Rorug05G0192500

Protein of unknown function (DUF674)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
18893549 .. 18894996
1448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0192500.1

Sequence Viewer

Length: 507 bp
ATGGCGGAGGAGGTTGTTGTTCTGGGCTTCTGGTCGAGCATGTTTGCCATGAGACCCAGAGTTGCTCTGACCGAGAAAGGGGTGGAGTATGAGTACAGAGAGGAGGACTTGCCCAACAAAACCTCACTGCTTCTGGAGATGAATCCGATCCACAAGAAAGTCCCCGTTCTTATCCACAACGGCAAACCCGTCTGTGAGTCGGCCAACATTGTCCAGTATATTGACGAGGCTTGGAAGGACAAAGGTCCTACTTTGCTTCCCTCTGATCCTTACCAGAGAGCTCAGGCCAGGTTCTGGGTTGATCACATTGATAAAAAGTTATATGAAGCTGGGACGAATATATGGTCCACAAAGGGAGAAGAACAAGAAGCAGCCAAGAAGGTTTTTTTTGGAAATCCTTCAGCTGTTGGAGGGAGAACTTGGGGACAAGACATACTTTGGGGGAGAGAGCTTTGGGTTCGTAGACATCAATCTTGTCACATTTTACTGTTGGTTTTTGACCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

168

Amino Acids

19.38

Weight (kDa)

6.22

Isoelectric Point (pI)

