Rroxscaffold_1G00013610

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000148
Physical Location & Seq
Reverse (-)
16731235 .. 16735064
3830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00013610.1

Sequence Viewer

Length: 1491 bp
ATGGCCAATATATCTGTCAACAGCATTAACTTGAAAGCCATGGTGGACAAAGCGAGCAACCAAATTATCTTCGTGGAGTCTGACAATGATTTCATTGATGTTATCTTTAGTTTCTTAACAGTACCCATGGGGAAAATTATCAGGGTGGCCCCTAATCAATCAATACGATTGGGCGTAGGTTGCTTGAATAATGTGTATGCAAGTGTTAAGAATATGGATGTGAAGCATTTCTGCACTGAAGCATGTAAAGACATGTTGCTATCTCCCCGGAGTGTGGCTGACTCTCAATGCCAGAACCTCAAAGTGAAGATTTACAATGATGAGGCTACACAGTACTTTATGTGCTCACATAACAGAGTTGATTGCAAGTTTAGTTATTGCAAATATTTAAATTGTGATAGTTGTGGAGGAAGCATAAATAAGGAGAGAAATCTCCTAGTGACTCCAGATGGAGGTGTGTTTGTGAAAGGACTATCCAGACTCATAATTACTGATGACTTACAAGTGATTCCACCATTAACTGCAGCAAGCATTCCTCTACTTACAAAGCTTGGAGTCATGGATGGGAATACTATCGAGGAGGTGACTATCAATGTAGGAGTTGATGAGGTTTTGAATTTGCTTATGCGGTCATTAGCATCCAAGACACCTTTGACAGAATCTCTGCTGAAGAATAAACCAAGACGAAAATTTTGCAATGAAAATCAAGGAATAAATACCGAACCCCAAATGGTAAAAGACAAAACGAATCTGGAAGGAACCATTTCTGTCAAGCTCATAGTGAGCAAATCAAAGAAGATGGTTTGTTACGCAGAAGCAGGGGAGGATTTTGTTAATTTGCTTTTAAGTTTCTTAACTATTCCGCTGGGTTTTATTGTTAAGCACATGGGGAATTGCTCATTACAAGGATGCATTGATCAGTTGTACAAGAGTGTCAAGGATCTTGATGATCAATATATGATGTCAAGCCACCACAAAGAAATGCTACTCACTCCTAAACTTGTCCCTGGTTTTTGCTATGAGAACCATCTTTTAGGAACTGAGGAAGCCACATATTATTATGCTGGTTCAACAGGTTTTCTGTCTACTGATAGAGTCCTTCTTGCTACTCAAACTGCGCTTGCTACTAAGTCTATCAGGTCATACTGCGGTCAAGAGAGTGCTCAAACTTCAATAAGGCCAATTGCTTTTAGGGATCCCAAAGCCAATCATCACCAACATAAAAATGCTCAAGTTCAAGGGTTTTTAGAAGGACCGGCAATGTTCACAGTGACTGATGATCTGAACATAAGACCTGTATCTCTAATCTTTGGCCTGTCTCTTCTAAATGAGTTGAAGGTACCTTTGACTGACATTTATGTGCAAACTGTGCAGGTGCACGAAGAGGAGGCGTTGCGTCTTTTGGTAGCTGCTTTTCTTGGTGACTCTGCTCTAACCAGGACCTTCATCAGGGAGACAGAGCAAAACAAAAGGATAAAGCAAGAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

496

Amino Acids

55.25

Weight (kDa)

6.79

Isoelectric Point (pI)

