BEST Arabidopsis thaliana protein match is Protein of
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1622 |
| AccI | GTMKAC | 2 cut(s) | 1373, 1573 |
| AciI | CCGC | 2 cut(s) | 594, 1117 |
| AcsI | RAATTY | 4 cut(s) | 205, 685, 1230, 1269 |
| AcuI | CTGAAG | 5 cut(s) | 97, 669, 869, 889, 1057 |
| AcvI | CACGTG | 1 cut(s) | 926 |
| AfaI | GTAC | 7 cut(s) | 25, 180, 350, 598, 865, 1154, 1545 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 593, 926, 1363, 1484 |
| AflII | CTTAAG | 1 cut(s) | 737 |
| AgsI | TTSAA | 9 cut(s) | 40, 322, 685, 797, 963, 1192, 1423, 1501, 1510 |
| AjnI | CCWGG | 1 cut(s) | 1237 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1247, 1279, 1502, 1534 |
| AluBI | AGCT | 7 cut(s) | 36, 151, 293, 603, 622, 1003, 1456 |
| AluI | AGCT | 7 cut(s) | 36, 151, 293, 603, 622, 1003, 1456 |
| Alw21I | GWGCWC | 1 cut(s) | 54 |
| Alw26I | GTCTC | 4 cut(s) | 258, 388, 633, 809 |
| Alw44I | GTGCAC | 1 cut(s) | 50 |
| AoxI | GGCC | 3 cut(s) | 42, 1284, 1466 |
| ApaLI | GTGCAC | 1 cut(s) | 50 |
| ApeKI | GCWGC | 2 cut(s) | 290, 1627 |
| ApoI | RAATTY | 4 cut(s) | 205, 685, 1230, 1269 |
| AspS9I | GGNCC | 2 cut(s) | 310, 1427 |
| AsuC2I | CCSGG | 1 cut(s) | 362 |
| AsuHPI | GGTGA | 4 cut(s) | 347, 479, 1405, 1607 |
| AvaII | GGWCC | 2 cut(s) | 310, 1427 |
| BaeGI | GKGCMC | 1 cut(s) | 54 |
| BanII | GRGCYC | 1 cut(s) | 1226 |
| BbrPI | CACGTG | 1 cut(s) | 926 |
| Bbv12I | GWGCWC | 1 cut(s) | 54 |
| BbvI | GCAGC | 2 cut(s) | 302, 1639 |
| BccI | CCATC | 4 cut(s) | 629, 1021, 1389, 1487 |
| BciT130I | CCWGG | 1 cut(s) | 1239 |
| BclI | TGATCA | 2 cut(s) | 514, 778 |
| BcnI | CCSGG | 1 cut(s) | 362 |
| BcoDI | GTCTC | 4 cut(s) | 258, 388, 633, 809 |
| BfrI | CTTAAG | 1 cut(s) | 737 |
| BglII | AGATCT | 1 cut(s) | 1168 |
| BisI | GCNGC | 2 cut(s) | 291, 1628 |
| BlsI | GCNGC | 2 cut(s) | 292, 1629 |
| BmcAI | AGTACT | 2 cut(s) | 25, 350 |
| Bme1390I | CCNGG | 2 cut(s) | 362, 1239 |
| Bme18I | GGWCC | 2 cut(s) | 310, 1427 |
| BmgT120I | GGNCC | 2 cut(s) | 310, 1427 |
| BmrFI | CCNGG | 2 cut(s) | 362, 1239 |
| BmsI | GCATC | 4 cut(s) | 537, 936, 1104, 1592 |
| Bpu10I | CCTNAGC | 1 cut(s) | 376 |
| BpuEI | CTTGAG | 1 cut(s) | 1395 |
| BpuMI | CCSGG | 1 cut(s) | 362 |
| BsaAI | YACGTR | 1 cut(s) | 926 |
| BsaBI | GATNNNNATC | 1 cut(s) | 934 |
