Rh1AG199400

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000280
Physical Location & Seq
Reverse (-)
37963540 .. 37967029
3490 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG199400.1

Sequence Viewer

Length: 1428 bp
ATGAAGAGAGACGGCGTAAAGCAAGCTTATGATGACCCAGAACCCACATTTCCAGAGAAAGACGAGGGCTTTTTAGAAAACCAGAGTCACATGGCTGAGATTGTGAAGAAGAAGCGTAGTAGTAGGAAGAGAGCTACAGGGAAGGGATTGGCAGCCGTGAATGGCCCAAGGGATTGTGAGAAAGGAATTCTATCATGTGCCGCCAACTGGGGTCGGAAGGGGTTTAGGCGCGTGAGACCACGCAATGCTGCAAAGTGGATTGAGGATTGTTTAGAGTGCCTTCACTGTCAGGGAAATGATGAGGGCAGAGTTGTTTGCTGTGGAAGTTGCAAAAGAAAATGGTATCCTCAGATGTTAGAGGATGCCATTGCTGAGGCTTGTCCTGGATGCTGTGGTAATTGCAGTTGCAAAGCATGTTTGTGTGCAGCTTCTAGAAATTTGAAGAAACAGCCGGAGTTGAATATTAGCAAAGAGGAAAAACTCGAGCACTCTAAGTATTTGCTTCAAGCATTGCTTCCACTATTAAAACGACTTAACGATGAGCAAGTGATTGAGATGGAGATGGAGGCTAGGAGACAAGGGCTGTCTGTTTCGGAGTTAAAGATCCAAAGGTCAAACTGCTCTTATGATGAGCGTGTGAATTGTAACAACTGCAAAGCTTCAATTGTTGATTTGTATAGAAGCTGCAATTTATGCTCATATGATCTTTGCCTAACGTGTTGCCGGGAGAGTCGAGATCGACACCTGGATGGAGGTGGGAAGGAAGTGACTATGGTGTATATCAATCAGGACCTAGAACATTTGCATGGTGGAAAGGGGAACATAGCAGAACTACTGTTTGAACCTAGCCCCAAGTGTCATGTTAGGTTAAAATCTGAATGGAAATCCAATGAAGATGGTAGCATCCTTTGCCCTCCAGAGGACAGGGATGGCTGTGGTCATGGTCATCTGGAATTGAGATGCATGTCTTTTGAGAATAAGGTCGGTGAGTTGGTACAGAAAGCAGAAGAGATGGCTGAAATTTACAAACTTATGCATGCGGCAGAAACTTCTGCACAGTGGTGTTCATGTTTCAATTCTTTGGATGTTTTTGATTCAATCAGCAACACCAAAAAGTTAAGGAAAGGAGATTCTCAAGAGGACTTTGATGACAACTATTTGTACTGCCCAAGAGCTGGAAATATCCAACGTGAGGATCTTAAGCATTTCCAATGGCATTGGCTCAGGGGTGAGCCTGTGATTGTTAGCAATGTAATTGAAACTACATCAGGTATGTGGCCTGCTTGTCGTCAGATGCAACAGACTATGCATGGTAAATATTTAACAATCAAGGCCATTGATTGCCTGGATTGGTGCAAGCTAGAGAAGTTGAGAAGATATATTGGTACTGGAGTTGTCATCAATTCAGCAAGATATCAGTATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

475

Amino Acids

54.15

Weight (kDa)

7.81

Isoelectric Point (pI)

57.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000280)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07610 AT3G07610 AT3G07610
fragaria_vesca FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24540 FvH4_5g24640 FvH4_5g29990 FvH4_5g29990 FvH4_5g29990 FvH4_7g06860 FvH4_7g09570 FvH4_7g09571 FvH4_7g09571
malus_domestica MD05G1184100.v1.1 MD06G1012500.v1.1 MD07G1099600.v1.1 MD07G1099700.v1.1
