Rh1AG199300

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000280
Physical Location & Seq
Reverse (-)
37959009 .. 37963499
4491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG199300.1

Sequence Viewer

Length: 1206 bp
ATGGGGCCTCAAAGGCTAAAACTGAGAGATTGTGCTCCAGCGAGTTTGATTGAGGAGCACCTTCCTCATCATGGTGCTGAGTTTATCTATGGCTTGCCATTTAAGGAATATACTCATCCTCACAGTGGGTTTCTTAATCTTGCTGCTAAATTCCCTGAGGAGTGTGGGAAGCCTGCTTATGGCGTTGCGCAGGAGCTTGGACGTGAAGATTCTGTGACTAAGCTTCATTGCAATATATCTGATGTGGTGAATGTTTTGACACATACTGCTGAAGTGACCCCTAATTCTCAACAACTTCGTACAGTAGAAAGGCTAAAAAAAGCGCAGATTGAGCAAGATAGAAGAGAAACTTTAGGAAACTGTCACTCTGCGGATGGCAATGTTGATGGTGGAAATCTTTCAAACTATTCCAGATCTGAAAATAATGTAGACGGTGGTGCTTTATGGGACATTTTTCGGAGACAGGATGTTCCAAAACTACAGGAATATCTCAGGAAGCACTTCAACGAGTTCAGGCACACATACTGCTGTCCGTCCCAACAGATTATTCATCCCATTCACGATCAGAACTTTTACCTGACTCGGGAGCACAAAAGGAAGCTGAAAGAGGAATGTGGAATCGAACCATGGACATGTATCCAGAAACTTGGGGATGCTATCTTTGTTCCTGCAGGCTGTCCATATCAAGTCAGAAACTTGAAGTCATTCATTAAAGTTGCAGTTCAATTTGTCTCACCTGAAAGTGTTGGCGATTGCTTTCGTTTGACTGAAGAATGCCGCACACTTCCAAAAGATCACGGGGCTAAAGAGGATAAATTGGAGGTGAAAAAAATGATTGTGCATGCTATGCGGGAAGCTGTGGATATTTTGGATCAGAGTGTGAGGGTTAGACAAGCAAAGAGAGAGGAAGTTGGACAAAGACAGCAAGTACAGAGCAGAAAGGAGGGGGAAGTTCAAGCTGATGAGGAGCAGCCAACAATGTCATCACATCCAGCACAGTTCCCTCTTGATCTTGTTACAGCAATGCAGCGGCTAGATGACCTCGTGGAGCGCTTTTCGGATTTTGAACACTTGGAAGAGAGAGATAGAATAATGAATCCGGAATACCAGTTCTTATGTTCAGAGTTCATGAATTTATCTTCACATCTTGGTTATGCAACTCAGGTGAAAGAGTCTGCCATTCCACCATCCTATCAGCAACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

401

Amino Acids

46.06

Weight (kDa)

