Rmu_sc0008835.1_g000002

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008835.1
OG0000280
Physical Location & Seq
Reverse (-)
10263 .. 12675
2413 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008835.1_g000002.1.cds

Sequence Viewer

Length: 2361 bp
atgagaatccaggcgacgccgtcgagattgtggccccgaggcacaaagcggccgaacatatggggaattcagaacgacgacggaacaaatggggaagaagatggtggaggatcgtctgtggagccactgccaaagcttgttccctgggggaggaagcggcggaggctaggatgcgagggtttttgggcaaatcaaaatgaaggaaacgcaagggctgtgaaggcgaagaagaagaagaagcagaagcagcagcagcagcagagaagggctcccttggaggtgcagcagcagagtagggataaacaagaaccactacctagctacctgcagagaaggactcccttgaaggtacggacaatcaattgccatcaatgtaagcaaaatgatatgggaagagcggtgcggtgcacaaagtgttcgaggaagaggtattgtatcccttgcataaggacttggtatcccaacacctcagaggaagccatagctgaggcttgtcctgcgtgccgcggcaactgcaactgcaatgtctgcctttgttggggtgtgcctgtcaggaatctgaacccgaaaatcgacaaggaggccaagctggatcactctaagtatttggttcatcagctgcttccgtatttgaagatgattagggatgagcaggtgagtgagatggtggtggaagccaataggcagggcttacgtgacctttcggagctcaaggtggacaaggctaaaagcggtggtgacggagtgcgtatgtactgcaacagctgcagcacttcaatttttgattttcataggacttgtcccgggtgtgagtatgatctgtgcctcggctgctgccgggagattcgagatggcaagtggaacaagagagctcaagcgtccacatttgagtggaaatggagagcaagtgaaggcggaaacattttctgcccaccaacacacatgagaggttgtggtaagcataatttagaattgagatgcatttttcctcagaatcatgtcatggagttggtagagaaagcagaagaaatagattcaagttacaattttttgcctgattgtagtgaaacatgtgcatataagtgttcatgtgttaaacctgtggatgatgccgttagctcaaatagtagcagcagctgtaagttaaggaaagcagcttctagagttgcttctgatagtgactacttgttctgtccaagggttggacaaattcaagataaggattttgggcattttcagtggcattggaagaggggagagcctgtgatcgttagcaatgcacttgaaaatggatcaggtttaagctgggaaccatctgtcttgtggcgggcatttagacagatagagaaagtcaagaatgatagtgagttgacattccacgccattgattgttgggattggtgttctatagaaatcaacatcctccatttctttagtggatattccaacggacagtctcataagacaggatggcctcagaatctcaagctcaatgacttcccatcatctgctgaattttacaaacgtcttccccggcattgtaaggaatttttatgttgtctgcctctcaaggagtatactcaccccaacaagggaactttgaaccttgctacctacttgccacctacctcagtaaagccggacatgggtccaaaaacatatattgcctatggttttgcacaggagcttggacagggagattccgtaaccaagcttcactgcaatatgtctgatgcggttaatattctgacacatacagctgaagtggcccttacaactgaacaacttgcaactatagagaagttgaagaaaaagcacagggagcaaaacgaaagagagatatttggggattgtcacacaagtgcgggaaatggaagtgggcctcagcaagagtcagctatagagaagttgaagagaaagtatagggagcaaaacgaaagagagatatttgggaattgtcacacaagtgctggaagtggaagtgggcctcaggatgagtcagctgaagtatgtgaggatggaggtgccttatgggacattttccggatccaggatgttccgcagctggagaaatacatccacaagcacgtcaatgaatttatgcatgtgctctgtaatcctttgcagcatgttactcatgctatacatgatcagactgtttatctcactgtagagcacaagaggaagctcaaggaggaatttggtatcgagccgtggacatttgttcaaagacttggagatgctgttttcattcctgcaggttgtcctcatcaggtgaggaacttgaagtcttgtttcaaagttgcactggactttgtttcccctgagaatgtggcgccagtgaggacaagctggaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