prunus_persica Prupe.2G123400_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1 Prupe.5G015100_v2.0.a1
pyrus_communis pycom06g01040 pycom10g12640
rosa_chinensis RchiOBHm_Chr1g0346431 RchiOBHm_Chr1g0346441 RchiOBHm_Chr3g0461961 RchiOBHm_Chr3g0461971 RchiOBHm_Chr3g0461991 RchiOBHm_Chr3g0462031 RchiOBHm_Chr3g0462041 RchiOBHm_Chr7g0215021 RchiOBHm_Chr7g0223871 RchiOBHm_Chr7g0223931 RchiOBHm_Chr7g0223991 RchiOBHm_Chr7g0224011 RchiOBHm_Chr7g0224041
rosa_laevigata RLG00000001919 RLG00000001920 RLG00000001924 RLG00000002699 RLG00000024884 RLG00000024888 RLG00000024889 RLG00000028799 RLG00000028800
rosa_multiflora Rmu_co8191480.1_g000001 Rmu_co8411417.1_g000001 Rmu_co8440445.1_g000001 Rmu_co8460737.1_g000001 Rmu_sc0003363.1_g000077 Rmu_sc0004308.1_g000026 Rmu_sc0004540.1_g000014 Rmu_sc0004540.1_g000026 Rmu_sc0007736.1_g000006 Rmu_sc0007736.1_g000008 Rmu_sc0007777.1_g000006 Rmu_sc0007777.1_g000009 Rmu_sc0007777.1_g000029 Rmu_sc0008432.1_g000002 Rmu_sc0008835.1_g000002 Rmu_sc0029902.1_g000002
rosa_roxburghii Rroxscaffold_3G00235160 Rroxscaffold_3G00235180 Rroxscaffold_3G00235210 Rroxscaffold_3G00244660 Rroxscaffold_4G00308520 Rroxscaffold_4G00308530 Rroxscaffold_6G00417830 Rroxscaffold_6G00417840
rosa_rugosa Rorug01G0179700 Rorug01G0179800 Rorug07G0149600 Rorug07G0221000 Rorug07G0221100 Rorug07G0221100
rosa_samantha Rh1AG199200 Rh1AG199300 Rh1AG199400 Rh1BG165100 Rh1BG165200 Rh1BG165300 Rh1BG165400 Rh1CG184300 Rh1CG184400 Rh1DG195800 Rh1DG195900 Rh1DG196000 Rh2BG420000 Rh3AG112800 Rh3BG115600 Rh3BG115700 Rh3BG115800 Rh3BG115900 Rh3CG117900 Rh3CG118300 Rh3CG118400 Rh3CG118500 Rh3DG117400 Rh3DG117500 Rh3DG117600 Rh6AG306600 Rh6BG312200 Rh7BG278000 Rh7BG355000 Rh7BG355400 Rh7BG355800 Rh7BG355900 Rh7BG356400 Rh7CG305900 Rh7CG382300 Rh7CG382800 Rh7CG383400 Rh7CG383500 Rh7DG290000 Rh7DG358300 Rh7DG358500 Rh7DG359600 Rh7DG359800
rosa_wichuraiana Rw0G007860 Rw1G016720 Rw1G016730 Rw7G024430 Rw7G030900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1175
AccII CGCG 1 cut(s) 231
AciI CCGC 2 cut(s) 201, 1040
AclWI GGATC 2 cut(s) 598, 1203
AcsI RAATTY 3 cut(s) 186, 436, 1020
AfaI GTAC 3 cut(s) 996, 1163, 1387
AfiI CCNNNNNNNGG 4 cut(s) 207, 919, 1175, 1192
AflII CTTAAG 1 cut(s) 1199
AflIII ACRYGT 1 cut(s) 716