6.03

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 141 - 243 6.7e-12 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 189
AccI GTMKAC 1 cut(s) 429
AccIII TCCGGA 1 cut(s) 1099
AciI CCGC 4 cut(s) 371, 778, 850, 1030
AclWI GGATC 1 cut(s) 879
AcsI RAATTY 2 cut(s) 149, 1132
AcuI CTGAAG 2 cut(s) 291, 789
AfaI GTAC 2 cut(s) 301, 930
AfeI AGCGCT 1 cut(s) 1052
AfiI CCNNNNNNNGG 4 cut(s) 71, 125, 179, 583
AflIII ACRYGT 1 cut(s) 632
AgsI TTSAA 6 cut(s) 402, 505, 700, 725, 956, 1067
AjiI CACGTC 1 cut(s) 203
AjuI GAANNNNNNNTTGG 2 cut(s) 531, 563
AloI GAACNNNNNNTCC 2 cut(s) 1094, 1126
AluBI AGCT 5 cut(s) 196, 223, 601, 857, 959
AluI AGCT 5 cut(s) 196, 223, 601, 857, 959
Alw21I GWGCWC 3 cut(s) 37, 60, 591
Alw26I GTCTC 2 cut(s) 454, 736
AlwI GGATC 1 cut(s) 879
Ama87I CYCGRG 1 cut(s) 582
Aor13HI TCCGGA 1 cut(s) 1099
Aor51HI AGCGCT 1 cut(s) 1052
AoxI GGCC 1 cut(s) 5
ApeKI GCWGC 3 cut(s) 143, 970, 1027
ApoI RAATTY 2 cut(s) 149, 1132
Asp700I GAANNNNTTC 3 cut(s) 397, 500, 704
AspLEI GCGC 3 cut(s) 190, 325, 1053
AspS9I GGNCC 1 cut(s) 5
AsuHPI GGTGA 4 cut(s) 259, 726, 835, 1177
AvaI CYCGRG 1 cut(s) 582
AxyI CCTNAGG 1 cut(s) 156
BauI CACGAG 1 cut(s) 1043
Bbv12I GWGCWC 3 cut(s) 37, 60, 591
BbvI GCAGC 3 cut(s) 130, 982, 1039
BccI CCATC 3 cut(s) 368, 380, 1195
BciVI GTATCC 1 cut(s) 647
BcoDI GTCTC 2 cut(s) 454, 736
BfaI CTAG 1 cut(s) 1034
BfmI CTRYAG 2 cut(s) 479, 669
BfoI RGCGCY 1 cut(s) 1054
BfuI GTATCC 1 cut(s) 647
BglI GCCNNNNNGGC 1 cut(s) 13
BglII AGATCT 1 cut(s) 413
BisI GCNGC 5 cut(s) 144, 778, 971, 1028, 1031
BlsI GCNGC 5 cut(s) 145, 779, 972, 1029, 1032
BmeT110I CYCGRG 1 cut(s) 582
BmgBI CACGTC 1 cut(s) 203
BmgT120I GGNCC 1 cut(s) 5
BmiI GGNNCC 1 cut(s) 6
BmsI GCATC 1 cut(s) 643
BpmI CTGGAG 1 cut(s) 21
BsaJI CCNNGG 1 cut(s) 626
BsaWI WCCGGW 1 cut(s) 1099
Bsc4I CCNNNNNNNGG 4 cut(s) 71, 125, 179, 583
Bse1I ACTGG 1 cut(s) 1108
Bse21I CCTNAGG 1 cut(s) 156
Bse3DI GCAATG 3 cut(s) 226, 385, 1029
BseAI TCCGGA 1 cut(s) 1099
BseDI CCNNGG 1 cut(s) 626
BseGI GGATG 7 cut(s) 115, 379, 472, 550, 658, 988, 1187
BseLI CCNNNNNNNGG 4 cut(s) 71, 125, 179, 583
BseMI GCAATG 3 cut(s) 226, 385, 1029
BseMII CTCAG 5 cut(s) 14, 69, 147, 505, 1175
BseNI ACTGG 1 cut(s) 1108
BseRI GAGGAG 3 cut(s) 68, 173, 980
BseXI GCAGC 3 cut(s) 130, 982, 1039