786

Amino Acids

89.57

Weight (kDa)

8.69

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 643
Acc36I ACCTGC 3 cut(s) 333, 643, 2249
AccB1I GGYRCC 2 cut(s) 2024, 2335
AccB7I CCANNNNNTGG 1 cut(s) 1202
AccBSI CCGCTC 1 cut(s) 398
AccI GTMKAC 1 cut(s) 1577
AccII CGCG 1 cut(s) 507
AccIII TCCGGA 1 cut(s) 2043
AclWI GGATC 5 cut(s) 118, 600, 1300, 2041, 2054
AcoI YGGCCR 1 cut(s) 50
AcsI RAATTY 6 cut(s) 66, 1209, 1514, 1547, 2096, 2198
AcuI CTGAAG 2 cut(s) 1782, 2025
AcyI GRCGYC 2 cut(s) 17, 2336
AdeI CACNNNGTG 1 cut(s) 414
AfaI GTAC 2 cut(s) 351, 755
AfiI CCNNNNNNNGG 7 cut(s) 150, 538, 1202, 1591, 1592, 1646, 2050
AflIII ACRYGT 1 cut(s) 1070
AjiI CACGTC 1 cut(s) 2089
AjnI CCWGG 3 cut(s) 9, 143, 2049
AleI CACNNNNGTG 2 cut(s) 1860, 1965
Alw21I GWGCWC 5 cut(s) 410, 711, 874, 2112, 2178
Alw26I GTCTC 1 cut(s) 1461
Alw44I GTGCAC 1 cut(s) 406
AlwI GGATC 5 cut(s) 118, 600, 1300, 2041, 2054
AlwNI CAGNNNCTG 1 cut(s) 1137
Ama87I CYCGRG 2 cut(s) 36, 803
Aor13HI TCCGGA 1 cut(s) 2043
AoxI GGCC 7 cut(s) 32, 50, 582, 1472, 1767, 1880, 1985
ApaLI GTGCAC 1 cut(s) 406
ApoI RAATTY 6 cut(s) 66, 1209, 1514, 1547, 2096, 2198
AspLEI GCGC 1 cut(s) 2338
AspS9I GGNCC 5 cut(s) 33, 1649, 1768, 1880, 1985
AsuC2I CCSGG 4 cut(s) 804, 805, 839, 1534
AsuHPI GGTGA 4 cut(s) 667, 749, 1574, 2287
AvaI CYCGRG 2 cut(s) 36, 803
AvaII GGWCC 1 cut(s) 1649
AxyI CCTNAGG 1 cut(s) 1989
BaeGI GKGCMC 1 cut(s) 410
BamHI GGATCC 1 cut(s) 2046
BanI GGYRCC 2 cut(s) 2024, 2335
BanII GRGCYC 3 cut(s) 271, 711, 874
BarI GAAGNNNNNNTAC 2 cut(s) 1698, 1730
BbsI GAAGAC 1 cut(s) 1520
Bbv12I GWGCWC 5 cut(s) 410, 711, 874, 2112, 2178
BbvCI CCTCAGC 2 cut(s) 486, 1884
BccI CCATC 8 cut(s) 95, 375, 658, 845, 1321, 1464, 1510, 2012
BceAI ACGGC 3 cut(s) 4, 1097, 2197
BciT130I CCWGG 3 cut(s) 11, 145, 2051
BciVI GTATCC 2 cut(s) 446, 468
BclI TGATCA 1 cut(s) 2149
BcnI CCSGG 4 cut(s) 804, 805, 839, 1534
BcoDI GTCTC 1 cut(s) 1461
BfaI CTAG 3 cut(s) 167, 318, 1161
BfmI CTRYAG 7 cut(s) 326, 766, 1407, 1794, 1899, 2169, 2256
BfoI RGCGCY 1 cut(s) 2339