| BsaJI | CCNNGG | 2 cut(s) | 45, 869 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 593, 926, 1363, 1484 |
| Bse1I | ACTGG | 2 cut(s) | 182, 1581 |
| Bse3DI | GCAATG | 1 cut(s) | 301 |
| Bse8I | GATNNNNATC | 1 cut(s) | 934 |
| BseBI | CCWGG | 1 cut(s) | 1239 |
| BseDI | CCNNGG | 2 cut(s) | 45, 869 |
| BseGI | GGATG | 6 cut(s) | 500, 640, 1142, 1333, 1353, 1528 |
| BseJI | GATNNNNATC | 1 cut(s) | 934 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 593, 926, 1363, 1484 |
| BseMI | GCAATG | 1 cut(s) | 301 |
| BseMII | CTCAG | 3 cut(s) | 180, 1211, 1376 |
| BseNI | ACTGG | 2 cut(s) | 182, 1581 |
| BseRI | GAGGAG | 1 cut(s) | 1574 |
| BseSI | GKGCMC | 1 cut(s) | 54 |
| BseXI | GCAGC | 2 cut(s) | 302, 1639 |
| BshFI | GGCC | 3 cut(s) | 44, 1286, 1468 |
| BsiHKAI | GWGCWC | 1 cut(s) | 54 |
| BsiSI | CCGG | 1 cut(s) | 362 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 593, 926, 1363, 1484 |
| BsmAI | GTCTC | 4 cut(s) | 258, 388, 633, 809 |
| BsnI | GGCC | 3 cut(s) | 44, 1286, 1468 |
| Bsp1286I | GDGCHC | 2 cut(s) | 54, 1226 |
| Bsp1407I | TGTACA | 1 cut(s) | 1152 |
| Bsp143I | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| BspACI | CCGC | 2 cut(s) | 594, 1117 |
| BspANI | GGCC | 3 cut(s) | 44, 1286, 1468 |
| BspCNI | CTCAG | 3 cut(s) | 179, 1212, 1375 |
| BspQI | GCTCTTC | 1 cut(s) | 961 |
| BspTI | CTTAAG | 1 cut(s) | 737 |
| BsrDI | GCAATG | 1 cut(s) | 301 |
| BsrGI | TGTACA | 1 cut(s) | 1152 |
| BsrI | ACTGG | 2 cut(s) | 182, 1581 |
| BssECI | CCNNGG | 2 cut(s) | 45, 869 |
| BssMI | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| BssNAI | GTATAC | 1 cut(s) | 1374 |
| BssT1I | CCWWGG | 2 cut(s) | 45, 869 |
| Bst1107I | GTATAC | 1 cut(s) | 1374 |
| Bst2UI | CCWGG | 1 cut(s) | 1239 |
| Bst4CI | ACNGT | 8 cut(s) | 23, 31, 348, 461, 820, 1319, 1444, 1644 |
| Bst6I | CTCTTC | 5 cut(s) | 116, 645, 831, 961, 1076 |
| BstAFI | CTTAAG | 1 cut(s) | 737 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1589 |
| BstAUI | TGTACA | 1 cut(s) | 1152 |
| BstBAI | YACGTR | 1 cut(s) | 926 |
| BstDEI | CTNAG | 4 cut(s) | 166, 376, 1220, 1362 |
| BstF5I | GGATG | 6 cut(s) | 500, 640, 1142, 1333, 1353, 1528 |
| BstKTI | GATC | 4 cut(s) | 517, 781, 1147, 1171 |
| BstMAI | GTCTC | 4 cut(s) | 258, 388, 633, 809 |
| BstMBI | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 600, 1589 |
