RchiOBHm_Chr5g0067491

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000148
Physical Location & Seq
Forward (+)
73637805 .. 73639895
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34319

Sequence Viewer

Length: 1425 bp
ATGTGTAAAATAACGAGTATTGTAAACCCATTTCTCTGTTCATTAGTGGAAGGATTCCAAGCCAAGTTTATATTACTTGCAATGGCTGATGAACCTACAAGAAAGATTAGCCTGAAGGCCTTAGTAAACAGGGGGAACAAAAGAGTTATCTTTATGGAGTCTGGCCATGAATTTGTTGATGTTCTCTTAAGCTACTTGACAATCCCCATAGGAACAATTATCAAGCTTGGCCGTAACAACAGTAATTTGGCACCACTGGGAATAGGTTGCATGAACAATTTGTATGCAAGTGTTGTGAATATGGATGTGCAGCATTTCAGGACTGAAGCTTGTAGGGACATGTTGCTATGTCCTCGAAATGGAGCTGGATCGACTTTAAAGAGCCTCAAACTCAAAATTGATGACTGTGATCCTACACAGTACTTTAAGTGCTCGAATGTGTCTTGCCGCACATCTCCGGCTAGGCTAAGCTATTACAGAAGTGTTCGCTGTTGTCGTTGTGGAAATCAAATGGACTCAAAGAGCAACCTTTTAGTTGGCTGTCTTGATGGGGTGTTTGTAAAAGGACTAGCCAGACTTATAATTAGTGATGATTTACAAGTCATGCCTGCAGTAACATCAGTAAGCTCTTCTTTGTTGATGAAGCCTGGGGTCATGGATTCAAATACTATTGAGGAGGTGACTTTGGACACTGGAGTTGATGAGGTTGTCAATTTGCTGATGTGCTCATTTATATCAAAATCACCTCTGACTGATGTTCTTCTACAGCATAGACCATTAGCAAACTTGAATAAAAATATCAGTAACCAACCAATATGTGTAGATTACTATTCTGCAAGAGTAGAAGACACAGTGAATGATGAAGCAAACATTACTTTGAAGCTTATACTAAGCAAATCGAAGAAGGTGATTTGCTATGCAGAAGCAGAGGAAGATTTTGTTAATTTGCTTTTCAGCTTCCTAGTTCTTCCACTTGGATTTTTGTTAAAACAAATGCGGCTTGGTACTTTGAAGGGATGCATTGATCACCTGTACAAAAGTGTCCGGGATCTTGATCAGCAGCTCTTGAAGTCTAGATACTCTAAGGAAGTACTAGTTAATCCCAAGCTTCCCCCAGGATTTTGCTACCAGAACCATCCTTTAGGTATTGGAACGGCCACATTTCATATTGCGGCAGCTGAAATCGTGGACCCAAAATCCCCTTCTGGTGAAGACAGTGATCAAGGATTCTTAAAAGGACCAGCACTATTTGTGGTGACTGACAATCTTATTGTAAGTCCGGTATCTTCAGTCTTGGGCCCATCTATTCTGGACAAAATGAATGTGCCTATCACTGATATTGAAGTGCAAACAGTGCTTGTGGGCAAGGAAGAGGTGAGTTCTACAACTTTCCATTTCATCTCCGCAAATGAATCATTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

474

Amino Acids

52.11

Weight (kDa)