BfuAI ACCTGC 3 cut(s) 333, 643, 2249
BfuI GTATCC 2 cut(s) 446, 468
Bme1390I CCNGG 7 cut(s) 11, 145, 804, 805, 839, 1534, 2051
Bme18I GGWCC 1 cut(s) 1649
BmeT110I CYCGRG 2 cut(s) 36, 803
BmgBI CACGTC 1 cut(s) 2089
BmgT120I GGNCC 5 cut(s) 33, 1649, 1768, 1880, 1985
BmiI GGNNCC 8 cut(s) 35, 123, 270, 1311, 1650, 2026, 2048, 2337
BmrFI CCNGG 7 cut(s) 11, 145, 804, 805, 839, 1534, 2051
BmsI GCATC 5 cut(s) 161, 968, 1099, 1723, 2230
BoxI GACNNNNGTC 1 cut(s) 1647
BpiI GAAGAC 1 cut(s) 1520
BplI GAGNNNNNCTC 4 cut(s) 253, 285, 322, 354
BpmI CTGGAG 1 cut(s) 2087
Bpu10I CCTNAGC 2 cut(s) 486, 1884
BpuEI CTTGAG 5 cut(s) 695, 858, 1469, 1553, 2174
BpuMI CCSGG 4 cut(s) 804, 805, 839, 1534
BsaAI YACGTR 1 cut(s) 695
BsaHI GRCGYC 2 cut(s) 17, 2336
BsaWI WCCGGW 1 cut(s) 2043
BsaXI ACNNNNNCTCC 8 cut(s) 892, 922, 1248, 1278, 1689, 1719, 2229, 2259
Bsc4I CCNNNNNNNGG 7 cut(s) 150, 538, 1202, 1591, 1592, 1646, 2050
Bse1I ACTGG 2 cut(s) 2313, 2339
Bse21I CCTNAGG 1 cut(s) 1989
Bse3DI GCAATG 2 cut(s) 529, 1282
BseAI TCCGGA 1 cut(s) 2043
BseBI CCWGG 3 cut(s) 11, 145, 2051
BseGI GGATG 9 cut(s) 176, 652, 1111, 1419, 1475, 1999, 2023, 2059, 2076
BseLI CCNNNNNNNGG 7 cut(s) 150, 538, 1202, 1591, 1592, 1646, 2050
BseMI GCAATG 2 cut(s) 529, 1282
BseMII CTCAG 8 cut(s) 477, 483, 1004, 1490, 1644, 1898, 2003, 2316
BseNI ACTGG 2 cut(s) 2313, 2339
BseSI GKGCMC 1 cut(s) 410
BseX3I CGGCCG 1 cut(s) 50
BseYI CCCAGC 1 cut(s) 1305
BsgI GTGCAG 1 cut(s) 302
Bsh1236I CGCG 1 cut(s) 507
Bsh1285I CGRYCG 1 cut(s) 53
BshFI GGCC 7 cut(s) 34, 52, 584, 1474, 1769, 1882, 1987
BshNI GGYRCC 2 cut(s) 2024, 2335
BsiEI CGRYCG 1 cut(s) 53
BsiHKAI GWGCWC 5 cut(s) 410, 711, 874, 2112, 2178
BsiHKCI CYCGRG 2 cut(s) 36, 803
BsiSI CCGG 5 cut(s) 804, 838, 1534, 1640, 2044
BslFI GGGAC 2 cut(s) 786, 2048
BslI CCNNNNNNNGG 7 cut(s) 150, 538, 1202, 1591, 1592, 1646, 2050
BsmAI GTCTC 1 cut(s) 1461
BsmFI GGGAC 2 cut(s) 786, 2048
BsnI GGCC 7 cut(s) 34, 52, 584, 1474, 1769, 1882, 1987
BsoBI CYCGRG 2 cut(s) 36, 803
Bsp1286I GDGCHC 6 cut(s) 271, 410, 711, 874, 2112, 2178
Bsp13I TCCGGA 1 cut(s) 2043
Bsp143I GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
BspANI GGCC 7 cut(s) 34, 52, 584, 1474, 1769, 1882, 1987
BspCNI CTCAG 8 cut(s) 478, 482, 1003, 1489, 1643, 1897, 2002, 2317
BspEI TCCGGA 1 cut(s) 2043
BspFNI CGCG 1 cut(s) 507
BspLI GGNNCC 8 cut(s) 35, 123, 270, 1311, 1650, 2026, 2048, 2337