AgsI TTSAA 8 cut(s) 442, 460, 506, 663, 842, 1075, 1098, 1259
AjnI CCWGG 3 cut(s) 382, 744, 1344
AleI CACNNNNGTG 1 cut(s) 1060
AluBI AGCT 7 cut(s) 26, 134, 428, 659, 684, 1175, 1360
AluI AGCT 7 cut(s) 26, 134, 428, 659, 684, 1175, 1360
Alw21I GWGCWC 1 cut(s) 489
Alw26I GTCTC 3 cut(s) 3, 229, 568
AlwI GGATC 2 cut(s) 598, 1203
Ama87I CYCGRG 1 cut(s) 482
AoxI GGCC 3 cut(s) 163, 1277, 1332
ApeKI GCWGC 4 cut(s) 152, 248, 425, 684
ApoI RAATTY 3 cut(s) 186, 436, 1020
AspLEI GCGC 1 cut(s) 231
AspS9I GGNCC 2 cut(s) 164, 790
AsuC2I CCSGG 1 cut(s) 725
AsuHPI GGTGA 2 cut(s) 998, 1241
AvaI CYCGRG 1 cut(s) 482
AvaII GGWCC 1 cut(s) 790
BaeI ACNNNNGTAYC 2 cut(s) 1377, 1410
Bbv12I GWGCWC 1 cut(s) 489
BbvCI CCTCAGC 1 cut(s) 372
BbvI GCAGC 4 cut(s) 164, 235, 437, 671
BccI CCATC 6 cut(s) 550, 556, 743, 890, 923, 1006
BceAI ACGGC 2 cut(s) 28, 140
BciT130I CCWGG 3 cut(s) 384, 746, 1346
BciVI GTATCC 1 cut(s) 354
BcnI CCSGG 1 cut(s) 725
BcoDI GTCTC 3 cut(s) 3, 229, 568
BfaI CTAG 5 cut(s) 432, 570, 794, 846, 1361
BfmI CTRYAG 1 cut(s) 135
BfrI CTTAAG 1 cut(s) 1199
BfuI GTATCC 1 cut(s) 354
BisI GCNGC 6 cut(s) 153, 201, 249, 426, 685, 1041
BlsI GCNGC 6 cut(s) 154, 202, 250, 427, 686, 1042
Bme1390I CCNGG 4 cut(s) 384, 725, 746, 1346
Bme18I GGWCC 1 cut(s) 790
BmeT110I CYCGRG 1 cut(s) 482
BmgT120I GGNCC 2 cut(s) 164, 790
BmrFI CCNGG 4 cut(s) 384, 725, 746, 1346
BmrI ACTGGG 1 cut(s) 217
BmsI GCATC 5 cut(s) 352, 377, 912, 950, 1284
BmuI ACTGGG 1 cut(s) 217
BpmI CTGGAG 2 cut(s) 900, 1410
Bpu10I CCTNAGC 2 cut(s) 372, 1223
BpuEI CTTGAG 1 cut(s) 1119
BpuMI CCSGG 1 cut(s) 725
BsaI GGTCTC 1 cut(s) 229
BsaJI CCNNGG 1 cut(s) 167
Bsc4I CCNNNNNNNGG 4 cut(s) 207, 919, 1175, 1192
Bse1I ACTGG 2 cut(s) 212, 1393
Bse3DI GCAATG 4 cut(s) 250, 366, 509, 1255
BseBI CCWGG 3 cut(s) 384, 746, 1346
BseDI CCNNGG 1 cut(s) 167
BseGI GGATG 6 cut(s) 367, 392, 754, 903, 934, 1090
BseLI CCNNNNNNNGG 4 cut(s) 207, 919, 1175, 1192
BseMI GCAATG 4 cut(s) 250, 366, 509, 1255
BseMII CTCAG 4 cut(s) 87, 362, 363, 1237
BseNI ACTGG 2 cut(s) 212, 1393
BseXI GCAGC 4 cut(s) 164, 235, 437, 671
BsgI GTGCAG 2 cut(s) 444, 1038
Bsh1236I CGCG 1 cut(s) 231
BshFI GGCC 3 cut(s) 165, 1279, 1334
BsiHKAI GWGCWC 1 cut(s) 489
BsiHKCI CYCGRG 1 cut(s) 482
BsiSI CCGG 2 cut(s) 452, 724