35.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 8 - 461 3.4e-125 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1363
Acc36I ACCTGC 1 cut(s) 1363
Acc65I GGTACC 1 cut(s) 1339
AccB1I GGYRCC 1 cut(s) 1339
AccI GTMKAC 1 cut(s) 1085
AciI CCGC 3 cut(s) 628, 863, 1149
AclWI GGATC 3 cut(s) 948, 1190, 1203
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 616, 689
AcuI CTGAAG 2 cut(s) 258, 689
AfaI GTAC 4 cut(s) 123, 335, 926, 1341
AfiI CCNNNNNNNGG 3 cut(s) 274, 452, 1449
AflIII ACRYGT 1 cut(s) 252
AgsI TTSAA 7 cut(s) 34, 187, 616, 1071, 1173, 1238, 1336
AjnI CCWGG 2 cut(s) 1006, 1436
AluBI AGCT 3 cut(s) 550, 775, 1409
AluI AGCT 3 cut(s) 550, 775, 1409
Alw21I GWGCWC 3 cut(s) 347, 1165, 1380
Alw26I GTCTC 2 cut(s) 1323, 1448
Alw44I GTGCAC 1 cut(s) 1376
AlwI GGATC 3 cut(s) 948, 1190, 1203
AlwNI CAGNNNCTG 1 cut(s) 1274
AoxI GGCC 4 cut(s) 3, 147, 1178, 1312
ApaLI GTGCAC 1 cut(s) 1376
ApeKI GCWGC 2 cut(s) 524, 1409
ApoI RAATTY 2 cut(s) 616, 689
ArsI GACNNNNNNTTYG 2 cut(s) 675, 707
Asp700I GAANNNNTTC 2 cut(s) 227, 763
Asp718I GGTACC 1 cut(s) 1339
AspLEI GCGC 1 cut(s) 1120
AspS9I GGNCC 3 cut(s) 148, 1253, 1440
AsuC2I CCSGG 1 cut(s) 268
AsuHPI GGTGA 3 cut(s) 595, 1205, 1433
AvaII GGWCC 2 cut(s) 1253, 1440
BaeGI GKGCMC 1 cut(s) 1380
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1195
BanI GGYRCC 1 cut(s) 1339
Bbv12I GWGCWC 3 cut(s) 347, 1165, 1380
BbvI GCAGC 2 cut(s) 536, 1396
BccI CCATC 4 cut(s) 443, 557, 793, 1035
BcgI CGANNNNNNTGC 2 cut(s) 675, 709
BciT130I CCWGG 2 cut(s) 1008, 1438
BclI TGATCA 2 cut(s) 916, 949
BcnI CCSGG 1 cut(s) 268
BcoDI GTCTC 2 cut(s) 1323, 1448
BfaI CTAG 1 cut(s) 437
BfmI CTRYAG 1 cut(s) 522
BfuAI ACCTGC 1 cut(s) 1363
BisI GCNGC 2 cut(s) 525, 1410
BlsI GCNGC 2 cut(s) 526, 1411
BmcAI AGTACT 1 cut(s) 335
Bme1390I CCNGG 3 cut(s) 268, 1008, 1438
Bme18I GGWCC 2 cut(s) 1253, 1440
BmgT120I GGNCC 3 cut(s) 148, 1253, 1440
BmiI GGNNCC 4 cut(s) 150, 760, 1197, 1341
BmrFI CCNGG 3 cut(s) 268, 1008, 1438
BmsI GCATC 2 cut(s) 647, 899
BpmI CTGGAG 1 cut(s) 429
BpuEI CTTGAG 1 cut(s) 1215
BpuMI CCSGG 1 cut(s) 268
BsaJI CCNNGG 4 cut(s) 39, 126, 266, 1006
Bsc4I CCNNNNNNNGG 3 cut(s) 274, 452, 1449
Bse118I RCCGGY 1 cut(s) 1255
Bse3DI GCAATG 2 cut(s) 703, 1266
BseBI CCWGG 2 cut(s) 1008, 1438
BseDI CCNNGG 4 cut(s) 39, 126, 266, 1006
BseGI GGATG 4 cut(s) 223, 568, 638, 914
BseLI CCNNNNNNNGG 3 cut(s) 274, 452, 1449
BseMI GCAATG 2 cut(s) 703, 1266
BseMII CTCAG 1 cut(s) 1032
BseRI GAGGAG 2 cut(s) 593, 1400
BseSI GKGCMC 1 cut(s) 1380
BseXI GCAGC 2 cut(s) 536, 1396
BseYI CCCAGC 1 cut(s) 865
BsgI GTGCAG 2 cut(s) 217, 1391
BshFI GGCC 4 cut(s) 5, 149, 1180, 1314