6.66

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF674 PF05056 34 - 457 3.1e-120 Protein of unknown function (DUF674)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 581
AccB1I GGYRCC 1 cut(s) 250
AciI CCGC 4 cut(s) 448, 997, 1172, 1404
AclWI GGATC 3 cut(s) 376, 404, 1056
AcoI YGGCCR 3 cut(s) 163, 229, 1155
AcsI RAATTY 1 cut(s) 170
AcuI CTGAAG 3 cut(s) 134, 345, 1272
AfaI GTAC 4 cut(s) 422, 1006, 1034, 1092
AfiI CCNNNNNNNGG 1 cut(s) 359
AflII CTTAAG 1 cut(s) 187
AflIII ACRYGT 1 cut(s) 339
AgsI TTSAA 6 cut(s) 663, 790, 880, 1012, 1069, 1343
AhlI ACTAGT 1 cut(s) 1093
AjnI CCWGG 2 cut(s) 646, 1114
AjuI GAANNNNNNNTTGG 2 cut(s) 1186, 1218
Alw21I GWGCWC 2 cut(s) 434, 728
AlwI GGATC 3 cut(s) 376, 404, 1056
AoxI GGCC 5 cut(s) 117, 163, 229, 1155, 1297
ApaI GGGCCC 1 cut(s) 1301
ApeKI GCWGC 3 cut(s) 310, 1060, 1175
ApoI RAATTY 1 cut(s) 170
AspS9I GGNCC 4 cut(s) 1189, 1238, 1297, 1298
AsuC2I CCSGG 1 cut(s) 1046
AsuHPI GGTGA 7 cut(s) 691, 735, 919, 1019, 1220, 1267, 1387
AvaII GGWCC 2 cut(s) 1189, 1238
BaeGI GKGCMC 1 cut(s) 1301
BalI TGGCCA 1 cut(s) 165
BanI GGYRCC 1 cut(s) 250
BanII GRGCYC 1 cut(s) 1301
BarI GAAGNNNNNNTAC 2 cut(s) 1061, 1093
BbsI GAAGAC 2 cut(s) 852, 1218
Bbv12I GWGCWC 2 cut(s) 434, 728
BbvI GCAGC 3 cut(s) 322, 1072, 1187
BccI CCATC 3 cut(s) 542, 1143, 1309
BceAI ACGGC 2 cut(s) 216, 1170
BciT130I CCWGG 2 cut(s) 648, 1116
BclI TGATCA 3 cut(s) 1024, 1054, 1219
BcnI CCSGG 1 cut(s) 1046
BcuI ACTAGT 1 cut(s) 1093
BfaI CTAG 5 cut(s) 462, 569, 962, 1074, 1094
BfmI CTRYAG 2 cut(s) 609, 764
BfrI CTTAAG 1 cut(s) 187
BisI GCNGC 6 cut(s) 311, 448, 998, 1061, 1173, 1176
BlpI GCTNAGC 1 cut(s) 467
BlsI GCNGC 6 cut(s) 312, 449, 999, 1062, 1174, 1177
BmcAI AGTACT 2 cut(s) 422, 1092
Bme1390I CCNGG 3 cut(s) 648, 1046, 1116
Bme18I GGWCC 2 cut(s) 1189, 1238
BmgT120I GGNCC 4 cut(s) 1189, 1238, 1297, 1298
BmiI GGNNCC 3 cut(s) 252, 1191, 1299
BmrFI CCNGG 3 cut(s) 648, 1046, 1116
BmrI ACTGGG 1 cut(s) 266
BmsI GCATC 1 cut(s) 1007
BmuI ACTGGG 1 cut(s) 266
BpiI GAAGAC 2 cut(s) 852, 1218
BpmI CTGGAG 1 cut(s) 714
Bpu1102I GCTNAGC 1 cut(s) 467
BpuMI CCSGG 1 cut(s) 1046
BsaBI GATNNNNATC 1 cut(s) 1053
BsaJI CCNNGG 2 cut(s) 647, 1114
BsaWI WCCGGW 1 cut(s) 1279
Bsc4I CCNNNNNNNGG 1 cut(s) 359
Bse1I ACTGG 2 cut(s) 261, 697
Bse3DI GCAATG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 1053
BseBI CCWGG 2 cut(s) 648, 1116
BseDI CCNNGG 2 cut(s) 647, 1114
BseGI GGATG 3 cut(s) 310, 1022, 1135
BseJI GATNNNNATC 1 cut(s) 1053
BseLI CCNNNNNNNGG 1 cut(s) 359
BseMI GCAATG 1 cut(s) 87
BseNI ACTGG 2 cut(s) 261, 697
