 1 cut(s) 547
AgsI TTSAA 7 cut(s) 201, 260, 272, 839, 1181, 1488, 1772
AjiI CACGTC 2 cut(s) 62, 548
AjnI CCWGG 1 cut(s) 22
AleI CACNNNNGTG 1 cut(s) 1286
Alw21I GWGCWC 4 cut(s) 85, 151, 606, 802
Alw44I GTGCAC 1 cut(s) 602
AlwI GGATC 3 cut(s) 14, 27, 1502
AlwNI CAGNNNCTG 1 cut(s) 1036
Aor13HI TCCGGA 1 cut(s) 16
AoxI GGCC 1 cut(s) 1674
ApaLI GTGCAC 1 cut(s) 602
ApeKI GCWGC 8 cut(s) 35, 98, 824, 970, 1036, 1333, 1336, 1356
ApoI RAATTY 4 cut(s) 69, 171, 1188, 1749
Asp700I GAANNNNTTC 1 cut(s) 334
Asp718I GGTACC 1 cut(s) 786
AspLEI GCGC 1 cut(s) 363
AsuC2I CCSGG 2 cut(s) 1041, 1736
AsuHPI GGTGA 8 cut(s) 260, 321, 395, 447, 872, 951, 1470, 1776
BaeGI GKGCMC 1 cut(s) 606
BaeI ACNNNNGTAYC 2 cut(s) 770, 803
BamHI GGATCC 1 cut(s) 19
BanI GGYRCC 1 cut(s) 786
BanII GRGCYC 3 cut(s) 491, 515, 539
Bbv12I GWGCWC 4 cut(s) 85, 151, 606, 802
BbvI GCAGC 8 cut(s) 47, 110, 811, 982, 1023, 1323, 1345, 1368
BceAI ACGGC 2 cut(s) 170, 685
BciT130I CCWGG 1 cut(s) 24
BciVI GTATCC 1 cut(s) 664
BclI TGATCA 1 cut(s) 122
BcnI CCSGG 2 cut(s) 1041, 1736
BfaI CTAG 3 cut(s) 765, 1264, 1363
BfmI CTRYAG 3 cut(s) 142, 229, 968
BfoI RGCGCY 1 cut(s) 364
BfuAI ACCTGC 4 cut(s) 222, 848, 1048, 1286
BfuI GTATCC 1 cut(s) 664
BisI GCNGC 8 cut(s) 36, 99, 825, 971, 1037, 1334, 1337, 1357
BlsI GCNGC 8 cut(s) 37, 100, 826, 972, 1038, 1335, 1338, 1358
BmcAI AGTACT 1 cut(s) 810
Bme1390I CCNGG 3 cut(s) 24, 1041, 1736
BmgBI CACGTC 2 cut(s) 62, 548
BmiI GGNNCC 4 cut(s) 21, 538, 788, 1513
BmrFI CCNGG 3 cut(s) 24, 1041, 1736
BmsI GCATC 3 cut(s) 203, 859, 1304
BpmI CTGGAG 3 cut(s) 60, 399, 816
Bpu10I CCTNAGC 1 cut(s) 682
BpuEI CTTGAG 4 cut(s) 147, 1075, 1310, 1671
BpuMI CCSGG 2 cut(s) 1041, 1736
BsaAI YACGTR 1 cut(s) 900
BsaBI GATNNNNATC 1 cut(s) 873
BsaJI CCNNGG 5 cut(s) 186, 541, 701, 1398, 1734
BsaWI WCCGGW 1 cut(s) 16
BsaXI ACNNNNNCTCC 4 cut(s) 202, 232, 1103, 1133
Bsc4I CCNNNNNNNGG 7 cut(s) 23, 734, 1404, 1421, 1654, 1793, 1794
Bse1I ACTGG 2 cut(s) 286, 364
Bse3DI GCAATG 1 cut(s) 676
Bse8I GATNNNNATC 1 cut(s) 873
BseAI TCCGGA 1 cut(s) 16
BseBI CCWGG 1 cut(s) 24
BseDI CCNNGG 5 cut(s) 186, 541, 701, 1398, 1734
BseJI GATNNNNATC 1 cut(s) 873
BseLI CCNNNNNNNGG 7 cut(s) 23, 734, 1404, 1421, 1654, 1793, 1794
BseMI GCAATG 1 cut(s) 676
BseMII CTCAG 6 cut(s) 289, 997, 1043, 1209, 1692, 1705
BseNI ACTGG 2 cut(s) 286, 364
BseRI GAGGAG 1 cut(s) 1095
BseSI GKGCMC 1 cut(s) 606
BseXI GCAGC 8 cut(s) 47, 110, 811, 982, 1023, 1323, 1345, 1368
BseYI CCCAGC 2 cut(s) 1507, 1594
BsgI GTGCAG 2 cut(s) 701, 1264
BshFI GGCC 1 cut(s) 1676
BshNI GGYRCC 1 cut(s) 786