BshFI GGCC 1 cut(s) 7
BsiHKAI GWGCWC 3 cut(s) 37, 60, 591
BsiHKCI CYCGRG 1 cut(s) 582
BsiSI CCGG 1 cut(s) 1100
BslFI GGGAC 2 cut(s) 461, 520
BslI CCNNNNNNNGG 4 cut(s) 71, 125, 179, 583
BsmAI GTCTC 2 cut(s) 454, 736
BsmFI GGGAC 2 cut(s) 461, 520
BsmI GAATGC 1 cut(s) 779
BsnI GGCC 1 cut(s) 7
BsoBI CYCGRG 1 cut(s) 582
Bsp1286I GDGCHC 3 cut(s) 37, 60, 591
Bsp13I TCCGGA 1 cut(s) 1099
Bsp143I GATC 5 cut(s) 413, 562, 793, 871, 1009
Bsp19I CCATGG 1 cut(s) 626
BspACI CCGC 4 cut(s) 371, 778, 850, 1030
BspANI GGCC 1 cut(s) 7
BspCNI CTCAG 5 cut(s) 15, 70, 148, 504, 1174
BspEI TCCGGA 1 cut(s) 1099
BspHI TCATGA 1 cut(s) 1128
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 1 cut(s) 673
BspPI GGATC 1 cut(s) 879
BsrDI GCAATG 3 cut(s) 226, 385, 1029
BsrI ACTGG 1 cut(s) 1108
BssECI CCNNGG 1 cut(s) 626
BssMI GATC 5 cut(s) 413, 562, 793, 871, 1009
BssSI CACGAG 1 cut(s) 1043
BssT1I CCWWGG 1 cut(s) 626
Bst2BI CACGAG 1 cut(s) 1043
Bst4CI ACNGT 5 cut(s) 125, 304, 362, 434, 999
Bst6I CTCTTC 2 cut(s) 337, 1071
BstAPI GCANNNNNTGC 1 cut(s) 847
BstC8I GCNNGC 4 cut(s) 95, 174, 673, 843
BstDEI CTNAG 6 cut(s) 23, 78, 156, 219, 491, 1161
BstDSI CCRYGG 1 cut(s) 626
BstF5I GGATG 7 cut(s) 115, 379, 472, 550, 658, 988, 1187
BstH2I RGCGCY 1 cut(s) 1054
BstHHI GCGC 3 cut(s) 190, 325, 1053
BstKTI GATC 5 cut(s) 416, 565, 796, 874, 1012
BstMAI GTCTC 2 cut(s) 454, 736
BstMBI GATC 5 cut(s) 413, 562, 793, 871, 1009
BstMWI GCNNNNNNNGC 3 cut(s) 13, 331, 847
BstNSI RCATGY 2 cut(s) 636, 845
BstSFI CTRYAG 2 cut(s) 479, 669
BstV1I GCAGC 3 cut(s) 130, 982, 1039
BstX2I RGATCY 1 cut(s) 413
BstXI CCANNNNNNTGG 1 cut(s) 647
BstYI RGATCY 1 cut(s) 413
Bsu36I CCTNAGG 1 cut(s) 156
BsuI GTATCC 1 cut(s) 647
BsuRI GGCC 1 cut(s) 7
BtgI CCRYGG 1 cut(s) 626
BtrI CACGTC 1 cut(s) 203
BtsCI GGATG 7 cut(s) 115, 379, 472, 550, 658, 988, 1187
BtsIMutI CAGTG 1 cut(s) 130
Cac8I GCNNGC 4 cut(s) 95, 174, 673, 843
CciI TCATGA 1 cut(s) 1128
CfoI GCGC 3 cut(s) 190, 325, 1053
Cfr13I GGNCC 1 cut(s) 5
Csp6I GTAC 2 cut(s) 300, 929
CviAII CATG 5 cut(s) 71, 627, 633, 842, 1129
CviQI GTAC 2 cut(s) 300, 929
DdeI CTNAG 6 cut(s) 23, 78, 156, 219, 491, 1161
DpnI GATC 5 cut(s) 415, 564, 795, 873, 1011
DpnII GATC 5 cut(s) 413, 562, 793, 871, 1009
Eam1104I CTCTTC 2 cut(s) 337, 1071
