MD03G1079300.v1.1

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000148
Physical Location & Seq
Reverse (-)
6395392 .. 6398754
3363 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1079300.v1.1.491

Sequence Viewer

Length: 1575 bp
ATGATCTTCCTTGTGTGCTTTCGTATATTTCATCCATTACTTCGGCTCGCCAATTCAACCCAGGAAGATTTTGCATGTTGGAAGGTTGAAAGAGTTTCTGAAGATAGCAAGCCGACTTTATACTTTCTTTCAATCATGGCTGAAAAAAAGGCTGTGTTGAATGAGGATCTTGAAAATGTTATTACCTTGAAGGCCTTGGTGGACACGGGAAGCAACAAAGTTATCTTCGTAGAGTCCGACGGTGATTTTATTGATGTTCTCTTCAGTTTCTTGACAATGCCCATGGGAAGAATTGTCACGCTTGCTGAGTGTTCAGTACCGGTGGAAATAGGTTGTATGAGAAATTTGTATCAGAGTATTATGAAATTTGATGTGCATAACTTCCGATCAAATGTTTGTAAAGTTATGTTGTTATTTCCCTGCAATTCTGCATATCTTCAATGCAAGAACCTCAAGTTGAAATTTGACAAAGATTGGCCAACACGGTACTTTAAGTGCTGTCAAAGATGCTTTTTTAGCTATTATAAAAGTGTCACCTGTCCTTCCTGTGGTTCTTCCATTTCTGGGGAGATTCCAGTGGATAATACTCAAGTTGGAGGCGCATTTGTGAAAGGGCGACCCAGGCTGATAATTACCGATGATTTACAGGTCATTTCCCCAGTAAGTGCAACAAGCATTTGTTTGTTTTCGAAGCTAGGGGTCACGGATTCTAAAACTACAGAGGAGTCGACTTTCAATATGGGAGTTCAGGAGGCTTTGAATTTGCTTATGCATTCGTTTGTATCAAAGACACCATTGACTGAAATTCTTCTGAAAAACGAACCAATACCAAGTTTGGGAGATGTACATTCCTGTCAAGGAATATCAATTGATTCTCAAATGGATGGTGACACAATCAATGAGGAAGAGAAAAACATTTCTCTTAAGCTTGTAGTTAGCAAGTCTAAGAAGATTGTTTGTTATGCAGAGGCACAAGAGGATTTTGTTAATCTACTCTGCAGTTTCTTGACTCTCCCACTTGGGTTTATATTAGAAAAGATGCGGAATGTTTCATGGAAAGGCTGTCTCAATCAGTTGTACAAGAGTGTCGAAGATCTTGAGGAGCAATACTTGAAGTCAAATTTCCACAAGGAATTGTTGGTCAATCCAAAGCTTGCACCTGGTTTTCGATACGAGAACACTCTGTTAGGGATTGAGGAGACCTCGTTTTATTATGTCGACGAGAAGTTAACTACTGATAAGTCCTGTATTCCTGATAATGCTTCAGCGGAGTCAGTTAAACTTAATGTTGTGGATCCCAAATCTCATGAAGATAGAGATAAAAGTGCTCAAGGATTTCTGAAAGGACCTGCTACCTTCACAGTGACTGACAATCTAGTTGTAAGACCGTTATCTCTAATCCTTGAAATGTCTGTTCTTCAAGAATTGAAGGTACCTTTCACCGACATCGAGGACCATATCGTGCATATGGGCAAGAGGGAGGCGTTGCTTCTTTTGGTGGCCTCGTTTATTGGTGATTCTGCTCTTACCAATACCTTCATTGGAAAGCTTAGGGAGCCAAAGCAAGAACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

525

Amino Acids

59.0

Weight (kDa)