| BstNI | CCWGG | 1 cut(s) | 1239 |
| BstSCI | CCNGG | 2 cut(s) | 360, 1237 |
| BstSLI | GKGCMC | 1 cut(s) | 54 |
| BstV1I | GCAGC | 2 cut(s) | 302, 1639 |
| BstX2I | RGATCY | 1 cut(s) | 1168 |
| BstYI | RGATCY | 1 cut(s) | 1168 |
| BstZ17I | GTATAC | 1 cut(s) | 1374 |
| BsuRI | GGCC | 3 cut(s) | 44, 1286, 1468 |
| BtsCI | GGATG | 6 cut(s) | 500, 640, 1142, 1333, 1353, 1528 |
| BtsIMutI | CAGTG | 4 cut(s) | 189, 765, 825, 845 |
| Cfr13I | GGNCC | 2 cut(s) | 310, 1427 |
| CseI | GACGC | 1 cut(s) | 1559 |
| Csp6I | GTAC | 7 cut(s) | 24, 179, 349, 597, 864, 1153, 1544 |
| CviAII | CATG | 5 cut(s) | 199, 472, 879, 1369, 1435 |
| CviQI | GTAC | 7 cut(s) | 24, 179, 349, 597, 864, 1153, 1544 |
| DdeI | CTNAG | 4 cut(s) | 166, 376, 1220, 1362 |
| DpnI | GATC | 4 cut(s) | 516, 780, 1146, 1170 |
| DpnII | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| Eam1104I | CTCTTC | 5 cut(s) | 116, 645, 831, 961, 1076 |
| EarI | CTCTTC | 5 cut(s) | 116, 645, 831, 961, 1076 |
| Eco130I | CCWWGG | 2 cut(s) | 45, 869 |
| Eco147I | AGGCCT | 3 cut(s) | 44, 1286, 1468 |
| Eco24I | GRGCYC | 1 cut(s) | 1226 |
| Eco47I | GGWCC | 2 cut(s) | 310, 1427 |
| Eco57I | CTGAAG | 5 cut(s) | 97, 669, 869, 889, 1057 |
| Eco72I | CACGTG | 1 cut(s) | 926 |
| EcoO109I | RGGNCCY | 1 cut(s) | 310 |
| EcoRI | GAATTC | 1 cut(s) | 1269 |
| EcoRII | CCWGG | 1 cut(s) | 1237 |
| EcoT14I | CCWWGG | 2 cut(s) | 45, 869 |
| EcoT38I | GRGCYC | 1 cut(s) | 1226 |
| ErhI | CCWWGG | 2 cut(s) | 45, 869 |
| FaeI | CATG | 5 cut(s) | 202, 475, 882, 1372, 1438 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 515, 547, 592, 624 |
| FatI | CATG | 5 cut(s) | 198, 471, 878, 1368, 1434 |
| FbaI | TGATCA | 2 cut(s) | 514, 778 |
| FblI | GTMKAC | 2 cut(s) | 1373, 1573 |
| Fnu4HI | GCNGC | 2 cut(s) | 291, 1628 |
| FokI | GGATG | 6 cut(s) | 487, 647, 1149, 1340, 1340, 1535 |
| FriOI | GRGCYC | 1 cut(s) | 1226 |
| Fsp4HI | GCNGC | 2 cut(s) | 291, 1628 |
| GluI | GCNGC | 2 cut(s) | 291, 1628 |
| HaeIII | GGCC | 3 cut(s) | 44, 1286, 1468 |
| HapII | CCGG | 1 cut(s) | 362 |
| HgaI | GACGC | 1 cut(s) | 1559 |
| Hin1II | CATG | 5 cut(s) | 202, 475, 882, 1372, 1438 |
| HindIII | AAGCTT | 4 cut(s) | 149, 601, 620, 1001 |
| HpaII | CCGG | 1 cut(s) | 362 |
| HphI | GGTGA | 4 cut(s) | 347, 479, 1405, 1607 |