BsiHKAI GWGCWC 4 cut(s) 85, 151, 606, 802
BsiSI CCGG 3 cut(s) 17, 1040, 1736
BslFI GGGAC 1 cut(s) 21
BslI CCNNNNNNNGG 7 cut(s) 23, 734, 1404, 1421, 1654, 1793, 1794
BsmFI GGGAC 1 cut(s) 21
BsmI GAATGC 1 cut(s) 1132
BsnI GGCC 1 cut(s) 1676
Bsp1286I GDGCHC 7 cut(s) 85, 151, 491, 515, 539, 606, 802
Bsp13I TCCGGA 1 cut(s) 16
Bsp143I GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
BspACI CCGC 3 cut(s) 33, 937, 1529
BspANI GGCC 1 cut(s) 1676
BspCNI CTCAG 6 cut(s) 290, 998, 1042, 1208, 1691, 1706
BspEI TCCGGA 1 cut(s) 16
BspLI GGNNCC 4 cut(s) 21, 538, 788, 1513
BspMAI CTGCAG 2 cut(s) 233, 972
BspMI ACCTGC 4 cut(s) 222, 848, 1048, 1286
BspPI GGATC 3 cut(s) 14, 27, 1502
BspT107I GGYRCC 1 cut(s) 786
BsrDI GCAATG 1 cut(s) 676
BsrI ACTGG 2 cut(s) 286, 364
BssECI CCNNGG 5 cut(s) 186, 541, 701, 1398, 1734
BssMI GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
BssNAI GTATAC 1 cut(s) 1780
BssT1I CCWWGG 2 cut(s) 541, 1398
Bst1107I GTATAC 1 cut(s) 1780
Bst2UI CCWGG 1 cut(s) 24
Bst4CI ACNGT 6 cut(s) 131, 143, 804, 1251, 1577, 1657
Bst6I CTCTTC 5 cut(s) 325, 584, 615, 834, 1062
BstAPI GCANNNNNTGC 2 cut(s) 724, 967
BstBAI YACGTR 1 cut(s) 900
BstC8I GCNNGC 4 cut(s) 403, 725, 1261, 1531
BstDEI CTNAG 9 cut(s) 298, 682, 883, 1006, 1029, 1195, 1678, 1714, 1832
BstDSI CCRYGG 2 cut(s) 186, 701
BstH2I RGCGCY 1 cut(s) 364
BstHHI GCGC 1 cut(s) 363
BstKTI GATC 7 cut(s) 22, 125, 877, 1022, 1471, 1497, 1555
BstMBI GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
BstNI CCWGG 1 cut(s) 24
BstNSI RCATGY 4 cut(s) 81, 105, 405, 1743
BstSCI CCNGG 3 cut(s) 22, 1039, 1734
BstSFI CTRYAG 3 cut(s) 142, 229, 968
BstSLI GKGCMC 1 cut(s) 606
BstV1I GCAGC 8 cut(s) 47, 110, 811, 982, 1023, 1323, 1345, 1368
BstX2I RGATCY 1 cut(s) 19
BstYI RGATCY 1 cut(s) 19
BstZ17I GTATAC 1 cut(s) 1780
BsuI GTATCC 1 cut(s) 664
BsuRI GGCC 1 cut(s) 1676
BtgI CCRYGG 2 cut(s) 186, 701
BtrI CACGTC 2 cut(s) 62, 548
BtsIMutI CAGTG 6 cut(s) 139, 279, 371, 573, 800, 1446
BveI ACCTGC 4 cut(s) 222, 848, 1048, 1286
Cac8I GCNNGC 4 cut(s) 403, 725, 1261, 1531
CaiI CAGNNNCTG 1 cut(s) 1036
CfoI GCGC 1 cut(s) 363
Csp6I GTAC 3 cut(s) 787, 809, 956
CviQI GTAC 3 cut(s) 787, 809, 956
DdeI CTNAG 9 cut(s) 298, 682, 883, 1006, 1029, 1195, 1678, 1714, 1832
DpnI GATC 7 cut(s) 21, 124, 876, 1021, 1470, 1496, 1554
DpnII GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
DraIII CACNNNGTG 1 cut(s) 610
Eam1104I CTCTTC 5 cut(s) 325, 584, 615, 834, 1062
EarI CTCTTC 5 cut(s) 325, 584, 615, 834, 1062
Eco130I CCWWGG 2 cut(s) 541, 1398
Eco24I GRGCYC 3 cut(s) 491, 515, 539