5.42

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 58 - 492 4.2e-117 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 525
Acc36I ACCTGC 1 cut(s) 1357
Acc65I GGTACC 1 cut(s) 1432
AccB1I GGYRCC 1 cut(s) 1432
AccI GTMKAC 2 cut(s) 728, 1218
AciI CCGC 2 cut(s) 1042, 1268
AclWI GGATC 3 cut(s) 174, 1289, 1302
AcoI YGGCCR 1 cut(s) 476
AcsI RAATTY 6 cut(s) 343, 365, 461, 760, 804, 1120
AcuI CTGAAG 3 cut(s) 120, 247, 1248
AfaI GTAC 5 cut(s) 318, 488, 846, 1079, 1434
AfiI CCNNNNNNNGG 3 cut(s) 548, 564, 836
AflII CTTAAG 1 cut(s) 923
AgeI ACCGGT 1 cut(s) 319
AjnI CCWGG 3 cut(s) 60, 620, 1159
AluBI AGCT 5 cut(s) 519, 694, 928, 1153, 1549
AluI AGCT 5 cut(s) 519, 694, 928, 1153, 1549
Alw21I GWGCWC 1 cut(s) 1330
Alw26I GTCTC 2 cut(s) 1070, 1193
AlwI GGATC 3 cut(s) 174, 1289, 1302
AlwNI CAGNNNCTG 1 cut(s) 1367
AoxI GGCC 3 cut(s) 192, 476, 1500
ApoI RAATTY 6 cut(s) 343, 365, 461, 760, 804, 1120
AsiGI ACCGGT 1 cut(s) 319
Asp700I GAANNNNTTC 1 cut(s) 807
Asp718I GGTACC 1 cut(s) 1432
AspLEI GCGC 1 cut(s) 602
AspS9I GGNCC 2 cut(s) 1346, 1453
AsuHPI GGTGA 5 cut(s) 254, 526, 899, 1432, 1526
AsuII TTCGAA 1 cut(s) 689
AvaII GGWCC 2 cut(s) 1346, 1453
BalI TGGCCA 1 cut(s) 478
BamHI GGATCC 1 cut(s) 1294
BanI GGYRCC 1 cut(s) 1432
Bbv12I GWGCWC 1 cut(s) 1330
BccI CCATC 1 cut(s) 878
BciT130I CCWGG 3 cut(s) 62, 622, 1161
BcoDI GTCTC 2 cut(s) 1070, 1193
BfaI CTAG 2 cut(s) 695, 1376
BfmI CTRYAG 2 cut(s) 717, 997
BfrI CTTAAG 1 cut(s) 923
BfuAI ACCTGC 1 cut(s) 1357
BglII AGATCT 1 cut(s) 1093
Bme1390I CCNGG 3 cut(s) 62, 622, 1161
Bme18I GGWCC 2 cut(s) 1346, 1453
BmgT120I GGNCC 2 cut(s) 1346, 1453
BmiI GGNNCC 3 cut(s) 1296, 1434, 1557
BmrFI CCNGG 3 cut(s) 62, 622, 1161
BmrI ACTGGG 1 cut(s) 653
BmsI GCATC 2 cut(s) 497, 1029
BmuI ACTGGG 1 cut(s) 653
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
Bpu10I CCTNAGC 1 cut(s) 1550
Bpu14I TTCGAA 1 cut(s) 689
BpuEI CTTGAG 4 cut(s) 437, 573, 1118, 1314
BsaI GGTCTC 1 cut(s) 1193
BsaJI CCNNGG 4 cut(s) 60, 195, 282, 620
BsaWI WCCGGW 1 cut(s) 319
BsaXI ACNNNNNCTCC 2 cut(s) 1190, 1220
Bsc4I CCNNNNNNNGG 3 cut(s) 548, 564, 836
Bse118I RCCGGY 1 cut(s) 319
Bse1I ACTGG 2 cut(s) 575, 659
BseBI CCWGG 3 cut(s) 62, 622, 1161
BseDI CCNNGG 4 cut(s) 60, 195, 282, 620
BseGI GGATG 2 cut(s) 31, 889
BseLI CCNNNNNNNGG 3 cut(s) 548, 564, 836
BseMII CTCAG 1 cut(s) 297
BseNI ACTGG 2 cut(s) 575, 659
BseRI GAGGAG 3 cut(s) 737, 1115, 1211
BshFI GGCC 3 cut(s) 194, 478, 1502
BshNI GGYRCC 1 cut(s) 1432
BshTI ACCGGT 1 cut(s) 319
BsiHKAI GWGCWC 1 cut(s) 1330