EarI CTCTTC 2 cut(s) 337, 1071
Eco130I CCWWGG 1 cut(s) 626
Eco47III AGCGCT 1 cut(s) 1052
Eco57I CTGAAG 2 cut(s) 291, 789
Eco81I CCTNAGG 1 cut(s) 156
Eco88I CYCGRG 1 cut(s) 582
EcoO109I RGGNCCY 1 cut(s) 5
EcoT14I CCWWGG 1 cut(s) 626
ErhI CCWWGG 1 cut(s) 626
FaeI CATG 5 cut(s) 74, 630, 636, 845, 1132
FalI AAGNNNNNCTT 2 cut(s) 334, 366
FaqI GGGAC 2 cut(s) 461, 520
FatI CATG 5 cut(s) 70, 626, 632, 841, 1128
FauI CCCGC 1 cut(s) 843
FblI GTMKAC 1 cut(s) 429
Fnu4HI GCNGC 5 cut(s) 144, 778, 971, 1028, 1031
FokI GGATG 7 cut(s) 102, 386, 479, 537, 665, 975, 1174
Fsp4HI GCNGC 5 cut(s) 144, 778, 971, 1028, 1031
FspBI CTAG 1 cut(s) 1034
FspI TGCGCA 1 cut(s) 189
GlaI GCGC 3 cut(s) 189, 324, 1052
GluI GCNGC 5 cut(s) 144, 778, 971, 1028, 1031
GsuI CTGGAG 1 cut(s) 21
HaeII RGCGCY 1 cut(s) 1054
HaeIII GGCC 1 cut(s) 7
HapII CCGG 1 cut(s) 1100
HhaI GCGC 3 cut(s) 190, 325, 1053
Hin1II CATG 5 cut(s) 74, 630, 636, 845, 1132
Hin6I GCGC 3 cut(s) 188, 323, 1051
HinP1I GCGC 3 cut(s) 188, 323, 1051
HindIII AAGCTT 1 cut(s) 221
HinfI GANTC 5 cut(s) 209, 580, 618, 1096, 1172
HpaII CCGG 1 cut(s) 1100
HphI GGTGA 4 cut(s) 259, 726, 835, 1177
Hpy166II GTNNAC 1 cut(s) 430
Hpy188I TCNGA 8 cut(s) 241, 418, 459, 567, 692, 876, 1060, 1123
Hpy188III TCNNGA 8 cut(s) 411, 493, 560, 584, 640, 1007, 1100, 1129
Hpy8I GTNNAC 1 cut(s) 430
HpyAV CCTTC 1 cut(s) 71
HpyCH4III ACNGT 5 cut(s) 125, 304, 362, 434, 999
HpyCH4IV ACGT 1 cut(s) 202
HpyCH4V TGCA 6 cut(s) 231, 671, 719, 841, 1027, 1157
HpyF10VI GCNNNNNNNGC 3 cut(s) 13, 331, 847
HpyF3I CTNAG 6 cut(s) 23, 78, 156, 219, 491, 1161
HpySE526I ACGT 1 cut(s) 202
Hsp92II CATG 5 cut(s) 74, 630, 636, 845, 1132
HspAI GCGC 3 cut(s) 188, 323, 1051
Kpn2I TCCGGA 1 cut(s) 1099
Kzo9I GATC 5 cut(s) 413, 562, 793, 871, 1009
LmnI GCTCC 6 cut(s) 40, 55, 193, 586, 967, 1048
Lsp1109I GCAGC 3 cut(s) 130, 982, 1039
LweI GCATC 1 cut(s) 643
MaeI CTAG 1 cut(s) 1034
MaeII ACGT 1 cut(s) 202
MaeIII GTNAC 4 cut(s) 214, 274, 362, 1015
MalI GATC 5 cut(s) 415, 564, 795, 873, 1011
MboI GATC 5 cut(s) 413, 562, 793, 871, 1009
MboII GAAGA 5 cut(s) 218, 354, 782, 1088, 1131
MflI RGATCY 1 cut(s) 413
MhlI GDGCHC 3 cut(s) 37, 60, 591
MluCI AATT 5 cut(s) 149, 283, 725, 815, 1132
MlyI GAGTC 2 cut(s) 574, 1181
MmeI TCCRAC 1 cut(s) 892
MroI TCCGGA 1 cut(s) 1099