BspMAI CTGCAG 3 cut(s) 330, 770, 2260
BspMI ACCTGC 3 cut(s) 333, 643, 2249
BspPI GGATC 5 cut(s) 118, 600, 1300, 2041, 2054
BspQI GCTCTTC 1 cut(s) 388
BspT107I GGYRCC 2 cut(s) 2024, 2335
BsrBI CCGCTC 1 cut(s) 398
BsrDI GCAATG 2 cut(s) 529, 1282
BsrI ACTGG 2 cut(s) 2313, 2339
BssMI GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
BssNAI GTATAC 1 cut(s) 1578
BssNI GRCGYC 2 cut(s) 17, 2336
BssT1I CCWWGG 2 cut(s) 273, 1196
Bst1107I GTATAC 1 cut(s) 1578
Bst2UI CCWGG 3 cut(s) 11, 145, 2051
Bst4CI ACNGT 3 cut(s) 1455, 2158, 2170
Bst6I CTCTTC 4 cut(s) 388, 419, 1244, 1907
BstACI GRCGYC 2 cut(s) 17, 2336
BstAPI GCANNNNNTGC 2 cut(s) 528, 765
BstBAI YACGTR 1 cut(s) 695
BstC8I GCNNGC 2 cut(s) 502, 1329
BstDEI CTNAG 9 cut(s) 469, 486, 600, 990, 1476, 1630, 1884, 1989, 2325
BstDSI CCRYGG 2 cut(s) 505, 2213
BstENI CCTNNNNNAGG 1 cut(s) 148
BstF5I GGATG 9 cut(s) 176, 652, 1111, 1419, 1475, 1999, 2023, 2059, 2076
BstFNI CGCG 1 cut(s) 507
BstH2I RGCGCY 1 cut(s) 2339
BstHHI GCGC 1 cut(s) 2338
BstKTI GATC 7 cut(s) 113, 595, 820, 1269, 1295, 2049, 2152
BstMAI GTCTC 1 cut(s) 1461
BstMBI GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
BstMCI CGRYCG 1 cut(s) 53
BstNI CCWGG 3 cut(s) 11, 145, 2051
BstNSI RCATGY 3 cut(s) 1074, 2108, 2132
BstPAI GACNNNNGTC 1 cut(s) 1647
BstSCI CCNGG 7 cut(s) 9, 143, 802, 803, 837, 1532, 2049
BstSFI CTRYAG 7 cut(s) 326, 766, 1407, 1794, 1899, 2169, 2256
BstSLI GKGCMC 1 cut(s) 410
BstUI CGCG 1 cut(s) 507
BstV2I GAAGAC 1 cut(s) 1520
BstX2I RGATCY 1 cut(s) 2046
BstYI RGATCY 1 cut(s) 2046
BstZ17I GTATAC 1 cut(s) 1578
BstZI CGGCCG 1 cut(s) 50
Bsu36I CCTNAGG 1 cut(s) 1989
BsuI GTATCC 2 cut(s) 446, 468
BsuRI GGCC 7 cut(s) 34, 52, 584, 1474, 1769, 1882, 1987
BtgI CCRYGG 2 cut(s) 505, 2213
BtrI CACGTC 1 cut(s) 2089
BtsCI GGATG 9 cut(s) 176, 652, 1111, 1419, 1475, 1999, 2023, 2059, 2076
BtsI GCAGTG 2 cut(s) 125, 1717
BtsIMutI CAGTG 6 cut(s) 125, 1244, 1717, 2166, 2306, 2346
BveI ACCTGC 3 cut(s) 333, 643, 2249
Cac8I GCNNGC 2 cut(s) 502, 1329
CaiI CAGNNNCTG 1 cut(s) 1137
CfoI GCGC 1 cut(s) 2338
Cfr13I GGNCC 5 cut(s) 33, 1649, 1768, 1880, 1985
Cfr42I CCGCGG 1 cut(s) 508
Cfr9I CCCGGG 1 cut(s) 803
CseI GACGC 2 cut(s) 25, 867
Csp6I GTAC 2 cut(s) 350, 754
CviQI GTAC 2 cut(s) 350, 754
DdeI CTNAG 9 cut(s) 469, 486, 600, 990, 1476, 1630, 1884, 1989, 2325
DinI GGCGCC 1 cut(s) 2337