BseRI GAGGAG 1 cut(s) 689
BseSI GKGCMC 1 cut(s) 1301
BseXI GCAGC 3 cut(s) 322, 1072, 1187
BsgI GTGCAG 1 cut(s) 329
BshFI GGCC 5 cut(s) 119, 165, 231, 1157, 1299
BshNI GGYRCC 1 cut(s) 250
BsiHKAI GWGCWC 2 cut(s) 434, 728
BsiSI CCGG 3 cut(s) 458, 1045, 1280
BslFI GGGAC 1 cut(s) 350
BslI CCNNNNNNNGG 1 cut(s) 359
BsmFI GGGAC 1 cut(s) 350
BsnI GGCC 5 cut(s) 119, 165, 231, 1157, 1299
Bsp120I GGGCCC 1 cut(s) 1297
Bsp1286I GDGCHC 3 cut(s) 434, 728, 1301
Bsp1407I TGTACA 1 cut(s) 1032
Bsp143I GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
Bsp1720I GCTNAGC 1 cut(s) 467
BspACI CCGC 4 cut(s) 448, 997, 1172, 1404
BspANI GGCC 5 cut(s) 119, 165, 231, 1157, 1299
BspLI GGNNCC 3 cut(s) 252, 1191, 1299
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 3 cut(s) 376, 404, 1056
BspQI GCTCTTC 1 cut(s) 634
BspT107I GGYRCC 1 cut(s) 250
BspTI CTTAAG 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 87
BsrGI TGTACA 1 cut(s) 1032
BsrI ACTGG 2 cut(s) 261, 697
BssECI CCNNGG 2 cut(s) 647, 1114
BssMI GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
Bst2UI CCWGG 2 cut(s) 648, 1116
Bst4CI ACNGT 6 cut(s) 242, 407, 420, 853, 1217, 1354
Bst6I CTCTTC 2 cut(s) 634, 1365
BstAFI CTTAAG 1 cut(s) 187
BstAPI GCANNNNNTGC 1 cut(s) 1354
BstAUI TGTACA 1 cut(s) 1032
BstC8I GCNNGC 1 cut(s) 609
BstDEI CTNAG 4 cut(s) 121, 467, 890, 1083
BstF5I GGATG 3 cut(s) 310, 1022, 1135
BstKTI GATC 6 cut(s) 371, 412, 1027, 1051, 1057, 1222
BstMBI GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
BstMWI GCNNNNNNNGC 1 cut(s) 1354
BstNI CCWGG 2 cut(s) 648, 1116
BstNSI RCATGY 1 cut(s) 343
BstSCI CCNGG 3 cut(s) 646, 1044, 1114
BstSFI CTRYAG 2 cut(s) 609, 764
BstSLI GKGCMC 1 cut(s) 1301
BstV1I GCAGC 3 cut(s) 322, 1072, 1187
BstV2I GAAGAC 2 cut(s) 852, 1218
BstX2I RGATCY 1 cut(s) 1048
BstYI RGATCY 1 cut(s) 1048
BsuRI GGCC 5 cut(s) 119, 165, 231, 1157, 1299
BtsCI GGATG 3 cut(s) 310, 1022, 1135
BtsIMutI CAGTG 6 cut(s) 254, 690, 858, 1222, 1332, 1359
Cac8I GCNNGC 1 cut(s) 609
Cfr13I GGNCC 4 cut(s) 1189, 1238, 1297, 1298
Csp6I GTAC 4 cut(s) 421, 1005, 1033, 1091
CviAII CATG 5 cut(s) 167, 271, 340, 604, 655
CviQI GTAC 4 cut(s) 421, 1005, 1033, 1091
DdeI CTNAG 4 cut(s) 121, 467, 890, 1083
DpnI GATC 6 cut(s) 370, 411, 1026, 1050, 1056, 1221
DpnII GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
DraI TTTAAA 1 cut(s) 378
EaeI YGGCCR 3 cut(s) 163, 229, 1155
Eam1104I CTCTTC 2 cut(s) 634, 1365
EarI CTCTTC 2 cut(s) 634, 1365
Eco147I AGGCCT 1 cut(s) 119
Eco24I GRGCYC 1 cut(s) 1301
Eco47I GGWCC 2 cut(s) 1189, 1238