MroXI GAANNNNTTC 3 cut(s) 397, 500, 704
MseI TTAA 3 cut(s) 102, 135, 711
MslI CAYNNNNRTG 2 cut(s) 72, 631
MspA1I CMGCKG 1 cut(s) 1030
MspI CCGG 1 cut(s) 1100
Mva1269I GAATGC 1 cut(s) 779
MwoI GCNNNNNNNGC 3 cut(s) 13, 331, 847
NcoI CCATGG 1 cut(s) 626
NdeII GATC 5 cut(s) 413, 562, 793, 871, 1009
NlaIII CATG 5 cut(s) 74, 630, 636, 845, 1132
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 3 cut(s) 214, 274, 362
NsbI TGCGCA 1 cut(s) 189
NspI RCATGY 2 cut(s) 636, 845
PaeI GCATGC 1 cut(s) 845
PagI TCATGA 1 cut(s) 1128
PciI ACATGT 1 cut(s) 632
PctI GAATGC 1 cut(s) 779
PdmI GAANNNNTTC 3 cut(s) 397, 500, 704
PfeI GAWTC 3 cut(s) 209, 618, 1096
PkrI GCNGC 5 cut(s) 145, 779, 972, 1029, 1032
PleI GAGTC 2 cut(s) 574, 1180
PpsI GAGTC 2 cut(s) 574, 1180
PscI ACATGT 1 cut(s) 632
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 5
PstI CTGCAG 1 cut(s) 673
PsuI RGATCY 1 cut(s) 413
RsaI GTAC 2 cut(s) 301, 930
RsaNI GTAC 2 cut(s) 300, 929
RseI CAYNNNNRTG 2 cut(s) 72, 631
SaqAI TTAA 3 cut(s) 102, 135, 711
SatI GCNGC 5 cut(s) 144, 778, 971, 1028, 1031
Sau3AI GATC 5 cut(s) 413, 562, 793, 871, 1009
Sau96I GGNCC 1 cut(s) 5
SbfI CCTGCAGG 1 cut(s) 673
SchI GAGTC 2 cut(s) 574, 1181
SdaI CCTGCAGG 1 cut(s) 673
SduI GDGCHC 3 cut(s) 37, 60, 591
SfaNI GCATC 1 cut(s) 643
SfcI CTRYAG 2 cut(s) 479, 669
SmiMI CAYNNNNRTG 2 cut(s) 72, 631
SphI GCATGC 1 cut(s) 845
Sse8387I CCTGCAGG 1 cut(s) 673
Sse9I AATT 5 cut(s) 149, 283, 725, 815, 1132
SsiI CCGC 4 cut(s) 371, 778, 850, 1030
SspMI CTAG 1 cut(s) 1034
StyI CCWWGG 1 cut(s) 626
TaaI ACNGT 5 cut(s) 125, 304, 362, 434, 999
TaiI ACGT 1 cut(s) 205
TaqI TCGA 1 cut(s) 621
TasI AATT 5 cut(s) 149, 283, 725, 815, 1132
TatI WGTACW 1 cut(s) 928
TauI GCSGC 2 cut(s) 780, 1033
TfiI GAWTC 3 cut(s) 209, 618, 1096
Tru1I TTAA 3 cut(s) 102, 135, 711
Tru9I TTAA 3 cut(s) 102, 135, 711
TscAI CASTG 1 cut(s) 130
TseFI GTSAC 3 cut(s) 214, 274, 362
TseI GCWGC 3 cut(s) 143, 970, 1027
Tsp45I GTSAC 3 cut(s) 214, 274, 362
TspDTI ATGAA 6 cut(s) 215, 539, 697, 1109, 1117, 1145
TspGWI ACGGA 1 cut(s) 522
TspRI CASTG 1 cut(s) 130
XapI RAATTY 2 cut(s) 149, 1132
XceI RCATGY 2 cut(s) 636, 845
XmiI GTMKAC 1 cut(s) 429
XmnI GAANNNNTTC 3 cut(s) 397, 500, 704
XspI CTAG 1 cut(s) 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.