AT3G09120

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000148
Physical Location & Seq
Reverse (-)
2796958 .. 2798764
1807 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G09120.1

Sequence Viewer

Length: 945 bp
ATGGCTAAGAGTGAGAAGATTAGCTTGAAACTTCTCGTTGATGAGAAAAAAAACAAGGTTGTTTTGGCTGAGGCTGGTCAAGATTTTGTTGATGTGCTCTTTGGTCTCTTGACATTCCCAATGGGGACTATTGCAAGATTGCTGGAGAAGCATCAGAAGTTACCACAAATCCTAGGATGTTACAAGAATCTTAGTCGAAGTGTTTCAGATATGGCCGTTGATGATTTCAAGACCGAGGCTTGTAAGAGTATGTTGCTTTCTCCAAAGAGCTCCATGGAGATCCATTGCAGAAGACTCAAACTGCACATTGATGATACTCAGGCTACAATGTTCTATGTATGCTCAAAAAAGCATGAGAGCGACTCAAGTAAGTATAGCAATTTTTACAAATCAAGATGTAGCTGTGGATCTTTGATGATCTATCAGATTCATGTTCCAGAAGATGAGCAAGTTGTAGACTCGTTAGGAAATGCTGAAGATGTTGTGTTTGTTAGCTGTAGATCATCTTTCATTCTGACAGATGATTTGAAAGTGATGTTGAATTCTATCGATGAAATAGTCAAGGTTCTCAATGGCCTAGGATATCCAAATATAAACGATCTTAAGGAAATGCTCATTGATGTTGGCTCTGAAGAGGTTTTGTCTCTACTGGGGAATTTATTCACTTCAGAGTCTGCCTTGACAAGCACATTCCTCATGAAACAGTGTATGACGACGATGCTTACACTGTCACCTCCACCAATGTTCAAAACTGGACGGGTAGAACAGGGCAGTGGATGCCATATTAAAGTGTTCGTTGGAAAGTTAGACAGAAAGATTCTTTATGCTGAGTGCAGTGAAGACTTCATTGATTCTCTTCTCACTTTTCTTGTTCTGCCTCTCGAGTCGGCGTCTTCGTTCTTCGAAGACAATACCATTATCGGATGTGTAAAGAATTTGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

314

Amino Acids

35.07

Weight (kDa)