Eco57I CTGAAG 2 cut(s) 513, 537
EcoRII CCWGG 1 cut(s) 22
EcoT14I CCWWGG 2 cut(s) 541, 1398
EcoT22I ATGCAT 1 cut(s) 79
EcoT38I GRGCYC 3 cut(s) 491, 515, 539
ErhI CCWWGG 2 cut(s) 541, 1398
FaqI GGGAC 1 cut(s) 21
FauI CCCGC 1 cut(s) 1522
FauNDI CATATG 1 cut(s) 1147
FbaI TGATCA 1 cut(s) 122
FblI GTMKAC 1 cut(s) 1779
Fnu4HI GCNGC 8 cut(s) 36, 99, 825, 971, 1037, 1334, 1337, 1357
FriOI GRGCYC 3 cut(s) 491, 515, 539
Fsp4HI GCNGC 8 cut(s) 36, 99, 825, 971, 1037, 1334, 1337, 1357
FspBI CTAG 3 cut(s) 765, 1264, 1363
GlaI GCGC 1 cut(s) 362
GluI GCNGC 8 cut(s) 36, 99, 825, 971, 1037, 1334, 1337, 1357
GsaI CCCAGC 2 cut(s) 1511, 1598
GsuI CTGGAG 3 cut(s) 60, 399, 816
HaeII RGCGCY 1 cut(s) 364
HaeIII GGCC 1 cut(s) 1676
HapII CCGG 3 cut(s) 17, 1040, 1736
HhaI GCGC 1 cut(s) 363
Hin6I GCGC 1 cut(s) 361
HinP1I GCGC 1 cut(s) 361
HincII GTYRAC 1 cut(s) 553
HindII GTYRAC 1 cut(s) 553
HinfI GANTC 4 cut(s) 761, 1046, 1199, 1682
HpaII CCGG 3 cut(s) 17, 1040, 1736
HphI GGTGA 8 cut(s) 260, 321, 395, 447, 872, 951, 1470, 1776
Hpy166II GTNNAC 6 cut(s) 190, 553, 604, 1099, 1580, 1780
Hpy188III TCNNGA 6 cut(s) 17, 765, 1005, 1050, 1139, 1363
Hpy8I GTNNAC 6 cut(s) 190, 553, 604, 1099, 1580, 1780
HpyAV CCTTC 5 cut(s) 464, 488, 512, 738, 920
HpyCH4III ACNGT 6 cut(s) 131, 143, 804, 1251, 1577, 1657
HpyCH4IV ACGT 3 cut(s) 61, 547, 899
HpyF3I CTNAG 9 cut(s) 298, 682, 883, 1006, 1029, 1195, 1678, 1714, 1832
HpySE526I ACGT 3 cut(s) 61, 547, 899
HspAI GCGC 1 cut(s) 361
Kpn2I TCCGGA 1 cut(s) 16
KpnI GGTACC 1 cut(s) 790
Ksp22I TGATCA 1 cut(s) 122
Kzo9I GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
LmnI GCTCC 2 cut(s) 542, 797
Lsp1109I GCAGC 8 cut(s) 47, 110, 811, 982, 1023, 1323, 1345, 1368
LweI GCATC 3 cut(s) 203, 859, 1304
MaeI CTAG 3 cut(s) 765, 1264, 1363
MaeII ACGT 3 cut(s) 61, 547, 899
MaeIII GTNAC 2 cut(s) 104, 1245
MalI GATC 7 cut(s) 21, 124, 876, 1021, 1470, 1496, 1554
MboI GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
MflI RGATCY 1 cut(s) 19
MhlI GDGCHC 7 cut(s) 85, 151, 491, 515, 539, 606, 802
MmeI TCCRAC 3 cut(s) 372, 1385, 1672
Mph1103I ATGCAT 1 cut(s) 79
MroI TCCGGA 1 cut(s) 16
MroXI GAANNNNTTC 1 cut(s) 334
MseI TTAA 6 cut(s) 421, 583, 1300, 1347, 1503, 1744
MslI CAYNNNNRTG 5 cut(s) 64, 1106, 1258, 1286, 1564
MspA1I CMGCKG 3 cut(s) 38, 824, 1336
MspI CCGG 3 cut(s) 17, 1040, 1736
MspR9I CCNGG 3 cut(s) 24, 1041, 1736
Mva1269I GAATGC 1 cut(s) 1132
MvaI CCWGG 1 cut(s) 24
NciI CCSGG 2 cut(s) 1041, 1736
NdeI CATATG 1 cut(s) 1147
NdeII GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