Eco57I CTGAAG 3 cut(s) 134, 345, 1272
EcoRII CCWGG 2 cut(s) 646, 1114
EcoT22I ATGCAT 1 cut(s) 1022
EcoT38I GRGCYC 1 cut(s) 1301
FaeI CATG 5 cut(s) 170, 274, 343, 607, 658
FalI AAGNNNNNCTT 2 cut(s) 616, 648
FaqI GGGAC 1 cut(s) 350
FatI CATG 5 cut(s) 166, 270, 339, 603, 654
FbaI TGATCA 3 cut(s) 1024, 1054, 1219
Fnu4HI GCNGC 6 cut(s) 311, 448, 998, 1061, 1173, 1176
FokI GGATG 3 cut(s) 317, 1029, 1122
FriOI GRGCYC 1 cut(s) 1301
Fsp4HI GCNGC 6 cut(s) 311, 448, 998, 1061, 1173, 1176
FspBI CTAG 5 cut(s) 462, 569, 962, 1074, 1094
GluI GCNGC 6 cut(s) 311, 448, 998, 1061, 1173, 1176
GsuI CTGGAG 1 cut(s) 714
HaeIII GGCC 5 cut(s) 119, 165, 231, 1157, 1299
HapII CCGG 3 cut(s) 458, 1045, 1280
Hin1II CATG 5 cut(s) 170, 274, 343, 607, 658
HindIII AAGCTT 4 cut(s) 224, 327, 881, 1106
HinfI GANTC 6 cut(s) 54, 158, 515, 659, 1227, 1412
HpaII CCGG 3 cut(s) 458, 1045, 1280
HphI GGTGA 7 cut(s) 691, 735, 919, 1019, 1220, 1267, 1387
Hpy166II GTNNAC 3 cut(s) 25, 127, 1189
Hpy188I TCNGA 1 cut(s) 750
Hpy188III TCNNGA 7 cut(s) 319, 545, 1052, 1066, 1074, 1310, 1422
Hpy8I GTNNAC 3 cut(s) 25, 127, 1189
HpyAV CCTTC 5 cut(s) 44, 109, 898, 1006, 1212
HpyCH4III ACNGT 6 cut(s) 242, 407, 420, 853, 1217, 1354
HpyCH4V TGCA 9 cut(s) 80, 270, 287, 310, 611, 836, 920, 1020, 1348
HpyF10VI GCNNNNNNNGC 1 cut(s) 1354
HpyF3I CTNAG 4 cut(s) 121, 467, 890, 1083
Hsp92II CATG 5 cut(s) 170, 274, 343, 607, 658
Ksp22I TGATCA 3 cut(s) 1024, 1054, 1219
Kzo9I GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
LguI GCTCTTC 1 cut(s) 634
LmnI GCTCC 1 cut(s) 362
Lsp1109I GCAGC 3 cut(s) 322, 1072, 1187
LweI GCATC 1 cut(s) 1007
MaeI CTAG 5 cut(s) 462, 569, 962, 1074, 1094
MaeIII GTNAC 5 cut(s) 233, 613, 679, 803, 1255
MalI GATC 6 cut(s) 370, 411, 1026, 1050, 1056, 1221
MboI GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
MboII GAAGA 9 cut(s) 621, 752, 857, 913, 944, 959, 1223, 1278, 1382
MflI RGATCY 1 cut(s) 1048
MhlI GDGCHC 3 cut(s) 434, 728, 1301
MlsI TGGCCA 1 cut(s) 165
MluCI AATT 8 cut(s) 170, 216, 244, 277, 396, 582, 712, 943
MluNI TGGCCA 1 cut(s) 165
MlyI GAGTC 2 cut(s) 167, 509
MnlI CCTC 8 cut(s) 363, 395, 667, 670, 697, 756, 922, 1366
Mox20I TGGCCA 1 cut(s) 165
Mph1103I ATGCAT 1 cut(s) 1022
MscI TGGCCA 1 cut(s) 165
MseI TTAA 7 cut(s) 188, 377, 426, 942, 986, 1098, 1232
Msp20I TGGCCA 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 1178
MspCI CTTAAG 1 cut(s) 187
MspI CCGG 3 cut(s) 458, 1045, 1280
MspR9I CCNGG 3 cut(s) 648, 1046, 1116
MvaI CCWGG 2 cut(s) 648, 1116
MwoI GCNNNNNNNGC 1 cut(s) 1354
NciI CCSGG 1 cut(s) 1046