5.48

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 4 - 314 3.6e-112 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 456
AclWI GGATC 2 cut(s) 274, 415
AcoI YGGCCR 1 cut(s) 213
AcsI RAATTY 3 cut(s) 541, 655, 934
AcuI CTGAAG 3 cut(s) 495, 651, 651
AcyI GRCGYC 1 cut(s) 890
AflII CTTAAG 1 cut(s) 602
AgsI TTSAA 5 cut(s) 28, 229, 529, 541, 748
AluBI AGCT 4 cut(s) 24, 270, 402, 495
AluI AGCT 4 cut(s) 24, 270, 402, 495
Alw21I GWGCWC 2 cut(s) 99, 272
Alw26I GTCTC 2 cut(s) 110, 648
AlwI GGATC 2 cut(s) 274, 415
AlwNI CAGNNNCTG 1 cut(s) 674
Ama87I CYCGRG 1 cut(s) 881
AoxI GGCC 2 cut(s) 213, 574
ApoI RAATTY 3 cut(s) 541, 655, 934
ArsI GACNNNNNNTTYG 2 cut(s) 508, 540
Asp700I GAANNNNTTC 2 cut(s) 202, 659
AspA2I CCTAGG 2 cut(s) 172, 577
AsuHPI GGTGA 1 cut(s) 723
AsuII TTCGAA 1 cut(s) 903
AvaI CYCGRG 1 cut(s) 881
AvrII CCTAGG 2 cut(s) 172, 577
BanII GRGCYC 1 cut(s) 272
BbsI GAAGAC 4 cut(s) 298, 846, 885, 912
Bbv12I GWGCWC 2 cut(s) 99, 272
BbvCI CCTCAGC 1 cut(s) 69
BceAI ACGGC 1 cut(s) 200
BcoDI GTCTC 2 cut(s) 110, 648
BfaI CTAG 2 cut(s) 173, 578
BfmI CTRYAG 1 cut(s) 496
BfrI CTTAAG 1 cut(s) 602
BlnI CCTAGG 2 cut(s) 172, 577
BmeT110I CYCGRG 1 cut(s) 881
BmrI ACTGGG 1 cut(s) 659
BmsI GCATC 3 cut(s) 160, 708, 767
BmuI ACTGGG 1 cut(s) 659
BpiI GAAGAC 4 cut(s) 298, 846, 885, 912
BplI GAGNNNNNCTC 2 cut(s) 347, 379
BpmI CTGGAG 1 cut(s) 164
Bpu10I CCTNAGC 1 cut(s) 69
Bpu14I TTCGAA 1 cut(s) 903
BpuEI CTTGAG 1 cut(s) 349
Bsa29I ATCGAT 1 cut(s) 549
BsaHI GRCGYC 1 cut(s) 890
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 4 cut(s) 172, 234, 273, 577
Bse1I ACTGG 2 cut(s) 654, 757
Bse3DI GCAATG 1 cut(s) 283
BseCI ATCGAT 1 cut(s) 549
BseDI CCNNGG 4 cut(s) 172, 234, 273, 577
BseGI GGATG 3 cut(s) 182, 782, 929
BseMI GCAATG 1 cut(s) 283
BseMII CTCAG 3 cut(s) 60, 332, 819
BseNI ACTGG 2 cut(s) 654, 757
BsgI GTGCAG 2 cut(s) 287, 853
BshFI GGCC 2 cut(s) 215, 576
BshVI ATCGAT 1 cut(s) 549
BsiHKAI GWGCWC 2 cut(s) 99, 272
BsiHKCI CYCGRG 1 cut(s) 881
BslFI GGGAC 1 cut(s) 139
BsmAI GTCTC 2 cut(s) 110, 648
BsmFI GGGAC 1 cut(s) 139
BsnI GGCC 2 cut(s) 215, 576
Bso31I GGTCTC 1 cut(s) 110
BsoBI CYCGRG 1 cut(s) 881
Bsp119I TTCGAA 1 cut(s) 903
Bsp1286I GDGCHC 2 cut(s) 99, 272
Bsp143I GATC 5 cut(s) 279, 407, 417, 500, 598
Bsp19I CCATGG 1 cut(s) 273
BspANI GGCC 2 cut(s) 215, 576
BspCNI CTCAG 3 cut(s) 61, 331, 820
BspDI ATCGAT 1 cut(s) 549
BspHI TCATGA 1 cut(s) 696
BspPI GGATC 2 cut(s) 274, 415
BspT104I TTCGAA 1 cut(s) 903
BspTI CTTAAG 1 cut(s) 602
BspTNI GGTCTC 1 cut(s) 110
BsrDI GCAATG 1 cut(s) 283
BsrI ACTGG 2 cut(s) 654, 757