DpnI GATC 7 cut(s) 112, 594, 819, 1268, 1294, 2048, 2151
DpnII GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
DraIII CACNNNGTG 1 cut(s) 414
EaeI YGGCCR 1 cut(s) 50
EagI CGGCCG 1 cut(s) 50
Eam1104I CTCTTC 4 cut(s) 388, 419, 1244, 1907
EarI CTCTTC 4 cut(s) 388, 419, 1244, 1907
EciI GGCGGA 2 cut(s) 175, 930
Ecl136II GAGCTC 2 cut(s) 709, 872
EclXI CGGCCG 1 cut(s) 50
Eco130I CCWWGG 2 cut(s) 273, 1196
Eco24I GRGCYC 3 cut(s) 271, 711, 874
Eco47I GGWCC 1 cut(s) 1649
Eco52I CGGCCG 1 cut(s) 50
Eco53kI GAGCTC 2 cut(s) 709, 872
Eco57I CTGAAG 2 cut(s) 1782, 2025
Eco81I CCTNAGG 1 cut(s) 1989
Eco88I CYCGRG 2 cut(s) 36, 803
EcoICRI GAGCTC 2 cut(s) 709, 872
EcoNI CCTNNNNNAGG 1 cut(s) 148
EcoRI GAATTC 1 cut(s) 66
EcoRII CCWGG 3 cut(s) 9, 143, 2049
EcoT14I CCWWGG 2 cut(s) 273, 1196
EcoT22I ATGCAT 2 cut(s) 983, 2106
EcoT38I GRGCYC 3 cut(s) 271, 711, 874
EgeI GGCGCC 1 cut(s) 2337
EheI GGCGCC 1 cut(s) 2337
ErhI CCWWGG 2 cut(s) 273, 1196
FalI AAGNNNNNCTT 2 cut(s) 1755, 1787
FaqI GGGAC 2 cut(s) 786, 2048
FauI CCCGC 2 cut(s) 1320, 1858
FauNDI CATATG 1 cut(s) 59
FbaI TGATCA 1 cut(s) 2149
FblI GTMKAC 1 cut(s) 1577
FokI GGATG 9 cut(s) 183, 659, 1118, 1406, 1482, 2006, 2030, 2063, 2066
FriOI GRGCYC 3 cut(s) 271, 711, 874
FspBI CTAG 3 cut(s) 167, 318, 1161
GlaI GCGC 1 cut(s) 2337
GsaI CCCAGC 1 cut(s) 1309
GsuI CTGGAG 1 cut(s) 2087
HaeII RGCGCY 1 cut(s) 2339
HaeIII GGCC 7 cut(s) 34, 52, 584, 1474, 1769, 1882, 1987
HapII CCGG 5 cut(s) 804, 838, 1534, 1640, 2044
HgaI GACGC 2 cut(s) 25, 867
HhaI GCGC 1 cut(s) 2338
Hin1I GRCGYC 2 cut(s) 17, 2336
Hin6I GCGC 1 cut(s) 2336
HinP1I GCGC 1 cut(s) 2336
HincII GTYRAC 1 cut(s) 1371
HindII GTYRAC 1 cut(s) 1371
HindIII AAGCTT 2 cut(s) 134, 1712
HpaII CCGG 5 cut(s) 804, 838, 1534, 1640, 2044
HphI GGTGA 4 cut(s) 667, 749, 1574, 2287
Hpy166II GTNNAC 6 cut(s) 408, 718, 882, 1371, 1578, 2217
Hpy188III TCNNGA 8 cut(s) 24, 553, 848, 1161, 1214, 1354, 1991, 2044
Hpy8I GTNNAC 6 cut(s) 408, 718, 882, 1371, 1578, 2217
Hpy99I CGWCG 4 cut(s) 19, 25, 80, 83
HpyAV CCTTC 6 cut(s) 194, 214, 258, 327, 340, 905
HpyCH4III ACNGT 3 cut(s) 1455, 2158, 2170
HpyCH4IV ACGT 3 cut(s) 694, 1525, 2088
HpyF3I CTNAG 9 cut(s) 469, 486, 600, 990, 1476, 1630, 1884, 1989, 2325
HpySE526I ACGT 3 cut(s) 694, 1525, 2088
Hsp92I GRCGYC 2 cut(s) 17, 2336
HspAI GCGC 1 cut(s) 2336
KasI GGCGCC 1 cut(s) 2335
Kpn2I TCCGGA 1 cut(s) 2043