NdeII GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
NlaIII CATG 5 cut(s) 170, 274, 343, 607, 658
NlaIV GGNNCC 3 cut(s) 252, 1191, 1299
NmuCI GTSAC 2 cut(s) 679, 1255
NsiI ATGCAT 1 cut(s) 1022
NspI RCATGY 1 cut(s) 343
PceI AGGCCT 1 cut(s) 119
PciI ACATGT 1 cut(s) 339
PciSI GCTCTTC 1 cut(s) 634
PcsI WCGNNNNNNNCGW 1 cut(s) 493
PfeI GAWTC 4 cut(s) 54, 659, 1227, 1412
PfoI TCCNGGA 1 cut(s) 1044
PkrI GCNGC 6 cut(s) 312, 449, 999, 1062, 1174, 1177
PleI GAGTC 2 cut(s) 166, 509
PpsI GAGTC 2 cut(s) 166, 509
PscI ACATGT 1 cut(s) 339
PsiI TTATAA 1 cut(s) 581
Psp6I CCWGG 2 cut(s) 646, 1114
PspGI CCWGG 2 cut(s) 646, 1114
PspN4I GGNNCC 3 cut(s) 252, 1191, 1299
PspOMI GGGCCC 1 cut(s) 1297
PspPI GGNCC 4 cut(s) 1189, 1238, 1297, 1298
PstI CTGCAG 1 cut(s) 613
PsuI RGATCY 1 cut(s) 1048
PvuII CAGCTG 1 cut(s) 1178
RsaI GTAC 4 cut(s) 422, 1006, 1034, 1092
RsaNI GTAC 4 cut(s) 421, 1005, 1033, 1091
SapI GCTCTTC 1 cut(s) 634
SaqAI TTAA 7 cut(s) 188, 377, 426, 942, 986, 1098, 1232
SatI GCNGC 6 cut(s) 311, 448, 998, 1061, 1173, 1176
Sau3AI GATC 6 cut(s) 368, 409, 1024, 1048, 1054, 1219
Sau96I GGNCC 4 cut(s) 1189, 1238, 1297, 1298
ScaI AGTACT 2 cut(s) 422, 1092
SchI GAGTC 2 cut(s) 167, 509
ScrFI CCNGG 3 cut(s) 648, 1046, 1116
SduI GDGCHC 3 cut(s) 434, 728, 1301
SfaNI GCATC 1 cut(s) 1007
SfcI CTRYAG 2 cut(s) 609, 764
SinI GGWCC 2 cut(s) 1189, 1238
SmlI CTYRAG 1 cut(s) 187
SmoI CTYRAG 1 cut(s) 187
SpeI ACTAGT 1 cut(s) 1093
Sse9I AATT 8 cut(s) 170, 216, 244, 277, 396, 582, 712, 943
SseBI AGGCCT 1 cut(s) 119
SsiI CCGC 4 cut(s) 448, 997, 1172, 1404
SspMI CTAG 5 cut(s) 462, 569, 962, 1074, 1094
StuI AGGCCT 1 cut(s) 119
StyD4I CCNGG 3 cut(s) 646, 1044, 1114
TaaI ACNGT 6 cut(s) 242, 407, 420, 853, 1217, 1354
TaqI TCGA 4 cut(s) 355, 371, 434, 899
TasI AATT 8 cut(s) 170, 216, 244, 277, 396, 582, 712, 943
TatI WGTACW 3 cut(s) 420, 1032, 1090
TauI GCSGC 3 cut(s) 450, 1000, 1175
TfiI GAWTC 4 cut(s) 54, 659, 1227, 1412
Tru1I TTAA 7 cut(s) 188, 377, 426, 942, 986, 1098, 1232
Tru9I TTAA 7 cut(s) 188, 377, 426, 942, 986, 1098, 1232
TscAI CASTG 6 cut(s) 261, 697, 858, 1222, 1339, 1359
TseFI GTSAC 2 cut(s) 679, 1255
TseI GCWGC 3 cut(s) 310, 1060, 1175
Tsp45I GTSAC 2 cut(s) 679, 1255
TspRI CASTG 6 cut(s) 261, 697, 858, 1222, 1339, 1359
Vha464I CTTAAG 1 cut(s) 187
VpaK11BI GGWCC 2 cut(s) 1189, 1238
XapI RAATTY 1 cut(s) 170
XbaI TCTAGA 1 cut(s) 1073
XceI RCATGY 1 cut(s) 343
XspI CTAG 5 cut(s) 462, 569, 962, 1074, 1094
ZrmI AGTACT 2 cut(s) 422, 1092
Zsp2I ATGCAT 1 cut(s) 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.