| Hpy166II | GTNNAC | 7 cut(s) | 52, 342, 866, 1374, 1396, 1440, 1574 |
| Hpy188I | TCNGA | 2 cut(s) | 416, 1097 |
| Hpy188III | TCNNGA | 8 cut(s) | 101, 121, 263, 518, 913, 1081, 1172, 1274 |
| Hpy8I | GTNNAC | 7 cut(s) | 52, 342, 866, 1374, 1396, 1440, 1574 |
| HpyAV | CCTTC | 5 cut(s) | 34, 868, 913, 930, 1368 |
| HpyCH4III | ACNGT | 8 cut(s) | 23, 31, 348, 461, 820, 1319, 1444, 1644 |
| HpyCH4IV | ACGT | 1 cut(s) | 925 |
| HpyCH4V | TGCA | 8 cut(s) | 52, 187, 198, 215, 290, 306, 949, 1040 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 600, 1589 |
| HpyF3I | CTNAG | 4 cut(s) | 166, 376, 1220, 1362 |
| HpySE526I | ACGT | 1 cut(s) | 925 |
| Hsp92II | CATG | 5 cut(s) | 202, 475, 882, 1372, 1438 |
| Ksp22I | TGATCA | 2 cut(s) | 514, 778 |
| Kzo9I | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| LguI | GCTCTTC | 1 cut(s) | 961 |
| Lsp1109I | GCAGC | 2 cut(s) | 302, 1639 |
| LweI | GCATC | 4 cut(s) | 537, 936, 1104, 1592 |
| MaeII | ACGT | 1 cut(s) | 925 |
| MaeIII | GTNAC | 3 cut(s) | 559, 628, 1444 |
| MalI | GATC | 4 cut(s) | 516, 780, 1146, 1170 |
| MboI | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| MfeI | CAATTG | 1 cut(s) | 401 |
| MflI | RGATCY | 1 cut(s) | 1168 |
| MhlI | GDGCHC | 2 cut(s) | 54, 1226 |
| MlyI | GAGTC | 5 cut(s) | 347, 415, 546, 636, 910 |
| MseI | TTAA | 7 cut(s) | 275, 428, 590, 660, 738, 1106, 1607 |
| MspA1I | CMGCKG | 1 cut(s) | 293 |
| MspCI | CTTAAG | 1 cut(s) | 737 |
| MspI | CCGG | 1 cut(s) | 362 |
| MspR9I | CCNGG | 2 cut(s) | 362, 1239 |
| MunI | CAATTG | 1 cut(s) | 401 |
| MvaI | CCWGG | 1 cut(s) | 1239 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 600, 1589 |
| NciI | CCSGG | 1 cut(s) | 362 |
| NdeII | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| NlaIII | CATG | 5 cut(s) | 202, 475, 882, 1372, 1438 |
| NmuCI | GTSAC | 1 cut(s) | 628 |
| PceI | AGGCCT | 3 cut(s) | 44, 1286, 1468 |
| PciSI | GCTCTTC | 1 cut(s) | 961 |
| PfeI | GAWTC | 5 cut(s) | 173, 296, 411, 1098, 1598 |
| PkrI | GCNGC | 2 cut(s) | 292, 1629 |
| PleI | GAGTC | 5 cut(s) | 346, 414, 546, 635, 910 |
| PmaCI | CACGTG | 1 cut(s) | 926 |
| PmlI | CACGTG | 1 cut(s) | 926 |
| PpsI | GAGTC | 5 cut(s) | 346, 414, 546, 635, 910 |
| Ppu21I | YACGTR | 1 cut(s) | 926 |
| PpuMI | RGGWCCY | 1 cut(s) | 310 |
| PsiI | TTATAA | 1 cut(s) | 1622 |