BshNI GGYRCC 1 cut(s) 1339
BsiHKAI GWGCWC 3 cut(s) 347, 1165, 1380
BsiSI CCGG 2 cut(s) 268, 1256
BslFI GGGAC 1 cut(s) 989
BslI CCNNNNNNNGG 3 cut(s) 274, 452, 1449
BsmAI GTCTC 2 cut(s) 1323, 1448
BsmFI GGGAC 1 cut(s) 989
BsmI GAATGC 1 cut(s) 531
BsnI GGCC 4 cut(s) 5, 149, 1180, 1314
Bsp1286I GDGCHC 3 cut(s) 347, 1165, 1380
Bsp1407I TGTACA 1 cut(s) 924
Bsp143I GATC 5 cut(s) 916, 940, 949, 1195, 1279
Bsp19I CCATGG 2 cut(s) 39, 126
BspACI CCGC 3 cut(s) 628, 863, 1149
BspANI GGCC 4 cut(s) 5, 149, 1180, 1314
BspCNI CTCAG 1 cut(s) 1033
BspLI GGNNCC 4 cut(s) 150, 760, 1197, 1341
BspMAI CTGCAG 1 cut(s) 526
BspMI ACCTGC 1 cut(s) 1363
BspPI GGATC 3 cut(s) 948, 1190, 1203
BspT107I GGYRCC 1 cut(s) 1339
BsrDI GCAATG 2 cut(s) 703, 1266
BsrFI RCCGGY 1 cut(s) 1255
BsrGI TGTACA 1 cut(s) 924
BssAI RCCGGY 1 cut(s) 1255
BssECI CCNNGG 4 cut(s) 39, 126, 266, 1006
BssMI GATC 5 cut(s) 916, 940, 949, 1195, 1279
BssT1I CCWWGG 2 cut(s) 39, 126
Bst2UI CCWGG 2 cut(s) 1008, 1438
Bst4CI ACNGT 5 cut(s) 121, 333, 1270, 1369, 1488
Bst6I CTCTTC 2 cut(s) 1326, 1377
BstAPI GCANNNNNTGC 1 cut(s) 1369
BstAUI TGTACA 1 cut(s) 924
BstC8I GCNNGC 3 cut(s) 55, 529, 1122
BstDEI CTNAG 2 cut(s) 1041, 1128
BstDSI CCRYGG 2 cut(s) 39, 126
BstENI CCTNNNNNAGG 1 cut(s) 1447
BstF5I GGATG 4 cut(s) 223, 568, 638, 914
BstHHI GCGC 1 cut(s) 1120
BstKTI GATC 5 cut(s) 919, 943, 952, 1198, 1282
BstMAI GTCTC 2 cut(s) 1323, 1448
BstMBI GATC 5 cut(s) 916, 940, 949, 1195, 1279
BstMWI GCNNNNNNNGC 2 cut(s) 180, 1369
BstNI CCWGG 2 cut(s) 1008, 1438
BstNSI RCATGY 2 cut(s) 246, 256
BstSCI CCNGG 3 cut(s) 266, 1006, 1436
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 1 cut(s) 1380
BstV1I GCAGC 2 cut(s) 536, 1396
BstX2I RGATCY 2 cut(s) 940, 1195
BstYI RGATCY 2 cut(s) 940, 1195
BsuRI GGCC 4 cut(s) 5, 149, 1180, 1314
BtgI CCRYGG 2 cut(s) 39, 126
BtsCI GGATG 4 cut(s) 223, 568, 638, 914
BtsIMutI CAGTG 2 cut(s) 234, 1275
BveI ACCTGC 1 cut(s) 1363
Cac8I GCNNGC 3 cut(s) 55, 529, 1122
CaiI CAGNNNCTG 1 cut(s) 1274
CfoI GCGC 1 cut(s) 1120
Cfr10I RCCGGY 1 cut(s) 1255
Cfr13I GGNCC 3 cut(s) 148, 1253, 1440
CseI GACGC 1 cut(s) 1385
Csp6I GTAC 4 cut(s) 122, 334, 925, 1340
CviAII CATG 6 cut(s) 40, 127, 243, 253, 559, 886
CviQI GTAC 4 cut(s) 122, 334, 925, 1340
DdeI CTNAG 2 cut(s) 1041, 1128
DpnI GATC 5 cut(s) 918, 942, 951, 1197, 1281
DpnII GATC 5 cut(s) 916, 940, 949, 1195, 1279
DraI TTTAAA 1 cut(s) 390
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 1326, 1377
EarI CTCTTC 2 cut(s) 1326, 1377
Eco130I CCWWGG 2 cut(s) 39, 126
Eco47I GGWCC 2 cut(s) 1253, 1440
Eco57I CTGAAG 2 cut(s) 258, 689