50.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 4.9e-20 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 10 - 77 1.1e-14 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 2.1e-13 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000148)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11145 AT3G09110 AT3G09120 AT3G09140 AT3G09140 AT5G01120 AT5G01130 AT5G01140 AT5G01150 AT5G37320 AT5G43240 AT5G43240 AT5G43240 AT5G43240
fragaria_vesca FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37570 FvH4_3g37580 FvH4_3g37580 FvH4_3g37590 FvH4_3g37590 FvH4_3g37590 FvH4_3g37601 FvH4_3g37610 FvH4_3g37610 FvH4_3g37640 FvH4_3g37640 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430 FvH4_6g48430
malus_domestica MD03G1079100.v1.1 MD03G1079200.v1.1 MD03G1079300.v1.1 MD03G1079500.v1.1 MD03G1079600.v1.1 MD03G1079700.v1.1 MD03G1079800.v1.1 MD11G1083300.v1.1 MD11G1083400.v1.1 MD11G1083500.v1.1 MD11G1083600.v1.1 MD11G1083700.v1.1 MD11G1083900.v1.1 MD11G1084000.v1.1 MD11G1084200.v1.1 MD11G1084300.v1.1
prunus_persica Prupe.1G077500_v2.0.a1 Prupe.6G063700_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063800_v2.0.a1 Prupe.6G063900_v2.0.a1 Prupe.6G064000_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064100_v2.0.a1 Prupe.6G064300_v2.0.a1 Prupe.6G064400_v2.0.a1
pyrus_communis pycom03g06310 pycom03g06320 pycom03g06330 pycom03g06340 pycom03g06350 pycom11g07140 pycom11g07160 pycom11g07170 pycom11g07190 pycom11g07200 pycom11g07230 pycom11g07240 pycom11g07250 pycom11g07260 pycom11g07270 pycom11g07280
rosa_chinensis RchiOBHm_Chr3g0490491 RchiOBHm_Chr5g0055481 RchiOBHm_Chr5g0067411 RchiOBHm_Chr5g0067441 RchiOBHm_Chr5g0067471 RchiOBHm_Chr5g0067491 RchiOBHm_Chr5g0067511 RchiOBHm_Chr5g0067521 RchiOBHm_Chr5g0067571 RchiOBHm_Chr5g0067581 RchiOBHm_Chr5g0067661 RchiOBHm_Chr5g0067671 RchiOBHm_Chr5g0067691 RchiOBHm_Chr5g0067721 RchiOBHm_Chr5g0067751 RchiOBHm_Chr5g0067801 RchiOBHm_Chr5g0067821 RchiOBHm_Chr5g0067831 RchiOBHm_Chr5g0067841 RchiOBHm_Chr5g0067861 RchiOBHm_Chr5g0067891 RchiOBHm_Chr5g0068351 RchiOBHm_Chr6g0278351
rosa_laevigata RLG00000013235 RLG00000022886 RLG00000035934 RLG00000035935 RLG00000035936 RLG00000035938 RLG00000035939 RLG00000035940 RLG00000035942 RLG00000035968
rosa_multiflora Rmu_sc0000230.1_g000001 Rmu_sc0000435.1_g000052 Rmu_sc0000435.1_g000053 Rmu_sc0000435.1_g000057 Rmu_sc0000435.1_g000067 Rmu_sc0000435.1_g000080 Rmu_sc0001016.1_g000006 Rmu_sc0001418.1_g000006 Rmu_sc0001418.1_g000008 Rmu_sc0002253.1_g000012 Rmu_sc0002253.1_g000013 Rmu_sc0002253.1_g000038 Rmu_sc0002253.1_g000039 Rmu_sc0002253.1_g000044 Rmu_sc0002489.1_g000055 Rmu_sc0003862.1_g000013 Rmu_sc0007131.1_g000003 Rmu_sc0007131.1_g000004 Rmu_sc0008054.1_g000001 Rmu_sc0009958.1_g000001 Rmu_sc0016063.1_g000001 Rmu_sc0022825.1_g000001
rosa_roxburghii Rroxscaffold_1G00012750 Rroxscaffold_1G00012810 Rroxscaffold_1G00012820 Rroxscaffold_1G00012860 Rroxscaffold_1G00012880 Rroxscaffold_1G00012920 Rroxscaffold_1G00012930 Rroxscaffold_1G00012940 Rroxscaffold_1G00013430 Rroxscaffold_1G00013440 Rroxscaffold_1G00013460 Rroxscaffold_1G00013510 Rroxscaffold_1G00013530 Rroxscaffold_1G00013550 Rroxscaffold_1G00013570 Rroxscaffold_1G00013580 Rroxscaffold_1G00013610 Rroxscaffold_1G00013620 Rroxscaffold_1G00013630 Rroxscaffold_1G00013680 Rroxscaffold_7G00190460