BsiSI CCGG 1 cut(s) 320
BslI CCNNNNNNNGG 3 cut(s) 548, 564, 836
BsmAI GTCTC 2 cut(s) 1070, 1193
BsmI GAATGC 1 cut(s) 772
BsnI GGCC 3 cut(s) 194, 478, 1502
Bso31I GGTCTC 1 cut(s) 1193
Bsp119I TTCGAA 1 cut(s) 689
Bsp1286I GDGCHC 1 cut(s) 1330
Bsp1407I TGTACA 2 cut(s) 844, 1077
Bsp143I GATC 5 cut(s) 3, 166, 386, 1093, 1294
Bsp19I CCATGG 1 cut(s) 282
BspACI CCGC 2 cut(s) 1042, 1268
BspANI GGCC 3 cut(s) 194, 478, 1502
BspCNI CTCAG 1 cut(s) 298
BspHI TCATGA 1 cut(s) 1306
BspLI GGNNCC 3 cut(s) 1296, 1434, 1557
BspMAI CTGCAG 1 cut(s) 1001
BspMI ACCTGC 1 cut(s) 1357
BspPI GGATC 3 cut(s) 174, 1289, 1302
BspT104I TTCGAA 1 cut(s) 689
BspT107I GGYRCC 1 cut(s) 1432
BspTI CTTAAG 1 cut(s) 923
BspTNI GGTCTC 1 cut(s) 1193
BsrFI RCCGGY 1 cut(s) 319
BsrGI TGTACA 2 cut(s) 844, 1077
BsrI ACTGG 2 cut(s) 575, 659
BssAI RCCGGY 1 cut(s) 319
BssECI CCNNGG 4 cut(s) 60, 195, 282, 620
BssMI GATC 5 cut(s) 3, 166, 386, 1093, 1294
BssT1I CCWWGG 2 cut(s) 195, 282
Bst2UI CCWGG 3 cut(s) 62, 622, 1161
Bst4CI ACNGT 4 cut(s) 242, 486, 1363, 1389
Bst6I CTCTTC 2 cut(s) 266, 900
BstAFI CTTAAG 1 cut(s) 923
BstAUI TGTACA 2 cut(s) 844, 1077
BstBI TTCGAA 1 cut(s) 689
BstC8I GCNNGC 4 cut(s) 48, 110, 303, 1155
BstDEI CTNAG 3 cut(s) 306, 945, 1550
BstDSI CCRYGG 1 cut(s) 282
BstF5I GGATG 2 cut(s) 31, 889
BstHHI GCGC 1 cut(s) 602
BstKTI GATC 5 cut(s) 6, 169, 389, 1096, 1297
BstMAI GTCTC 2 cut(s) 1070, 1193
BstMBI GATC 5 cut(s) 3, 166, 386, 1093, 1294
BstMWI GCNNNNNNNGC 3 cut(s) 516, 622, 1555
BstNI CCWGG 3 cut(s) 62, 622, 1161
BstNSI RCATGY 1 cut(s) 78
BstSCI CCNGG 3 cut(s) 60, 620, 1159
BstSFI CTRYAG 2 cut(s) 717, 997
BstX2I RGATCY 3 cut(s) 166, 1093, 1294
BstYI RGATCY 3 cut(s) 166, 1093, 1294
BsuRI GGCC 3 cut(s) 194, 478, 1502
BtgI CCRYGG 1 cut(s) 282
BtsCI GGATG 2 cut(s) 31, 889
BtsIMutI CAGTG 2 cut(s) 582, 1368
BveI ACCTGC 1 cut(s) 1357
Cac8I GCNNGC 4 cut(s) 48, 110, 303, 1155
CaiI CAGNNNCTG 1 cut(s) 1367
CciI TCATGA 1 cut(s) 1306
CfoI GCGC 1 cut(s) 602
Cfr10I RCCGGY 1 cut(s) 319
Cfr13I GGNCC 2 cut(s) 1346, 1453
CsiI ACCWGGT 1 cut(s) 1159
Csp6I GTAC 5 cut(s) 317, 487, 845, 1078, 1433
CspAI ACCGGT 1 cut(s) 319
CviAII CATG 5 cut(s) 75, 136, 283, 1053, 1307
CviQI GTAC 5 cut(s) 317, 487, 845, 1078, 1433
DdeI CTNAG 3 cut(s) 306, 945, 1550
DpnI GATC 5 cut(s) 5, 168, 388, 1095, 1296
DpnII GATC 5 cut(s) 3, 166, 386, 1093, 1294
EaeI YGGCCR 1 cut(s) 476
Eam1104I CTCTTC 2 cut(s) 266, 900
EarI CTCTTC 2 cut(s) 266, 900
Eco130I CCWWGG 2 cut(s) 195, 282
Eco147I AGGCCT 1 cut(s) 194
