Rorug05G0385800

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000148
Physical Location & Seq
Forward (+)
52367814 .. 52369147
1334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0385800.1

Sequence Viewer

Length: 1098 bp
ATGCACTTGCAGCTTGGTGAAGTTTCCACTGTTGTTGTCTCCACACCAGAAGCCGCCAAAGAGATTATGAGAACTCATGATAGCATCTTTGCTTTCAGGCCACTCCTGCTTGCTCCGGATATCATCTCTTATGGCGGTGCAGGCATTGCCTTTGCACCATATGGAGAATACTGGAGACAAATGCGCAAGATCTGCGGTTCAGTGCTGCTGAACTCGAAAAGGGTGGAGTCATTTCAGTGGATCAGGGAAGAAGAGGTATCTCATTTGCTCGAATTCATTCGTGCAAACTTTGGATCACCTATCAACCTTGGGGAGCAGATTTTTTTCAATGACATATGGAATGACAGCCAAAGTGGCTTTTGTGGGATGAGGCCTAAACTTGGGAAGATTCATAGAGGACTCGATGAGATACTCGAAAACATTGTTAAAGATCATAAAGCTACCAAGACTAGAGGCATGGATGGAGCAAATGATCTGCTAAGCGTTCTTCTAAATCTAAAGCAGCTCGGTGAGCTTGAAGTTCCCTTAACAAATGACCATATCAAAGCGGTTATGCTAGTTAGTGTGCTATGTTTGTCTTCTCAATTCTTATCAACTTTATCATATTCTTCTACTGAGGTTCAACTGTTGCATTTCAGGACATTTTCAAAGCTGGGATGTTCAACATCGTCTTCAACTGTTGAGTGGGCAATGTCGGAAATGGTAAAAACGCCACGAGTGATGGAAAAGGCACAAGCAGAGGTGAGGCAAGTCTTTGTTGCTAAAGGAAATGTCGATGAAACATGTCTTCAGCAACTGAAATTTCTGAAGGCGGTGATCAAAGAGACTTGGAGATTACACCCACCTCTTCCTTTGCTGCTTCCAAAAGAATGTAGTGAAAGCTGTGAGATTAATGGACATGGGATACCGGTGAAAACCAAAGTGATTGTGAACGCATGGGAAGGAGGATATGTCCTGGAATGGCATTTGCTACACTCAACATTGAACTCCCACTTGCACAACTGCTCTTCCATTTCAACTGGAAGCTCCCAGAAGAGGGTTTGGACAGGACTGAGAATTTCGGGGCGACAGTTCGGAAAAAGAAAGAGCTACACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

365

Amino Acids

41.01

Weight (kDa)

8.7

Isoelectric Point (pI)