EcoNI CCTNNNNNAGG 1 cut(s) 1447
EcoO109I RGGNCCY 1 cut(s) 1440
EcoRII CCWGG 2 cut(s) 1006, 1436
EcoT14I CCWWGG 2 cut(s) 39, 126
EcoT22I ATGCAT 1 cut(s) 914
ErhI CCWWGG 2 cut(s) 39, 126
FaeI CATG 6 cut(s) 43, 130, 246, 256, 562, 889
FaqI GGGAC 1 cut(s) 989
FatI CATG 6 cut(s) 39, 126, 242, 252, 558, 885
FbaI TGATCA 2 cut(s) 916, 949
FblI GTMKAC 1 cut(s) 1085
Fnu4HI GCNGC 2 cut(s) 525, 1410
FokI GGATG 4 cut(s) 230, 575, 625, 921
Fsp4HI GCNGC 2 cut(s) 525, 1410
FspBI CTAG 1 cut(s) 437
GlaI GCGC 1 cut(s) 1119
GluI GCNGC 2 cut(s) 525, 1410
GsaI CCCAGC 1 cut(s) 869
GsuI CTGGAG 1 cut(s) 429
HaeIII GGCC 4 cut(s) 5, 149, 1180, 1314
HapII CCGG 2 cut(s) 268, 1256
HgaI GACGC 1 cut(s) 1385
HhaI GCGC 1 cut(s) 1120
Hin1II CATG 6 cut(s) 43, 130, 246, 256, 562, 889
Hin6I GCGC 1 cut(s) 1118
HinP1I GCGC 1 cut(s) 1118
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 548
HpaII CCGG 2 cut(s) 268, 1256
HphI GGTGA 3 cut(s) 595, 1205, 1433
Hpy166II GTNNAC 5 cut(s) 19, 46, 1086, 1266, 1378
Hpy188I TCNGA 2 cut(s) 82, 1284
Hpy188III TCNNGA 5 cut(s) 446, 477, 752, 944, 1154
Hpy8I GTNNAC 5 cut(s) 19, 46, 1086, 1266, 1378
HpyAV CCTTC 5 cut(s) 749, 1109, 1244, 1330, 1453
HpyCH4III ACNGT 5 cut(s) 121, 333, 1270, 1369, 1488
HpyF10VI GCNNNNNNNGC 2 cut(s) 180, 1369
HpyF3I CTNAG 2 cut(s) 1041, 1128
Hsp92II CATG 6 cut(s) 43, 130, 246, 256, 562, 889
HspAI GCGC 1 cut(s) 1118
KpnI GGTACC 1 cut(s) 1343
Ksp22I TGATCA 2 cut(s) 916, 949
Kzo9I GATC 5 cut(s) 916, 940, 949, 1195, 1279
Lsp1109I GCAGC 2 cut(s) 536, 1396
LweI GCATC 2 cut(s) 647, 899
MaeI CTAG 1 cut(s) 437
MaeIII GTNAC 5 cut(s) 439, 583, 806, 1270, 1421
MalI GATC 5 cut(s) 918, 942, 951, 1197, 1281
MboI GATC 5 cut(s) 916, 940, 949, 1195, 1279
MboII GAAGA 6 cut(s) 61, 319, 682, 808, 1313, 1394
MfeI CAATTG 1 cut(s) 1182
MflI RGATCY 2 cut(s) 940, 1195
MhlI GDGCHC 3 cut(s) 347, 1165, 1380
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 63, 135, 391, 486, 616, 689, 835, 892, 1182
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 7 cut(s) 86, 275, 436, 474, 564, 1104, 1418
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 914
MroXI GAANNNNTTC 2 cut(s) 227, 763
MscI TGGCCA 1 cut(s) 5
MseI TTAA 9 cut(s) 27, 116, 207, 389, 518, 834, 845, 854, 879
MslI CAYNNNNRTG 2 cut(s) 1224, 1358
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 865
MspI CCGG 2 cut(s) 268, 1256
MspR9I CCNGG 3 cut(s) 268, 1008, 1438
MunI CAATTG 1 cut(s) 1182
Mva1269I GAATGC 1 cut(s) 531
MvaI CCWGG 2 cut(s) 1008, 1438
MwoI GCNNNNNNNGC 2 cut(s) 180, 1369
NciI CCSGG 1 cut(s) 268
NcoI CCATGG 2 cut(s) 39, 126
NdeII GATC 5 cut(s) 916, 940, 949, 1195, 1279