BssECI CCNNGG 4 cut(s) 172, 234, 273, 577
BssMI GATC 5 cut(s) 279, 407, 417, 500, 598
BssNI GRCGYC 1 cut(s) 890
BssT1I CCWWGG 3 cut(s) 172, 273, 577
Bst4CI ACNGT 2 cut(s) 705, 729
Bst6I CTCTTC 2 cut(s) 627, 861
BstACI GRCGYC 1 cut(s) 890
BstAFI CTTAAG 1 cut(s) 602
BstAPI GCANNNNNTGC 1 cut(s) 777
BstBI TTCGAA 1 cut(s) 903
BstDEI CTNAG 5 cut(s) 6, 69, 191, 318, 828
BstDSI CCRYGG 1 cut(s) 273
BstF5I GGATG 3 cut(s) 182, 782, 929
BstKTI GATC 5 cut(s) 282, 410, 420, 503, 601
BstMAI GTCTC 2 cut(s) 110, 648
BstMBI GATC 5 cut(s) 279, 407, 417, 500, 598
BstMWI GCNNNNNNNGC 2 cut(s) 148, 777
BstSFI CTRYAG 1 cut(s) 496
BstV2I GAAGAC 4 cut(s) 298, 846, 885, 912
BstX2I RGATCY 2 cut(s) 279, 407
BstYI RGATCY 2 cut(s) 279, 407
Bsu15I ATCGAT 1 cut(s) 549
BsuRI GGCC 2 cut(s) 215, 576
BsuTUI ATCGAT 1 cut(s) 549
BtgI CCRYGG 1 cut(s) 273
BtsCI GGATG 3 cut(s) 182, 782, 929
BtsI GCAGTG 2 cut(s) 778, 841
BtsIMutI CAGTG 4 cut(s) 710, 725, 778, 841
CaiI CAGNNNCTG 1 cut(s) 674
CciI TCATGA 1 cut(s) 696
ClaI ATCGAT 1 cut(s) 549
CseI GACGC 1 cut(s) 879
CviAII CATG 4 cut(s) 274, 353, 431, 697
DdeI CTNAG 5 cut(s) 6, 69, 191, 318, 828
DpnI GATC 5 cut(s) 281, 409, 419, 502, 600
DpnII GATC 5 cut(s) 279, 407, 417, 500, 598
EaeI YGGCCR 1 cut(s) 213
Eam1104I CTCTTC 2 cut(s) 627, 861
EarI CTCTTC 2 cut(s) 627, 861
Ecl136II GAGCTC 1 cut(s) 270
Eco130I CCWWGG 3 cut(s) 172, 273, 577
Eco24I GRGCYC 1 cut(s) 272
Eco31I GGTCTC 1 cut(s) 110
Eco32I GATATC 1 cut(s) 584
Eco53kI GAGCTC 1 cut(s) 270
Eco57I CTGAAG 3 cut(s) 495, 651, 651
Eco88I CYCGRG 1 cut(s) 881
EcoICRI GAGCTC 1 cut(s) 270
EcoRI GAATTC 1 cut(s) 541
EcoRV GATATC 1 cut(s) 584
EcoT14I CCWWGG 3 cut(s) 172, 273, 577
EcoT38I GRGCYC 1 cut(s) 272
ErhI CCWWGG 3 cut(s) 172, 273, 577
FaeI CATG 4 cut(s) 277, 356, 434, 700
FalI AAGNNNNNCTT 2 cut(s) 8, 40
FaqI GGGAC 1 cut(s) 139
FatI CATG 4 cut(s) 273, 352, 430, 696
FblI GTMKAC 1 cut(s) 456
FokI GGATG 3 cut(s) 189, 789, 936
FriOI GRGCYC 1 cut(s) 272
FspBI CTAG 2 cut(s) 173, 578
GsuI CTGGAG 1 cut(s) 164
HaeIII GGCC 2 cut(s) 215, 576
HgaI GACGC 1 cut(s) 879
Hin1I GRCGYC 1 cut(s) 890
Hin1II CATG 4 cut(s) 277, 356, 434, 700
HinfI GANTC 9 cut(s) 187, 294, 362, 427, 458, 671, 817, 851, 884
HphI GGTGA 1 cut(s) 723
Hpy166II GTNNAC 1 cut(s) 457
Hpy188I TCNGA 7 cut(s) 156, 208, 426, 516, 631, 670, 923
Hpy188III TCNNGA 7 cut(s) 80, 109, 229, 393, 437, 697, 881
Hpy8I GTNNAC 1 cut(s) 457
Hpy99I CGWCG 1 cut(s) 718
HpyCH4III ACNGT 2 cut(s) 705, 729
HpyCH4V TGCA 4 cut(s) 134, 288, 304, 834
HpyF10VI GCNNNNNNNGC 2 cut(s) 148, 777
HpyF3I CTNAG 5 cut(s) 6, 69, 191, 318, 828