BslI CCNNNNNNNGG 4 cut(s) 207, 919, 1175, 1192
BsmAI GTCTC 3 cut(s) 3, 229, 568
BsmBI CGTCTC 1 cut(s) 3
BsnI GGCC 3 cut(s) 165, 1279, 1334
Bso31I GGTCTC 1 cut(s) 229
BsoBI CYCGRG 1 cut(s) 482
Bsp1286I GDGCHC 1 cut(s) 489
Bsp143I GATC 4 cut(s) 603, 703, 736, 1195
BspACI CCGC 2 cut(s) 201, 1040
BspANI GGCC 3 cut(s) 165, 1279, 1334
BspCNI CTCAG 4 cut(s) 88, 361, 364, 1236
BspFNI CGCG 1 cut(s) 231
BspPI GGATC 2 cut(s) 598, 1203
BspTI CTTAAG 1 cut(s) 1199
BspTNI GGTCTC 1 cut(s) 229
BsrDI GCAATG 4 cut(s) 250, 366, 509, 1255
BsrI ACTGG 2 cut(s) 212, 1393
BssECI CCNNGG 1 cut(s) 167
BssMI GATC 4 cut(s) 603, 703, 736, 1195
BssT1I CCWWGG 1 cut(s) 167
Bst2UI CCWGG 3 cut(s) 384, 746, 1346
Bst4CI ACNGT 3 cut(s) 287, 837, 1059
Bst6I CTCTTC 2 cut(s) 122, 1002
BstAFI CTTAAG 1 cut(s) 1199
BstAPI GCANNNNNTGC 2 cut(s) 693, 909
BstC8I GCNNGC 4 cut(s) 24, 1038, 1281, 1358
BstDEI CTNAG 5 cut(s) 96, 348, 372, 492, 1223
BstF5I GGATG 6 cut(s) 367, 392, 754, 903, 934, 1090
BstFNI CGCG 1 cut(s) 231
BstHHI GCGC 1 cut(s) 231
BstKTI GATC 4 cut(s) 606, 706, 739, 1198
BstMAI GTCTC 3 cut(s) 3, 229, 568
BstMBI GATC 4 cut(s) 603, 703, 736, 1195
BstMWI GCNNNNNNNGC 2 cut(s) 693, 909
BstNI CCWGG 3 cut(s) 384, 746, 1346
BstNSI RCATGY 3 cut(s) 417, 967, 1040
BstSCI CCNGG 4 cut(s) 382, 723, 744, 1344
BstSFI CTRYAG 1 cut(s) 135
BstUI CGCG 1 cut(s) 231
BstV1I GCAGC 4 cut(s) 164, 235, 437, 671
BstX2I RGATCY 2 cut(s) 603, 1195
BstYI RGATCY 2 cut(s) 603, 1195
BsuI GTATCC 1 cut(s) 354
BsuRI GGCC 3 cut(s) 165, 1279, 1334
BtsCI GGATG 6 cut(s) 367, 392, 754, 903, 934, 1090
BtsIMutI CAGTG 2 cut(s) 283, 1064
Cac8I GCNNGC 4 cut(s) 24, 1038, 1281, 1358
CfoI GCGC 1 cut(s) 231
Cfr13I GGNCC 2 cut(s) 164, 790
Csp6I GTAC 3 cut(s) 995, 1162, 1386
CviQI GTAC 3 cut(s) 995, 1162, 1386
DdeI CTNAG 5 cut(s) 96, 348, 372, 492, 1223
DpnI GATC 4 cut(s) 605, 705, 738, 1197
DpnII GATC 4 cut(s) 603, 703, 736, 1195
Eam1104I CTCTTC 2 cut(s) 122, 1002
EarI CTCTTC 2 cut(s) 122, 1002
Eco130I CCWWGG 1 cut(s) 167
Eco31I GGTCTC 1 cut(s) 229
Eco32I GATATC 1 cut(s) 1415
Eco47I GGWCC 1 cut(s) 790
Eco88I CYCGRG 1 cut(s) 482
EcoO109I RGGNCCY 1 cut(s) 790
EcoRI GAATTC 1 cut(s) 186
EcoRII CCWGG 3 cut(s) 382, 744, 1344
EcoRV GATATC 1 cut(s) 1415