NlaIII CATG 6 cut(s) 43, 130, 246, 256, 562, 889
NlaIV GGNNCC 4 cut(s) 150, 760, 1197, 1341
NmuCI GTSAC 4 cut(s) 439, 583, 1270, 1421
NsiI ATGCAT 1 cut(s) 914
NspI RCATGY 2 cut(s) 246, 256
PaqCI CACCTGC 1 cut(s) 1363
PciI ACATGT 1 cut(s) 252
PctI GAATGC 1 cut(s) 531
PdmI GAANNNNTTC 2 cut(s) 227, 763
PfeI GAWTC 3 cut(s) 508, 659, 748
PkrI GCNGC 2 cut(s) 526, 1411
PleI GAGTC 7 cut(s) 85, 275, 436, 474, 563, 1103, 1418
PpsI GAGTC 7 cut(s) 85, 275, 436, 474, 563, 1103, 1418
PpuMI RGGWCCY 1 cut(s) 1440
PscI ACATGT 1 cut(s) 252
Psp5II RGGWCCY 1 cut(s) 1440
Psp6I CCWGG 2 cut(s) 1006, 1436
PspFI CCCAGC 1 cut(s) 865
PspGI CCWGG 2 cut(s) 1006, 1436
PspN4I GGNNCC 4 cut(s) 150, 760, 1197, 1341
PspPI GGNCC 3 cut(s) 148, 1253, 1440
PspPPI RGGWCCY 1 cut(s) 1440
PstI CTGCAG 1 cut(s) 526
PstNI CAGNNNCTG 1 cut(s) 1274
PsuI RGATCY 2 cut(s) 940, 1195
RsaI GTAC 4 cut(s) 123, 335, 926, 1341
RsaNI GTAC 4 cut(s) 122, 334, 925, 1340
RseI CAYNNNNRTG 2 cut(s) 1224, 1358
SaqAI TTAA 9 cut(s) 27, 116, 207, 389, 518, 834, 845, 854, 879
SatI GCNGC 2 cut(s) 525, 1410
Sau3AI GATC 5 cut(s) 916, 940, 949, 1195, 1279
Sau96I GGNCC 3 cut(s) 148, 1253, 1440
ScaI AGTACT 1 cut(s) 335
SchI GAGTC 7 cut(s) 86, 275, 436, 474, 564, 1104, 1418
ScrFI CCNGG 3 cut(s) 268, 1008, 1438
SduI GDGCHC 3 cut(s) 347, 1165, 1380
SfaNI GCATC 2 cut(s) 647, 899
SfcI CTRYAG 1 cut(s) 522
SinI GGWCC 2 cut(s) 1253, 1440
SmiI ATTTAAAT 1 cut(s) 390
SmiMI CAYNNNNRTG 2 cut(s) 1224, 1358
SmlI CTYRAG 1 cut(s) 1230
SmoI CTYRAG 1 cut(s) 1230
Sse9I AATT 9 cut(s) 63, 135, 391, 486, 616, 689, 835, 892, 1182
SsiI CCGC 3 cut(s) 628, 863, 1149
SspI AATATT 1 cut(s) 386
SspMI CTAG 1 cut(s) 437
StyD4I CCNGG 3 cut(s) 266, 1006, 1436
StyI CCWWGG 2 cut(s) 39, 126
SwaI ATTTAAAT 1 cut(s) 390
TaaI ACNGT 5 cut(s) 121, 333, 1270, 1369, 1488
TaqI TCGA 1 cut(s) 576
TasI AATT 9 cut(s) 63, 135, 391, 486, 616, 689, 835, 892, 1182
TatI WGTACW 2 cut(s) 333, 924
TfiI GAWTC 3 cut(s) 508, 659, 748
Tru1I TTAA 9 cut(s) 27, 116, 207, 389, 518, 834, 845, 854, 879
Tru9I TTAA 9 cut(s) 27, 116, 207, 389, 518, 834, 845, 854, 879
TscAI CASTG 2 cut(s) 241, 1275
TseFI GTSAC 4 cut(s) 439, 583, 1270, 1421
TseI GCWGC 2 cut(s) 524, 1409
Tsp45I GTSAC 4 cut(s) 439, 583, 1270, 1421
TspDTI ATGAA 3 cut(s) 82, 714, 1435
TspRI CASTG 2 cut(s) 241, 1275
VneI GTGCAC 1 cut(s) 1376
VpaK11BI GGWCC 2 cut(s) 1253, 1440
XagI CCTNNNNNAGG 1 cut(s) 1447
XapI RAATTY 2 cut(s) 616, 689
XceI RCATGY 2 cut(s) 246, 256
XmiI GTMKAC 1 cut(s) 1085
XmnI GAANNNNTTC 2 cut(s) 227, 763
XspI CTAG 1 cut(s) 437
ZrmI AGTACT 1 cut(s) 335
Zsp2I ATGCAT 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.