Ksp22I TGATCA 1 cut(s) 2149
KspI CCGCGG 1 cut(s) 508
Kzo9I GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
LguI GCTCTTC 1 cut(s) 388
LmnI GCTCC 6 cut(s) 121, 274, 706, 1684, 1822, 1927
LweI GCATC 5 cut(s) 161, 968, 1099, 1723, 2230
MaeI CTAG 3 cut(s) 167, 318, 1161
MaeII ACGT 3 cut(s) 694, 1525, 2088
MaeIII GTNAC 8 cut(s) 695, 737, 1040, 1178, 1705, 1853, 1958, 2131
MalI GATC 7 cut(s) 112, 594, 819, 1268, 1294, 2048, 2151
MbiI CCGCTC 1 cut(s) 398
MboI GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
MfeI CAATTG 1 cut(s) 361
MflI RGATCY 1 cut(s) 2046
MhlI GDGCHC 6 cut(s) 271, 410, 711, 874, 2112, 2178
Mly113I GGCGCC 1 cut(s) 2336
MlyI GAGTC 3 cut(s) 331, 1901, 2006
MmeI TCCRAC 2 cut(s) 1183, 1470
Mph1103I ATGCAT 2 cut(s) 983, 2106
MroI TCCGGA 1 cut(s) 2043
MseI TTAA 4 cut(s) 1095, 1145, 1301, 1740
MslI CAYNNNNRTG 5 cut(s) 889, 1081, 1860, 1965, 2091
MspA1I CMGCKG 7 cut(s) 507, 619, 765, 1137, 1760, 2003, 2065
MspI CCGG 5 cut(s) 804, 838, 1534, 1640, 2044
MspR9I CCNGG 7 cut(s) 11, 145, 804, 805, 839, 1534, 2051
MunI CAATTG 1 cut(s) 361
MvaI CCWGG 3 cut(s) 11, 145, 2051
MvnI CGCG 1 cut(s) 507
NarI GGCGCC 1 cut(s) 2336
NciI CCSGG 4 cut(s) 804, 805, 839, 1534
NdeI CATATG 1 cut(s) 59
NdeII GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
NlaIV GGNNCC 8 cut(s) 35, 123, 270, 1311, 1650, 2026, 2048, 2337
NmeAIII GCCGAG 1 cut(s) 807
NmuCI GTSAC 5 cut(s) 695, 737, 1178, 1853, 1958
NsiI ATGCAT 2 cut(s) 983, 2106
NspI RCATGY 3 cut(s) 1074, 2108, 2132
OliI CACNNNNGTG 2 cut(s) 1860, 1965
PaqCI CACCTGC 1 cut(s) 643
PasI CCCWGGG 1 cut(s) 144
PciI ACATGT 1 cut(s) 1070
PciSI GCTCTTC 1 cut(s) 388
PfeI GAWTC 7 cut(s) 6, 556, 844, 994, 1034, 1480, 1700
PflFI GACNNNGTC 1 cut(s) 19
PflMI CCANNNNNTGG 1 cut(s) 1202
PfoI TCCNGGA 1 cut(s) 2049
PleI GAGTC 3 cut(s) 331, 1900, 2005
PluTI GGCGCC 1 cut(s) 2339
PpsI GAGTC 3 cut(s) 331, 1900, 2005
Ppu21I YACGTR 1 cut(s) 695
PscI ACATGT 1 cut(s) 1070
PshAI GACNNNNGTC 1 cut(s) 1647
Psp124BI GAGCTC 2 cut(s) 711, 874
Psp6I CCWGG 3 cut(s) 9, 143, 2049
PspFI CCCAGC 1 cut(s) 1305
PspGI CCWGG 3 cut(s) 9, 143, 2049
PspN4I GGNNCC 8 cut(s) 35, 123, 270, 1311, 1650, 2026, 2048, 2337
PspPI GGNCC 5 cut(s) 33, 1649, 1768, 1880, 1985
PstI CTGCAG 3 cut(s) 330, 770, 2260
PstNI CAGNNNCTG 1 cut(s) 1137
PsuI RGATCY 1 cut(s) 2046
PsyI GACNNNGTC 1 cut(s) 19