rosa_rugosa Rorug05G0192300 Rorug05G0192400 Rorug05G0192500 Rorug05G0192600 Rorug05G0192700 Rorug05G0384600 Rorug05G0385300 Rorug05G0385400 Rorug05G0385400 Rorug05G0385500 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385600 Rorug05G0385800 Rorug05G0386000 Rorug05G0389000 Rorug05G0389100 Rorug05G0397000 Rorug05G0397100
rosa_samantha Rh5BG461400 Rh5BG461600 Rh5BG461700 Rh5BG461900 Rh5BG462100 Rh6AG225700 Rh6AG225800
rosa_wichuraiana Rw0G017720 Rw3G025960 Rw5G041500 Rw5G041510 Rw5G041520 Rw5G041530 Rw5G041540 Rw5G041580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 294
AccI GTMKAC 1 cut(s) 463
AciI CCGC 1 cut(s) 5
AclWI GGATC 2 cut(s) 142, 260
AcoI YGGCCR 1 cut(s) 201
AcuI CTGAAG 1 cut(s) 384
AfaI GTAC 1 cut(s) 95
AfiI CCNNNNNNNGG 2 cut(s) 78, 294
AjnI CCWGG 1 cut(s) 287
AluBI AGCT 4 cut(s) 281, 329, 404, 451
AluI AGCT 4 cut(s) 281, 329, 404, 451
Alw21I GWGCWC 1 cut(s) 283
Alw26I GTCTC 1 cut(s) 46
AlwI GGATC 2 cut(s) 142, 260
AlwNI CAGNNNCTG 1 cut(s) 294
AoxI GGCC 2 cut(s) 201, 285
ApeKI GCWGC 1 cut(s) 371
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
Asp700I GAANNNNTTC 1 cut(s) 397
AspS9I GGNCC 2 cut(s) 245, 345
AvaII GGWCC 2 cut(s) 245, 345
BanII GRGCYC 1 cut(s) 283
Bbv12I GWGCWC 1 cut(s) 283
BbvI GCAGC 1 cut(s) 383
BceAI ACGGC 1 cut(s) 196
BciT130I CCWGG 1 cut(s) 289
BclI TGATCA 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 46
BisI GCNGC 1 cut(s) 372
BlsI GCNGC 1 cut(s) 373
Bme1390I CCNGG 1 cut(s) 289
Bme18I GGWCC 2 cut(s) 245, 345
BmgT120I GGNCC 2 cut(s) 245, 345
BmrFI CCNGG 1 cut(s) 289
BoxI GACNNNNGTC 1 cut(s) 243
BpmI CTGGAG 1 cut(s) 155
Bpu10I CCTNAGC 1 cut(s) 282
BsaI GGTCTC 1 cut(s) 46
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 2 cut(s) 78, 294
Bse1I ACTGG 1 cut(s) 214
BseBI CCWGG 1 cut(s) 289
BseLI CCNNNNNNNGG 2 cut(s) 78, 294
BseMII CTCAG 1 cut(s) 296
BseNI ACTGG 1 cut(s) 214
BseRI GAGGAG 2 cut(s) 23, 116
BseXI GCAGC 1 cut(s) 383
BseYI CCCAGC 1 cut(s) 329
BshFI GGCC 2 cut(s) 203, 287
BsiHKAI GWGCWC 1 cut(s) 283
BslFI GGGAC 3 cut(s) 146, 346, 438
BslI CCNNNNNNNGG 2 cut(s) 78, 294
BsmAI GTCTC 1 cut(s) 46
BsmFI GGGAC 3 cut(s) 146, 346, 438
BsnI GGCC 2 cut(s) 203, 287
Bso31I GGTCTC 1 cut(s) 46
Bsp1286I GDGCHC 1 cut(s) 283
Bsp143I GATC 3 cut(s) 147, 265, 301
BspACI CCGC 1 cut(s) 5
BspANI GGCC 2 cut(s) 203, 287
BspCNI CTCAG 1 cut(s) 295
BspPI GGATC 2 cut(s) 142, 260
BspTNI GGTCTC 1 cut(s) 46
BsrI ACTGG 1 cut(s) 214
BssMI GATC 3 cut(s) 147, 265, 301
Bst2UI CCWGG 1 cut(s) 289
Bst4CI ACNGT 1 cut(s) 489
BstDEI CTNAG 1 cut(s) 282
BstKTI GATC 3 cut(s) 150, 268, 304
BstMAI GTCTC 1 cut(s) 46
BstMBI GATC 3 cut(s) 147, 265, 301
BstNI CCWGG 1 cut(s) 289
BstNSI RCATGY 1 cut(s) 43
BstPAI GACNNNNGTC 1 cut(s) 243
BstSCI CCNGG 1 cut(s) 287
BstV1I GCAGC 1 cut(s) 383
BsuRI GGCC 2 cut(s) 203, 287
BtsI GCAGTG 1 cut(s) 125
BtsIMutI CAGTG 1 cut(s) 125
CaiI CAGNNNCTG 1 cut(s) 294
Cfr13I GGNCC 2 cut(s) 245, 345
Csp6I GTAC 1 cut(s) 94
CviAII CATG 2 cut(s) 40, 49