Eco31I GGTCTC 1 cut(s) 1193
Eco47I GGWCC 2 cut(s) 1346, 1453
Eco57I CTGAAG 3 cut(s) 120, 247, 1248
EcoO109I RGGNCCY 1 cut(s) 1346
EcoRII CCWGG 3 cut(s) 60, 620, 1159
EcoT14I CCWWGG 2 cut(s) 195, 282
EcoT22I ATGCAT 1 cut(s) 774
ErhI CCWWGG 2 cut(s) 195, 282
FaeI CATG 5 cut(s) 78, 139, 286, 1056, 1310
FatI CATG 5 cut(s) 74, 135, 282, 1052, 1306
FauNDI CATATG 1 cut(s) 1467
FblI GTMKAC 2 cut(s) 728, 1218
FokI GGATG 2 cut(s) 18, 896
FspBI CTAG 2 cut(s) 695, 1376
GlaI GCGC 1 cut(s) 601
HaeIII GGCC 3 cut(s) 194, 478, 1502
HapII CCGG 1 cut(s) 320
HhaI GCGC 1 cut(s) 602
Hin1II CATG 5 cut(s) 78, 139, 286, 1056, 1310
Hin6I GCGC 1 cut(s) 600
HinP1I GCGC 1 cut(s) 600
HincII GTYRAC 3 cut(s) 729, 1219, 1230
HindII GTYRAC 3 cut(s) 729, 1219, 1230
HindIII AAGCTT 3 cut(s) 926, 1151, 1547
HinfI GANTC 8 cut(s) 233, 571, 707, 725, 872, 1009, 1271, 1517
HpaI GTTAAC 1 cut(s) 1230
HpaII CCGG 1 cut(s) 320
HphI GGTGA 5 cut(s) 254, 526, 899, 1432, 1526
Hpy166II GTNNAC 4 cut(s) 202, 729, 1219, 1230
Hpy188I TCNGA 6 cut(s) 100, 238, 354, 386, 813, 1341
Hpy188III TCNNGA 8 cut(s) 170, 271, 749, 1006, 1097, 1253, 1307, 1421
Hpy8I GTNNAC 4 cut(s) 202, 729, 1219, 1230
Hpy99I CGWCG 2 cut(s) 242, 1223
HpyAV CCTTC 6 cut(s) 76, 184, 552, 1366, 1423, 1546
HpyCH4III ACNGT 4 cut(s) 242, 486, 1363, 1389
HpyF10VI GCNNNNNNNGC 3 cut(s) 516, 622, 1555
HpyF3I CTNAG 3 cut(s) 306, 945, 1550
Hsp92II CATG 5 cut(s) 78, 139, 286, 1056, 1310
HspAI GCGC 1 cut(s) 600
KpnI GGTACC 1 cut(s) 1436
KspAI GTTAAC 1 cut(s) 1230
Kzo9I GATC 5 cut(s) 3, 166, 386, 1093, 1294
LmnI GCTCC 2 cut(s) 1102, 1555
LweI GCATC 2 cut(s) 497, 1029
MabI ACCWGGT 1 cut(s) 1159
MaeI CTAG 2 cut(s) 695, 1376
MaeIII GTNAC 5 cut(s) 295, 532, 700, 887, 1363
MalI GATC 5 cut(s) 5, 168, 388, 1095, 1296
MboI GATC 5 cut(s) 3, 166, 386, 1093, 1294
MfeI CAATTG 1 cut(s) 867
MflI RGATCY 3 cut(s) 166, 1093, 1294
MhlI GDGCHC 1 cut(s) 1330
MlsI TGGCCA 1 cut(s) 478
MluNI TGGCCA 1 cut(s) 478
MlyI GAGTC 4 cut(s) 242, 734, 1003, 1280
MmeI TCCRAC 3 cut(s) 59, 261, 574
Mox20I TGGCCA 1 cut(s) 478
Mph1103I ATGCAT 1 cut(s) 774
MroXI GAANNNNTTC 1 cut(s) 807
MscI TGGCCA 1 cut(s) 478
MseI TTAA 6 cut(s) 492, 924, 987, 1229, 1278, 1284
Msp20I TGGCCA 1 cut(s) 478
MspA1I CMGCKG 1 cut(s) 1268
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 1 cut(s) 320
MspR9I CCNGG 3 cut(s) 62, 622, 1161
MunI CAATTG 1 cut(s) 867
Mva1269I GAATGC 1 cut(s) 772
MvaI CCWGG 3 cut(s) 62, 622, 1161
MwoI GCNNNNNNNGC 3 cut(s) 516, 622, 1555
NcoI CCATGG 1 cut(s) 282