| Psp5II | RGGWCCY | 1 cut(s) | 310 |
| Psp6I | CCWGG | 1 cut(s) | 1237 |
| PspCI | CACGTG | 1 cut(s) | 926 |
| PspGI | CCWGG | 1 cut(s) | 1237 |
| PspPI | GGNCC | 2 cut(s) | 310, 1427 |
| PspPPI | RGGWCCY | 1 cut(s) | 310 |
| PsuI | RGATCY | 1 cut(s) | 1168 |
| PvuII | CAGCTG | 1 cut(s) | 293 |
| RsaI | GTAC | 7 cut(s) | 25, 180, 350, 598, 865, 1154, 1545 |
| RsaNI | GTAC | 7 cut(s) | 24, 179, 349, 597, 864, 1153, 1544 |
| SapI | GCTCTTC | 1 cut(s) | 961 |
| SaqAI | TTAA | 7 cut(s) | 275, 428, 590, 660, 738, 1106, 1607 |
| SatI | GCNGC | 2 cut(s) | 291, 1628 |
| Sau3AI | GATC | 4 cut(s) | 514, 778, 1144, 1168 |
| Sau96I | GGNCC | 2 cut(s) | 310, 1427 |
| ScaI | AGTACT | 2 cut(s) | 25, 350 |
| SchI | GAGTC | 5 cut(s) | 347, 415, 546, 636, 910 |
| ScrFI | CCNGG | 2 cut(s) | 362, 1239 |
| SduI | GDGCHC | 2 cut(s) | 54, 1226 |
| SfaNI | GCATC | 4 cut(s) | 537, 936, 1104, 1592 |
| SinI | GGWCC | 2 cut(s) | 310, 1427 |
| SmlI | CTYRAG | 2 cut(s) | 737, 1410 |
| SmoI | CTYRAG | 2 cut(s) | 737, 1410 |
| SseBI | AGGCCT | 3 cut(s) | 44, 1286, 1468 |
| SsiI | CCGC | 2 cut(s) | 594, 1117 |
| SspI | AATATT | 3 cut(s) | 229, 887, 1213 |
| StuI | AGGCCT | 3 cut(s) | 44, 1286, 1468 |
| StyD4I | CCNGG | 2 cut(s) | 360, 1237 |
| StyI | CCWWGG | 2 cut(s) | 45, 869 |
| TaaI | ACNGT | 8 cut(s) | 23, 31, 348, 461, 820, 1319, 1444, 1644 |
| TaiI | ACGT | 1 cut(s) | 928 |
| TaqI | TCGA | 3 cut(s) | 262, 409, 1196 |
| TaqII | GACCGA | 1 cut(s) | 1444 |
| TatI | WGTACW | 5 cut(s) | 23, 348, 863, 1152, 1543 |
| TfiI | GAWTC | 5 cut(s) | 173, 296, 411, 1098, 1598 |
| Tru1I | TTAA | 7 cut(s) | 275, 428, 590, 660, 738, 1106, 1607 |
| Tru9I | TTAA | 7 cut(s) | 275, 428, 590, 660, 738, 1106, 1607 |
| TscAI | CASTG | 4 cut(s) | 189, 772, 825, 852 |
| TseFI | GTSAC | 1 cut(s) | 628 |
| TseI | GCWGC | 2 cut(s) | 290, 1627 |
| Tsp45I | GTSAC | 1 cut(s) | 628 |
| TspDTI | ATGAA | 5 cut(s) | 215, 408, 489, 1090, 1518 |
| TspGWI | ACGGA | 1 cut(s) | 647 |
| TspRI | CASTG | 4 cut(s) | 189, 772, 825, 852 |
| Vha464I | CTTAAG | 1 cut(s) | 737 |
| VneI | GTGCAC | 1 cut(s) | 50 |
| VpaK11BI | GGWCC | 2 cut(s) | 310, 1427 |
| XapI | RAATTY | 4 cut(s) | 205, 685, 1230, 1269 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 876 |
| XmiI | GTMKAC | 2 cut(s) | 1373, 1573 |
| ZrmI | AGTACT | 2 cut(s) | 25, 350 |