36.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 104 5.4e-10 Cytochrome P450
p450 PF00067 219 - 313 2.1e-26 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 185
AccIII TCCGGA 1 cut(s) 115
AciI CCGC 5 cut(s) 54, 135, 195, 548, 812
AclWI GGATC 2 cut(s) 248, 301
AcsI RAATTY 3 cut(s) 272, 800, 1056
AcuI CTGAAG 2 cut(s) 773, 827
AfiI CCNNNNNNNGG 3 cut(s) 380, 1035, 1036
AflIII ACRYGT 1 cut(s) 782
AgeI ACCGGT 1 cut(s) 907
AgsI TTSAA 8 cut(s) 328, 518, 623, 648, 663, 675, 985, 1017
AjnI CCWGG 1 cut(s) 954
AluBI AGCT 8 cut(s) 13, 440, 505, 514, 652, 882, 1026, 1089
AluI AGCT 8 cut(s) 13, 440, 505, 514, 652, 882, 1026, 1089
Alw26I GTCTC 3 cut(s) 43, 169, 818
AlwI GGATC 2 cut(s) 248, 301
AlwNI CAGNNNCTG 1 cut(s) 796
Aor13HI TCCGGA 1 cut(s) 115
AoxI GGCC 2 cut(s) 98, 371
ApeKI GCWGC 4 cut(s) 10, 205, 502, 856
ApoI RAATTY 3 cut(s) 272, 800, 1056
AseI ATTAAT 1 cut(s) 891
AsiGI ACCGGT 1 cut(s) 907
Asp700I GAANNNNTTC 1 cut(s) 276
AspLEI GCGC 1 cut(s) 186
AsuHPI GGTGA 6 cut(s) 29, 288, 521, 754, 826, 922
BauI CACGAG 1 cut(s) 714
BbsI GAAGAC 3 cut(s) 570, 663, 779
BbvI GCAGC 4 cut(s) 22, 192, 514, 843
BccI CCATC 2 cut(s) 455, 715
BciT130I CCWGG 1 cut(s) 956
BciVI GTATCC 1 cut(s) 897
BclI TGATCA 1 cut(s) 816
BcoDI GTCTC 3 cut(s) 43, 169, 818
BfaI CTAG 2 cut(s) 450, 557
BfuI GTATCC 1 cut(s) 897
BglI GCCNNNNNGGC 1 cut(s) 354
BglII AGATCT 1 cut(s) 189
BisI GCNGC 5 cut(s) 11, 54, 206, 503, 857
BlpI GCTNAGC 1 cut(s) 479
BlsI GCNGC 5 cut(s) 12, 55, 207, 504, 858
Bme1390I CCNGG 1 cut(s) 956
BmrFI CCNGG 1 cut(s) 956
BmsI GCATC 1 cut(s) 93
BpiI GAAGAC 3 cut(s) 570, 663, 779
BpmI CTGGAG 1 cut(s) 193
Bpu1102I GCTNAGC 1 cut(s) 479
BsaJI CCNNGG 1 cut(s) 307
BsaWI WCCGGW 2 cut(s) 115, 907
BsaXI ACNNNNNCTCC 2 cut(s) 936, 966
Bsc4I CCNNNNNNNGG 3 cut(s) 380, 1035, 1036
Bse118I RCCGGY 1 cut(s) 907
Bse1I ACTGG 2 cut(s) 176, 1024
Bse3DI GCAATG 2 cut(s) 144, 696
BseAI TCCGGA 1 cut(s) 115
BseBI CCWGG 1 cut(s) 956
BseDI CCNNGG 1 cut(s) 307
BseGI GGATG 3 cut(s) 372, 466, 662
BseLI CCNNNNNNNGG 3 cut(s) 380, 1035, 1036
BseMI GCAATG 2 cut(s) 144, 696
BseMII CTCAG 2 cut(s) 606, 1043
BseNI ACTGG 2 cut(s) 176, 1024
BseXI GCAGC 4 cut(s) 22, 192, 514, 843
BseYI CCCAGC 1 cut(s) 652
BsgI GTGCAG 1 cut(s) 159
BshFI GGCC 2 cut(s) 100, 373
BshTI ACCGGT 1 cut(s) 907
BsiSI CCGG 2 cut(s) 116, 908
BslI CCNNNNNNNGG 3 cut(s) 380, 1035, 1036
BsmAI GTCTC 3 cut(s) 43, 169, 818
BsnI GGCC 2 cut(s) 100, 373
Bsp13I TCCGGA 1 cut(s) 115
Bsp143I GATC 6 cut(s) 189, 240, 293, 430, 472, 816
Bsp1720I GCTNAGC 1 cut(s) 479
BspACI CCGC 5 cut(s) 54, 135, 195, 548, 812
BspANI GGCC 2 cut(s) 100, 373
BspCNI CTCAG 2 cut(s) 607, 1044
BspEI TCCGGA 1 cut(s) 115
BspHI TCATGA 1 cut(s) 76
BspPI GGATC 2 cut(s) 248, 301
BspQI GCTCTTC 1 cut(s) 1012