NdeI CATATG 1 cut(s) 1467
NdeII GATC 5 cut(s) 3, 166, 386, 1093, 1294
NlaIII CATG 5 cut(s) 78, 139, 286, 1056, 1310
NlaIV GGNNCC 3 cut(s) 1296, 1434, 1557
NmuCI GTSAC 5 cut(s) 295, 532, 700, 887, 1363
NsiI ATGCAT 1 cut(s) 774
NspI RCATGY 1 cut(s) 78
NspV TTCGAA 1 cut(s) 689
PagI TCATGA 1 cut(s) 1306
PceI AGGCCT 1 cut(s) 194
PcsI WCGNNNNNNNCGW 1 cut(s) 234
PctI GAATGC 1 cut(s) 772
PdmI GAANNNNTTC 1 cut(s) 807
PfeI GAWTC 4 cut(s) 571, 707, 872, 1517
PinAI ACCGGT 1 cut(s) 319
PleI GAGTC 4 cut(s) 241, 733, 1003, 1279
PpsI GAGTC 4 cut(s) 241, 733, 1003, 1279
PpuMI RGGWCCY 1 cut(s) 1346
PsiI TTATAA 1 cut(s) 525
Psp5II RGGWCCY 1 cut(s) 1346
Psp6I CCWGG 3 cut(s) 60, 620, 1159
PspGI CCWGG 3 cut(s) 60, 620, 1159
PspN4I GGNNCC 3 cut(s) 1296, 1434, 1557
PspPI GGNCC 2 cut(s) 1346, 1453
PspPPI RGGWCCY 1 cut(s) 1346
PstI CTGCAG 1 cut(s) 1001
PstNI CAGNNNCTG 1 cut(s) 1367
PsuI RGATCY 3 cut(s) 166, 1093, 1294
RsaI GTAC 5 cut(s) 318, 488, 846, 1079, 1434
RsaNI GTAC 5 cut(s) 317, 487, 845, 1078, 1433
SalI GTCGAC 2 cut(s) 727, 1217
SaqAI TTAA 6 cut(s) 492, 924, 987, 1229, 1278, 1284
Sau3AI GATC 5 cut(s) 3, 166, 386, 1093, 1294
Sau96I GGNCC 2 cut(s) 1346, 1453
SchI GAGTC 4 cut(s) 242, 734, 1003, 1280
ScrFI CCNGG 3 cut(s) 62, 622, 1161
SduI GDGCHC 1 cut(s) 1330
SexAI ACCWGGT 1 cut(s) 1159
SfaNI GCATC 2 cut(s) 497, 1029
SfcI CTRYAG 2 cut(s) 717, 997
SfuI TTCGAA 1 cut(s) 689
SinI GGWCC 2 cut(s) 1346, 1453
SmlI CTYRAG 5 cut(s) 452, 588, 923, 1097, 1329
SmoI CTYRAG 5 cut(s) 452, 588, 923, 1097, 1329
SseBI AGGCCT 1 cut(s) 194
SsiI CCGC 2 cut(s) 1042, 1268
SspMI CTAG 2 cut(s) 695, 1376
StuI AGGCCT 1 cut(s) 194
StyD4I CCNGG 3 cut(s) 60, 620, 1159
StyI CCWWGG 2 cut(s) 195, 282
TaaI ACNGT 4 cut(s) 242, 486, 1363, 1389
TaqI TCGA 6 cut(s) 689, 728, 1089, 1168, 1218, 1449
TatI WGTACW 2 cut(s) 844, 1077
TfiI GAWTC 4 cut(s) 571, 707, 872, 1517
Tru1I TTAA 6 cut(s) 492, 924, 987, 1229, 1278, 1284
Tru9I TTAA 6 cut(s) 492, 924, 987, 1229, 1278, 1284
TscAI CASTG 2 cut(s) 582, 1368
TseFI GTSAC 5 cut(s) 295, 532, 700, 887, 1363
Tsp45I GTSAC 5 cut(s) 295, 532, 700, 887, 1363
TspDTI ATGAA 5 cut(s) 20, 377, 1041, 1323, 1528
TspGWI ACGGA 1 cut(s) 719
TspRI CASTG 2 cut(s) 582, 1368
Vha464I CTTAAG 1 cut(s) 923
VpaK11BI GGWCC 2 cut(s) 1346, 1453
XapI RAATTY 6 cut(s) 343, 365, 461, 760, 804, 1120
XceI RCATGY 1 cut(s) 78
XmiI GTMKAC 2 cut(s) 728, 1218
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 2 cut(s) 695, 1376
Zsp2I ATGCAT 1 cut(s) 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.