EcoT14I CCWWGG 1 cut(s) 167
EcoT22I ATGCAT 3 cut(s) 965, 1038, 1311
ErhI CCWWGG 1 cut(s) 167
Esp3I CGTCTC 1 cut(s) 3
FalI AAGNNNNNCTT 2 cut(s) 498, 530
FauNDI CATATG 1 cut(s) 700
Fnu4HI GCNGC 6 cut(s) 153, 201, 249, 426, 685, 1041
FokI GGATG 6 cut(s) 374, 399, 761, 890, 941, 1097
Fsp4HI GCNGC 6 cut(s) 153, 201, 249, 426, 685, 1041
FspBI CTAG 5 cut(s) 432, 570, 794, 846, 1361
GlaI GCGC 1 cut(s) 230
GluI GCNGC 6 cut(s) 153, 201, 249, 426, 685, 1041
GsuI CTGGAG 2 cut(s) 900, 1410
HaeIII GGCC 3 cut(s) 165, 1279, 1334
HapII CCGG 2 cut(s) 452, 724
HhaI GCGC 1 cut(s) 231
Hin6I GCGC 1 cut(s) 229
HinP1I GCGC 1 cut(s) 229
HindIII AAGCTT 2 cut(s) 24, 657
HinfI GANTC 4 cut(s) 85, 730, 1094, 1130
HpaII CCGG 2 cut(s) 452, 724
HphI GGTGA 2 cut(s) 998, 1241
Hpy188I TCNGA 5 cut(s) 216, 351, 595, 877, 1293
Hpy188III TCNNGA 7 cut(s) 53, 432, 734, 788, 917, 950, 1136
HpyAV CCTTC 4 cut(s) 136, 211, 290, 754
HpyCH4III ACNGT 3 cut(s) 287, 837, 1059
HpyCH4IV ACGT 2 cut(s) 716, 1189
HpyF10VI GCNNNNNNNGC 2 cut(s) 693, 909
HpyF3I CTNAG 5 cut(s) 96, 348, 372, 492, 1223
HpySE526I ACGT 2 cut(s) 716, 1189
HspAI GCGC 1 cut(s) 229
Kzo9I GATC 4 cut(s) 603, 703, 736, 1195
Lsp1109I GCAGC 4 cut(s) 164, 235, 437, 671
LweI GCATC 5 cut(s) 352, 377, 912, 950, 1284
MaeI CTAG 5 cut(s) 432, 570, 794, 846, 1361
MaeII ACGT 2 cut(s) 716, 1189
MaeIII GTNAC 3 cut(s) 86, 644, 766
MalI GATC 4 cut(s) 605, 705, 738, 1197
MboI GATC 4 cut(s) 603, 703, 736, 1195
MboII GAAGA 8 cut(s) 16, 118, 121, 139, 454, 905, 1019, 1386
MfeI CAATTG 1 cut(s) 663
MflI RGATCY 2 cut(s) 603, 1195
MhlI GDGCHC 1 cut(s) 489
MlyI GAGTC 2 cut(s) 94, 739
MmeI TCCRAC 2 cut(s) 194, 1210
Mph1103I ATGCAT 3 cut(s) 965, 1038, 1311
MseI TTAA 7 cut(s) 524, 534, 599, 869, 1118, 1200, 1322
MslI CAYNNNNRTG 4 cut(s) 418, 747, 804, 1060
MspCI CTTAAG 1 cut(s) 1199
MspI CCGG 2 cut(s) 452, 724
MspR9I CCNGG 4 cut(s) 384, 725, 746, 1346
MunI CAATTG 1 cut(s) 663
MvaI CCWGG 3 cut(s) 384, 746, 1346
MvnI CGCG 1 cut(s) 231
MwoI GCNNNNNNNGC 2 cut(s) 693, 909
NciI CCSGG 1 cut(s) 725
NdeI CATATG 1 cut(s) 700
NdeII GATC 4 cut(s) 603, 703, 736, 1195
NmuCI GTSAC 2 cut(s) 86, 766
NsiI ATGCAT 3 cut(s) 965, 1038, 1311
NspI RCATGY 3 cut(s) 417, 967, 1040
OliI CACNNNNGTG 1 cut(s) 1060