PvuII CAGCTG 6 cut(s) 619, 765, 1137, 1760, 2003, 2065
RsaI GTAC 2 cut(s) 351, 755
RsaNI GTAC 2 cut(s) 350, 754
RseI CAYNNNNRTG 5 cut(s) 889, 1081, 1860, 1965, 2091
SacI GAGCTC 2 cut(s) 711, 874
SacII CCGCGG 1 cut(s) 508
SapI GCTCTTC 1 cut(s) 388
SaqAI TTAA 4 cut(s) 1095, 1145, 1301, 1740
Sau3AI GATC 7 cut(s) 110, 592, 817, 1266, 1292, 2046, 2149
Sau96I GGNCC 5 cut(s) 33, 1649, 1768, 1880, 1985
SbfI CCTGCAGG 1 cut(s) 2260
SchI GAGTC 3 cut(s) 331, 1901, 2006
ScrFI CCNGG 7 cut(s) 11, 145, 804, 805, 839, 1534, 2051
SdaI CCTGCAGG 1 cut(s) 2260
SduI GDGCHC 6 cut(s) 271, 410, 711, 874, 2112, 2178
SfaNI GCATC 5 cut(s) 161, 968, 1099, 1723, 2230
SfcI CTRYAG 7 cut(s) 326, 766, 1407, 1794, 1899, 2169, 2256
SfoI GGCGCC 1 cut(s) 2337
Sfr303I CCGCGG 1 cut(s) 508
SgrBI CCGCGG 1 cut(s) 508
SinI GGWCC 1 cut(s) 1649
SmaI CCCGGG 1 cut(s) 805
SmiMI CAYNNNNRTG 5 cut(s) 889, 1081, 1860, 1965, 2091
SmlI CTYRAG 5 cut(s) 710, 873, 1484, 1568, 2189
SmoI CTYRAG 5 cut(s) 710, 873, 1484, 1568, 2189
Sse8387I CCTGCAGG 1 cut(s) 2260
SspDI GGCGCC 1 cut(s) 2335
SspI AATATT 1 cut(s) 1744
SspMI CTAG 3 cut(s) 167, 318, 1161
SstI GAGCTC 2 cut(s) 711, 874
StyD4I CCNGG 7 cut(s) 9, 143, 802, 803, 837, 1532, 2049
StyI CCWWGG 2 cut(s) 273, 1196
TaaI ACNGT 3 cut(s) 1455, 2158, 2170
TaiI ACGT 3 cut(s) 697, 1528, 2091
TaqI TCGA 5 cut(s) 23, 419, 573, 847, 2208
TatI WGTACW 1 cut(s) 753
TauI GCSGC 4 cut(s) 52, 160, 507, 510
TfiI GAWTC 7 cut(s) 6, 556, 844, 994, 1034, 1480, 1700
Tru1I TTAA 4 cut(s) 1095, 1145, 1301, 1740
Tru9I TTAA 4 cut(s) 1095, 1145, 1301, 1740
TscAI CASTG 6 cut(s) 132, 1244, 1724, 2173, 2313, 2346
TseFI GTSAC 5 cut(s) 695, 737, 1178, 1853, 1958
Tsp45I GTSAC 5 cut(s) 695, 737, 1178, 1853, 1958
TspDTI ATGAA 6 cut(s) 213, 602, 779, 1077, 2109, 2239
TspGWI ACGGA 6 cut(s) 96, 367, 615, 756, 1464, 1693
TspMI CCCGGG 1 cut(s) 803
TspRI CASTG 6 cut(s) 132, 1244, 1724, 2173, 2313, 2346
Tth111I GACNNNGTC 1 cut(s) 19
Van91I CCANNNNNTGG 1 cut(s) 1202
VneI GTGCAC 1 cut(s) 406
VpaK11BI GGWCC 1 cut(s) 1649
XagI CCTNNNNNAGG 1 cut(s) 148
XapI RAATTY 6 cut(s) 66, 1209, 1514, 1547, 2096, 2198
XbaI TCTAGA 1 cut(s) 1160
XceI RCATGY 3 cut(s) 1074, 2108, 2132
XcmI CCANNNNNNNNNTGG 2 cut(s) 1320, 1433
XmaI CCCGGG 1 cut(s) 803
XmiI GTMKAC 1 cut(s) 1577
XspI CTAG 3 cut(s) 167, 318, 1161
Zsp2I ATGCAT 2 cut(s) 983, 2106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.