Hsp92I GRCGYC 1 cut(s) 890
Hsp92II CATG 4 cut(s) 277, 356, 434, 700
Kzo9I GATC 5 cut(s) 279, 407, 417, 500, 598
LmnI GCTCC 1 cut(s) 275
LpnPI CCDG 7 cut(s) 60, 128, 305, 450, 635, 738, 752
LweI GCATC 3 cut(s) 160, 708, 767
MaeI CTAG 2 cut(s) 173, 578
MaeIII GTNAC 3 cut(s) 159, 179, 729
MalI GATC 5 cut(s) 281, 409, 419, 502, 600
MboI GATC 5 cut(s) 279, 407, 417, 500, 598
MflI RGATCY 2 cut(s) 279, 407
MhlI GDGCHC 2 cut(s) 99, 272
MluCI AATT 4 cut(s) 379, 541, 655, 934
MlyI GAGTC 5 cut(s) 288, 356, 452, 680, 893
MmeI TCCRAC 1 cut(s) 778
MnlI CCTC 6 cut(s) 64, 229, 628, 704, 744, 888
MroXI GAANNNNTTC 2 cut(s) 202, 659
MseI TTAA 2 cut(s) 603, 786
MslI CAYNNNNRTG 1 cut(s) 309
MspCI CTTAAG 1 cut(s) 602
MwoI GCNNNNNNNGC 2 cut(s) 148, 777
NcoI CCATGG 1 cut(s) 273
NdeII GATC 5 cut(s) 279, 407, 417, 500, 598
NlaIII CATG 4 cut(s) 277, 356, 434, 700
NmuCI GTSAC 1 cut(s) 729
NspV TTCGAA 1 cut(s) 903
PaeR7I CTCGAG 1 cut(s) 881
PagI TCATGA 1 cut(s) 696
PcsI WCGNNNNNNNCGW 1 cut(s) 893
PdmI GAANNNNTTC 2 cut(s) 202, 659
PfeI GAWTC 4 cut(s) 187, 427, 817, 851
PleI GAGTC 5 cut(s) 288, 356, 452, 679, 892
PpsI GAGTC 5 cut(s) 288, 356, 452, 679, 892
Psp124BI GAGCTC 1 cut(s) 272
PstNI CAGNNNCTG 1 cut(s) 674
PsuI RGATCY 2 cut(s) 279, 407
RseI CAYNNNNRTG 1 cut(s) 309
SacI GAGCTC 1 cut(s) 272
SaqAI TTAA 2 cut(s) 603, 786
Sau3AI GATC 5 cut(s) 279, 407, 417, 500, 598
SchI GAGTC 5 cut(s) 288, 356, 452, 680, 893
SduI GDGCHC 2 cut(s) 99, 272
SetI ASST 8 cut(s) 26, 60, 272, 404, 497, 567, 639, 736
SfaNI GCATC 3 cut(s) 160, 708, 767
SfcI CTRYAG 1 cut(s) 496
Sfr274I CTCGAG 1 cut(s) 881
SfuI TTCGAA 1 cut(s) 903
SlaI CTCGAG 1 cut(s) 881
SmiMI CAYNNNNRTG 1 cut(s) 309
SmlI CTYRAG 3 cut(s) 364, 602, 881
SmoI CTYRAG 3 cut(s) 364, 602, 881
Sse9I AATT 4 cut(s) 379, 541, 655, 934
SspMI CTAG 2 cut(s) 173, 578
SstI GAGCTC 1 cut(s) 272
StyI CCWWGG 3 cut(s) 172, 273, 577
TaaI ACNGT 2 cut(s) 705, 729
TaqI TCGA 4 cut(s) 196, 549, 882, 903
TaqII GACCGA 1 cut(s) 248
TasI AATT 4 cut(s) 379, 541, 655, 934
TfiI GAWTC 4 cut(s) 187, 427, 817, 851
Tru1I TTAA 2 cut(s) 603, 786
Tru9I TTAA 2 cut(s) 603, 786
TscAI CASTG 4 cut(s) 710, 732, 778, 841
TseFI GTSAC 1 cut(s) 729
Tsp45I GTSAC 1 cut(s) 729
TspDTI ATGAA 5 cut(s) 419, 499, 567, 713, 835
TspRI CASTG 4 cut(s) 710, 732, 778, 841
Vha464I CTTAAG 1 cut(s) 602
XapI RAATTY 3 cut(s) 541, 655, 934
XhoI CTCGAG 1 cut(s) 881
XmaJI CCTAGG 2 cut(s) 172, 577
XmiI GTMKAC 1 cut(s) 456
XmnI GAANNNNTTC 2 cut(s) 202, 659
XspI CTAG 2 cut(s) 173, 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.