PaeI GCATGC 1 cut(s) 1040
PaeR7I CTCGAG 1 cut(s) 482
PfeI GAWTC 2 cut(s) 1094, 1130
PflMI CCANNNNNTGG 1 cut(s) 1175
PfoI TCCNGGA 1 cut(s) 382
PkrI GCNGC 6 cut(s) 154, 202, 250, 427, 686, 1042
PleI GAGTC 2 cut(s) 93, 738
PpsI GAGTC 2 cut(s) 93, 738
PpuMI RGGWCCY 1 cut(s) 790
Psp5II RGGWCCY 1 cut(s) 790
Psp6I CCWGG 3 cut(s) 382, 744, 1344
PspGI CCWGG 3 cut(s) 382, 744, 1344
PspPI GGNCC 2 cut(s) 164, 790
PspPPI RGGWCCY 1 cut(s) 790
PspXI VCTCGAGB 1 cut(s) 482
PsuI RGATCY 2 cut(s) 603, 1195
RsaI GTAC 3 cut(s) 996, 1163, 1387
RsaNI GTAC 3 cut(s) 995, 1162, 1386
RseI CAYNNNNRTG 4 cut(s) 418, 747, 804, 1060
SaqAI TTAA 7 cut(s) 524, 534, 599, 869, 1118, 1200, 1322
SatI GCNGC 6 cut(s) 153, 201, 249, 426, 685, 1041
Sau3AI GATC 4 cut(s) 603, 703, 736, 1195
Sau96I GGNCC 2 cut(s) 164, 790
SchI GAGTC 2 cut(s) 94, 739
ScrFI CCNGG 4 cut(s) 384, 725, 746, 1346
SduI GDGCHC 1 cut(s) 489
SfaNI GCATC 5 cut(s) 352, 377, 912, 950, 1284
SfcI CTRYAG 1 cut(s) 135
Sfr274I CTCGAG 1 cut(s) 482
SinI GGWCC 1 cut(s) 790
SlaI CTCGAG 1 cut(s) 482
SmiMI CAYNNNNRTG 4 cut(s) 418, 747, 804, 1060
SmlI CTYRAG 3 cut(s) 482, 1134, 1199
SmoI CTYRAG 3 cut(s) 482, 1134, 1199
SphI GCATGC 1 cut(s) 1040
SsiI CCGC 2 cut(s) 201, 1040
SspI AATATT 2 cut(s) 463, 1319
SspMI CTAG 5 cut(s) 432, 570, 794, 846, 1361
StyD4I CCNGG 4 cut(s) 382, 723, 744, 1344
StyI CCWWGG 1 cut(s) 167
TaaI ACNGT 3 cut(s) 287, 837, 1059
TaiI ACGT 2 cut(s) 719, 1192
TaqI TCGA 3 cut(s) 483, 733, 739
TatI WGTACW 1 cut(s) 1161
TauI GCSGC 2 cut(s) 203, 1043
TfiI GAWTC 2 cut(s) 1094, 1130
Tru1I TTAA 7 cut(s) 524, 534, 599, 869, 1118, 1200, 1322
Tru9I TTAA 7 cut(s) 524, 534, 599, 869, 1118, 1200, 1322
TscAI CASTG 2 cut(s) 290, 1064
TseFI GTSAC 2 cut(s) 86, 766
TseI GCWGC 4 cut(s) 152, 248, 425, 684
Tsp45I GTSAC 2 cut(s) 86, 766
TspDTI ATGAA 3 cut(s) 17, 906, 1056
TspRI CASTG 2 cut(s) 290, 1064
Van91I CCANNNNNTGG 1 cut(s) 1175
Vha464I CTTAAG 1 cut(s) 1199
VpaK11BI GGWCC 1 cut(s) 790
XapI RAATTY 3 cut(s) 186, 436, 1020
XbaI TCTAGA 1 cut(s) 431
XceI RCATGY 3 cut(s) 417, 967, 1040
XcmI CCANNNNNNNNNTGG 1 cut(s) 1342
XhoI CTCGAG 1 cut(s) 482
XspI CTAG 5 cut(s) 432, 570, 794, 846, 1361
Zsp2I ATGCAT 3 cut(s) 965, 1038, 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.