NlaIV GGNNCC 4 cut(s) 21, 538, 788, 1513
NsiI ATGCAT 1 cut(s) 79
NspI RCATGY 4 cut(s) 81, 105, 405, 1743
OliI CACNNNNGTG 1 cut(s) 1286
PaeI GCATGC 1 cut(s) 405
PaqCI CACCTGC 3 cut(s) 848, 1048, 1286
PctI GAATGC 1 cut(s) 1132
PdmI GAANNNNTTC 1 cut(s) 334
PfeI GAWTC 4 cut(s) 761, 1046, 1199, 1682
PflMI CCANNNNNTGG 1 cut(s) 1404
PfoI TCCNGGA 1 cut(s) 22
PkrI GCNGC 8 cut(s) 37, 100, 826, 972, 1038, 1335, 1338, 1358
Ppu21I YACGTR 1 cut(s) 900
PsiI TTATAA 1 cut(s) 1663
Psp6I CCWGG 1 cut(s) 22
PspFI CCCAGC 2 cut(s) 1507, 1594
PspGI CCWGG 1 cut(s) 22
PspN4I GGNNCC 4 cut(s) 21, 538, 788, 1513
PstI CTGCAG 2 cut(s) 233, 972
PstNI CAGNNNCTG 1 cut(s) 1036
PsuI RGATCY 1 cut(s) 19
PvuII CAGCTG 3 cut(s) 38, 824, 1336
RsaI GTAC 3 cut(s) 788, 810, 957
RsaNI GTAC 3 cut(s) 787, 809, 956
RseI CAYNNNNRTG 5 cut(s) 64, 1106, 1258, 1286, 1564
SaqAI TTAA 6 cut(s) 421, 583, 1300, 1347, 1503, 1744
SatI GCNGC 8 cut(s) 36, 99, 825, 971, 1037, 1334, 1337, 1357
Sau3AI GATC 7 cut(s) 19, 122, 874, 1019, 1468, 1494, 1552
SbfI CCTGCAGG 1 cut(s) 233
ScaI AGTACT 1 cut(s) 810
ScrFI CCNGG 3 cut(s) 24, 1041, 1736
SdaI CCTGCAGG 1 cut(s) 233
SduI GDGCHC 7 cut(s) 85, 151, 491, 515, 539, 606, 802
SfaNI GCATC 3 cut(s) 203, 859, 1304
SfcI CTRYAG 3 cut(s) 142, 229, 968
SmiMI CAYNNNNRTG 5 cut(s) 64, 1106, 1258, 1286, 1564
SmlI CTYRAG 4 cut(s) 162, 1090, 1325, 1686
SmoI CTYRAG 4 cut(s) 162, 1090, 1325, 1686
SphI GCATGC 1 cut(s) 405
Sse8387I CCTGCAGG 1 cut(s) 233
SsiI CCGC 3 cut(s) 33, 937, 1529
SspMI CTAG 3 cut(s) 765, 1264, 1363
StyD4I CCNGG 3 cut(s) 22, 1039, 1734
StyI CCWWGG 2 cut(s) 541, 1398
TaaI ACNGT 6 cut(s) 131, 143, 804, 1251, 1577, 1657
TaiI ACGT 3 cut(s) 64, 550, 902
TaqI TCGA 6 cut(s) 181, 731, 778, 877, 978, 1049
TatI WGTACW 2 cut(s) 808, 955
TfiI GAWTC 4 cut(s) 761, 1046, 1199, 1682
Tru1I TTAA 6 cut(s) 421, 583, 1300, 1347, 1503, 1744
Tru9I TTAA 6 cut(s) 421, 583, 1300, 1347, 1503, 1744
TscAI CASTG 6 cut(s) 146, 286, 371, 573, 807, 1446
TseI GCWGC 8 cut(s) 35, 98, 824, 970, 1036, 1333, 1336, 1356
TspDTI ATGAA 7 cut(s) 82, 212, 807, 981, 1164, 1255, 1282
TspGWI ACGGA 2 cut(s) 342, 1666
TspRI CASTG 6 cut(s) 146, 286, 371, 573, 807, 1446
Van91I CCANNNNNTGG 1 cut(s) 1404
VneI GTGCAC 1 cut(s) 602
XapI RAATTY 4 cut(s) 69, 171, 1188, 1749
XbaI TCTAGA 2 cut(s) 764, 1362
XceI RCATGY 4 cut(s) 81, 105, 405, 1743
XcmI CCANNNNNNNNNTGG 2 cut(s) 1522, 1635
XmiI GTMKAC 1 cut(s) 1779
XmnI GAANNNNTTC 1 cut(s) 334
XspI CTAG 3 cut(s) 765, 1264, 1363
ZrmI AGTACT 1 cut(s) 810
Zsp2I ATGCAT 1 cut(s) 79
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.