BsrDI GCAATG 2 cut(s) 144, 696
BsrFI RCCGGY 1 cut(s) 907
BsrI ACTGG 2 cut(s) 176, 1024
BssAI RCCGGY 1 cut(s) 907
BssECI CCNNGG 1 cut(s) 307
BssMI GATC 6 cut(s) 189, 240, 293, 430, 472, 816
BssSI CACGAG 1 cut(s) 714
BssT1I CCWWGG 1 cut(s) 307
Bst2BI CACGAG 1 cut(s) 714
Bst2UI CCWGG 1 cut(s) 956
Bst4CI ACNGT 4 cut(s) 31, 627, 679, 1071
Bst6I CTCTTC 4 cut(s) 246, 852, 1012, 1028
BstAPI GCANNNNNTGC 2 cut(s) 146, 192
BstC8I GCNNGC 2 cut(s) 111, 142
BstDEI CTNAG 3 cut(s) 479, 615, 1052
BstF5I GGATG 3 cut(s) 372, 466, 662
BstHHI GCGC 1 cut(s) 186
BstKTI GATC 6 cut(s) 192, 243, 296, 433, 475, 819
BstMAI GTCTC 3 cut(s) 43, 169, 818
BstMBI GATC 6 cut(s) 189, 240, 293, 430, 472, 816
BstMWI GCNNNNNNNGC 7 cut(s) 10, 106, 141, 146, 192, 354, 511
BstNI CCWGG 1 cut(s) 956
BstNSI RCATGY 1 cut(s) 786
BstSCI CCNGG 1 cut(s) 954
BstV1I GCAGC 4 cut(s) 22, 192, 514, 843
BstV2I GAAGAC 3 cut(s) 570, 663, 779
BstX2I RGATCY 1 cut(s) 189
BstYI RGATCY 1 cut(s) 189
BsuI GTATCC 1 cut(s) 897
BsuRI GGCC 2 cut(s) 100, 373
BtsCI GGATG 3 cut(s) 372, 466, 662
BtsIMutI CAGTG 3 cut(s) 27, 207, 242
Cac8I GCNNGC 2 cut(s) 111, 142
CaiI CAGNNNCTG 1 cut(s) 796
CciI TCATGA 1 cut(s) 76
CfoI GCGC 1 cut(s) 186
Cfr10I RCCGGY 1 cut(s) 907
CspAI ACCGGT 1 cut(s) 907
CspCI CAANNNNNGTGG 2 cut(s) 16, 51
CviAII CATG 5 cut(s) 77, 457, 783, 899, 936
DdeI CTNAG 3 cut(s) 479, 615, 1052
DpnI GATC 6 cut(s) 191, 242, 295, 432, 474, 818
DpnII GATC 6 cut(s) 189, 240, 293, 430, 472, 816
Eam1104I CTCTTC 4 cut(s) 246, 852, 1012, 1028
EarI CTCTTC 4 cut(s) 246, 852, 1012, 1028
Eco130I CCWWGG 1 cut(s) 307
Eco147I AGGCCT 1 cut(s) 373
Eco32I GATATC 1 cut(s) 121
Eco57I CTGAAG 2 cut(s) 773, 827
EcoRI GAATTC 1 cut(s) 272
EcoRII CCWGG 1 cut(s) 954
EcoRV GATATC 1 cut(s) 121
EcoT14I CCWWGG 1 cut(s) 307
ErhI CCWWGG 1 cut(s) 307
FaeI CATG 5 cut(s) 80, 460, 786, 902, 939
FatI CATG 5 cut(s) 76, 456, 782, 898, 935
FauNDI CATATG 2 cut(s) 160, 335
FbaI TGATCA 1 cut(s) 816
Fnu4HI GCNGC 5 cut(s) 11, 54, 206, 503, 857
FokI GGATG 3 cut(s) 379, 473, 669
Fsp4HI GCNGC 5 cut(s) 11, 54, 206, 503, 857
FspBI CTAG 2 cut(s) 450, 557
FspI TGCGCA 1 cut(s) 185
GlaI GCGC 1 cut(s) 185
GluI GCNGC 5 cut(s) 11, 54, 206, 503, 857
GsaI CCCAGC 1 cut(s) 656
GsuI CTGGAG 1 cut(s) 193
HaeIII GGCC 2 cut(s) 100, 373
HapII CCGG 2 cut(s) 116, 908
HhaI GCGC 1 cut(s) 186
Hin1II CATG 5 cut(s) 80, 460, 786, 902, 939
Hin6I GCGC 1 cut(s) 184
HinP1I GCGC 1 cut(s) 184
HinfI GANTC 3 cut(s) 227, 388, 399
HpaII CCGG 2 cut(s) 116, 908
HphI GGTGA 6 cut(s) 29, 288, 521, 754, 826, 922
Hpy166II GTNNAC 1 cut(s) 931
Hpy188I TCNGA 3 cut(s) 697, 807, 1076
Hpy188III TCNNGA 3 cut(s) 77, 116, 637
Hpy8I GTNNAC 1 cut(s) 931
HpyAV CCTTC 2 cut(s) 802, 935
HpyCH4III ACNGT 4 cut(s) 31, 627, 679, 1071