CviJI RGCY 9 cut(s) 27, 203, 230, 281, 287, 329, 374, 404, 451
CviKI_1 RGCY 9 cut(s) 27, 203, 230, 281, 287, 329, 374, 404, 451
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 1 cut(s) 282
DpnI GATC 3 cut(s) 149, 267, 303
DpnII GATC 3 cut(s) 147, 265, 301
EaeI YGGCCR 1 cut(s) 201
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 281
Eco24I GRGCYC 1 cut(s) 283
Eco31I GGTCTC 1 cut(s) 46
Eco47I GGWCC 2 cut(s) 245, 345
Eco53kI GAGCTC 1 cut(s) 281
Eco57I CTGAAG 1 cut(s) 384
EcoICRI GAGCTC 1 cut(s) 281
EcoO109I RGGNCCY 1 cut(s) 245
EcoRII CCWGG 1 cut(s) 287
EcoT38I GRGCYC 1 cut(s) 283
FaeI CATG 2 cut(s) 43, 52
FalI AAGNNNNNCTT 2 cut(s) 420, 452
FaqI GGGAC 3 cut(s) 146, 346, 438
FatI CATG 2 cut(s) 39, 48
FbaI TGATCA 1 cut(s) 301
FblI GTMKAC 1 cut(s) 463
Fnu4HI GCNGC 1 cut(s) 372
FriOI GRGCYC 1 cut(s) 283
Fsp4HI GCNGC 1 cut(s) 372
GluI GCNGC 1 cut(s) 372
GsaI CCCAGC 1 cut(s) 333
GsuI CTGGAG 1 cut(s) 155
HaeIII GGCC 2 cut(s) 203, 287
Hin1II CATG 2 cut(s) 43, 52
HinfI GANTC 2 cut(s) 142, 197
Hpy166II GTNNAC 2 cut(s) 348, 464
Hpy188I TCNGA 3 cut(s) 69, 147, 265
Hpy188III TCNNGA 1 cut(s) 134
Hpy8I GTNNAC 2 cut(s) 348, 464
HpyAV CCTTC 3 cut(s) 229, 373, 408
HpyCH4III ACNGT 1 cut(s) 489
HpyF3I CTNAG 1 cut(s) 282
Hsp92II CATG 2 cut(s) 43, 52
Ksp22I TGATCA 1 cut(s) 301
Kzo9I GATC 3 cut(s) 147, 265, 301
Lsp1109I GCAGC 1 cut(s) 383
MaeIII GTNAC 1 cut(s) 476
MalI GATC 3 cut(s) 149, 267, 303
MboI GATC 3 cut(s) 147, 265, 301
MboII GAAGA 1 cut(s) 371
MhlI GDGCHC 1 cut(s) 283
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 1 cut(s) 388
MnlI CCTC 7 cut(s) 4, 94, 97, 133, 220, 271, 404
MroXI GAANNNNTTC 1 cut(s) 397
MspA1I CMGCKG 1 cut(s) 404
MspR9I CCNGG 1 cut(s) 289
MvaI CCWGG 1 cut(s) 289
NdeII GATC 3 cut(s) 147, 265, 301
NlaIII CATG 2 cut(s) 43, 52
NmuCI GTSAC 1 cut(s) 476
NspI RCATGY 1 cut(s) 43
PcsI WCGNNNNNNNCGW 1 cut(s) 186
PdmI GAANNNNTTC 1 cut(s) 397
PfeI GAWTC 1 cut(s) 142
PflMI CCANNNNNTGG 1 cut(s) 294
PkrI GCNGC 1 cut(s) 373
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PpuMI RGGWCCY 1 cut(s) 245
PshAI GACNNNNGTC 1 cut(s) 243
Psp124BI GAGCTC 1 cut(s) 283
Psp5II RGGWCCY 1 cut(s) 245
Psp6I CCWGG 1 cut(s) 287
PspFI CCCAGC 1 cut(s) 329
PspGI CCWGG 1 cut(s) 287
PspPI GGNCC 2 cut(s) 245, 345
PspPPI RGGWCCY 1 cut(s) 245
PstNI CAGNNNCTG 1 cut(s) 294
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
SacI GAGCTC 1 cut(s) 283
SatI GCNGC 1 cut(s) 372
Sau3AI GATC 3 cut(s) 147, 265, 301
Sau96I GGNCC 2 cut(s) 245, 345
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 1 cut(s) 289
SduI GDGCHC 1 cut(s) 283
SinI GGWCC 2 cut(s) 245, 345
SsiI CCGC 1 cut(s) 5
SstI GAGCTC 1 cut(s) 283
StyD4I CCNGG 1 cut(s) 287
TaaI ACNGT 1 cut(s) 489
TaqI TCGA 1 cut(s) 35
TaqII GACCGA 1 cut(s) 86
TatI WGTACW 1 cut(s) 93
TfiI GAWTC 1 cut(s) 142
TscAI CASTG 1 cut(s) 132
TseFI GTSAC 1 cut(s) 476
TseI GCWGC 1 cut(s) 371
Tsp45I GTSAC 1 cut(s) 476
TspDTI ATGAA 2 cut(s) 155, 339
TspRI CASTG 1 cut(s) 132
Van91I CCANNNNNTGG 1 cut(s) 294
VpaK11BI GGWCC 2 cut(s) 245, 345
XceI RCATGY 1 cut(s) 43
XmiI GTMKAC 1 cut(s) 463
XmnI GAANNNNTTC 1 cut(s) 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.