HpyCH4V TGCA 7 cut(s) 4, 10, 140, 155, 284, 631, 997
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 106, 141, 146, 192, 354, 511
HpyF3I CTNAG 3 cut(s) 479, 615, 1052
Hsp92II CATG 5 cut(s) 80, 460, 786, 902, 939
HspAI GCGC 1 cut(s) 184
Kpn2I TCCGGA 1 cut(s) 115
Ksp22I TGATCA 1 cut(s) 816
Kzo9I GATC 6 cut(s) 189, 240, 293, 430, 472, 816
LguI GCTCTTC 1 cut(s) 1012
LmnI GCTCC 4 cut(s) 118, 313, 464, 1031
Lsp1109I GCAGC 4 cut(s) 22, 192, 514, 843
LweI GCATC 1 cut(s) 93
MaeI CTAG 2 cut(s) 450, 557
MalI GATC 6 cut(s) 191, 242, 295, 432, 474, 818
MboI GATC 6 cut(s) 189, 240, 293, 430, 472, 816
MflI RGATCY 1 cut(s) 189
MluCI AATT 4 cut(s) 272, 584, 800, 1056
MlyI GAGTC 2 cut(s) 236, 393
MmeI TCCRAC 1 cut(s) 675
MroI TCCGGA 1 cut(s) 115
MroXI GAANNNNTTC 1 cut(s) 276
MseI TTAA 3 cut(s) 426, 527, 891
MslI CAYNNNNRTG 1 cut(s) 235
MspI CCGG 2 cut(s) 116, 908
MspR9I CCNGG 1 cut(s) 956
MvaI CCWGG 1 cut(s) 956
MwoI GCNNNNNNNGC 7 cut(s) 10, 106, 141, 146, 192, 354, 511
NdeI CATATG 2 cut(s) 160, 335
NdeII GATC 6 cut(s) 189, 240, 293, 430, 472, 816
NlaIII CATG 5 cut(s) 80, 460, 786, 902, 939
NsbI TGCGCA 1 cut(s) 185
NspI RCATGY 1 cut(s) 786
PagI TCATGA 1 cut(s) 76
PceI AGGCCT 1 cut(s) 373
PciI ACATGT 1 cut(s) 782
PciSI GCTCTTC 1 cut(s) 1012
PdmI GAANNNNTTC 1 cut(s) 276
PfeI GAWTC 1 cut(s) 388
PfoI TCCNGGA 1 cut(s) 954
PinAI ACCGGT 1 cut(s) 907
PkrI GCNGC 5 cut(s) 12, 55, 207, 504, 858
PleI GAGTC 2 cut(s) 235, 393
PpsI GAGTC 2 cut(s) 235, 393
PscI ACATGT 1 cut(s) 782
PshBI ATTAAT 1 cut(s) 891
Psp6I CCWGG 1 cut(s) 954
PspFI CCCAGC 1 cut(s) 652
PspGI CCWGG 1 cut(s) 954
PstNI CAGNNNCTG 1 cut(s) 796
PsuI RGATCY 1 cut(s) 189
RseI CAYNNNNRTG 1 cut(s) 235
SapI GCTCTTC 1 cut(s) 1012
SaqAI TTAA 3 cut(s) 426, 527, 891
SatI GCNGC 5 cut(s) 11, 54, 206, 503, 857
Sau3AI GATC 6 cut(s) 189, 240, 293, 430, 472, 816
SchI GAGTC 2 cut(s) 236, 393
ScrFI CCNGG 1 cut(s) 956
SfaNI GCATC 1 cut(s) 93
SmiMI CAYNNNNRTG 1 cut(s) 235
Sse9I AATT 4 cut(s) 272, 584, 800, 1056
SseBI AGGCCT 1 cut(s) 373
SsiI CCGC 5 cut(s) 54, 135, 195, 548, 812
SspMI CTAG 2 cut(s) 450, 557
StuI AGGCCT 1 cut(s) 373
StyD4I CCNGG 1 cut(s) 954
StyI CCWWGG 1 cut(s) 307
TaaI ACNGT 4 cut(s) 31, 627, 679, 1071
TaqI TCGA 5 cut(s) 215, 270, 402, 414, 774
TasI AATT 4 cut(s) 272, 584, 800, 1056
TauI GCSGC 1 cut(s) 56
TfiI GAWTC 1 cut(s) 388
Tru1I TTAA 3 cut(s) 426, 527, 891
Tru9I TTAA 3 cut(s) 426, 527, 891
TscAI CASTG 3 cut(s) 34, 207, 242
TseI GCWGC 4 cut(s) 10, 205, 502, 856
TspDTI ATGAA 3 cut(s) 265, 380, 792
TspRI CASTG 3 cut(s) 34, 207, 242
VspI ATTAAT 1 cut(s) 891
XapI RAATTY 3 cut(s) 272, 800, 1056
XceI RCATGY 1 cut(s) 786
XmnI GAANNNNTTC 1 cut(s) 276
XspI CTAG 2 cut(s) 450, 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.